CmoCh11G006070 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G006070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	mucin-17
Location	Cmo_Chr11: 2915914 .. 2916975 (-)
RNA-Seq Expression	CmoCh11G006070
Synteny	CmoCh11G006070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGAAGTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTGAGCCTTGCCTTTGTGTTGGGCCTTATTCTTGTGTTGCTTGCCGAGCTCTACTGCTCTCTGTTACTCCGACGCCGTAGGCTTCGTGTTGCACCGCCCACCACCACTTCCACCACCTCCTCCGCTCATCCTGTTGTAGCCGCCACCAACATTTCCCAGTCTCTGCCTTCAGCTGCTCCCAGGGACAACAACCGACCAGCTATTTCACTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCAAGAAACTTTCTTTTCCCCTCTGTCCCCTGTATCAAAGACAACAATGTAGATGTTGTTGAAGCAAAGAGCCGAAGCACTCAACTTCATCGAGTTATCGACATTGATGCCCATGAATCGTCCCTTAGCCCTCACCGAATCGGCCTCATTTCAACTCCATCCCGCCCGCCGTCACCCTTCATCTCAGCCTCGCCTGACCTATCTGTTTCTAAAGTTTGTGCTCAGAGTAAATTAAGCCCTGCCATTGCCTGTAATGACAGTTCTTCCATTGGCAGTGACCATTTTATGTACATTTCAAATCCGATTTATGACAATGATGCAATCAGGCCAAGCAGAGGAGACACCCCATTCGAAACACCAAATTCCTCTCCTTCAAGATTGGAAACATGTGGTTCTTCTGAAGAAGACGAGATTGTAGCTTCTCCTCCAAGTACTCTTCGTTCCCTCCCAAATACACCACCTTTAACGCCAATGAAGAAGCTCCCAGCCGAGGCTTGTTCGGTTACATTGAGAGACGCCACGTCTCTGAGGAATTCTGGAAGCGATTCTAACACTAACAATGGTCTATCATCTTCCTCCTCTGGTTCTCCCTGTACTTCACCTTCATGGTAATGTAATTCAATGGCACGTTTAGAGTTAGTGTGATGCCAGAGTTTTCTTTACAGCTTTGTTGTGAAACTTAACTTTCTATGGTGGTGGTGGGTATGTTTTGAATGTGGTAGTGAAGAAGAAGAAGAAGAAAGTAGCGAGTTTCTCAAAGCACTGGTCTGA

mRNA sequence

ATGCAGGGAAGTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTGAGCCTTGCCTTTGTGTTGGGCCTTATTCTTGTGTTGCTTGCCGAGCTCTACTGCTCTCTGTTACTCCGACGCCGTAGGCTTCGTGTTGCACCGCCCACCACCACTTCCACCACCTCCTCCGCTCATCCTGTTGTAGCCGCCACCAACATTTCCCAGTCTCTGCCTTCAGCTGCTCCCAGGGACAACAACCGACCAGCTATTTCACTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCAAGAAACTTTCTTTTCCCCTCTGTCCCCTGTATCAAAGACAACAATGTAGATGTTGTTGAAGCAAAGAGCCGAAGCACTCAACTTCATCGAGTTATCGACATTGATGCCCATGAATCGTCCCTTAGCCCTCACCGAATCGGCCTCATTTCAACTCCATCCCGCCCGCCGTCACCCTTCATCTCAGCCTCGCCTGACCTATCTGTTTCTAAAGTTTGTGCTCAGAGTAAATTAAGCCCTGCCATTGCCTGTAATGACAGTTCTTCCATTGGCAGTGACCATTTTATGTACATTTCAAATCCGATTTATGACAATGATGCAATCAGGCCAAGCAGAGGAGACACCCCATTCGAAACACCAAATTCCTCTCCTTCAAGATTGGAAACATGTGGTTCTTCTGAAGAAGACGAGATTGTAGCTTCTCCTCCAAGTACTCTTCGTTCCCTCCCAAATACACCACCTTTAACGCCAATGAAGAAGCTCCCAGCCGAGGCTTGTTCGGTTACATTGAGAGACGCCACGTCTCTGAGGAATTCTGGAAGCGATTCTAACACTAACAATGGTCTATCATCTTCCTCCTCTGGTTCTCCCTGTACTTCACCTTCATGTGAAGAAGAAGAAGAAGAAAGTAGCGAGTTTCTCAAAGCACTGGTCTGA

Coding sequence (CDS)

ATGCAGGGAAGTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTGAGCCTTGCCTTTGTGTTGGGCCTTATTCTTGTGTTGCTTGCCGAGCTCTACTGCTCTCTGTTACTCCGACGCCGTAGGCTTCGTGTTGCACCGCCCACCACCACTTCCACCACCTCCTCCGCTCATCCTGTTGTAGCCGCCACCAACATTTCCCAGTCTCTGCCTTCAGCTGCTCCCAGGGACAACAACCGACCAGCTATTTCACTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCAAGAAACTTTCTTTTCCCCTCTGTCCCCTGTATCAAAGACAACAATGTAGATGTTGTTGAAGCAAAGAGCCGAAGCACTCAACTTCATCGAGTTATCGACATTGATGCCCATGAATCGTCCCTTAGCCCTCACCGAATCGGCCTCATTTCAACTCCATCCCGCCCGCCGTCACCCTTCATCTCAGCCTCGCCTGACCTATCTGTTTCTAAAGTTTGTGCTCAGAGTAAATTAAGCCCTGCCATTGCCTGTAATGACAGTTCTTCCATTGGCAGTGACCATTTTATGTACATTTCAAATCCGATTTATGACAATGATGCAATCAGGCCAAGCAGAGGAGACACCCCATTCGAAACACCAAATTCCTCTCCTTCAAGATTGGAAACATGTGGTTCTTCTGAAGAAGACGAGATTGTAGCTTCTCCTCCAAGTACTCTTCGTTCCCTCCCAAATACACCACCTTTAACGCCAATGAAGAAGCTCCCAGCCGAGGCTTGTTCGGTTACATTGAGAGACGCCACGTCTCTGAGGAATTCTGGAAGCGATTCTAACACTAACAATGGTCTATCATCTTCCTCCTCTGGTTCTCCCTGTACTTCACCTTCATGTGAAGAAGAAGAAGAAGAAAGTAGCGAGTTTCTCAAAGCACTGGTCTGA

Protein sequence

MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHPVVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAKSRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIACNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSCEEEEEESSEFLKALV

Homology

[Close]

BLAST of CmoCh11G006070 vs. ExPASy TrEMBL
Match: A0A6J1EZ13 (uncharacterized protein LOC111437716 OS=Cucurbita moschata OX=3662 GN=LOC111437716 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.6e-154
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120
           VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 300
           STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS
Sbjct: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 299

[Close]

BLAST of CmoCh11G006070 vs. ExPASy TrEMBL
Match: A0A6J1KR73 (uncharacterized protein LOC111497542 OS=Cucurbita maxima OX=3661 GN=LOC111497542 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.4e-152
Identity = 296/299 (99.00%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRR RLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRCRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120
           VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDND IRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDGIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 300
           ST+RSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS
Sbjct: 241 STIRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 299

[Close]

BLAST of CmoCh11G006070 vs. ExPASy TrEMBL
Match: A0A5A7TU56 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001330 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.2e-126
Identity = 259/303 (85.48%), Postives = 272/303 (89.77%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQG+SKVILGATLIMVVSLA VLGLILVLLAELYCSLLLRRRRLRVAPPTTTS+  S  P
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLSGDP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVV--- 120
           V  ATNISQSLPSA   DNNR AISLSSLYAHGVLSAPRNFLFP+VPC+KDNNVD V   
Sbjct: 61  VATATNISQSLPSAPRGDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSP 180
           EAKS+++QLHR+IDID  ESSLSP RIGLISTPS P SP ISASPD+S+ K CAQSKLSP
Sbjct: 121 EAKSQNSQLHRIIDIDTLESSLSPRRIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSIGSDHFMYISNPIYDNDAIRPSRGD-TPFETPNSSPSRLETCGSSEEDEIV 240
           AIACNDSSS GSDHFMYISNPIYDNDAIRPSRGD TPFETP+SSPSRLE C SSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGDNTPFETPSSSPSRLERCSSSEEDEIV 240

Query: 241 ASPPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCT 300
           ASP ST+ SLPNTPPLTPMKKLPAEACSVTLRDA SL NSGSDSNT+NGLSSSSSGSPCT
Sbjct: 241 ASPSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

[Close]

BLAST of CmoCh11G006070 vs. ExPASy TrEMBL
Match: A0A1S3CJ56 (uncharacterized protein LOC103501549 OS=Cucumis melo OX=3656 GN=LOC103501549 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.2e-126
Identity = 259/303 (85.48%), Postives = 272/303 (89.77%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQG+SKVILGATLIMVVSLA VLGLILVLLAELYCSLLLRRRRLRVAPPTTTS+  S  P
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLSGDP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVV--- 120
           V  ATNISQSLPSA   DNNR AISLSSLYAHGVLSAPRNFLFP+VPC+KDNNVD V   
Sbjct: 61  VATATNISQSLPSAPRGDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSP 180
           EAKS+++QLHR+IDID  ESSLSP RIGLISTPS P SP ISASPD+S+ K CAQSKLSP
Sbjct: 121 EAKSQNSQLHRIIDIDTLESSLSPRRIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSIGSDHFMYISNPIYDNDAIRPSRGD-TPFETPNSSPSRLETCGSSEEDEIV 240
           AIACNDSSS GSDHFMYISNPIYDNDAIRPSRGD TPFETP+SSPSRLE C SSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGDNTPFETPSSSPSRLERCSSSEEDEIV 240

Query: 241 ASPPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCT 300
           ASP ST+ SLPNTPPLTPMKKLPAEACSVTLRDA SL NSGSDSNT+NGLSSSSSGSPCT
Sbjct: 241 ASPSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

[Close]

BLAST of CmoCh11G006070 vs. ExPASy TrEMBL
Match: A0A5D3BN01 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00580 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 5.0e-126
Identity = 258/303 (85.15%), Postives = 272/303 (89.77%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQG+SKVILGATLIMVVSLA VLGLILVLLAELYCSLLLRRRRLRVAPPTTTS+  S  P
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLSGDP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVV--- 120
           V  ATNISQSLPSA   DNNR AISLSSLYAHGVLSAPRN+LFP+VPC+KDNNVD V   
Sbjct: 61  VATATNISQSLPSAPRGDNNRSAISLSSLYAHGVLSAPRNYLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSP 180
           EAKS+++QLHR+IDID  ESSLSP RIGLISTPS P SP ISASPD+S+ K CAQSKLSP
Sbjct: 121 EAKSQNSQLHRIIDIDTLESSLSPRRIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSIGSDHFMYISNPIYDNDAIRPSRGD-TPFETPNSSPSRLETCGSSEEDEIV 240
           AIACNDSSS GSDHFMYISNPIYDNDAIRPSRGD TPFETP+SSPSRLE C SSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGDNTPFETPSSSPSRLERCSSSEEDEIV 240

Query: 241 ASPPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCT 300
           ASP ST+ SLPNTPPLTPMKKLPAEACSVTLRDA SL NSGSDSNT+NGLSSSSSGSPCT
Sbjct: 241 ASPSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

[Close]

BLAST of CmoCh11G006070 vs. NCBI nr
Match: XP_022931558.1 (uncharacterized protein LOC111437716 [Cucurbita moschata])

HSP 1 Score: 553.5 bits (1425), Expect = 1.2e-153
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120
           VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 300
           STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS
Sbjct: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 299

[Close]

BLAST of CmoCh11G006070 vs. NCBI nr
Match: KAG6587952.1 (hypothetical protein SDJN03_16517, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 550.1 bits (1416), Expect = 1.3e-152
Identity = 297/299 (99.33%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120
           VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKD+NVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120

Query: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           S+STQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 300
           STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS
Sbjct: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 299

[Close]

BLAST of CmoCh11G006070 vs. NCBI nr
Match: KAG7021842.1 (hypothetical protein SDJN02_15570, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548.1 bits (1411), Expect = 4.9e-152
Identity = 296/299 (99.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120
           VVAAT+ISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKD+NVDVVEAK
Sbjct: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120

Query: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           S+STQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 300
           STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS
Sbjct: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 299

[Close]

BLAST of CmoCh11G006070 vs. NCBI nr
Match: XP_023004116.1 (uncharacterized protein LOC111497542 [Cucurbita maxima])

HSP 1 Score: 548.1 bits (1411), Expect = 4.9e-152
Identity = 296/299 (99.00%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRR RLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRCRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120
           VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDND IRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDGIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 300
           ST+RSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS
Sbjct: 241 STIRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 299

[Close]

BLAST of CmoCh11G006070 vs. NCBI nr
Match: XP_023530777.1 (uncharacterized protein LOC111793226 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 540.4 bits (1391), Expect = 1.0e-149
Identity = 294/299 (98.33%), Postives = 295/299 (98.66%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPP   STTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPP---STTSSAHP 60

Query: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120
           VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPP PFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPPPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 300
           ST+RSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS
Sbjct: 241 STIRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPS 296

[Close]

BLAST of CmoCh11G006070 vs. TAIR 10
Match: AT3G29300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to 349 proteins in 91 species: Archae - 0; Bacteria - 85; Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 8.6e-22
Identity = 109/301 (36.21%), Postives = 141/301 (46.84%), Query Frame = 0


Query: 9   LGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHPVVAATNIS 68
           + ATL+MVVSL  VL L+LVLLAELYCSLLLRRRR        T+T S+A      T ++
Sbjct: 1   MAATLVMVVSLVMVLSLVLVLLAELYCSLLLRRRRHNSLNLPITTTVSTA--ARTTTTLN 60

Query: 69  QSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAKSRSTQLHR 128
           Q++ S    DN  P+                                             
Sbjct: 61  QAI-STTSNDNTSPS--------------------------------------------- 120

Query: 129 VIDIDAHESSLSPHRIGLISTPSRP---PSPFISASPDLSVSKVCAQSKLSPAIACNDSS 188
               + + SS +P   G+I TP++      P++ AS DL    +            NDS 
Sbjct: 121 ----NINSSSPNPLYTGVIQTPTKTHYNHEPYLQASLDLIQETI-----------VNDS- 180

Query: 189 SIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLET-------CGSSEEDEIVAS 248
               D+F+YISNP+Y NDA   S+  TPFETP SSPSRLET        G  + D I+  
Sbjct: 181 ---VDNFIYISNPMYSNDA--TSKPTTPFETPESSPSRLETGESSSSSSGEEDNDHIIE- 212

Query: 249 PPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSP 300
                    +TP LTPMK LP +ACSV+L+   ++  S S+SN        SSGSP TSP
Sbjct: 241 --------VSTPTLTPMKDLPEKACSVSLK---NVETSASESN--------SSGSPYTSP 212

The following BLAST results are available for this feature:

BLAST of CmoCh11G006070 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G006070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZ13	5.6e-154	100.00	uncharacterized protein LOC111437716 OS=Cucurbita moschata OX=3662 GN=LOC1114377...	[more]
A0A6J1KR73	2.4e-152	99.00	uncharacterized protein LOC111497542 OS=Cucurbita maxima OX=3661 GN=LOC111497542...	[more]
A0A5A7TU56	2.2e-126	85.48	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3CJ56	2.2e-126	85.48	uncharacterized protein LOC103501549 OS=Cucumis melo OX=3656 GN=LOC103501549 PE=...	[more]
A0A5D3BN01	5.0e-126	85.15	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of CmoCh11G006070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931558.1	1.2e-153	100.00	uncharacterized protein LOC111437716 [Cucurbita moschata]	[more]
KAG6587952.1	1.3e-152	99.33	hypothetical protein SDJN03_16517, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021842.1	4.9e-152	99.00	hypothetical protein SDJN02_15570, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023004116.1	4.9e-152	99.00	uncharacterized protein LOC111497542 [Cucurbita maxima]	[more]
XP_023530777.1	1.0e-149	98.33	uncharacterized protein LOC111793226 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh11G006070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29300.1	8.6e-22	36.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G006070.1	CmoCh11G006070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane