CmoCh11G005700 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACCATGAAGAACAACTTCAACCCGACGCCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCGCCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACCATGAAGAACAACTTCAACCCGACGCCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCGCCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACCATGAAGAACAACTTCAACCCGACGCCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCGCCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEQLQPDAVSLSKELRTCRSVGSTATSEGTRSSAVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH Homology
BLAST of CmoCh11G005700 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06 Identity = 45/129 (34.88%), Postives = 64/129 (49.61%), Query Frame = 0
BLAST of CmoCh11G005700 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06 Identity = 41/128 (32.03%), Postives = 54/128 (42.19%), Query Frame = 0
BLAST of CmoCh11G005700 vs. ExPASy TrEMBL
Match: A0A6J1F5J7 (uncharacterized protein At1g15400-like OS=Cucurbita moschata OX=3662 GN=LOC111441031 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 7.9e-61 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CmoCh11G005700 vs. ExPASy TrEMBL
Match: A0A6J1HNM7 (uncharacterized protein At1g15400-like OS=Cucurbita maxima OX=3661 GN=LOC111465235 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 4.8e-58 Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of CmoCh11G005700 vs. ExPASy TrEMBL
Match: A0A6J1JFP4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111485313 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39 Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 0
BLAST of CmoCh11G005700 vs. ExPASy TrEMBL
Match: A0A6J1H9E8 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111461328 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.8e-39 Identity = 87/118 (73.73%), Postives = 97/118 (82.20%), Query Frame = 0
BLAST of CmoCh11G005700 vs. ExPASy TrEMBL
Match: A0A5A7TZI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00370 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 6.8e-36 Identity = 84/119 (70.59%), Postives = 92/119 (77.31%), Query Frame = 0
BLAST of CmoCh11G005700 vs. NCBI nr
Match: XP_022933695.1 (uncharacterized protein At1g15400-like [Cucurbita moschata]) HSP 1 Score: 242.7 bits (618), Expect = 1.6e-60 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CmoCh11G005700 vs. NCBI nr
Match: KAG6587920.1 (hypothetical protein SDJN03_16485, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021805.1 hypothetical protein SDJN02_15533, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 239.2 bits (609), Expect = 1.8e-59 Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of CmoCh11G005700 vs. NCBI nr
Match: XP_023530960.1 (uncharacterized protein At1g15400-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 235.3 bits (599), Expect = 2.6e-58 Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of CmoCh11G005700 vs. NCBI nr
Match: XP_022965353.1 (uncharacterized protein At1g15400-like [Cucurbita maxima]) HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57 Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of CmoCh11G005700 vs. NCBI nr
Match: XP_023516734.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.1 bits (440), Expect = 7.2e-40 Identity = 86/117 (73.50%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of CmoCh11G005700 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 6.3e-10 Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 0
BLAST of CmoCh11G005700 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 7.7e-08 Identity = 45/129 (34.88%), Postives = 64/129 (49.61%), Query Frame = 0
BLAST of CmoCh11G005700 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 7.7e-08 Identity = 45/129 (34.88%), Postives = 64/129 (49.61%), Query Frame = 0
BLAST of CmoCh11G005700 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 7.7e-08 Identity = 45/129 (34.88%), Postives = 64/129 (49.61%), Query Frame = 0
BLAST of CmoCh11G005700 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07 Identity = 41/128 (32.03%), Postives = 54/128 (42.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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