CmoCh11G004700 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G004700
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	BHLH domain-containing protein
Location	Cmo_Chr11: 2301693 .. 2305723 (-)
RNA-Seq Expression	CmoCh11G004700
Synteny	CmoCh11G004700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGAAAGCAATGGTGGTGCGCCAGAGAGAAACTCCACCTTTTGCTATTTAATAATCGAACCCTCGACTCTCCACACCAAATTCAATTCCCTCCGCCGTCTTCTTCCTCTTCCTCCGCCACTCCGCAGGCGACGATGCAGCCCTGTAGCAGAGAAATGGAAACCCTCAACTCTCTTTTAAACAACTCCCAAATCTCCCTTCAGGATCTCCATGGCGACGACCACCACCTGAATCCGCCGTCGGAGCAGATTCCGGGGTCTCAGCTCCACCATTTCGATCCGGTGGCTGCCGCCTCTCACGATGACTTCCTCGAGCAAATGCTTCATACAATCCCATCCTGTTCGTGGCCGGACCTCAACCCTTCAAACCCTAAATCCCCGTGGGACATTAACCCCATCAATAAGCCATCCAGAGATATCTCCGACACCTCTCCCGCTGCAAAGGCAGCCGTTATGCTCCAGCAACAGCTTCTATTGTCCAGAGGCATATCCTCTGTCGCCGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTAGTAATGCCGATTTGGACCGCTCCCACAACGACATCGTCGACAGATCCTGCTTCCGGCCACCAAACTCGGTTAGTTCTGTGCTGGATCTTTCAATTCCTCGCCGGCGTTATTCATGCTTCAACACTCTGTTTTTCAGGGAGGTGGTATTCAATCGCATAGTTTCGGAGCTCAAGGAAACATGATGAATCAAGCTCCGGACGGTGGGTCCGGCGGAATCTCTCCATCTCAGCCGAAGCAGAAAGTCAGAGCTCGCAGGGGGCAAGCTACAGACCCCCACAGTATCGCGGAAAGGGTAAACTAAAATTTCCCCATAATTATTCAAATCTCTAACTCTGTTTGACTAAACCCACTAAGTCATCTTCATTCTCAGTATTTTCCGGCTGAAAAAAATGGATTACCCATTTTTCTTCGTTGTGTTCTCGTTTGTTTTGGGTTGACCCCGAATGCACGTTTGAACAGAAACATTTGGTTAATTGAATTTTTTGTCTGGTTCTTCGTGTTATAGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTGGTTCCCAACGCAAACAAGGTCATTTTCTTCCTTCTTCTTCATCTTCTTCCCTAATTAATTTATCCCAAAATTTAACAACTCTTTACTAAGTTCAAATCAACCGTAATTTAGCAAACTGATCAGGGGCATTATGGTCATTAGTACAACGCGTTGACGGTGAGAGATTTATGTATTGGCAAATGAGGGACACGTGTCGTCAGTGTAATGTGGCAGTTACTAACAAAATGACGAGCATGTAATTATTAGCAAAACTTTTTTTTTTTTTTTTTTGTTAATAAATTTTTATGTTTATTTTTGCTTTCGTTGTATAAGAAAAAGAGGGAGGATTAAATAGGAAAAGCAAAGTTAATTAATGGGGAAATTGAAATTAATTAATTAATTAATTAATGGTAATGAATCTGATTAGTTGGGGTTTGGAATTCCAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAATTCCTACAGCTCCAAGTCAAGGTTTGGCCCTATACCTTTAAATATATATATATATATATATACATATATGCATAGTTTATTCTAATTATTAAATGTAATTAATTAATATATGTATATATTGAAAAAGATTCCCTGTGCGGTATTTAATTTAATATTGTAAATGAGTTTTATTATTTTAATTTCTCTTATTATTCGGTGTAGGTTCTGAGCATGAGCAGGTTAGGGGGTGCAGCTGCTGTTGCTCCTCTTGGTGCTGACGTGTCCGCTGAGGCCAGCTCTCTCAAAGTCAAAATTACCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGCGAGGATAATTATGATTTATTATGGGTTTAATTAAAAAGGATTGGAAAGTAACAAATTGTAAAATTATTTCAAACATCTAAAAATAAAATTTAAACGGCACAAATTTACTTTTAGCAGAAGACGACAAAAGGAAAAGGGCAGCACGCGTGCGGGAACTTTTATCAGCTTTCTTTCTTTTTGGTTTGCCTGTCGTTTTCGTTTCTAATTGATGAAACGGTGTCGCTTCAGGGTGGTGGTGAGTGTATGCAAGGTGGGCGGAGTTCAAACGGCAGCGGAGGAAACCAAACGGCGTCGTCGAACGACAGCGTGACGGTGACGGAGCAGCAGGTGGCGAGGCTGATGGAGAAGGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGACTCTGTCTTATGCCGATATCACTGGCAACGGCGATTTCGACGTCCACGTGTCCCTCGAGGAATCCGATTATCAACGGCAGCGGCGGGCACCACCCAATGATGGGATCAAACGGCGAAGGGCCGTCGTCGCCGAGCATGTCGGTGTTAACAGTGCAGTCGACGAGCATGGGAAACGGATCCGTCAAGGACGCGGCCTCCGATTGACTGACTTTTTTATTAATATTTTTGTTTGATAAGAAAGCAGTCAACTACTATAGAAGTCTTCAATGAAAAATAAGGCATCTTTCTCAATACGGCGCCGTATTTTTTGTGGGTTTCTGTGGGGTGGCCTAAAAAGCAAAGGCAAAGGCAAAGGTATTTCCTTCTGACATCAAAAGCTTCTCCTTTACACCACATCCTAAGAAGCCCCCCCCCCTTTTCCTTTCCTTTTATTTATGAGTTTAATTAAACCAATTTTTGCTTAATTTGCTTTAGTTTATGTTCTAAAATCAGTCATGAATAATGAATAATAATAAGAGGGAGTTGCTTACAAATCATGTTACTTCTGAAAATGGCTTTTTTTTTTTTTGTTTTCGGAATGGGTTTACTATAGGAGGAATTAAGTATAACGTTGATTTGTTTAATCCTTACTATTTCAACTAATAAAACCAATCAGTTTTGGCTTTATTCATTAATCTCCCAACACTAAAGCTTTTCTTTTCTAAAAGATAGGATATTGATTTAACTTTTTTTTTTTTTAATGACCTTTCCAGAATGTTTACAAAATATTAACATAATCCATAATAATAATAATGAAAAAAGTATTAAAACCTAGTTCTTTTATTTGCTTTAATTATATATATATATATATATATATATATATATATATATATATATATAAAGAATCAAATAATTGTAGAATAGTCTTTGGTAATGGATAAAAGGATGTTCCTACTTTTCTTTTTTTTTTAAAAAAAAAGGAAATGGTAGCTTTAGATAATGATGTTAGCTCAATCCCAAATACAAACAAAAATTTATTAATACTCGGCTGAGAATAAATTTATATCCCATGTTGTTTTTCTCAACCAAAAGTATGCAAAATCATGGTTGAATGAATTAACAAATAATATCTTCAATTTTGACTTTGAACTCGCCTTTCTTTTTAATTAAACCCCTTGATAAGGAGAGGAAAACGATTAAACATGTAGTTCACTACTCTTAAAAGTAACCATAGTTGAGTTATATCTTCCATCAAAGGTTAACTATTTGAAACTTTATTAAAGAAATTATTCAAATCAATAGAGATTAAAAAAAAAATTACTTGGAGAATAATCCTAAAATCCAATTCCCACAAATTCCCTTGCAGATAATTTTGTCTCAAATGGATGGGATACACCCCATGGACGACACATCTCTATTCACGAAAAGAGTCTCCAAACAACTTGTACACCTCAAACTAATTCCTAATACAAATCCTGTTGTTGTGCACATCCTATCTGAGATGTGTGGATCAGATTTTACGGCATTGTTCAATTATCATATGACACAACGAGGGGAAGTTCTAACATCGAATCTATTGTAGCCCTCCCTAAATAATATATGTGCATATCTATGTTCTTAAGAAACAAACAGGAAGGCCGCCTTGGGGCAAGGACTTGAGGGAACCCCTCCCCAAACAGAAGAACTAACACAAAAAGGCCTCCAATTTCTAATGATCATGCCAAGGCTGTAGGTACATCAAAATTCTATGCGACTTCAACTCCCGCCAAGAAGCCG

mRNA sequence

TGAGAAAGCAATGGTGGTGCGCCAGAGAGAAACTCCACCTTTTGCTATTTAATAATCGAACCCTCGACTCTCCACACCAAATTCAATTCCCTCCGCCGTCTTCTTCCTCTTCCTCCGCCACTCCGCAGGCGACGATGCAGCCCTGTAGCAGAGAAATGGAAACCCTCAACTCTCTTTTAAACAACTCCCAAATCTCCCTTCAGGATCTCCATGGCGACGACCACCACCTGAATCCGCCGTCGGAGCAGATTCCGGGGTCTCAGCTCCACCATTTCGATCCGGTGGCTGCCGCCTCTCACGATGACTTCCTCGAGCAAATGCTTCATACAATCCCATCCTGTTCGTGGCCGGACCTCAACCCTTCAAACCCTAAATCCCCGTGGGACATTAACCCCATCAATAAGCCATCCAGAGATATCTCCGACACCTCTCCCGCTGCAAAGGCAGCCGTTATGCTCCAGCAACAGCTTCTATTGTCCAGAGGCATATCCTCTGTCGCCGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTAGTAATGCCGATTTGGACCGCTCCCACAACGACATCGTCGACAGATCCTGCTTCCGGCCACCAAACTCGGGAGGTGGTATTCAATCGCATAGTTTCGGAGCTCAAGGAAACATGATGAATCAAGCTCCGGACGGTGGGTCCGGCGGAATCTCTCCATCTCAGCCGAAGCAGAAAGTCAGAGCTCGCAGGGGGCAAGCTACAGACCCCCACAGTATCGCGGAAAGGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTGGTTCCCAACGCAAACAAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAATTCCTACAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTAGGGGGTGCAGCTGCTGTTGCTCCTCTTGGTGCTGACGTGTCCGCTGAGGCCAGCTCTCTCAAAGGTGGTGGTGAGTGTATGCAAGGTGGGCGGAGTTCAAACGGCAGCGGAGGAAACCAAACGGCGTCGTCGAACGACAGCGTGACGGTGACGGAGCAGCAGGTGGCGAGGCTGATGGAGAAGGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGACTCTGTCTTATGCCGATATCACTGGCAACGGCGATTTCGACGTCCACGTGTCCCTCGAGGAATCCGATTATCAACGGCAGCGGCGGGCACCACCCAATGATGGGATCAAACGGCGAAGGGCCGTCGTCGCCGAGCATGTCGGTGTTAACAGTGCAGTCGACGAGCATGGGAAACGGATCCGTCAAGGACGCGGCCTCCGATTGACTGACTTTTTTATTAATATTTTTGTTTGATAAGAAAGCAGTCAACTACTATAGAAGTCTTCAATGAAAAATAAGGCATCTTTCTCAATACGGCGCCGTATTTTTTGTGGGTTTCTGTGGGGTGGCCTAAAAAGCAAAGGCAAAGGCAAAGATAATTTTGTCTCAAATGGATGGGATACACCCCATGGACGACACATCTCTATTCACGAAAAGAGTCTCCAAACAACTTGTACACCTCAAACTAATTCCTAATACAAATCCTGTTGTTGTGCACATCCTATCTGAGATGTGTGGATCAGATTTTACGGCATTGTTCAATTATCATATGACACAACGAGGGGAAGTTCTAACATCGAATCTATTGTAGCCCTCCCTAAATAATATATGTGCATATCTATGTTCTTAAGAAACAAACAGGAAGGCCGCCTTGGGGCAAGGACTTGAGGGAACCCCTCCCCAAACAGAAGAACTAACACAAAAAGGCCTCCAATTTCTAATGATCATGCCAAGGCTGTAGGTACATCAAAATTCTATGCGACTTCAACTCCCGCCAAGAAGCCG

Coding sequence (CDS)

ATGCAGCCCTGTAGCAGAGAAATGGAAACCCTCAACTCTCTTTTAAACAACTCCCAAATCTCCCTTCAGGATCTCCATGGCGACGACCACCACCTGAATCCGCCGTCGGAGCAGATTCCGGGGTCTCAGCTCCACCATTTCGATCCGGTGGCTGCCGCCTCTCACGATGACTTCCTCGAGCAAATGCTTCATACAATCCCATCCTGTTCGTGGCCGGACCTCAACCCTTCAAACCCTAAATCCCCGTGGGACATTAACCCCATCAATAAGCCATCCAGAGATATCTCCGACACCTCTCCCGCTGCAAAGGCAGCCGTTATGCTCCAGCAACAGCTTCTATTGTCCAGAGGCATATCCTCTGTCGCCGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTAGTAATGCCGATTTGGACCGCTCCCACAACGACATCGTCGACAGATCCTGCTTCCGGCCACCAAACTCGGGAGGTGGTATTCAATCGCATAGTTTCGGAGCTCAAGGAAACATGATGAATCAAGCTCCGGACGGTGGGTCCGGCGGAATCTCTCCATCTCAGCCGAAGCAGAAAGTCAGAGCTCGCAGGGGGCAAGCTACAGACCCCCACAGTATCGCGGAAAGGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTGGTTCCCAACGCAAACAAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAATTCCTACAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTAGGGGGTGCAGCTGCTGTTGCTCCTCTTGGTGCTGACGTGTCCGCTGAGGCCAGCTCTCTCAAAGGTGGTGGTGAGTGTATGCAAGGTGGGCGGAGTTCAAACGGCAGCGGAGGAAACCAAACGGCGTCGTCGAACGACAGCGTGACGGTGACGGAGCAGCAGGTGGCGAGGCTGATGGAGAAGGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGACTCTGTCTTATGCCGATATCACTGGCAACGGCGATTTCGACGTCCACGTGTCCCTCGAGGAATCCGATTATCAACGGCAGCGGCGGGCACCACCCAATGATGGGATCAAACGGCGAAGGGCCGTCGTCGCCGAGCATGTCGGTGTTAACAGTGCAGTCGACGAGCATGGGAAACGGATCCGTCAAGGACGCGGCCTCCGATTGA

Protein sequence

MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLEQMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISSVADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQTASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD

Homology

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BLAST of CmoCh11G004700 vs. ExPASy Swiss-Prot
Match: D0PX88 (bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.7e-81
Identity = 208/382 (54.45%), Postives = 249/382 (65.18%), Query Frame = 0


Query: 47  FDPVAAASHDDFLEQMLHTIPSCSWPDLNPSNPKSPWDI--------NPINKPSRDISDT 106
           FDP    SHDDFLEQML T+PS   P+ + S   +P ++        + +N   R+   T
Sbjct: 12  FDP---TSHDDFLEQMLSTLPSFWDPNSDLSAETTPDNVAAFPFDEHSTLNSKFRNHQIT 71

Query: 107 SPAAK--AAVMLQQQLLL--SRGISSVADHGLPPMPLSLSNADLDRSHNDIV-------D 166
           SP  K  AA+MLQQ LL   +  +    +    P P   ++A +   +N           
Sbjct: 72  SPTTKAAAALMLQQHLLQMPANDVVDPTNFFKSPNPGGEASASVQALYNGFTGSLNGTQP 131

Query: 167 RSCFRPPNSGGG--IQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSI 226
           +  F+ P  G    IQ  +FGA  N    A     GG +  Q K +VRARRGQATDPHSI
Sbjct: 132 QQHFQHPPQGNSNQIQGQNFGAT-NQAPPASGSAGGGGNQGQAKPRVRARRGQATDPHSI 191

Query: 227 AERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAV 286
           AERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAV
Sbjct: 192 AERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAV 251

Query: 287 APLGADVSAEASSLKGGGECMQGGRSSNGSGG-------NQTASSNDSVTVTEQQVARLM 346
           APL AD+S+E     GGG+C+     +NG+GG          +++NDS+T+TE QVA+LM
Sbjct: 252 APLVADISSEGGGGGGGGDCV-----TNGAGGVLPRSTTTAASTTNDSLTMTEHQVAKLM 311

Query: 347 EKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPII-NGSGGHHPMMGSNGEGPSSP 399
           E+DMGSAMQYLQGKGLCLMPISLATAIST+TC +R+P+I N          SNGEGPSSP
Sbjct: 312 EEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRSPLIPNNLANLAAAAASNGEGPSSP 371

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BLAST of CmoCh11G004700 vs. ExPASy Swiss-Prot
Match: Q9ZUG9 (Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-62
Identity = 157/249 (63.05%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 153 PPNSGGGIQSHSFGAQGNMMNQAPDGGSGG---ISPSQPKQKVRARRGQATDPHSIAERL 212
           P  SGGG+ +     Q     QA    + G    +P Q + K+RARRGQATDPHSIAERL
Sbjct: 96  PQGSGGGLMNQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERL 155

Query: 213 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLG 272
           RRERIAERMKALQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA+     
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS----- 215

Query: 273 ADVSAEASSLKGGGECMQGGRSSNGSGGNQTA-SSNDSVTVTEQQVARLMEKDMGSAMQY 332
             VS++ S   G      G  SS   GG+QTA +SNDSVT+TE QVA+LME+DMGSAMQY
Sbjct: 216 --VSSQISEAGGS----HGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQY 275

Query: 333 LQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSVLTVQSTS 392
           LQGKGLCLMPISLATAIST+TC SRNP+I G+        ++  GPS P++S +T+QSTS
Sbjct: 276 LQGKGLCLMPISLATAISTATCHSRNPLIPGA-------VADVGGPSPPNLSGMTIQSTS 326

Query: 393 --MGNGSVK 396
             MG+G+ K
Sbjct: 336 TKMGSGNGK 326

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BLAST of CmoCh11G004700 vs. ExPASy Swiss-Prot
Match: Q8S3D5 (Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2)

HSP 1 Score: 211.1 bits (536), Expect = 2.4e-53
Identity = 170/375 (45.33%), Postives = 200/375 (53.33%), Query Frame = 0


Query: 32  LNPPSEQIPGSQLHHFDPVAAASHDDFLEQMLHTIPSCSWPDLNPSNPKSPWDINPINKP 91
           L P S   P     H    A   HDDFL    H   S  W       P S  D  P   P
Sbjct: 7   LTPSSSPSP-----HLQSPATFDHDDFLH---HIFSSTPW-------PSSVLDDTP--PP 66

Query: 92  SRDISDTSPAAKAAVMLQQQLLLSRGISSVADHGLPPMPLSLSNADLDRSHNDIVDRSC- 151
           + D +  +         + Q+ +              +PLS  N   D   N     S  
Sbjct: 67  TSDCAPVTGFHHHDADSRNQITM--------------IPLS-HNHPNDALFNGFSTGSLP 126

Query: 152 FRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQP--KQKVRARRGQATDPHSIAER 211
           F  P   GG        Q    +QA    + G + +QP  K KVRARRGQATDPHSIAER
Sbjct: 127 FHLPQGSGG--------QTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAER 186

Query: 212 LRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPL 271
           LRRERIAERMK+LQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA+ +  
Sbjct: 187 LRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASAS-- 246

Query: 272 GADVSAEASSLKGGGECMQGGRSSNGSGGNQTASSNDSVTVTEQQVARLMEKDMGSAMQY 331
            + +S +A                   G ++  SS+    +TE QVA+LME+DMGSAMQY
Sbjct: 247 -SQISEDA------------------GGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQY 306

Query: 332 LQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSVLTVQSTS 391
           LQGKGLCLMPISLAT IST+TCPSR+P +  +G            P SP++S   V +  
Sbjct: 307 LQGKGLCLMPISLATTISTATCPSRSPFVKDTG-----------VPLSPNLSTTIVAN-- 306

Query: 392 MGNGS----VKDAAS 400
            GNGS    VKDA S
Sbjct: 367 -GNGSSLVTVKDAPS 306

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BLAST of CmoCh11G004700 vs. ExPASy Swiss-Prot
Match: Q9LSQ3 (Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-52
Identity = 140/235 (59.57%), Postives = 156/235 (66.38%), Query Frame = 0


Query: 127 PPMPLSLSNA-DLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISP 186
           PP P SL +A  +D    D        P  SGG       G Q       P G     S 
Sbjct: 42  PPPPQSLFHALAVDAPFPD----QFHHPQESGGPTMGSQEGLQ-------PQGTVSTTSA 101

Query: 187 SQPKQK--VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 246
              +QK  VRARRGQATDPHSIAERLRRERIAERMK+LQELVPN NKTDKASMLDEII+Y
Sbjct: 102 PVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 161

Query: 247 VKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQTASS 306
           V+FLQLQVKVLSMSRLGGA +V P    +SAEA            G + N   GN T SS
Sbjct: 162 VRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNGLNGN---GNATGSS 221

Query: 307 NDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIIN 359
           N+S+  TEQ+VA+LME+DMGSAMQYLQGKGLCLMPISLATAIS+ST  SR  + N
Sbjct: 222 NESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFN 262

[Close]

BLAST of CmoCh11G004700 vs. ExPASy Swiss-Prot
Match: O22768 (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 4.2e-42
Identity = 116/218 (53.21%), Postives = 141/218 (64.68%), Query Frame = 0


Query: 140 RSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQA 199
           R  +D+VD  C           S      G  M Q P   S    P+  + +VRARRGQA
Sbjct: 106 RFSDDVVDNRC----------SSMKPVFHGQPMQQPPP--SAPHQPTSIRPRVRARRGQA 165

Query: 200 TDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 259
           TDPHSIAERLRRERIAER++ALQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRL
Sbjct: 166 TDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRL 225

Query: 260 GGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQTASSNDSVTVTEQQVARLME 319
           GGA AVAPL  D+   +S     GE   GGR+       Q A    S   TE+QVA+LME
Sbjct: 226 GGAGAVAPLVTDMPLSSSVEDETGE---GGRTP------QPAWEKWSNDGTERQVAKLME 285

Query: 320 KDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPII 358
           +++G+AMQ LQ K LC+MPISLA AI  S  P  + ++
Sbjct: 286 ENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVV 302

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BLAST of CmoCh11G004700 vs. ExPASy TrEMBL
Match: A0A6J1F0N6 (transcription factor bHLH66-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441063 PE=4 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 2.8e-219
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300

Query: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
           ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 400

[Close]

BLAST of CmoCh11G004700 vs. ExPASy TrEMBL
Match: A0A6J1F5P1 (transcription factor bHLH66-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441063 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.2e-215
Identity = 395/400 (98.75%), Postives = 395/400 (98.75%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAE     GGGECMQGGRSSNGSGGNQT
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAE-----GGGECMQGGRSSNGSGGNQT 300

Query: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
           ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 395

[Close]

BLAST of CmoCh11G004700 vs. ExPASy TrEMBL
Match: A0A6J1HQC8 (transcription factor bHLH66-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465715 PE=4 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.5e-212
Identity = 391/400 (97.75%), Postives = 395/400 (98.75%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM++LNSLLNNSQISLQDLHGD+HHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMQSLNSLLNNSQISLQDLHGDEHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKA VMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAVVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS E SSLKGGGECMQGGRSSNGSGGNQT
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSDEVSSLKGGGECMQGGRSSNGSGGNQT 300

Query: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
           ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GG HP+MGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GG-HPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 399

[Close]

BLAST of CmoCh11G004700 vs. ExPASy TrEMBL
Match: A0A6J1HQM0 (transcription factor bHLH66-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465715 PE=4 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 7.8e-209
Identity = 387/400 (96.75%), Postives = 391/400 (97.75%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM++LNSLLNNSQISLQDLHGD+HHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMQSLNSLLNNSQISLQDLHGDEHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKA VMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAVVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS E     GGGECMQGGRSSNGSGGNQT
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSDE-----GGGECMQGGRSSNGSGGNQT 300

Query: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
           ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GG HP+MGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GG-HPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 394

[Close]

BLAST of CmoCh11G004700 vs. ExPASy TrEMBL
Match: A0A6J1E2F8 (transcription factor bHLH82-like OS=Cucurbita moschata OX=3662 GN=LOC111429967 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 3.4e-180
Identity = 352/422 (83.41%), Postives = 371/422 (87.91%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGD-DHHLNPPSEQIPGSQLHHFDPVAAASHDDFL 60
           MQPCSREM+T NSLLN+SQISLQDLH D  HHLNPP  QIP SQLHHFDP AAASHDDFL
Sbjct: 1   MQPCSREMQTFNSLLNHSQISLQDLHADAPHHLNPPPPQIPASQLHHFDPAAAASHDDFL 60

Query: 61  EQMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISD---------TSPAAKAAVMLQQ 120
           EQML+TIPSCSWPDLNPSNPKSPWD+NPINKPSRDISD         TSPAAKAAVMLQQ
Sbjct: 61  EQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDHHQSHITATSPAAKAAVMLQQ 120

Query: 121 QLLLSRGIS-----SVADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSF 180
           QLLL+RGIS      VADHGLPPMPLSL NADLDRS ND+V+ SCFR PNSGG IQSHSF
Sbjct: 121 QLLLNRGISVSAGNGVADHGLPPMPLSLGNADLDRSQNDVVEGSCFRTPNSGGSIQSHSF 180

Query: 181 GAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELV 240
           GA GN M+Q P GGS G+SPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELV
Sbjct: 181 GAPGNGMSQTPAGGSVGVSPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELV 240

Query: 241 PNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGEC 300
           PNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS+E     GGGEC
Sbjct: 241 PNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSE-----GGGEC 300

Query: 301 MQ------GGRSSN--GSGGNQTASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLM 360
           MQ      GGR+SN  G GGNQTASSNDS+TVTEQQVA+LMEKDMGSAMQYLQGKGLCLM
Sbjct: 301 MQGSGAQGGGRNSNNGGGGGNQTASSNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLM 360

Query: 361 PISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDA 400
           PISLATAISTSTC +RNP++NG GG HP+MG+NGEGP+SPSMSVLTVQSTSMGNGSVKDA
Sbjct: 361 PISLATAISTSTCHTRNPMMNG-GGQHPVMGTNGEGPTSPSMSVLTVQSTSMGNGSVKDA 416

[Close]

BLAST of CmoCh11G004700 vs. NCBI nr
Match: XP_022933737.1 (transcription factor bHLH66-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 770.8 bits (1989), Expect = 5.9e-219
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300

Query: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
           ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 400

[Close]

BLAST of CmoCh11G004700 vs. NCBI nr
Match: XP_022933738.1 (transcription factor bHLH66-like isoform X2 [Cucurbita moschata] >KAG7035671.1 Transcription factor bHLH66 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 756.9 bits (1953), Expect = 8.8e-215
Identity = 395/400 (98.75%), Postives = 395/400 (98.75%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAE     GGGECMQGGRSSNGSGGNQT
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAE-----GGGECMQGGRSSNGSGGNQT 300

Query: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
           ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 395

[Close]

BLAST of CmoCh11G004700 vs. NCBI nr
Match: XP_022966000.1 (transcription factor bHLH66-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 748.4 bits (1931), Expect = 3.1e-212
Identity = 391/400 (97.75%), Postives = 395/400 (98.75%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM++LNSLLNNSQISLQDLHGD+HHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMQSLNSLLNNSQISLQDLHGDEHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKA VMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAVVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS E SSLKGGGECMQGGRSSNGSGGNQT
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSDEVSSLKGGGECMQGGRSSNGSGGNQT 300

Query: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
           ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GG HP+MGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GG-HPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 399

[Close]

BLAST of CmoCh11G004700 vs. NCBI nr
Match: XP_022966008.1 (transcription factor bHLH66-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 736.1 bits (1899), Expect = 1.6e-208
Identity = 387/400 (96.75%), Postives = 391/400 (97.75%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM++LNSLLNNSQISLQDLHGD+HHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMQSLNSLLNNSQISLQDLHGDEHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKA VMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAVVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS E     GGGECMQGGRSSNGSGGNQT
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSDE-----GGGECMQGGRSSNGSGGNQT 300

Query: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
           ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GG HP+MGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GG-HPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 394

[Close]

BLAST of CmoCh11G004700 vs. NCBI nr
Match: KAG6587835.1 (Transcription factor basic helix-loop-helix 66, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 731.9 bits (1888), Expect = 3.0e-207
Identity = 385/393 (97.96%), Postives = 387/393 (98.47%), Query Frame = 0


Query: 8   METLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLEQMLHTIP 67
           M+TLNSL+NNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLEQMLHTIP
Sbjct: 1   MQTLNSLINNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLEQMLHTIP 60

Query: 68  SCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISSVADHGLP 127
           SCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISSVADHGLP
Sbjct: 61  SCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISSVADHGLP 120

Query: 128 PMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQ 187
           PMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQ
Sbjct: 121 PMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQ 180

Query: 188 PKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 247
           PKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL
Sbjct: 181 PKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 240

Query: 248 QLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQTASSNDSV 307
           QLQVKVLSMSRLGGAAAVAPLGADVSAE     GGGECMQGGRSSNGSGGNQTASSNDSV
Sbjct: 241 QLQVKVLSMSRLGGAAAVAPLGADVSAE-----GGGECMQGGRSSNGSGGNQTASSNDSV 300

Query: 308 TVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMM 367
           TVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGG HPMM
Sbjct: 301 TVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGG-HPMM 360

Query: 368 GSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 401
           GSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 387

[Close]

BLAST of CmoCh11G004700 vs. TAIR 10
Match: AT2G24260.1 (LJRHL1-like 1 )

HSP 1 Score: 241.9 bits (616), Expect = 8.8e-64
Identity = 157/249 (63.05%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 153 PPNSGGGIQSHSFGAQGNMMNQAPDGGSGG---ISPSQPKQKVRARRGQATDPHSIAERL 212
           P  SGGG+ +     Q     QA    + G    +P Q + K+RARRGQATDPHSIAERL
Sbjct: 96  PQGSGGGLMNQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERL 155

Query: 213 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLG 272
           RRERIAERMKALQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA+     
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS----- 215

Query: 273 ADVSAEASSLKGGGECMQGGRSSNGSGGNQTA-SSNDSVTVTEQQVARLMEKDMGSAMQY 332
             VS++ S   G      G  SS   GG+QTA +SNDSVT+TE QVA+LME+DMGSAMQY
Sbjct: 216 --VSSQISEAGGS----HGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQY 275

Query: 333 LQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSVLTVQSTS 392
           LQGKGLCLMPISLATAIST+TC SRNP+I G+        ++  GPS P++S +T+QSTS
Sbjct: 276 LQGKGLCLMPISLATAISTATCHSRNPLIPGA-------VADVGGPSPPNLSGMTIQSTS 326

Query: 393 --MGNGSVK 396
             MG+G+ K
Sbjct: 336 TKMGSGNGK 326

[Close]

BLAST of CmoCh11G004700 vs. TAIR 10
Match: AT4G30980.1 (LJRHL1-like 2 )

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-54
Identity = 170/375 (45.33%), Postives = 200/375 (53.33%), Query Frame = 0


Query: 32  LNPPSEQIPGSQLHHFDPVAAASHDDFLEQMLHTIPSCSWPDLNPSNPKSPWDINPINKP 91
           L P S   P     H    A   HDDFL    H   S  W       P S  D  P   P
Sbjct: 7   LTPSSSPSP-----HLQSPATFDHDDFLH---HIFSSTPW-------PSSVLDDTP--PP 66

Query: 92  SRDISDTSPAAKAAVMLQQQLLLSRGISSVADHGLPPMPLSLSNADLDRSHNDIVDRSC- 151
           + D +  +         + Q+ +              +PLS  N   D   N     S  
Sbjct: 67  TSDCAPVTGFHHHDADSRNQITM--------------IPLS-HNHPNDALFNGFSTGSLP 126

Query: 152 FRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQP--KQKVRARRGQATDPHSIAER 211
           F  P   GG        Q    +QA    + G + +QP  K KVRARRGQATDPHSIAER
Sbjct: 127 FHLPQGSGG--------QTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAER 186

Query: 212 LRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPL 271
           LRRERIAERMK+LQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA+ +  
Sbjct: 187 LRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASAS-- 246

Query: 272 GADVSAEASSLKGGGECMQGGRSSNGSGGNQTASSNDSVTVTEQQVARLMEKDMGSAMQY 331
            + +S +A                   G ++  SS+    +TE QVA+LME+DMGSAMQY
Sbjct: 247 -SQISEDA------------------GGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQY 306

Query: 332 LQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSVLTVQSTS 391
           LQGKGLCLMPISLAT IST+TCPSR+P +  +G            P SP++S   V +  
Sbjct: 307 LQGKGLCLMPISLATTISTATCPSRSPFVKDTG-----------VPLSPNLSTTIVAN-- 306

Query: 392 MGNGS----VKDAAS 400
            GNGS    VKDA S
Sbjct: 367 -GNGSSLVTVKDAPS 306

[Close]

BLAST of CmoCh11G004700 vs. TAIR 10
Match: AT5G58010.1 (LJRHL1-like 3 )

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-53
Identity = 140/235 (59.57%), Postives = 156/235 (66.38%), Query Frame = 0


Query: 127 PPMPLSLSNA-DLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISP 186
           PP P SL +A  +D    D        P  SGG       G Q       P G     S 
Sbjct: 42  PPPPQSLFHALAVDAPFPD----QFHHPQESGGPTMGSQEGLQ-------PQGTVSTTSA 101

Query: 187 SQPKQK--VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 246
              +QK  VRARRGQATDPHSIAERLRRERIAERMK+LQELVPN NKTDKASMLDEII+Y
Sbjct: 102 PVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 161

Query: 247 VKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQTASS 306
           V+FLQLQVKVLSMSRLGGA +V P    +SAEA            G + N   GN T SS
Sbjct: 162 VRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNGLNGN---GNATGSS 221

Query: 307 NDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIIN 359
           N+S+  TEQ+VA+LME+DMGSAMQYLQGKGLCLMPISLATAIS+ST  SR  + N
Sbjct: 222 NESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFN 262

[Close]

BLAST of CmoCh11G004700 vs. TAIR 10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-43
Identity = 116/218 (53.21%), Postives = 141/218 (64.68%), Query Frame = 0


Query: 140 RSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQA 199
           R  +D+VD  C           S      G  M Q P   S    P+  + +VRARRGQA
Sbjct: 106 RFSDDVVDNRC----------SSMKPVFHGQPMQQPPP--SAPHQPTSIRPRVRARRGQA 165

Query: 200 TDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 259
           TDPHSIAERLRRERIAER++ALQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRL
Sbjct: 166 TDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRL 225

Query: 260 GGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQTASSNDSVTVTEQQVARLME 319
           GGA AVAPL  D+   +S     GE   GGR+       Q A    S   TE+QVA+LME
Sbjct: 226 GGAGAVAPLVTDMPLSSSVEDETGE---GGRTP------QPAWEKWSNDGTERQVAKLME 285

Query: 320 KDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPII 358
           +++G+AMQ LQ K LC+MPISLA AI  S  P  + ++
Sbjct: 286 ENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVV 302

[Close]

BLAST of CmoCh11G004700 vs. TAIR 10
Match: AT4G02590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-43
Identity = 116/218 (53.21%), Postives = 141/218 (64.68%), Query Frame = 0


Query: 140 RSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQA 199
           R  +D+VD  C           S      G  M Q P   S    P+  + +VRARRGQA
Sbjct: 106 RFSDDVVDNRC----------SSMKPVFHGQPMQQPPP--SAPHQPTSIRPRVRARRGQA 165

Query: 200 TDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 259
           TDPHSIAERLRRERIAER++ALQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRL
Sbjct: 166 TDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRL 225

Query: 260 GGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQTASSNDSVTVTEQQVARLME 319
           GGA AVAPL  D+   +S     GE   GGR+       Q A    S   TE+QVA+LME
Sbjct: 226 GGAGAVAPLVTDMPLSSSVEDETGE---GGRTP------QPAWEKWSNDGTERQVAKLME 285

Query: 320 KDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPII 358
           +++G+AMQ LQ K LC+MPISLA AI  S  P  + ++
Sbjct: 286 ENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVV 302

The following BLAST results are available for this feature:

BLAST of CmoCh11G004700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D0PX88	2.7e-81	54.45	bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1	[more]
Q9ZUG9	1.2e-62	63.05	Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1	[more]
Q8S3D5	2.4e-53	45.33	Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2	[more]
Q9LSQ3	1.5e-52	59.57	Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1	[more]
O22768	4.2e-42	53.21	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2	[more]

BLAST of CmoCh11G004700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0N6	2.8e-219	100.00	transcription factor bHLH66-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1F5P1	4.2e-215	98.75	transcription factor bHLH66-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HQC8	1.5e-212	97.75	transcription factor bHLH66-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1HQM0	7.8e-209	96.75	transcription factor bHLH66-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1E2F8	3.4e-180	83.41	transcription factor bHLH82-like OS=Cucurbita moschata OX=3662 GN=LOC111429967 P...	[more]

BLAST of CmoCh11G004700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933737.1	5.9e-219	100.00	transcription factor bHLH66-like isoform X1 [Cucurbita moschata]	[more]
XP_022933738.1	8.8e-215	98.75	transcription factor bHLH66-like isoform X2 [Cucurbita moschata] >KAG7035671.1 T...	[more]
XP_022966000.1	3.1e-212	97.75	transcription factor bHLH66-like isoform X1 [Cucurbita maxima]	[more]
XP_022966008.1	1.6e-208	96.75	transcription factor bHLH66-like isoform X2 [Cucurbita maxima]	[more]
KAG6587835.1	3.0e-207	97.96	Transcription factor basic helix-loop-helix 66, partial [Cucurbita argyrosperma ...	[more]

BLAST of CmoCh11G004700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24260.1	8.8e-64	63.05	LJRHL1-like 1	[more]
AT4G30980.1	1.7e-54	45.33	LJRHL1-like 2	[more]
AT5G58010.1	1.1e-53	59.57	LJRHL1-like 3	[more]
AT4G02590.1	3.0e-43	53.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.2	3.0e-43	53.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 204..253 e-value: 1.5E-13 score: 61.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 203..248 e-value: 1.5E-9 score: 37.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 198..247 score: 17.389959
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 193..255 e-value: 1.4E-15 score: 58.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 196..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 355..400
None	No IPR available	PANTHER	PTHR16223:SF120	TRANSCRIPTION FACTOR BHLH69	coord: 46..358
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 46..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G004700.1	CmoCh11G004700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding