CmoCh11G003570 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G003570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nucleolar and coiled-body phosphoprotein 1 isoform X1
Location	Cmo_Chr11: 1749345 .. 1752852 (-)
RNA-Seq Expression	CmoCh11G003570
Synteny	CmoCh11G003570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCCTAGCGGGGAAGCAGCAGTCTTCTTCAATGCGACGAGCGTATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGTTTCGTTCCGAAGCGCAGATTGAGGTCAGTACTTCGAACTCTGGTTCTTCGCGGTTTCATAAGTCAAACTTTTTGGTTGCGGTGGTTAATATTAGTTTTATTCATTTGCTGCTCATTATGGCGTTCAATCGATTGTCTTTACAGAATGCGCTATTCATGGACCTTCTCGTCCAAAACGCTTGTTTTGTTAAAGTTTAATCCTATTTTCATGTTTTTATCGAACAAGGTTATCTATGTTGAAACAATTCCCTTTTCTGTTGCTATTCGTGCAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGGTAGGATTAGAGATTATCTTGATTCTTGTCTAAACTCAAAAGAAAAGTGACAATTTCTTATGTATTGATTTCTTTTGCCCGAATCTTATTTGATCTAGATATGAATTCATTCATCTAACTTAAAAGTTATAATATGCAGTACTCAAGCCATTGCTACACCAAACAAACCAGGTATTCTCATATTGTCCACGATCTTTTAATTTATTTGTTCTTATAGTTTAGGAAACTTAGCTACAATTATTTTTAAAAATTTGTAATACGACATGAAATGATTGATTTTAATTGTGCATCTCTTCTTGGCTGGATTTGATCTAGTAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGCAGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGCTGTTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGAACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGATCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGACGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGGTATGTGTATATTGGCATCACATAGAGGTCGAATTTCTTTATCTGCAATAATCTTTTGATGATTTAACTATATTTTGGCATTGTAATATGTAGAAGACTCAAGTGTTCTGTCTTTAATCCTTTCGATATTTAACTAGACATAGGGCCTCCAAAGATGTGAAAAACATAATAACTTAACTCCATGAGCATGCCAAATATCTTTGTGAGATCCTATATCGGTTGGAGAGGGGAACAAAGCATTCTTTATAAGAGTATGGAAACCTCTCCCTAATAGACGCATTTTTAAACCTCGAAGGGAAAGCTTAAAGAGGACAAAATCTGCTAGTGGTTGGCTTGAACTGTTACAAATGGTATCAGAATCAGATACCGGGCGCTGTGCTAGCAAGGACGTTGGGCCCCCAAGGGGGGTGGATTTTGAGATCCCACATCAATTGGAGAGGGAAACGAAACATTCCTTATAAGGGCGTGGGAATCTCTCCCTAACAGACATGTTTTAAAACCTCGAGGGGTAGCCTTTGAAGGGAAAGCTTAAAGAGGACAATATCTGCTAGCGGTGGACTTAAGCTATTAGAATCCCACATATAGCCGCTCTTCTGCTTCTAAATGTCTTCTCTCCTTGAGTGGCGCCTATTTTTTATATGTATATGGCAAGCATTTTGTGATTCTAGTAGCAATTTGAAAAAAGAAGCAAGTTGACTTGGTAATGGAATATCAATTTTTAATATTCATGTATGATATGAAGAAGATTTAGTTAATACCCATCGAATTCCACAAATTGTATTTGTTGCTAAAGATCAGTGAACATGAGGTAGTGGGATCTTTTAAATTTTAATCCTTATCACTTTCACTTGATACAAGATCAACTGTGCTGAAAGATTGTATAATTGCAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGTGGGATTTGCTATATTATTGGCTTCTTGCCGCAATGCAGCTTGCTTTCAGTAGGATCTTTTGTTTCTCATTTCTAATCTATCATATTGGGCAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGTTCTCGGGCAGGTTAAAGGAAGGTATTTTTCCCTGACCCTTTTCTCTCTTAGCTTTTACTTAGTTCTAGCTTATAGTTTGTCTATGGTGTTTAGTAACTGCTGCTGATGTGCTAAAAGTTTGGATGTTAAATATTTTAACTGAGAATGGTCGATGAGAAAATGAGAGAAGGGAGGGGGGGTGTGGATGGTAATGTCATCTATGTGAATGAAAGAAACACGTGTGTCTTAGTGTGAGATCCCACATTGGTTGGGAAGAAGAATGGAACATTCTCTATAAGGGTATGGAAACCTATCCCTAGTAGATGCGTTTTAAAAACCTTGAGTGGAAAACTCAAGGAGGACAATATTTACTAGTGGTGAGTCGGGCCGTTACACTTGACGTTTGTTATTGGGTTAAAACATTTTGTTGACTAAAATTTCCTCAATACTTCTTGGTTCAAATTTATGTATTTCTCAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCCGATGAGGATTGATCATCATATTAATGGATTCAGATTATGGTTCTTCACCTCTTTTTATCAATCATGAAGGAGGGAAGTTTCCATTTAATGAAAAAAATAGTTGTATGTTGCATAGAAATTGGAAAGGATTGATTGATGTTCTATAGAACATTATTTTTTGGAAGGAATCCACTCAAAAGTTGGGCTACTGCCTTCACCGATCCTGAACTTAATATTCTATTGTGTAGGTCTCCAAATGCTCTGTAGTTTACATAATATATTTTTTCATAATATATTCATTACATAATATAACTTATTATTGTTCTA

mRNA sequence

AAACCCTAGCGGGGAAGCAGCAGTCTTCTTCAATGCGACGAGCGTATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGTTTCGTTCCGAAGCGCAGATTGAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCTACACCAAACAAACCAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGCAGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGCTGTTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGAACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGATCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGACGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGTTCTCGGGCAGGTTAAAGGAAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCCGATGAGGATTGATCATCATATTAATGGATTCAGATTATGGTTCTTCACCTCTTTTTATCAATCATGAAGGAGGGAAGTTTCCATTTAATGAAAAAAATAGTTGTATGTTGCATAGAAATTGGAAAGGATTGATTGATGTTCTATAGAACATTATTTTTTGGAAGGAATCCACTCAAAAGTTGGGCTACTGCCTTCACCGATCCTGAACTTAATATTCTATTGTGTAGGTCTCCAAATGCTCTGTAGTTTACATAATATATTTTTTCATAATATATTCATTACATAATATAACTTATTATTGTTCTA

Coding sequence (CDS)

ATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGTTTCGTTCCGAAGCGCAGATTGAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCTACACCAAACAAACCAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGCAGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGCTGTTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGAACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGATCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGACGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGTTCTCGGGCAGGTTAAAGGAAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCCGATGAGGATTGA

Protein sequence

MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED

Homology

[Close]

BLAST of CmoCh11G003570 vs. ExPASy Swiss-Prot
Match: Q14978 (Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-08
Identity = 80/290 (27.59%), Postives = 128/290 (44.14%), Query Frame = 0


Query: 125 RAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAV 184
           +A  +  E    S +++K KK VA T              ++A + S+D     +  ++ 
Sbjct: 420 KADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSE 479

Query: 185 TLEENVVKS---KKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKK 244
             EE   KS   KK +K  G     + ++    +      + S       EE+   K   
Sbjct: 480 EEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSP 539

Query: 245 RKRLASEDLDSCTVDQN-------ETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTN 304
           R +    +  S    QN       E E+ +++K            +  V+ S  L ++  
Sbjct: 540 RPQAPKANGTSALTAQNGKAAKNSEEEEEEKKK-----------AAVVVSKSGSLKKRKQ 599

Query: 305 EYVEKTAEKTSSKKALKKHSN-----GSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK 364
               K AE   +KK   +  N        E +  + F+RV+ + +   D ++ADNS+ AK
Sbjct: 600 NEAAKEAETPQAKKIKLQTPNTFPKRKKGEKRASSPFRRVREEEIEV-DSRVADNSFDAK 659

Query: 365 GGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN 400
            GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +S+KF+
Sbjct: 660 RGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 697

[Close]

BLAST of CmoCh11G003570 vs. ExPASy Swiss-Prot
Match: P41777 (Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc1 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-08
Identity = 82/304 (26.97%), Postives = 135/304 (44.41%), Query Frame = 0


Query: 105 QAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQ 164
           +A+ATP +P     K     +A  +  E    S +++  KK+V      +          
Sbjct: 410 KAVATPKQPAGSGQKPQ-SRKADSSSSEEESSSSEEEATKKSVTTPKARVTAKAAPSLPA 469

Query: 165 EEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNES 224
           ++A +   D     + E++ + EE     K   KK     +      +    +E + + S
Sbjct: 470 KQAPRAGGD--SSSDSESSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKKAAAESSSSSS 529

Query: 225 IGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQN---------ETEDIKRRKLEGSKGCN 284
               +  EE+   KSK   +  +   +     QN         E ED ++ K        
Sbjct: 530 SSEDSSEEEKKKPKSKATPKPQAGKANGVPASQNGKAGKESEEEEEDTEQNKKAAGTKPG 589

Query: 285 DGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVT 344
            G +     T++E +   ++ V+     T  K+  KK    ++ P     F+RV+ + + 
Sbjct: 590 SGKKRKHNETADEAATPQSKKVKLQTPNTFPKR--KKGEKRASSP-----FRRVREEEIE 649

Query: 345 FSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHS 400
             D ++ADNS+ AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +S
Sbjct: 650 V-DSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNS 702

[Close]

BLAST of CmoCh11G003570 vs. ExPASy Swiss-Prot
Match: E9Q5C9 (Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.0e-08
Identity = 92/311 (29.58%), Postives = 142/311 (45.66%), Query Frame = 0


Query: 105 QAIATPNKPDEETVK---------EGFDDRAPEAQEEPTKKS----KDKKKIKKAVAETH 164
           +A+ TP +P     K            ++ +   +EE +KKS    K K   K A A+  
Sbjct: 407 KAVTTPKQPAGSNQKPQSRKADSSSSEEESSSSEEEEASKKSATTPKAKVTAKAAPAKQA 466

Query: 165 VDIAENEKSD---SVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKDGRLLSDEN 224
              A +  SD   S  EE  K  K   KKK    AV+      K++ K        S E+
Sbjct: 467 PQAAGDSSSDSDSSSSEEEEKTPKPPAKKKAAGGAVSTPAPGKKAEAKSSSSSSSSSSED 526

Query: 225 SNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKL 284
           S++   +         I     +    +   K  K    E+      ++ ETE+  ++K 
Sbjct: 527 SSEEEKKKKPKATTPKIQASKANGTPASLNGKAAKESEEEE------EEEETEE--KKKA 586

Query: 285 EGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQR 344
            G+K    G +  +  T++E +    + V+     T  K+  KK    ++ P     F+R
Sbjct: 587 AGTKP-GSGKKRKQNETADEATTPQAKKVKLETPNTFPKR--KKGERRASSP-----FRR 646

Query: 345 VKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGV 400
           V+ + +   D ++ADNS+ AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG 
Sbjct: 647 VREEEIEV-DSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGS 700

[Close]

BLAST of CmoCh11G003570 vs. ExPASy TrEMBL
Match: A0A6J1ETE6 (nucleolar and coiled-body phosphoprotein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437563 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.2e-213
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120

Query: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180
           GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK
Sbjct: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180

Query: 181 ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK 240
           ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK
Sbjct: 181 ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK 240

Query: 241 KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300
           KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
Sbjct: 241 KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300

Query: 301 AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360
           AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA
Sbjct: 301 AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360

Query: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405
           QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED
Sbjct: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 404

[Close]

BLAST of CmoCh11G003570 vs. ExPASy TrEMBL
Match: A0A6J1EYA7 (nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437563 PE=4 SV=1)

HSP 1 Score: 745.3 bits (1923), Expect = 1.3e-211
Identity = 404/405 (99.75%), Postives = 404/405 (99.75%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP-DEETVK 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP DEETVK
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS
Sbjct: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK 360
           TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK 360

Query: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405
           AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED
Sbjct: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405

[Close]

BLAST of CmoCh11G003570 vs. ExPASy TrEMBL
Match: A0A6J1IB66 (nucleolar and coiled-body phosphoprotein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473013 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.7e-195
Identity = 380/404 (94.06%), Postives = 384/404 (95.05%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLS HTTKKANDIEAPMSAIKAVSLDPEQRT+LLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSHHTTKKANDIEAPMSAIKAVSLDPEQRTILLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120
           FL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIAT NK DEETVKE
Sbjct: 61  FLQRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATQNKRDEETVKE 120

Query: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180
           G  DRAP AQEEPTKKSKDKKKIKKAV ET VDIAENEKSDSVQEEARKKSKDKKKKKNK
Sbjct: 121 GLGDRAPGAQEEPTKKSKDKKKIKKAVPETLVDIAENEKSDSVQEEARKKSKDKKKKKNK 180

Query: 181 ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK 240
           EN  TLEENVVKSKKKKKKD RLLSDENSNQLMTRCSE T NE+ G KTPHEEEHNDKSK
Sbjct: 181 ENVATLEENVVKSKKKKKKDVRLLSDENSNQLMTRCSEETSNENDGTKTPHEEEHNDKSK 240

Query: 241 KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300
           KRKRLASEDLDS TVDQNETEDIKRRKLE SKGCNDGVQSTKVNTSNELSQQTNEYVEKT
Sbjct: 241 KRKRLASEDLDSHTVDQNETEDIKRRKLESSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300

Query: 301 AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360
           +EKTSSKKALKKHSN SAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA
Sbjct: 301 SEKTSSKKALKKHSNCSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360

Query: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405
           QE LGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSD+D
Sbjct: 361 QEALGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 404

[Close]

BLAST of CmoCh11G003570 vs. ExPASy TrEMBL
Match: A0A6J1IDS9 (nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473013 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 4.2e-194
Identity = 380/405 (93.83%), Postives = 384/405 (94.81%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLS HTTKKANDIEAPMSAIKAVSLDPEQRT+LLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSHHTTKKANDIEAPMSAIKAVSLDPEQRTILLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNK-PDEETVK 120
           FL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIAT NK  DEETVK
Sbjct: 61  FLQRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATQNKRVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EG  DRAP AQEEPTKKSKDKKKIKKAV ET VDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGLGDRAPGAQEEPTKKSKDKKKIKKAVPETLVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KEN  TLEENVVKSKKKKKKD RLLSDENSNQLMTRCSE T NE+ G KTPHEEEHNDKS
Sbjct: 181 KENVATLEENVVKSKKKKKKDVRLLSDENSNQLMTRCSEETSNENDGTKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDS TVDQNETEDIKRRKLE SKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSHTVDQNETEDIKRRKLESSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK 360
           T+EKTSSKKALKKHSN SAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK
Sbjct: 301 TSEKTSSKKALKKHSNCSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK 360

Query: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405
           AQE LGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSD+D
Sbjct: 361 AQEALGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 405

[Close]

BLAST of CmoCh11G003570 vs. ExPASy TrEMBL
Match: A0A6J1C0U0 (nucleolar and coiled-body phosphoprotein 1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007414 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 2.3e-144
Identity = 315/463 (68.03%), Postives = 345/463 (74.51%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           M++TLTTSVSPSLLA KPRQVLLS+    +    E P S  + VSL+PEQRTLLLHAV+ 
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSD-QGVSLEPEQRTLLLHAVAF 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120
           +L RNGFSK+LKKFRSEAQIEKD SKD  +SLEEMCH +LKKC+QAI T NK  +ETVKE
Sbjct: 61  YLERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNK--QETVKE 120

Query: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDS------------------ 180
             DD  PEAQEEP KKSK+KK  K  V ETH D  E EKS+S                  
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 -VQEEARKKSKDKKKKKNKE---------------------------NAVTLEENVVKSK 240
            V EEA KKSKDKKKKKNKE                           NA+TLEE V KSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 KKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCT 300
            KKKKDG+ L DENSNQLMT   EGT+N++ GIKT HE+E+ND SKKRKRLASED DS T
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDQNETEDIKRRKLEGSKGCNDGVQSTKVN-------------TSNELSQQTNEYVEKTA 360
           VD+  TED+KRRKLEGSKGCN+GVQSTKVN             TSNELSQQT E VEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 EKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQ 405
           E+TS+KKA+KKHSNGS EPKTINAFQRVKVDAVTF+DEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

[Close]

BLAST of CmoCh11G003570 vs. NCBI nr
Match: XP_022931357.1 (nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 750.0 bits (1935), Expect = 1.1e-212
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120

Query: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180
           GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK
Sbjct: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180

Query: 181 ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK 240
           ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK
Sbjct: 181 ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK 240

Query: 241 KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300
           KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
Sbjct: 241 KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300

Query: 301 AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360
           AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA
Sbjct: 301 AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360

Query: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405
           QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED
Sbjct: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 404

[Close]

BLAST of CmoCh11G003570 vs. NCBI nr
Match: XP_022931348.1 (nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 745.3 bits (1923), Expect = 2.7e-211
Identity = 404/405 (99.75%), Postives = 404/405 (99.75%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP-DEETVK 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP DEETVK
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS
Sbjct: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK 360
           TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK 360

Query: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405
           AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED
Sbjct: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405

[Close]

BLAST of CmoCh11G003570 vs. NCBI nr
Match: KAG6587726.1 (60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 731.9 bits (1888), Expect = 3.1e-207
Identity = 395/396 (99.75%), Postives = 395/396 (99.75%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120

Query: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180
           GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK
Sbjct: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180

Query: 181 ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK 240
           ENA TLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK
Sbjct: 181 ENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK 240

Query: 241 KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300
           KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
Sbjct: 241 KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300

Query: 301 AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360
           AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA
Sbjct: 301 AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360

Query: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV 397
           QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV
Sbjct: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV 396

[Close]

BLAST of CmoCh11G003570 vs. NCBI nr
Match: XP_023530908.1 (nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 721.8 bits (1862), Expect = 3.2e-204
Identity = 391/404 (96.78%), Postives = 395/404 (97.77%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120
           FL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE
Sbjct: 61  FLQRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKE 120

Query: 121 GFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180
           G DDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK
Sbjct: 121 GLDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNK 180

Query: 181 ENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSK 240
           EN  T+EENVVKSKKKKKKDGRLLSDENSNQLMTRCSE TLNES GIKTPHEEEHNDKSK
Sbjct: 181 ENVATVEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEETLNESDGIKTPHEEEHNDKSK 240

Query: 241 KRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT 300
           KRKRLASEDLDS TVDQNETEDIKRRKLEGS+GCNDGVQSTKVNTSNELSQQTNEYVEKT
Sbjct: 241 KRKRLASEDLDSHTVDQNETEDIKRRKLEGSEGCNDGVQSTKVNTSNELSQQTNEYVEKT 300

Query: 301 AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKA 360
           AEKTSSKKALKKHSNGSAEPKT NAFQRVKVDAVTFSD+KLADNSYWAK GAETGYGAKA
Sbjct: 301 AEKTSSKKALKKHSNGSAEPKTFNAFQRVKVDAVTFSDDKLADNSYWAKDGAETGYGAKA 360

Query: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405
           QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSD+D
Sbjct: 361 QEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 404

[Close]

BLAST of CmoCh11G003570 vs. NCBI nr
Match: XP_023530907.1 (nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 717.2 bits (1850), Expect = 7.8e-203
Identity = 391/405 (96.54%), Postives = 395/405 (97.53%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP-DEETVK 120
           FL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP DEETVK
Sbjct: 61  FLQRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EG DDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGLDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KEN  T+EENVVKSKKKKKKDGRLLSDENSNQLMTRCSE TLNES GIKTPHEEEHNDKS
Sbjct: 181 KENVATVEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEETLNESDGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDS TVDQNETEDIKRRKLEGS+GCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSHTVDQNETEDIKRRKLEGSEGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAK 360
           TAEKTSSKKALKKHSNGSAEPKT NAFQRVKVDAVTFSD+KLADNSYWAK GAETGYGAK
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTFNAFQRVKVDAVTFSDDKLADNSYWAKDGAETGYGAK 360

Query: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 405
           AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSD+D
Sbjct: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 405

[Close]

BLAST of CmoCh11G003570 vs. TAIR 10
Match: AT5G57120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). )

HSP 1 Score: 170.6 bits (431), Expect = 2.5e-42
Identity = 150/374 (40.11%), Postives = 205/374 (54.81%), Query Frame = 0


Query: 42  KAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLK 101
           K  +L+ EQ+ LLL +V+ +L R GFSK  KK  SEA+IEK   K+L+ SL ++  +  +
Sbjct: 6   KTSALESEQKALLLRSVAQYLERCGFSKCFKKLLSEAEIEK---KELNTSLPDLEEIFSE 65

Query: 102 KCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEK-- 161
                    NK D E    G  +       E  KK K KKK K    ET V++ E EK  
Sbjct: 66  FL-------NKRDHEAAANGNTEANVVEAVENVKKDKKKKKNK----ETKVEVTEEEKVK 125

Query: 162 -SDSVQEEARKKSKDKK--------KKKNKENAVTLEENVVKSKKKKKKDGRLLSDENSN 221
            +D+V E+  K+ K KK        ++K KE    +E+ V + KKKK K   + +D++  
Sbjct: 126 ETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAVIEDGVKEKKKKKSKSKSVEADDDKE 185

Query: 222 QLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEG 281
           ++                          SKKRKR   E+    T D +E E  +R+K E 
Sbjct: 186 KV--------------------------SKKRKRSEPEETKEETEDDDE-ESKRRKKEEN 245

Query: 282 SKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVK 341
               ++GVQ T V    E   + N   EK+  K++++K+ K  SN S EPK    FQRV 
Sbjct: 246 VVENDEGVQETPV---KETETKENGNAEKSETKSTNQKSGKGLSN-SKEPK--KPFQRVN 305

Query: 342 VDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVID 401
           VD + +++     NSY++KGGAE GYG KAQEVLGQV+GRDFRHEKTKKKRGSYRGG+ID
Sbjct: 306 VDEIVYTEN---SNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGGLID 329

Query: 402 LQSHSVKFNYSDED 405
            +SHS KFN SD++
Sbjct: 366 QESHSTKFNNSDDE 329

The following BLAST results are available for this feature:

BLAST of CmoCh11G003570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q14978	1.4e-08	27.59	Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1...	[more]
P41777	1.8e-08	26.97	Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc...	[more]
E9Q5C9	4.0e-08	29.58	Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=...	[more]

BLAST of CmoCh11G003570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETE6	5.2e-213	100.00	nucleolar and coiled-body phosphoprotein 1 isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1EYA7	1.3e-211	99.75	nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1IB66	1.7e-195	94.06	nucleolar and coiled-body phosphoprotein 1 isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1IDS9	4.2e-194	93.83	nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1C0U0	2.3e-144	68.03	nucleolar and coiled-body phosphoprotein 1 isoform X3 OS=Momordica charantia OX=...	[more]

BLAST of CmoCh11G003570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931357.1	1.1e-212	100.00	nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita moschata]	[more]
XP_022931348.1	2.7e-211	99.75	nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita moschata]	[more]
KAG6587726.1	3.1e-207	99.75	60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023530908.1	3.2e-204	96.78	nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita pepo subsp. pep...	[more]
XP_023530907.1	7.8e-203	96.54	nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita pepo subsp. pep...	[more]

BLAST of CmoCh11G003570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57120.1	2.5e-42	40.11	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 50..82 e-value: 0.0015 score: 27.8
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 50..82 score: 9.441557
IPR007718	Srp40, C-terminal	PFAM	PF05022	SRP40_C	coord: 326..398 e-value: 6.7E-27 score: 94.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..205
None	No IPR available	PANTHER	PTHR23216	NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1	coord: 6..404
None	No IPR available	PANTHER	PTHR23216:SF2	LIS1 HOMOLOGY MOTIF, SRP40-RELATED	coord: 6..404

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G003570.1	CmoCh11G003570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005515	protein binding