CmoCh11G003560 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G003560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L7-2-like
Location	Cmo_Chr11: 1746224 .. 1748648 (-)
RNA-Seq Expression	CmoCh11G003560
Synteny	CmoCh11G003560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGGCGGGGATTGAATTTAAGCAGCGTAGGTGAATGTGGACCGTCGATTATCCAGCGCTCGAAACAGAGGAACCTTACAAAACCCTAAAGCCTTCTCATTCTATGCGCTAAGAGCTCCGCAGCCGCGATCCCAACGTTGGAACTTCTGGAACACAAGTATACTACTCTCTCTTCTTCCTTCTTCCTTCTCATCTCGTTTTCGTTATTGTTTCTCGTTGTTTATTGTTCTATAGAATGTACTCCGTTTTCCTCGTAAGTTTTGTATTTCATGATTTCTTAGCATCTGTAGTAATCGCTAGGGTGATAAACGAGGAATGTAATGCGTTTCTTCTTACTTGAAGAATGAGTGCGATGTTTTTTTTGATATCTTGTTGTTATGTTTTTTTGTTTTGTATTTGAGTTGGAAGTGTTAGGGTTTCGATCTTACTATATTTTCTTTCTCTTTTCTGCACTATCGCTTACAGATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGAAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCTGCGAAGAAGAAGAATGCTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAGTATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTACGTAGATCCGGAGGCCAAACTTCTGTTTATCATCAGGATCCGGGGGTGAGTGATTTGGTTTGGAAGACCTTTTTTTGATTACTTGCTCGAATCCTGTTGTATCTGTCTTTATTTTATGTATTGTTTTTGGATTTTCAGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGGTAACGAGTTTATCCATTGATTTCATCTCACACAAAAAGCTTTTGCAGACAATGTCTTCATATATATTCCTTTTGCAATTGGTTCTCTCTATCTTTTGCATTGGCTGGTTTTATACAATCTATGAAATTGGATTAACTAATAACCTGAAGAGTTGATTTAGCCTATGCACTGACCACTTTCCTTGTCTGAGGTATTTGTAAGTTTCTGAGTTAGGTGAGTAATTTTAGTAGAAATACGAATATGAAGGAATAATAGGTTTCTTTGCCTTTTTGCCATTTAATAACTGTTTGAAACATGTACTTGTTTCCATTATGGGCCATTGTTCTGTTATGGAATTCTTTTAGGTAATTGTGCTTCTCGAATGATTGTCTAAATGTTAACTGGTGAAGAAGATTGTGCTATTTCATGATGTTTTGAGTGCTGGAAATTATATTCACCCGCTCCGTTGGCATGTTATGTATGGTTTGCATTTGTGTTTTTTTACTTTCAGCTTACTCTGTGTGTATCATATCAATGCATTGTTTAAACATTTTGATGTTGAATCAAGATTGTTATTGTTGTTTTATTTTGTTTCTTCCAGTGCACCTAGGAATATATATCTCGCATCTATTTTGCTCTGTTTTGTACCTCACTCCTTGCTTACCAACCCTGCAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGCTGCACAGAGTGGAGCCTTATGTCACTTATGGGTATGCTTCACTTGGATTTCTTCTGTTTCTTCTTTTGATTATCTAAAGTTCATAATTAACTCATTGTTTTTCTGAACTGATACTTTCAGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCGTTGACTGACAACTCCATCATCGAGCAGGTTTGTTGCTCGGAGGAATTCTATATTAAGTTCTATGAAAGTATAGCAGTTTGTGTTATTCACAACCTTCCATCCTTAATAACTGCTGTTGGGTGTTTTTTTGTTCAGGCTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAGCTCATCAGAAGGATGAATTAAGATAGTTTTGAGTTTGTTCGTGAGTTTCTGCTGGGCGCTGGGAAAATAGTTCCAATAGGTCTGTCATTTGAAGTTTGGTTCTTGGAATCTCAGAATGTTTTGGTATTTCATTAGTGTACTTCTATCTTCCGAATTTTTATCTTTGAGAATGATTTAAATTTTGGTTATATTAATCAGAGATTTTTCTAAAATTTCGGTTCTACCCGTTTCTAGTTGATGCCTGTGGTTTCATGTTCTTGATTTGCACTCTGTTTACCTTTTTCCGGG

mRNA sequence

ATGGCGACGGCGGGGATTGAATTTAAGCAGCGTAGCGCTCGAAACAGAGGAACCTTACAAAACCCTAAAGCCTTCTCATTCTATGCGCTAAGAGCTCCGCAGCCGCGATCCCAACGTTGGAACTTCTGGAACACAAATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGAAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCTGCGAAGAAGAAGAATGCTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAGTATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTACGTAGATCCGGAGGCCAAACTTCTGTTTATCATCAGGATCCGGGGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGGTAACGAGTTTATCCATTGATTTCATCTCACACAAAAAGCTTTTGCAGACAATGTCTTCATATATATTCCTTTTGCAATTGAAATACGAATATGAAGGAATAATAGGTTTCTTTGCCTTTTTGCCATTTAATAACTGTTTGAAACATAAGATTGTGCTATTTCATGATGTTTTGAGTGCTGGAAATTATATTCACCCGCTCCGTTGGCATGTTATGTATGTGCACCTAGGAATATATATCTCGCATCTATTTTGCTCTGTTTTGTACCTCACTCCTTGCTTACCAACCCTGCAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGCTGCACAGAGTGGAGCCTTATGTCACTTATGGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCGTTGACTGACAACTCCATCATCGAGCAGGCTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAGCTCATCAGAAGGATGAATTAAGATAGTTTTGAGTTTGTTCGTGAGTTTCTGCTGGGCGCTGGGAAAATAGTTCCAATAGGTCTGTCATTTGAAGTTTGGTTCTTGGAATCTCAGAATGTTTTGGTATTTCATTAGTGTACTTCTATCTTCCGAATTTTTATCTTTGAGAATGATTTAAATTTTGGTTATATTAATCAGAGATTTTTCTAAAATTTCGGTTCTACCCGTTTCTAGTTGATGCCTGTGGTTTCATGTTCTTGATTTGCACTCTGTTTACCTTTTTCCGGG

Coding sequence (CDS)

ATGGCGACGGCGGGGATTGAATTTAAGCAGCGTAGCGCTCGAAACAGAGGAACCTTACAAAACCCTAAAGCCTTCTCATTCTATGCGCTAAGAGCTCCGCAGCCGCGATCCCAACGTTGGAACTTCTGGAACACAAATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGAAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCTGCGAAGAAGAAGAATGCTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAGTATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTACGTAGATCCGGAGGCCAAACTTCTGTTTATCATCAGGATCCGGGGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGGTAACGAGTTTATCCATTGATTTCATCTCACACAAAAAGCTTTTGCAGACAATGTCTTCATATATATTCCTTTTGCAATTGAAATACGAATATGAAGGAATAATAGGTTTCTTTGCCTTTTTGCCATTTAATAACTGTTTGAAACATAAGATTGTGCTATTTCATGATGTTTTGAGTGCTGGAAATTATATTCACCCGCTCCGTTGGCATGTTATGTATGTGCACCTAGGAATATATATCTCGCATCTATTTTGCTCTGTTTTGTACCTCACTCCTTGCTTACCAACCCTGCAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGCTGCACAGAGTGGAGCCTTATGTCACTTATGGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCGTTGACTGACAACTCCATCATCGAGCAGGCTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAGCTCATCAGAAGGATGAATTAA

Protein sequence

MATAGIEFKQRSARNRGTLQNPKAFSFYALRAPQPRSQRWNFWNTNMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

Homology

[Close]

BLAST of CmoCh11G003560 vs. ExPASy Swiss-Prot
Match: Q9LHP1 (60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.1e-103
Identity = 206/334 (61.68%), Postives = 225/334 (67.37%), Query Frame = 0


Query: 57  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 116
           VVPESVLKKRKR EEWALA+K+ LEAAKK+NAE RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 117 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLLQ 176
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR                 
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR----------------- 128

Query: 177 TMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVHL 236
                                                                       
Sbjct: 129 ------------------------------------------------------------ 188

Query: 237 GIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELI 296
                                QIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELI
Sbjct: 189 ---------------------QIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELI 244

Query: 297 YKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLK 356
           YKRGFGKLN +RT LTDNSI++Q LGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+LK
Sbjct: 249 YKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLK 244

Query: 357 APLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           APLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 309 APLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of CmoCh11G003560 vs. ExPASy Swiss-Prot
Match: P60040 (60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 7.0e-103
Identity = 208/339 (61.36%), Postives = 225/339 (66.37%), Query Frame = 0


Query: 52  VKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKE 111
           V+   VVPESVLKKRKR EEWAL +K+ +EAAKKKNAENRKLIF RA+ Y+KEY E++KE
Sbjct: 2   VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61

Query: 112 LVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISH 171
           L+ LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR            
Sbjct: 62  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------------ 121

Query: 172 KKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHV 231
                                                                       
Sbjct: 122 ------------------------------------------------------------ 181

Query: 232 MYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKS 291
                                     QIFNGVFLKVNKAT+NML RVEPYVTYG+PNLKS
Sbjct: 182 --------------------------QIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKS 241

Query: 292 VKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLW 351
           VKELIYKRG+GKLN +R  LTDNSI+EQALGK GIIC EDLIHEILTVGPHFKEANNFLW
Sbjct: 242 VKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLW 242

Query: 352 PFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           PF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRMN
Sbjct: 302 PFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242

[Close]

BLAST of CmoCh11G003560 vs. ExPASy Swiss-Prot
Match: P60039 (60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 8.0e-99
Identity = 202/334 (60.48%), Postives = 217/334 (64.97%), Query Frame = 0


Query: 57  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 116
           VVPESVLKK KR EEWALA+K    AAKKK+ E RKLIF RA+ YAKEY E+  EL+RLK
Sbjct: 7   VVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLK 66

Query: 117 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLLQ 176
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR                 
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR----------------- 126

Query: 177 TMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVHL 236
                                                                       
Sbjct: 127 ------------------------------------------------------------ 186

Query: 237 GIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELI 296
                                QIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELI
Sbjct: 187 ---------------------QIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELI 242

Query: 297 YKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLK 356
           YKRG+GKLN +R  LTDNSI++QALGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+LK
Sbjct: 247 YKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLK 242

Query: 357 APLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           APLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 307 APLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

[Close]

BLAST of CmoCh11G003560 vs. ExPASy Swiss-Prot
Match: Q58DT1 (60S ribosomal protein L7 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.6e-67
Identity = 149/343 (43.44%), Postives = 182/343 (53.06%), Query Frame = 0


Query: 48  SSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDE 107
           + E  K  P VPE++ KKRK   E  +   +   A K      RKLI+ +AK Y KEY +
Sbjct: 4   AEEKKKKVPAVPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQ 63

Query: 108 QQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSID 167
             +  +R+ R AR  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLR        
Sbjct: 64  MYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLR-------- 123

Query: 168 FISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPL 227
                                                                       
Sbjct: 124 ------------------------------------------------------------ 183

Query: 228 RWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYP 287
                                         QIFNG F+K+NKA++NML  VEPY+ +GYP
Sbjct: 184 ------------------------------QIFNGTFVKLNKASINMLRIVEPYIAWGYP 243

Query: 288 NLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEAN 347
           NLKSV ELIYKRG+GK+NK+R  LTDN++I ++LGK+GIIC EDLIHEI TVG  FKEAN
Sbjct: 244 NLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEAN 248

Query: 348 NFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN LIRRMN
Sbjct: 304 NFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248

[Close]

BLAST of CmoCh11G003560 vs. ExPASy Swiss-Prot
Match: P14148 (60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2)

HSP 1 Score: 256.9 bits (655), Expect = 3.6e-67
Identity = 148/335 (44.18%), Postives = 179/335 (53.43%), Query Frame = 0


Query: 56  PVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRL 115
           P VPE++ KKR+   E  +   +   A K      RKLI+ +AK Y KEY +  +  +R+
Sbjct: 34  PAVPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRM 93

Query: 116 KREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLL 175
            R AR  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLR                
Sbjct: 94  ARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLR---------------- 153

Query: 176 QTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVH 235
                                                                       
Sbjct: 154 ------------------------------------------------------------ 213

Query: 236 LGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKEL 295
                                 QIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV EL
Sbjct: 214 ----------------------QIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNEL 270

Query: 296 IYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL 355
           IYKRG+GK+NK+R  LTDNS+I ++LGKFGIIC EDLIHEI TVG  FKEANNFLWPFKL
Sbjct: 274 IYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKL 270

Query: 356 KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
            +P GG+KKK  H+VEGGDAGNRE+ IN LIRRMN
Sbjct: 334 SSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270

[Close]

BLAST of CmoCh11G003560 vs. ExPASy TrEMBL
Match: A0A6J1ETP4 (60S ribosomal protein L7-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437634 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 1.2e-121
Identity = 246/344 (71.51%), Postives = 246/344 (71.51%), Query Frame = 0


Query: 47  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 106
           MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 107 EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSI 166
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR       
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------- 120

Query: 167 DFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHP 226
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 227 LRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGY 286
                                          QIFNGVFLKVNKATLNMLHRVEPYVTYGY
Sbjct: 181 -------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTYGY 240

Query: 287 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 346
           PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA
Sbjct: 241 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 246

Query: 347 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 301 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246

[Close]

BLAST of CmoCh11G003560 vs. ExPASy TrEMBL
Match: A0A6J1IG46 (60S ribosomal protein L7-4-like OS=Cucurbita maxima OX=3661 GN=LOC111473079 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 1.0e-120
Identity = 244/344 (70.93%), Postives = 244/344 (70.93%), Query Frame = 0


Query: 47  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 106
           MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKN ENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYD 60

Query: 107 EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSI 166
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR       
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------- 120

Query: 167 DFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHP 226
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 227 LRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGY 286
                                          QIFNGVFLKVNKATLNMLHRVEPYVTYGY
Sbjct: 181 -------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTYGY 240

Query: 287 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 346
           PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQ LGKFGIICAEDLIHEILTVGPHFKEA
Sbjct: 241 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIHEILTVGPHFKEA 246

Query: 347 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 301 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246

[Close]

BLAST of CmoCh11G003560 vs. ExPASy TrEMBL
Match: A0A6J1E1W3 (60S ribosomal protein L7-2 OS=Cucurbita moschata OX=3662 GN=LOC111430031 PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.8e-117
Identity = 240/344 (69.77%), Postives = 241/344 (70.06%), Query Frame = 0


Query: 47  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 106
           MS+EGVK  PVVPESVLKKRKRNEEWALAEKKGL AAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKPNPVVPESVLKKRKRNEEWALAEKKGLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 107 EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSI 166
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR       
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------- 120

Query: 167 DFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHP 226
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 227 LRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGY 286
                                          QIFNGVFLKVNKATLNMLHRVEPYVTYGY
Sbjct: 181 -------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTYGY 240

Query: 287 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 346
           PNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKFGIIC EDLIHEILTVGPHFKEA
Sbjct: 241 PNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICTEDLIHEILTVGPHFKEA 246

Query: 347 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 301 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246

[Close]

BLAST of CmoCh11G003560 vs. ExPASy TrEMBL
Match: A0A5A7U6V9 (60S ribosomal protein L7-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001640 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 3.1e-117
Identity = 235/344 (68.31%), Postives = 244/344 (70.93%), Query Frame = 0


Query: 47  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 106
           MS +GVKGGPVVPESVLKKRKRN+EWALAEK+GLEAAKKKNAENRKLI+NRAKLYAKEYD
Sbjct: 1   MSGDGVKGGPVVPESVLKKRKRNDEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAKEYD 60

Query: 107 EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSI 166
           EQQKEL++LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKT+KILQLLRLR       
Sbjct: 61  EQQKELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLR------- 120

Query: 167 DFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHP 226
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 227 LRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGY 286
                                          QIFNGVFLKVNKATLNMLHRVEPYVTYGY
Sbjct: 181 -------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTYGY 240

Query: 287 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 346
           PNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKFGIICAEDLIHEI+TVGPHFKEA
Sbjct: 241 PNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEIMTVGPHFKEA 246

Query: 347 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 301 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246

[Close]

BLAST of CmoCh11G003560 vs. ExPASy TrEMBL
Match: A0A6J1JDW2 (60S ribosomal protein L7-2 OS=Cucurbita maxima OX=3661 GN=LOC111484921 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 6.8e-117
Identity = 239/344 (69.48%), Postives = 240/344 (69.77%), Query Frame = 0


Query: 47  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 106
           MS+EGVK  PVVPESVLKKRKRNEEWALAEKK L AAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKANPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 107 EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSI 166
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR       
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------- 120

Query: 167 DFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHP 226
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 227 LRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGY 286
                                          QIFNGVFLKVNKATLNMLHRVEPYVTYGY
Sbjct: 181 -------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTYGY 240

Query: 287 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 346
           PNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKFGIIC EDLIHEILTVGPHFKEA
Sbjct: 241 PNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICTEDLIHEILTVGPHFKEA 246

Query: 347 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 301 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246

[Close]

BLAST of CmoCh11G003560 vs. NCBI nr
Match: KAG6587726.1 (60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 519.6 bits (1337), Expect = 2.3e-143
Identity = 280/379 (73.88%), Postives = 281/379 (74.14%), Query Frame = 0


Query: 12  SARNRGTLQNPKAFSFYALRAPQPRSQRWNFWNTNMSSEGVKGGPVVPESVLKKRKRNEE 71
           +ARNRGTLQNPKAFSFYALRAPQPRSQRWNFWNTNMSSEGVKGGPVVPESVLKKRKRNEE
Sbjct: 397 NARNRGTLQNPKAFSFYALRAPQPRSQRWNFWNTNMSSEGVKGGPVVPESVLKKRKRNEE 456

Query: 72  WALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEA 131
           WALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEA
Sbjct: 457 WALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEA 516

Query: 132 KLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLLQTMSSYIFLLQLKYEY 191
           KLLFIIRIRGINAIDPKTKKILQLLRLR                                
Sbjct: 517 KLLFIIRIRGINAIDPKTKKILQLLRLR-------------------------------- 576

Query: 192 EGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVHLGIYISHLFCSVLYLT 251
                                                                       
Sbjct: 577 ------------------------------------------------------------ 636

Query: 252 PCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPL 311
                 QIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPL
Sbjct: 637 ------QIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPL 677

Query: 312 TDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVE 371
           TDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVE
Sbjct: 697 TDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVE 677

Query: 372 GGDAGNRENYINELIRRMN 391
           GGDAGNRENYINELIRRMN
Sbjct: 757 GGDAGNRENYINELIRRMN 677

[Close]

BLAST of CmoCh11G003560 vs. NCBI nr
Match: KAG7021690.1 (60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 447.6 bits (1150), Expect = 1.1e-121
Identity = 247/346 (71.39%), Postives = 247/346 (71.39%), Query Frame = 0


Query: 45  TNMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKE 104
           T MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKE
Sbjct: 16  TAMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKE 75

Query: 105 YDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSL 164
           YDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR     
Sbjct: 76  YDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR----- 135

Query: 165 SIDFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYI 224
                                                                       
Sbjct: 136 ------------------------------------------------------------ 195

Query: 225 HPLRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTY 284
                                            QIFNGVFLKVNKATLNMLHRVEPYVTY
Sbjct: 196 ---------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTY 255

Query: 285 GYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFK 344
           GYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFK
Sbjct: 256 GYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFK 263

Query: 345 EANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           EANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 316 EANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 263

[Close]

BLAST of CmoCh11G003560 vs. NCBI nr
Match: XP_022931467.1 (60S ribosomal protein L7-2-like [Cucurbita moschata] >XP_023530909.1 60S ribosomal protein L7-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.4 bits (1147), Expect = 2.5e-121
Identity = 246/344 (71.51%), Postives = 246/344 (71.51%), Query Frame = 0


Query: 47  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 106
           MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 107 EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSI 166
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR       
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------- 120

Query: 167 DFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHP 226
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 227 LRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGY 286
                                          QIFNGVFLKVNKATLNMLHRVEPYVTYGY
Sbjct: 181 -------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTYGY 240

Query: 287 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 346
           PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA
Sbjct: 241 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 246

Query: 347 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 301 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246

[Close]

BLAST of CmoCh11G003560 vs. NCBI nr
Match: XP_022974403.1 (60S ribosomal protein L7-4-like [Cucurbita maxima])

HSP 1 Score: 443.4 bits (1139), Expect = 2.1e-120
Identity = 244/344 (70.93%), Postives = 244/344 (70.93%), Query Frame = 0


Query: 47  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 106
           MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKN ENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYD 60

Query: 107 EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSI 166
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR       
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------- 120

Query: 167 DFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHP 226
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 227 LRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGY 286
                                          QIFNGVFLKVNKATLNMLHRVEPYVTYGY
Sbjct: 181 -------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTYGY 240

Query: 287 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 346
           PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQ LGKFGIICAEDLIHEILTVGPHFKEA
Sbjct: 241 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIHEILTVGPHFKEA 246

Query: 347 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 301 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246

[Close]

BLAST of CmoCh11G003560 vs. NCBI nr
Match: XP_038880671.1 (60S ribosomal protein L7-2 [Benincasa hispida])

HSP 1 Score: 436.8 bits (1122), Expect = 2.0e-118
Identity = 239/344 (69.48%), Postives = 244/344 (70.93%), Query Frame = 0


Query: 47  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 106
           MS EGVKGGPVVPESVLKKRKRNEEWALAEK+GLEAAKKKNAENRKLI+NRAKLYAKEYD
Sbjct: 1   MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAKEYD 60

Query: 107 EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSI 166
           EQQKEL+RLKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR       
Sbjct: 61  EQQKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------- 120

Query: 167 DFISHKKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHP 226
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 227 LRWHVMYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGY 286
                                          QIFNGVFLKVNKATLNMLHRVEPYVTYGY
Sbjct: 181 -------------------------------QIFNGVFLKVNKATLNMLHRVEPYVTYGY 240

Query: 287 PNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEA 346
           PNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKFGIICAEDLIHEI+TVGPHFKEA
Sbjct: 241 PNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEIMTVGPHFKEA 246

Query: 347 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 301 NNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246

[Close]

BLAST of CmoCh11G003560 vs. TAIR 10
Match: AT3G13580.3 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 378.3 bits (970), Expect = 7.7e-105
Identity = 206/334 (61.68%), Postives = 225/334 (67.37%), Query Frame = 0


Query: 57  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 116
           VVPESVLKKRKR EEWALA+K+ LEAAKK+NAE RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 117 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLLQ 176
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR                 
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR----------------- 128

Query: 177 TMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVHL 236
                                                                       
Sbjct: 129 ------------------------------------------------------------ 188

Query: 237 GIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELI 296
                                QIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELI
Sbjct: 189 ---------------------QIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELI 244

Query: 297 YKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLK 356
           YKRGFGKLN +RT LTDNSI++Q LGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+LK
Sbjct: 249 YKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLK 244

Query: 357 APLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           APLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 309 APLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of CmoCh11G003560 vs. TAIR 10
Match: AT3G13580.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 378.3 bits (970), Expect = 7.7e-105
Identity = 206/334 (61.68%), Postives = 225/334 (67.37%), Query Frame = 0


Query: 57  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 116
           VVPESVLKKRKR EEWALA+K+ LEAAKK+NAE RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 117 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLLQ 176
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR                 
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR----------------- 128

Query: 177 TMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVHL 236
                                                                       
Sbjct: 129 ------------------------------------------------------------ 188

Query: 237 GIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELI 296
                                QIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELI
Sbjct: 189 ---------------------QIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELI 244

Query: 297 YKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLK 356
           YKRGFGKLN +RT LTDNSI++Q LGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+LK
Sbjct: 249 YKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLK 244

Query: 357 APLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           APLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 309 APLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of CmoCh11G003560 vs. TAIR 10
Match: AT3G13580.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 378.3 bits (970), Expect = 7.7e-105
Identity = 206/334 (61.68%), Postives = 225/334 (67.37%), Query Frame = 0


Query: 57  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 116
           VVPESVLKKRKR EEWALA+K+ LEAAKK+NAE RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 117 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLLQ 176
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR                 
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR----------------- 128

Query: 177 TMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVHL 236
                                                                       
Sbjct: 129 ------------------------------------------------------------ 188

Query: 237 GIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELI 296
                                QIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELI
Sbjct: 189 ---------------------QIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELI 244

Query: 297 YKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLK 356
           YKRGFGKLN +RT LTDNSI++Q LGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+LK
Sbjct: 249 YKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLK 244

Query: 357 APLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           APLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 309 APLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of CmoCh11G003560 vs. TAIR 10
Match: AT2G01250.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 375.6 bits (963), Expect = 5.0e-104
Identity = 208/339 (61.36%), Postives = 225/339 (66.37%), Query Frame = 0


Query: 52  VKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKE 111
           V+   VVPESVLKKRKR EEWAL +K+ +EAAKKKNAENRKLIF RA+ Y+KEY E++KE
Sbjct: 2   VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61

Query: 112 LVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISH 171
           L+ LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR            
Sbjct: 62  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR------------ 121

Query: 172 KKLLQTMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHV 231
                                                                       
Sbjct: 122 ------------------------------------------------------------ 181

Query: 232 MYVHLGIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKS 291
                                     QIFNGVFLKVNKAT+NML RVEPYVTYG+PNLKS
Sbjct: 182 --------------------------QIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKS 241

Query: 292 VKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLW 351
           VKELIYKRG+GKLN +R  LTDNSI+EQALGK GIIC EDLIHEILTVGPHFKEANNFLW
Sbjct: 242 VKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLW 242

Query: 352 PFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           PF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRMN
Sbjct: 302 PFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242

[Close]

BLAST of CmoCh11G003560 vs. TAIR 10
Match: AT2G44120.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 362.1 bits (928), Expect = 5.7e-100
Identity = 202/334 (60.48%), Postives = 217/334 (64.97%), Query Frame = 0


Query: 57  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 116
           VVPESVLKK KR EEWALA+K    AAKKK+ E RKLIF RA+ YAKEY E+  EL+RLK
Sbjct: 7   VVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLK 66

Query: 117 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQVTSLSIDFISHKKLLQ 176
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR                 
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLR----------------- 126

Query: 177 TMSSYIFLLQLKYEYEGIIGFFAFLPFNNCLKHKIVLFHDVLSAGNYIHPLRWHVMYVHL 236
                                                                       
Sbjct: 127 ------------------------------------------------------------ 186

Query: 237 GIYISHLFCSVLYLTPCLPTLQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELI 296
                                QIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELI
Sbjct: 187 ---------------------QIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELI 242

Query: 297 YKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLK 356
           YKRG+GKLN +R  LTDNSI++QALGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+LK
Sbjct: 247 YKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLK 242

Query: 357 APLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 391
           APLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 307 APLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

The following BLAST results are available for this feature:

BLAST of CmoCh11G003560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHP1	1.1e-103	61.68	60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1	[more]
P60040	7.0e-103	61.36	60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1	[more]
P60039	8.0e-99	60.48	60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1	[more]
Q58DT1	3.6e-67	43.44	60S ribosomal protein L7 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1	[more]
P14148	3.6e-67	44.18	60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2	[more]

BLAST of CmoCh11G003560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETP4	1.2e-121	71.51	60S ribosomal protein L7-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437634 PE...	[more]
A0A6J1IG46	1.0e-120	70.93	60S ribosomal protein L7-4-like OS=Cucurbita maxima OX=3661 GN=LOC111473079 PE=3...	[more]
A0A6J1E1W3	1.8e-117	69.77	60S ribosomal protein L7-2 OS=Cucurbita moschata OX=3662 GN=LOC111430031 PE=3 SV...	[more]
A0A5A7U6V9	3.1e-117	68.31	60S ribosomal protein L7-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1JDW2	6.8e-117	69.48	60S ribosomal protein L7-2 OS=Cucurbita maxima OX=3661 GN=LOC111484921 PE=3 SV=1	[more]

BLAST of CmoCh11G003560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587726.1	2.3e-143	73.88	60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7021690.1	1.1e-121	71.39	60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022931467.1	2.5e-121	71.51	60S ribosomal protein L7-2-like [Cucurbita moschata] >XP_023530909.1 60S ribosom...	[more]
XP_022974403.1	2.1e-120	70.93	60S ribosomal protein L7-4-like [Cucurbita maxima]	[more]
XP_038880671.1	2.0e-118	69.48	60S ribosomal protein L7-2 [Benincasa hispida]	[more]

BLAST of CmoCh11G003560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13580.3	7.7e-105	61.68	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.2	7.7e-105	61.68	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.1	7.7e-105	61.68	Ribosomal protein L30/L7 family protein	[more]
AT2G01250.1	5.0e-104	61.36	Ribosomal protein L30/L7 family protein	[more]
AT2G44120.1	5.7e-100	60.48	Ribosomal protein L30/L7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 98..122
None	No IPR available	PANTHER	PTHR11524:SF47	60S RIBOSOMAL PROTEIN L7-RELATED	coord: 257..390
None	No IPR available	PANTHER	PTHR11524:SF47	60S RIBOSOMAL PROTEIN L7-RELATED	coord: 38..162
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	GENE3D	3.30.1390.20		coord: 133..194 e-value: 5.1E-6 score: 29.0
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	GENE3D	3.30.1390.20		coord: 253..390 e-value: 5.5E-20 score: 73.8
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	SUPERFAMILY	55129	Ribosomal protein L30p/L7e	coord: 257..390
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	SUPERFAMILY	55129	Ribosomal protein L30p/L7e	coord: 133..166
IPR012988	Ribosomal protein L30, N-terminal	PFAM	PF08079	Ribosomal_L30_N	coord: 58..129 e-value: 1.3E-24 score: 86.2
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	PFAM	PF00327	Ribosomal_L30	coord: 134..161 e-value: 2.1E-8 score: 33.9
IPR039699	Ribosomal protein L7/L30	PANTHER	PTHR11524	60S RIBOSOMAL PROTEIN L7	coord: 257..390
IPR039699	Ribosomal protein L7/L30	PANTHER	PTHR11524	60S RIBOSOMAL PROTEIN L7	coord: 38..162
IPR035808	Ribosomal protein L7, eukaryotic/archaeal	CDD	cd01657	Ribosomal_L7_archeal_euk	coord: 133..390 e-value: 2.91791E-73 score: 223.558

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G003560.1	CmoCh11G003560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome