CmoCh11G003220 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G003220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein VAR3, chloroplastic
Location	Cmo_Chr11: 1564019 .. 1567985 (+)
RNA-Seq Expression	CmoCh11G003220
Synteny	CmoCh11G003220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCCTACAAAATTCCTACACTTCGGCACTGCAATCTCCCGAGCAACATCCAGATCTCTATCGCCACTCCTCTTCCCCAGAAGATTCTTCATCAAGTGCAGCTCTTCTACTACGCTAGATTCCGCCGGCGACGGCGGCGGCGTTGATGCGCCTCAACCACACTCCAGCCTCATTCACCACCCCTGGCCTGAATGGATTTCCTTTGTCGACGGCCTGAAGACCAAAGGTTACTTGATCGAACCTCCTTCGGAAGATGCAAACGGAGATGGGAGCAGTAGTGATGCAGTTACGCCATCCGAGACTGATTACAGCGACATGAACGTGCTGAAGGATGCTTGCCTTAGCTTTGCGCGCGACCGCCACGATATTTTAGAGTGAGTTTTCCTTTTAGAATTGTTGAATTGAAATTGGATTTGATACTGACATAGTGATGGTTGCATTATTTGGGAATGTACGAAGTTTCTGTGGTAACGGTCAAAGCCCACGACTAGCGAATAATGTCAGTTTTAGCCATTACGTATAGCCGTTAACTTCATAATTGTAAAGCCCTGTCTGTTAGAGAGAGTTTTCCACAACACTCCAACCGATGTGTGATCTCACAGTCCACTCCACTTGGGAGCCCAACATCCTTGCTAGCACACCATCCAATCTTACGGTTGATACCATTTGTAACAGCCGAAGCCTACCGCTAGCAAATATTATCCACTTTGGCCCATTACACATCATCGTTAGCTTTAAAACCCGTATGTTAGGAAGAGTTTTCTACTCCAACCGATGTGGGATCTCACACGGGTACATTTCTCATGGCTCGACTAGAATCCTTCACTGTTCTTCGTGCAGGTCATTGTCCAGAGATGATATTCAAACGGTAATGAAGGATGGATGTCCCAATCTCTTCCGGAAAGTTGTCAATTCAGCTAAAAGGTTAAGGGCTTATGTGCATCTAGATGAAGGGGAGGCATGTATTCTCACTTAAACATCACAATTATTTTGCCATATAAGGCCTGTGTTTCATTTGAGTGTATCTACTCTGTACAGGTTTGTAGTACTTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATTATGAAGGAAACAGAAGCTGCAAGAACTGTGGATGTAGCTAGAATATTGTTGGCCTATGCATTGGATCCACTTGTTTTGTCTGGAGGGGACAAAGCTTTGGGTAGAGAGCATGTCGAAGTCTCTATCAGGAAATTGCTTTCTGAGATATCTGAACTGAGTGAAGAACCCATTGAGGCAGCTGCAGCAGTGAAGGCTGATACAAAAACTCCATCAAGAAAAGAAACGCCTTCAAAACTTACAAATGATGCATTGTATAAAGATGTTGAGATGAAAAGAGGAGATTGGATGTGCTCAAAGTAAGTTATATCTAAACTTCTTTTCTGTATTAGCTTGAATTTCTATGTTTTGTTTGATGTGAAAAACAATGGCATACTGGATAGTATTGTTAGTGTCTGTGCTTTGAGTTGGAGCTAGAAAGCAGGTACAAAGCTAATTTAGCTCAACTAATTTTGTGTGAAATTCGACGTTGGTTGAGAAGGAGAACGAAGCATTCTTTATAAGAATGTGGAAACCCCCTCCTAGCGCGTTTTAAAGACCTTGAGGGATTGAGGGAAAGTTTGAAAGGGAAAGTCCAAAAAGGATAATATCTGCTAGCAATGGATTTGGACGGTTACAAATGGTATCAGAGCTAGATACTGAGCGGTGTGTCAGCGAGGACGCTGAGCTTCGAAGGGGGGTGGATTGTGAGATCCCATATCGGTTGGGAAGGAGAATGAAGCGGGGGGTGAGGACAATATCTGCTAGCGGTGGGTTTGGGCTGTTACAAATGGTATCAAAGCTAGACACCAAACGGTGTGCCAGCAAGGACGCTGAACTATGAAGGGGGGTGGATTGTGAGATCCCACATCAATTGGGAAGGAGAATGAAGCTGGGGTAAGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGCTAGACACCAAGCGGTGTGCCAGCAAGGACGCTGAACTATGAAGGGGGGTGGATTGTGAGATCCCACATCAATTGGGAAGGAAAATGAAGCTGGGGTAAGGACAATATCTGCTAGCGGTGGGCTTGGGCTATTACAAATGGTATCAAAGCTAGACACCAAGCGGTGTGCCAGCAAGGACGCTGAACTATGACGGGGGGTGGATTGTGAGATCCCATATCAATTGGGAAGGAAAATGAAGCTGGGGTAAGGACAATATCTGCTAGCGGTGGGCTTTGGCTGTTACAAATGACATAAGAACTAGACACCGAGCAGTGTGCTAGCGAGGATGTTGGCCCCCTAAGGGGGATGGATTGTGAGATCCCACATCGGTTGGGGAGGAAAACGAAGCATGTTGGCCCCCTAAGGGGGATGGATTGTGAGATCCCACATCGGTTGGGGAGGAAAACGAAGCATTCTTTATAAGAATATGAAAACTTCTTCCTAGCATACATGTTATAAAAATAAAAGTCCGAAAAAGACAACATCTACTGGCGGTAGGCTTGGGCTGTTACACAGATCCTATTTATTTAACTTCTAATCTGTTTAGTTTTAACCTATGTTTTTGCAGGTGCAATTTTTTGAATTTTTCAAGAAACAAAAGATGTTTAAAATGCAATGAAGAAGGTCCTAAAAGAGTTGGGGCAGATGATATAGAAATGAAGAGCGGAGATTGGATCTGCCCAGAGTAAGAACATGCTCAATCTTGCTCACAGATAGTTCAGTTTTTGAATATTTGTACTTTCTCTACTGACCTTATAGATAAATTAGGCAACAAATATAAAGTATTATCATCCATGATTGAACTCTTGCATGTTCTGTTGATTCTGTAATAGGTGTAAATTCATGAACTTCTCAAGAAACATTCAGTGCTTAAAGTGCAAAAGCAAGAGGCCGAAGAAGATTAATAATGTTGATGAAATTGAAATGAAGAAGGGAGATTGGATCTGCCCGCAGTAAGTACATAACACTTATCTGACAAAATGACATGGAGAGGAGCTTATCTAAGTGAAACTTGTTTCAGATGTGAATTCATGAACTTTGCGAGTAAGAAGGAATGCTTGCGATGCCGAGAACATCGTCCAAAGAGGGAGCTGAGTCCAGGAGAATGGGAATGCCCCTCGTGAGTTTGGTTACCATCTCTTGCACCCATATGTTTTGATTTTGGGATTGGCCTTTCAAGTTACAAAAGCATTAATGCCAAAGCATTTGCCTTCTGTAGATGTGACATTTTTAATTACAGACGGAACATGATGTGCCGCAACTGCAATTGTGAGCGCCCTACACAAGAAATAAGCGCGGAGTGCCAGGAACATCTATGGGAGTCACCCACGGAAAGGTGAACCAACTATTTTATGCCATTATTTTGGCTCCAAGTATATCAATTTTCTCTCTTTCCAATTCCATGGGATGTTTATTCACTTGATGAGTATTGCCGCTCCAAGTAGTCTAGAAATGAGGGTTTTATCCATTCAAGGAAGTTCATTATTTTTTTTATTTTTTATTTTTGGTGTGATCTTCCTCTTCGGTTTTCCTTTCGCTTCACACAATTTTAAAACGCATCTACTAGAGATTTCAGGGAACGCTTCGTTTCAGGAAATGCTTCGTTCTCTTTTCACAATTTTAAAACTCATTTACTAGAGAGGTTTAAGGGAATGTTTAATTCTCTTCTTCGATCGGTGTGGGATCTCACAATCCAGTTCGTTCCGTCCTGTCGTCGCCTTCACAATGGATCTCACAGTGCCTGACTCTGATACCATATTGTCATTTATAATAATTGTCCGCTTATGTTACATATAGTCATTCTGGCCACCGCTGATATTGTCCACTTATGTTACATATAGTCATTTTGGCTCTGATATCTTAGTGTATGGCTCTGTTACATATAATATTGTCCACTTATGTTACATA

mRNA sequence

ATGTCCCCTACAAAATTCCTACACTTCGGCACTGCAATCTCCCGAGCAACATCCAGATCTCTATCGCCACTCCTCTTCCCCAGAAGATTCTTCATCAAGTGCAGCTCTTCTACTACGCTAGATTCCGCCGGCGACGGCGGCGGCGTTGATGCGCCTCAACCACACTCCAGCCTCATTCACCACCCCTGGCCTGAATGGATTTCCTTTGTCGACGGCCTGAAGACCAAAGGTTACTTGATCGAACCTCCTTCGGAAGATGCAAACGGAGATGGGAGCAGTAGTGATGCAGTTACGCCATCCGAGACTGATTACAGCGACATGAACGTGCTGAAGGATGCTTGCCTTAGCTTTGCGCGCGACCGCCACGATATTTTAGAGTCATTGTCCAGAGATGATATTCAAACGGTAATGAAGGATGGATGTCCCAATCTCTTCCGGAAAGTTGTCAATTCAGCTAAAAGGTTAAGGGCTTATGTGCATCTAGATGAAGGGGAGGTTTGTAGTACTTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATTATGAAGGAAACAGAAGCTGCAAGAACTGTGGATGTAGCTAGAATATTGTTGGCCTATGCATTGGATCCACTTGTTTTGTCTGGAGGGGACAAAGCTTTGGGTAGAGAGCATGTCGAAGTCTCTATCAGGAAATTGCTTTCTGAGATATCTGAACTGAGTGAAGAACCCATTGAGGCAGCTGCAGCAGTGAAGGCTGATACAAAAACTCCATCAAGAAAAGAAACGCCTTCAAAACTTACAAATGATGCATTGTATAAAGATGTTGAGATGAAAAGAGGAGATTGGATGTGCTCAAAGTGCAATTTTTTGAATTTTTCAAGAAACAAAAGATGTTTAAAATGCAATGAAGAAGGTCCTAAAAGAGTTGGGGCAGATGATATAGAAATGAAGAGCGGAGATTGGATCTGCCCAGAGTGTAAATTCATGAACTTCTCAAGAAACATTCAGTGCTTAAAGTGCAAAAGCAAGAGGCCGAAGAAGATTAATAATGTTGATGAAATTGAAATGAAGAAGGGAGATTGGATCTGCCCGCAATGTGAATTCATGAACTTTGCGAGTAAGAAGGAATGCTTGCGATGCCGAGAACATCGTCCAAAGAGGGAGCTGAGTCCAGGAGAATGGGAATGCCCCTCATGTGACATTTTTAATTACAGACGGAACATGATGTGCCGCAACTGCAATTGTGAGCGCCCTACACAAGAAATAAGCGCGGAGTGCCAGGAACATCTATGGGAGTCACCCACGGAAAGGTGAACCAACTATTTTATGCCATTATTTTGGCTCCAAGTATATCAATTTTCTCTCTTTCCAATTCCATGGGATGTTTATTCACTTGATGAGTATTGCCGCTCCAAGTAGTCTAGAAATGAGGGTTTTATCCATTCAAGGAAGTTCATTATTTTTTTTATTTTTTATTTTTGGTGTGATCTTCCTCTTCGGTTTTCCTTTCGCTTCACACAATTTTAAAACGCATCTACTAGAGATTTCAGGGAACGCTTCGTTTCAGGAAATGCTTCGTTCTCTTTTCACAATTTTAAAACTCATTTACTAGAGAGGTTTAAGGGAATGTTTAATTCTCTTCTTCGATCGGTGTGGGATCTCACAATCCAGTTCGTTCCGTCCTGTCGTCGCCTTCACAATGGATCTCACAGTGCCTGACTCTGATACCATATTGTCATTTATAATAATTGTCCGCTTATGTTACATATAGTCATTCTGGCCACCGCTGATATTGTCCACTTATGTTACATATAGTCATTTTGGCTCTGATATCTTAGTGTATGGCTCTGTTACATATAATATTGTCCACTTATGTTACATA

Coding sequence (CDS)

ATGTCCCCTACAAAATTCCTACACTTCGGCACTGCAATCTCCCGAGCAACATCCAGATCTCTATCGCCACTCCTCTTCCCCAGAAGATTCTTCATCAAGTGCAGCTCTTCTACTACGCTAGATTCCGCCGGCGACGGCGGCGGCGTTGATGCGCCTCAACCACACTCCAGCCTCATTCACCACCCCTGGCCTGAATGGATTTCCTTTGTCGACGGCCTGAAGACCAAAGGTTACTTGATCGAACCTCCTTCGGAAGATGCAAACGGAGATGGGAGCAGTAGTGATGCAGTTACGCCATCCGAGACTGATTACAGCGACATGAACGTGCTGAAGGATGCTTGCCTTAGCTTTGCGCGCGACCGCCACGATATTTTAGAGTCATTGTCCAGAGATGATATTCAAACGGTAATGAAGGATGGATGTCCCAATCTCTTCCGGAAAGTTGTCAATTCAGCTAAAAGGTTAAGGGCTTATGTGCATCTAGATGAAGGGGAGGTTTGTAGTACTTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATTATGAAGGAAACAGAAGCTGCAAGAACTGTGGATGTAGCTAGAATATTGTTGGCCTATGCATTGGATCCACTTGTTTTGTCTGGAGGGGACAAAGCTTTGGGTAGAGAGCATGTCGAAGTCTCTATCAGGAAATTGCTTTCTGAGATATCTGAACTGAGTGAAGAACCCATTGAGGCAGCTGCAGCAGTGAAGGCTGATACAAAAACTCCATCAAGAAAAGAAACGCCTTCAAAACTTACAAATGATGCATTGTATAAAGATGTTGAGATGAAAAGAGGAGATTGGATGTGCTCAAAGTGCAATTTTTTGAATTTTTCAAGAAACAAAAGATGTTTAAAATGCAATGAAGAAGGTCCTAAAAGAGTTGGGGCAGATGATATAGAAATGAAGAGCGGAGATTGGATCTGCCCAGAGTGTAAATTCATGAACTTCTCAAGAAACATTCAGTGCTTAAAGTGCAAAAGCAAGAGGCCGAAGAAGATTAATAATGTTGATGAAATTGAAATGAAGAAGGGAGATTGGATCTGCCCGCAATGTGAATTCATGAACTTTGCGAGTAAGAAGGAATGCTTGCGATGCCGAGAACATCGTCCAAAGAGGGAGCTGAGTCCAGGAGAATGGGAATGCCCCTCATGTGACATTTTTAATTACAGACGGAACATGATGTGCCGCAACTGCAATTGTGAGCGCCCTACACAAGAAATAAGCGCGGAGTGCCAGGAACATCTATGGGAGTCACCCACGGAAAGGTGA

Protein sequence

MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIHHPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARDRHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAYVIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIEAAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEGPKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQCEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAECQEHLWESPTER

Homology

[Close]

BLAST of CmoCh11G003220 vs. ExPASy Swiss-Prot
Match: Q8S9K3 (Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 PE=1 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 1.7e-33
Identity = 93/278 (33.45%), Postives = 146/278 (52.52%), Query Frame = 0


Query: 64  PEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARDRHD 123
           PEW   +  L   GY     S+  +  G  S+   P   D      L  ACL+ AR+R +
Sbjct: 93  PEWTELLQSLSKAGYF----SDSGSISGLESE-FFPGFPDELLRPAL--ACLALARERPE 152

Query: 124 ILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAYVIM 183
           +LE LSR D++ ++++G P LF+   +S KR+  Y             LR        +M
Sbjct: 153 LLEMLSRRDVEVLVENGKPFLFKTGPDSLKRMSLY-------------LRSGLQGIGKLM 212

Query: 184 KETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIEAAA 243
            + E A TVD+ R++L+Y +D +  S   K   +E +E S+R LLS+I+++S  P E+  
Sbjct: 213 -DMEKASTVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLRPPESNV 272

Query: 244 AVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEGPKR 303
                 +   R     +    +   +VEMKRGDW+CS+C+ +NF+RN +C +C+E  PKR
Sbjct: 273 HDTMQNQYSDRDGQGVR----SFQNNVEMKRGDWICSRCSGMNFARNVKCFQCDEARPKR 332

Query: 304 VGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPK 342
                 ++   +W CP+C F N+ RN+ CL+C  KRP+
Sbjct: 333 ------QLTGSEWECPQCDFYNYGRNVACLRCDCKRPR 338

[Close]

BLAST of CmoCh11G003220 vs. ExPASy TrEMBL
Match: A0A6J1EBY3 (zinc finger protein VAR3, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432931 PE=4 SV=1)

HSP 1 Score: 899.0 bits (2322), Expect = 7.5e-258
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG
Sbjct: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
           PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ
Sbjct: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420

Query: 421 CQEHLWESPTER 433
           CQEHLWESPTER
Sbjct: 421 CQEHLWESPTER 432

[Close]

BLAST of CmoCh11G003220 vs. ExPASy TrEMBL
Match: A0A6J1EFG2 (zinc finger protein VAR3, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432931 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 1.2e-250
Identity = 425/432 (98.38%), Postives = 425/432 (98.38%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG
Sbjct: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
           PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ
Sbjct: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPS       RNMMCRNCNCERPTQEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPS-------RNMMCRNCNCERPTQEISAE 420

Query: 421 CQEHLWESPTER 433
           CQEHLWESPTER
Sbjct: 421 CQEHLWESPTER 425

[Close]

BLAST of CmoCh11G003220 vs. ExPASy TrEMBL
Match: A0A6J1EBZ3 (zinc finger protein VAR3, chloroplastic-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432931 PE=4 SV=1)

HSP 1 Score: 792.0 bits (2044), Expect = 1.3e-225
Identity = 393/432 (90.97%), Postives = 393/432 (90.97%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSK                   
Sbjct: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSK------------------- 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
                               CKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ
Sbjct: 301 --------------------CKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 393

Query: 421 CQEHLWESPTER 433
           CQEHLWESPTER
Sbjct: 421 CQEHLWESPTER 393

[Close]

BLAST of CmoCh11G003220 vs. ExPASy TrEMBL
Match: A0A6J1KWE3 (zinc finger protein VAR3, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497775 PE=4 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 1.5e-210
Identity = 374/432 (86.57%), Postives = 377/432 (87.27%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFI CSSSTTLDSAGD GGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFINCSSSTTLDSAGD-GGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLK KGYLIEPPSEDANGDGS  DAVTPSETDY+DMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKAKGYLIEPPSEDANGDGSGGDAVTPSETDYNDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVC TCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCGTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKE PSKLTNDAL KDVEMKRGDWMCSK                   
Sbjct: 241 AAAAVKADTKTPSRKEKPSKLTNDALSKDVEMKRGDWMCSK------------------- 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
                               CKFMNFSRNI CLKCKSKRPKK+ NV+EI MKKGDWICPQ
Sbjct: 301 --------------------CKFMNFSRNIHCLKCKSKRPKKM-NVEEIGMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPSCD  NYRRNMMCRNCNCERP QEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDFLNYRRNMMCRNCNCERPKQEISAE 391

Query: 421 CQEHLWESPTER 433
            QE LWESPTER
Sbjct: 421 NQERLWESPTER 391

[Close]

BLAST of CmoCh11G003220 vs. ExPASy TrEMBL
Match: A0A6J1KZP8 (zinc finger protein VAR3, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497775 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.6e-204
Identity = 369/432 (85.42%), Postives = 372/432 (86.11%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFI CSSSTTLDSAGD GGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFINCSSSTTLDSAGD-GGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLK KGYLIEPPSEDANGDGS  DAVTPSETDY+DMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKAKGYLIEPPSEDANGDGSGGDAVTPSETDYNDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVC TCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCGTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKE PSKLTNDAL KDVEMKRGDWMCSK                   
Sbjct: 241 AAAAVKADTKTPSRKEKPSKLTNDALSKDVEMKRGDWMCSK------------------- 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
                               CKFMNFSRNI CLKCKSKRPKK+ NV+EI MKKGDWICPQ
Sbjct: 301 --------------------CKFMNFSRNIHCLKCKSKRPKKM-NVEEIGMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPS       RNMMCRNCNCERP QEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPS-------RNMMCRNCNCERPKQEISAE 384

Query: 421 CQEHLWESPTER 433
            QE LWESPTER
Sbjct: 421 NQERLWESPTER 384

[Close]

BLAST of CmoCh11G003220 vs. NCBI nr
Match: XP_022925532.1 (zinc finger protein VAR3, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 899.0 bits (2322), Expect = 1.5e-257
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG
Sbjct: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
           PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ
Sbjct: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420

Query: 421 CQEHLWESPTER 433
           CQEHLWESPTER
Sbjct: 421 CQEHLWESPTER 432

[Close]

BLAST of CmoCh11G003220 vs. NCBI nr
Match: KAG6587690.1 (Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 875.5 bits (2261), Expect = 1.8e-250
Identity = 424/432 (98.15%), Postives = 426/432 (98.61%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKE PSKLTNDAL KDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG
Sbjct: 241 AAAAVKADTKTPSRKEKPSKLTNDALSKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
           PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKK+ N+DEI MKKGDWICPQ
Sbjct: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKM-NIDEIGMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420

Query: 421 CQEHLWESPTER 433
            Q HLWESPTER
Sbjct: 421 YQAHLWESPTER 431

[Close]

BLAST of CmoCh11G003220 vs. NCBI nr
Match: XP_022925533.1 (zinc finger protein VAR3, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 875.2 bits (2260), Expect = 2.4e-250
Identity = 425/432 (98.38%), Postives = 425/432 (98.38%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG
Sbjct: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
           PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ
Sbjct: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPS       RNMMCRNCNCERPTQEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPS-------RNMMCRNCNCERPTQEISAE 420

Query: 421 CQEHLWESPTER 433
           CQEHLWESPTER
Sbjct: 421 CQEHLWESPTER 425

[Close]

BLAST of CmoCh11G003220 vs. NCBI nr
Match: XP_023529383.1 (zinc finger protein VAR3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023529384.1 zinc finger protein VAR3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 862.4 bits (2227), Expect = 1.6e-246
Identity = 419/432 (96.99%), Postives = 421/432 (97.45%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGD  GVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGD-DGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAV+PSETDYSDMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVSPSETDYSDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVD+ARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDIARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKE PSKLTNDAL KDVEMKRGDWMCSKCNFLNFSRNKRCLKC EEG
Sbjct: 241 AAAAVKADTKTPSRKEKPSKLTNDALSKDVEMKRGDWMCSKCNFLNFSRNKRCLKCKEEG 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
           PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKR KKINNVDEI MKKGDWICPQ
Sbjct: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRRKKINNVDEIGMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCRE RPKRELSPGEWECPSCD FNYRRNMMCRNCNCERP QEISAE
Sbjct: 361 CEFMNFASKKECLRCRERRPKRELSPGEWECPSCDFFNYRRNMMCRNCNCERPRQEISAE 420

Query: 421 CQEHLWESPTER 433
            QEHLWESPTER
Sbjct: 421 YQEHLWESPTER 431

[Close]

BLAST of CmoCh11G003220 vs. NCBI nr
Match: KAG7021655.1 (Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 851.7 bits (2199), Expect = 2.8e-243
Identity = 417/432 (96.53%), Postives = 419/432 (96.99%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60
           MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH
Sbjct: 1   MSPTKFLHFGTAISRATSRSLSPLLFPRRFFIKCSSSTTLDSAGDGGGVDAPQPHSSLIH 60

Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD
Sbjct: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY
Sbjct: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
           VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE
Sbjct: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           AAAAVKADTKTPSRKE PSKLTNDAL KDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG
Sbjct: 241 AAAAVKADTKTPSRKEKPSKLTNDALSKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
           PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKK+ N+DEI MKKGDWICPQ
Sbjct: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKM-NIDEIGMKKGDWICPQ 360

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAE 420
           CEFMNFASKKECLRCREHRPKRELSPGEWECPS       RNMMCRNCNCERPTQEISAE
Sbjct: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPS-------RNMMCRNCNCERPTQEISAE 420

Query: 421 CQEHLWESPTER 433
            Q HLWESPTER
Sbjct: 421 YQAHLWESPTER 424

[Close]

BLAST of CmoCh11G003220 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 384.4 bits (986), Expect = 1.2e-106
Identity = 215/475 (45.26%), Postives = 282/475 (59.37%), Query Frame = 0


Query: 1   MSPTKFLHFGTAISRATSRSLSPLLFPR----RFFIKCSSSTTLDSAGDGGGVDAPQPHS 60
           MS ++    G +I R    S  PL F R        +C SS    +A     VD+  P  
Sbjct: 1   MSSSRIFLVGNSIFRPHKPSF-PLSFNRFPSVSLRFRCFSSDA--AAAVATTVDSDSP-- 60

Query: 61  SLIHHPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLS 120
           SL  HPWPEWI+FVD LKTKGY  +   +D               T Y +M ++KDACLS
Sbjct: 61  SLTPHPWPEWITFVDRLKTKGYFTKDTEDD---------------TVYQEMILVKDACLS 120

Query: 121 FARDRHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSC 180
           FARDR+D+L SLS  D+Q +++ GCPNLFRK VNS+KR+RA+V L+EG+VC +C+LR SC
Sbjct: 121 FARDRYDVLRSLSSGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSSC 180

Query: 181 DRAYVIMKETEA-ARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELS 240
           DRAYVI+K+TEA ARTVDV R+LL  ALD +V+S G+   G+E V  S R+LL E+ E S
Sbjct: 181 DRAYVILKDTEADARTVDVMRLLLFNALDSIVISRGEVPPGKELVHESARRLLLELVEFS 240

Query: 241 EEPIEAA----------------------------AAVKADTKTP-------SRKETPS- 300
           E+P+  A                             A K+    P       SR + PS 
Sbjct: 241 EKPLIPALPKPSSKESSLPSKERAFKSRNDEPSQRVAFKSRNDDPSQRVAFKSRNDEPSH 300

Query: 301 ----KLTND-ALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEGPKRVGADDIEMKSG 360
               K  ND +  +D  +   DW C KC+F+NF+RN+RC +CNE   +R  A    +K G
Sbjct: 301 RVAFKSRNDESSQRDRPLYSADWACPKCDFVNFARNERCRECNEVADRRPVA--AVVKEG 360

Query: 361 DWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQCEFMNFASKKECLR 420
           DW+CPEC F+NF+RN  CLKCK+K PKK + V+ +EMKKGDW C  C +MNFAS K+C  
Sbjct: 361 DWLCPECSFLNFTRNQSCLKCKAKGPKKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCRE 420

Query: 421 CREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCERPTQEISAECQEHLWESP 430
           CRE R K    PG+WECPSCD  N+RRN  C+ C C+RP+Q  + + ++H W+ P
Sbjct: 421 CREQRHKTLAEPGDWECPSCDFVNFRRNDACKKCECKRPSQ-ANNDQEDHTWKRP 452

[Close]

BLAST of CmoCh11G003220 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 243.8 bits (621), Expect = 2.5e-64
Identity = 130/352 (36.93%), Postives = 191/352 (54.26%), Query Frame = 0


Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEW+  +  L  KGY                +++ P  +   + N ++ ACL+FAR 
Sbjct: 44  HPWPEWLDLMGMLAKKGYF--------------EESLIPLMSS-KESNHIRTACLNFARH 103

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           R  ++ +LS+ DI+ +   GCP+  RKVVNS KRLRAYV +DEG VC +CNLRG C+RAY
Sbjct: 104 RFTLVRNLSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAY 163

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
              ++ E ART+DV R+LL Y LD +  +  ++A   + VE S+RKLL E    S    E
Sbjct: 164 AQARDDEGARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDFE 223

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           +     A+T+T   +  P+  + D   +D   + GDW C++C FLNF++N RCL+C+   
Sbjct: 224 S-----AETETAGDELQPN--SQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFS 283

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
            +R+                                  +  K    D + +KKGDWIC  
Sbjct: 284 EERL----------------------------------KQLKEEQKDHLPLKKGDWICQT 339

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCER 413
           C F+NF+    CLRC++    R+++PGEWEC SC+  N+RRN +C  C+ +R
Sbjct: 344 CNFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKR 339

[Close]

BLAST of CmoCh11G003220 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 243.8 bits (621), Expect = 2.5e-64
Identity = 130/352 (36.93%), Postives = 191/352 (54.26%), Query Frame = 0


Query: 61  HPWPEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARD 120
           HPWPEW+  +  L  KGY                +++ P  +   + N ++ ACL+FAR 
Sbjct: 44  HPWPEWLDLMGMLAKKGYF--------------EESLIPLMSS-KESNHIRTACLNFARH 103

Query: 121 RHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAY 180
           R  ++ +LS+ DI+ +   GCP+  RKVVNS KRLRAYV +DEG VC +CNLRG C+RAY
Sbjct: 104 RFTLVRNLSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAY 163

Query: 181 VIMKETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIE 240
              ++ E ART+DV R+LL Y LD +  +  ++A   + VE S+RKLL E    S    E
Sbjct: 164 AQARDDEGARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDFE 223

Query: 241 AAAAVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEG 300
           +     A+T+T   +  P+  + D   +D   + GDW C++C FLNF++N RCL+C+   
Sbjct: 224 S-----AETETAGDELQPN--SQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFS 283

Query: 301 PKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPKKINNVDEIEMKKGDWICPQ 360
            +R+                                  +  K    D + +KKGDWIC  
Sbjct: 284 EERL----------------------------------KQLKEEQKDHLPLKKGDWICQT 339

Query: 361 CEFMNFASKKECLRCREHRPKRELSPGEWECPSCDIFNYRRNMMCRNCNCER 413
           C F+NF+    CLRC++    R+++PGEWEC SC+  N+RRN +C  C+ +R
Sbjct: 344 CNFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKR 339

[Close]

BLAST of CmoCh11G003220 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 223.0 bits (567), Expect = 4.6e-58
Identity = 118/292 (40.41%), Postives = 172/292 (58.90%), Query Frame = 0


Query: 61  HPWPEWISFVDGLKTKGYLIEPPSED----ANGDGSSSDAVTPSETD------YSDMNVL 120
           HPWPEW+  ++ L  + Y       D     N  G    +V   E +      + D   +
Sbjct: 147 HPWPEWMELMERLVKQNYFDHRRERDDDDMVNSLGIDVSSVGLGEDENVGVALFQDFRAV 206

Query: 121 KDACLSFARDRHDILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTC 180
           ++AC +F +DR DIL SLSR+DIQ ++  GCP   RKVV S K LR  VHLDEG+VCS+C
Sbjct: 207 QNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSSC 266

Query: 181 NLRGSCDRAYVIMKETEAARTVDVARILLAYALDPLVLSGGDKA-LGREHVEVSIRKLLS 240
           +LR SC++A+++  + + ART+D+ RIL  Y  DPL  +  +K+ L ++ V+  +RKLL 
Sbjct: 267 SLRNSCEKAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRKLLH 326

Query: 241 EISELSEEPIEAAAAVKADTKTPSR-KETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFS 300
           EI +LS  PI+         + P + K+ P          DVEMK+GDW+C KC+F+NF+
Sbjct: 327 EIVKLSAVPIDPNLTPPVIKRAPPKVKQPPPTPKRRVGRDDVEMKKGDWLCPKCDFMNFA 386

Query: 301 RNKRCLKCNEEGPKRVGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRP 341
           +N  CL+C+ + PKR      ++  G+W CPEC F+N+ RN+ C  C  KRP
Sbjct: 387 KNTICLQCDAKRPKR------QLLPGEWECPECNFLNYRRNMACFHCDCKRP 432

[Close]

BLAST of CmoCh11G003220 vs. TAIR 10
Match: AT5G17790.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-34
Identity = 93/278 (33.45%), Postives = 146/278 (52.52%), Query Frame = 0


Query: 64  PEWISFVDGLKTKGYLIEPPSEDANGDGSSSDAVTPSETDYSDMNVLKDACLSFARDRHD 123
           PEW   +  L   GY     S+  +  G  S+   P   D      L  ACL+ AR+R +
Sbjct: 93  PEWTELLQSLSKAGYF----SDSGSISGLESE-FFPGFPDELLRPAL--ACLALARERPE 152

Query: 124 ILESLSRDDIQTVMKDGCPNLFRKVVNSAKRLRAYVHLDEGEVCSTCNLRGSCDRAYVIM 183
           +LE LSR D++ ++++G P LF+   +S KR+  Y             LR        +M
Sbjct: 153 LLEMLSRRDVEVLVENGKPFLFKTGPDSLKRMSLY-------------LRSGLQGIGKLM 212

Query: 184 KETEAARTVDVARILLAYALDPLVLSGGDKALGREHVEVSIRKLLSEISELSEEPIEAAA 243
            + E A TVD+ R++L+Y +D +  S   K   +E +E S+R LLS+I+++S  P E+  
Sbjct: 213 -DMEKASTVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLRPPESNV 272

Query: 244 AVKADTKTPSRKETPSKLTNDALYKDVEMKRGDWMCSKCNFLNFSRNKRCLKCNEEGPKR 303
                 +   R     +    +   +VEMKRGDW+CS+C+ +NF+RN +C +C+E  PKR
Sbjct: 273 HDTMQNQYSDRDGQGVR----SFQNNVEMKRGDWICSRCSGMNFARNVKCFQCDEARPKR 332

Query: 304 VGADDIEMKSGDWICPECKFMNFSRNIQCLKCKSKRPK 342
                 ++   +W CP+C F N+ RN+ CL+C  KRP+
Sbjct: 333 ------QLTGSEWECPQCDFYNYGRNVACLRCDCKRPR 338

The following BLAST results are available for this feature:

BLAST of CmoCh11G003220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9K3	1.7e-33	33.45	Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 ...	[more]

BLAST of CmoCh11G003220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBY3	7.5e-258	100.00	zinc finger protein VAR3, chloroplastic-like isoform X1 OS=Cucurbita moschata OX...	[more]
A0A6J1EFG2	1.2e-250	98.38	zinc finger protein VAR3, chloroplastic-like isoform X2 OS=Cucurbita moschata OX...	[more]
A0A6J1EBZ3	1.3e-225	90.97	zinc finger protein VAR3, chloroplastic-like isoform X3 OS=Cucurbita moschata OX...	[more]
A0A6J1KWE3	1.5e-210	86.57	zinc finger protein VAR3, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1KZP8	1.6e-204	85.42	zinc finger protein VAR3, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3...	[more]

BLAST of CmoCh11G003220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925532.1	1.5e-257	100.00	zinc finger protein VAR3, chloroplastic-like isoform X1 [Cucurbita moschata]	[more]
KAG6587690.1	1.8e-250	98.15	Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022925533.1	2.4e-250	98.38	zinc finger protein VAR3, chloroplastic-like isoform X2 [Cucurbita moschata]	[more]
XP_023529383.1	1.6e-246	96.99	zinc finger protein VAR3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. p...	[more]
KAG7021655.1	2.8e-243	96.53	Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of CmoCh11G003220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48570.1	1.2e-106	45.26	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	2.5e-64	36.93	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G70650.2	2.5e-64	36.93	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G55040.1	4.6e-58	40.41	zinc finger (Ran-binding) family protein	[more]
AT5G17790.1	1.2e-34	33.45	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 217..237
None	No IPR available	GENE3D	4.10.1060.10		coord: 265..303 e-value: 6.3E-13 score: 49.8 coord: 383..417 e-value: 1.1E-6 score: 29.8 coord: 344..382 e-value: 1.2E-14 score: 55.2 coord: 304..342 e-value: 7.4E-15 score: 55.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..102
None	No IPR available	PANTHER	PTHR23111:SF40	ASPARAGINE-RICH PROTEIN	coord: 340..426
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 298..342 coord: 340..426
None	No IPR available	PANTHER	PTHR23111:SF40	ASPARAGINE-RICH PROTEIN	coord: 298..342
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 53..303
None	No IPR available	PANTHER	PTHR23111:SF40	ASPARAGINE-RICH PROTEIN	coord: 53..303
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 314..338 e-value: 6.7E-6 score: 35.6 coord: 275..299 e-value: 1.4E-5 score: 34.6 coord: 354..378 e-value: 4.7E-5 score: 32.8 coord: 387..413 e-value: 4.2 score: 7.0
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 352..379 e-value: 1.9E-8 score: 33.4 coord: 312..340 e-value: 1.9E-8 score: 33.5 coord: 274..296 e-value: 0.0011 score: 18.3
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 356..375
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 316..335
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 277..296
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 389..408
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 352..381 score: 10.217952
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 385..414 score: 9.495252
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 312..341 score: 10.217952
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 273..302 score: 9.675926
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 305..342
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 269..300
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 349..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G003220.1	CmoCh11G003220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding