CmoCh11G001060 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G001060
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	cyclic nucleotide-gated channel 18
Location	Cmo_Chr11: 553085 .. 554023 (-)
RNA-Seq Expression	CmoCh11G001060
Synteny	CmoCh11G001060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAACGGAAGAAAAGAACAACAAACGCTCTGCAAAATTTTGGCTCACCGTATTCCTCTGTTCATCTTCCAAAAGGTCTTCAGTTCTCTCTCTCCGATCATATTTTTCGTCTTTGCAATGGAAAAATGCATAACATTGCTCATTCTCGATTGGGCGGTCTTCACAAATCCGTTGTAGGATCATATCCTCGAACCAGATTCCGATTTCGTCGTCCGATGGCATCGCATCTTCCTCGTTACTTGTTTGATCGCGCTCTTCGTCGATCCTCTTTTTCTTTTATTTCTCGATCATTGGCGGCCCTGCTTGAAGGCGATTCAACACTGGATTTGGCATCGTCGTCACGAAACCATCGTCGATTTGTTCTCCATGTTTCAAATGCTTATGAAGTTCCGCACCGCCTTCGTTGCGCCCAATTCTAGGGTTTTTGGCCGCGAGGAGCTTGCTATGGACCCTAGGGATATTGCTATGCGCTATCTCAAGAAGGATTTTGTTATCGATCTTGCCGCCATGCTTCCCCTGCCTCAGGTGAATCGATTCTTCTTTAACTGATCGAATTAGGGATTTGATTTAGGGTTTAGCAAAATTTAATGTTGCTCGGTTGTTGTCCGAGATCCGGTTTGGATCTCCATTTGTTTGGGGAAATGGAACTCTTGATTTTAATCAATTTAATCCAAAGTAAATTCTCTTGATTTTGATTTTGTCCTTTGCAGTTCTACTATTGCCTAATTCTTTGAGATTTGTCGGTGCACCCTATAGGAGCTGCTTGGTATGTGGCATCCATTCAGCCAGCATGAATGTGTTGGCAGATAGAATGTAGAAAGGAGATGAATACCACACATTCTCATTTTTTTCAATATTAGTGAAGCTATTTTCTTCGATCTATATTGACATATACGAACACATATTTCACAAACTATCAAATTCAAAATAGATTCGAC

mRNA sequence

TAATAACGGAAGAAAAGAACAACAAACGCTCTGCAAAATTTTGGCTCACCGTATTCCTCTGTTCATCTTCCAAAAGGTCTTCAGTTCTCTCTCTCCGATCATATTTTTCGTCTTTGCAATGGAAAAATGCATAACATTGCTCATTCTCGATTGGGCGGTCTTCACAAATCCGTTGTAGGATCATATCCTCGAACCAGATTCCGATTTCGTCGTCCGATGGCATCGCATCTTCCTCGTTACTTGTTTGATCGCGCTCTTCGTCGATCCTCTTTTTCTTTTATTTCTCGATCATTGGCGGCCCTGCTTGAAGGCGATTCAACACTGGATTTGGCATCGTCGTCACGAAACCATCGTCGATTTGTTCTCCATGTTTCAAATGCTTATGAAGTTCCGCACCGCCTTCGTTGCGCCCAATTCTAGGGTTTTTGGCCGCGAGGAGCTTGCTATGGACCCTAGGGATATTGCTATGCGCTATCTCAAGAAGGATTTTGTTATCGATCTTGCCGCCATGCTTCCCCTGCCTCAGGGTTTAGCAAAATTTAATGTTGCTCGGTTGTTGTCCGAGATCCGTTCTACTATTGCCTAATTCTTTGAGATTTGTCGGTGCACCCTATAGGAGCTGCTTGGTATGTGGCATCCATTCAGCCAGCATGAATGTGTTGGCAGATAGAATGTAGAAAGGAGATGAATACCACACATTCTCATTTTTTTCAATATTAGTGAAGCTATTTTCTTCGATCTATATTGACATATACGAACACATATTTCACAAACTATCAAATTCAAAATAGATTCGAC

Coding sequence (CDS)

ATGTTTCAAATGCTTATGAAGTTCCGCACCGCCTTCGTTGCGCCCAATTCTAGGGTTTTTGGCCGCGAGGAGCTTGCTATGGACCCTAGGGATATTGCTATGCGCTATCTCAAGAAGGATTTTGTTATCGATCTTGCCGCCATGCTTCCCCTGCCTCAGGGTTTAGCAAAATTTAATGTTGCTCGGTTGTTGTCCGAGATCCGTTCTACTATTGCCTAA

Protein sequence

MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQGLAKFNVARLLSEIRSTIA

Homology

[Close]

BLAST of CmoCh11G001060 vs. ExPASy Swiss-Prot
Match: Q9LEQ3 (Cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana OX=3702 GN=CNGC18 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.6e-15
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +  + MKFRTAFVA +SRVFGR EL MD R+IAMRYLK DF+ID+AAMLPLPQ
Sbjct: 103 LLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKTDFLIDVAAMLPLPQ 155

[Close]

BLAST of CmoCh11G001060 vs. ExPASy Swiss-Prot
Match: Q9SU64 (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana OX=3702 GN=CNGC16 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-13
Identity = 36/53 (67.92%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +  +L+KF+TAFV+ +SRVFGR EL MD R+IA+RYLK +FVIDLAA LPLPQ
Sbjct: 108 LIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQ 160

[Close]

BLAST of CmoCh11G001060 vs. ExPASy Swiss-Prot
Match: Q8L7Z0 (Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana OX=3702 GN=CNGC17 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.8e-12
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNS--RVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +  + +KFRT F+APNS  RVFGR EL MDP+ IA RY+K DF+IDL A LPLPQ
Sbjct: 137 LLHIFIKFRTGFIAPNSSTRVFGRGELVMDPKAIAWRYIKSDFIIDLIATLPLPQ 191

[Close]

BLAST of CmoCh11G001060 vs. ExPASy Swiss-Prot
Match: Q9M0A4 (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 GN=CNGC9 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.8e-12
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +F M ++FRTAFVAP+SRVFGR EL +DP  IA RYL++ F+ID  ++LPLPQ
Sbjct: 167 LFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQ 219

[Close]

BLAST of CmoCh11G001060 vs. ExPASy Swiss-Prot
Match: O82226 (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana OX=3702 GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-12
Identity = 32/53 (60.38%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +F M ++FRTA+VAP+SRVFGR EL +DP  IA RYL++ F+IDL ++LP+PQ
Sbjct: 167 LFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDLLSVLPVPQ 219

[Close]

BLAST of CmoCh11G001060 vs. ExPASy TrEMBL
Match: A0A6J1JGZ0 (probable cyclic nucleotide-gated ion channel 16 OS=Cucurbita maxima OX=3661 GN=LOC111485616 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.1e-15
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           MF MLMKFRTAFVAPNSRVFGR +L  DP  IAMRYLKKDFVIDLAA LPLPQ
Sbjct: 91  MFHMLMKFRTAFVAPNSRVFGRGDLVKDPTAIAMRYLKKDFVIDLAATLPLPQ 143

[Close]

BLAST of CmoCh11G001060 vs. ExPASy TrEMBL
Match: A0A6J1HJ85 (probable cyclic nucleotide-gated ion channel 16 OS=Cucurbita moschata OX=3662 GN=LOC111464975 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.1e-15
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           MF MLMKFRTAFVAPNSRVFGR +L  DP  IAMRYLKKDFVIDLAA LPLPQ
Sbjct: 91  MFHMLMKFRTAFVAPNSRVFGRGDLVKDPTAIAMRYLKKDFVIDLAATLPLPQ 143

[Close]

BLAST of CmoCh11G001060 vs. ExPASy TrEMBL
Match: A0A6A2XBJ9 (Putative cyclic nucleotide-gated ion channel 18 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117017pilonHSYRG00012 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.3e-15
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +  MLMKFRT F+APNSR+FG+ EL MDPR+IA+RYLKKDFVIDLAA LPLPQ
Sbjct: 101 LINMLMKFRTGFIAPNSRIFGKGELVMDPREIALRYLKKDFVIDLAAALPLPQ 153

[Close]

BLAST of CmoCh11G001060 vs. ExPASy TrEMBL
Match: A0A6J1BIB9 (cyclic nucleotide-gated ion channel 18-like OS=Herrania umbratica OX=108875 GN=LOC110427769 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.9e-15
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +  MLMKFRTAFVAPNSRVFGR EL MD R+IAMRYLK DFVIDLAA LPLPQ
Sbjct: 101 LLNMLMKFRTAFVAPNSRVFGRGELVMDAREIAMRYLKSDFVIDLAATLPLPQ 153

[Close]

BLAST of CmoCh11G001060 vs. ExPASy TrEMBL
Match: A0A061ECH6 (Cyclic nucleotide-gated channel 18 OS=Theobroma cacao OX=3641 GN=TCM_016857 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-14
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 4   MLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           MLMKFRTAFVAPNSRVFGR EL MD R+IAMRYLK DFVIDLAA LPLPQ
Sbjct: 104 MLMKFRTAFVAPNSRVFGRGELVMDAREIAMRYLKSDFVIDLAAALPLPQ 153

[Close]

BLAST of CmoCh11G001060 vs. NCBI nr
Match: KAG6587479.1 (Cyclic nucleotide-gated ion channel 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0


Query: 4  MLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQGL 56
          MLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ L
Sbjct: 1  MLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQEL 52

[Close]

BLAST of CmoCh11G001060 vs. NCBI nr
Match: KAG6589454.1 (putative cyclic nucleotide-gated ion channel 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-15
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           MF MLMKFRTAFVAPNSRVFGR +L  DP  IAMRYLKKDFVIDLAA LPLPQ
Sbjct: 91  MFHMLMKFRTAFVAPNSRVFGRGDLVKDPTAIAMRYLKKDFVIDLAATLPLPQ 143

[Close]

BLAST of CmoCh11G001060 vs. NCBI nr
Match: XP_022965027.1 (probable cyclic nucleotide-gated ion channel 16 [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-15
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           MF MLMKFRTAFVAPNSRVFGR +L  DP  IAMRYLKKDFVIDLAA LPLPQ
Sbjct: 91  MFHMLMKFRTAFVAPNSRVFGRGDLVKDPTAIAMRYLKKDFVIDLAATLPLPQ 143

[Close]

BLAST of CmoCh11G001060 vs. NCBI nr
Match: XP_023515994.1 (probable cyclic nucleotide-gated ion channel 16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515995.1 probable cyclic nucleotide-gated ion channel 16 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-15
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           MF MLMKFRTAFVAPNSRVFGR +L  DP  IAMRYLKKDFVIDLAA LPLPQ
Sbjct: 91  MFHMLMKFRTAFVAPNSRVFGRGDLVKDPTAIAMRYLKKDFVIDLAATLPLPQ 143

[Close]

BLAST of CmoCh11G001060 vs. NCBI nr
Match: KAG7023138.1 (putative cyclic nucleotide-gated ion channel 16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-15
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           MF MLMKFRTAFVAPNSRVFGR +L  DP  IAMRYLKKDFVIDLAA LPLPQ
Sbjct: 91  MFHMLMKFRTAFVAPNSRVFGRGDLVKDPTAIAMRYLKKDFVIDLAATLPLPQ 143

[Close]

BLAST of CmoCh11G001060 vs. TAIR 10
Match: AT5G14870.1 (cyclic nucleotide-gated channel 18 )

HSP 1 Score: 80.5 bits (197), Expect = 6.1e-16
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +  + MKFRTAFVA +SRVFGR EL MD R+IAMRYLK DF+ID+AAMLPLPQ
Sbjct: 103 LLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKTDFLIDVAAMLPLPQ 155

[Close]

BLAST of CmoCh11G001060 vs. TAIR 10
Match: AT3G48010.1 (cyclic nucleotide-gated channel 16 )

HSP 1 Score: 75.9 bits (185), Expect = 1.5e-14
Identity = 36/53 (67.92%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +  +L+KF+TAFV+ +SRVFGR EL MD R+IA+RYLK +FVIDLAA LPLPQ
Sbjct: 108 LIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQ 160

[Close]

BLAST of CmoCh11G001060 vs. TAIR 10
Match: AT4G30560.1 (cyclic nucleotide gated channel 9 )

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-13
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +F M ++FRTAFVAP+SRVFGR EL +DP  IA RYL++ F+ID  ++LPLPQ
Sbjct: 167 LFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQ 219

[Close]

BLAST of CmoCh11G001060 vs. TAIR 10
Match: AT4G30360.1 (cyclic nucleotide-gated channel 17 )

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-13
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNS--RVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +  + +KFRT F+APNS  RVFGR EL MDP+ IA RY+K DF+IDL A LPLPQ
Sbjct: 137 LLHIFIKFRTGFIAPNSSTRVFGRGELVMDPKAIAWRYIKSDFIIDLIATLPLPQ 191

[Close]

BLAST of CmoCh11G001060 vs. TAIR 10
Match: AT4G30560.2 (cyclic nucleotide gated channel 9 )

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-13
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1   MFQMLMKFRTAFVAPNSRVFGREELAMDPRDIAMRYLKKDFVIDLAAMLPLPQ 54
           +F M ++FRTAFVAP+SRVFGR EL +DP  IA RYL++ F+ID  ++LPLPQ
Sbjct: 141 LFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQ 193

The following BLAST results are available for this feature:

BLAST of CmoCh11G001060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEQ3	8.6e-15	73.58	Cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana OX=3702 GN=CNGC18...	[more]
Q9SU64	2.1e-13	67.92	Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8L7Z0	1.8e-12	63.64	Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana OX=3702 GN=CNGC17...	[more]
Q9M0A4	1.8e-12	62.26	Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 G...	[more]
O82226	3.1e-12	60.38	Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CmoCh11G001060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JGZ0	3.1e-15	84.91	probable cyclic nucleotide-gated ion channel 16 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HJ85	3.1e-15	84.91	probable cyclic nucleotide-gated ion channel 16 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6A2XBJ9	5.3e-15	77.36	Putative cyclic nucleotide-gated ion channel 18 OS=Hibiscus syriacus OX=106335 G...	[more]
A0A6J1BIB9	6.9e-15	83.02	cyclic nucleotide-gated ion channel 18-like OS=Herrania umbratica OX=108875 GN=L...	[more]
A0A061ECH6	1.2e-14	88.00	Cyclic nucleotide-gated channel 18 OS=Theobroma cacao OX=3641 GN=TCM_016857 PE=4...	[more]

BLAST of CmoCh11G001060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587479.1	1.6e-18	98.08	Cyclic nucleotide-gated ion channel 18, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG6589454.1	6.4e-15	84.91	putative cyclic nucleotide-gated ion channel 16, partial [Cucurbita argyrosperma...	[more]
XP_022965027.1	6.4e-15	84.91	probable cyclic nucleotide-gated ion channel 16 [Cucurbita moschata]	[more]
XP_023515994.1	6.4e-15	84.91	probable cyclic nucleotide-gated ion channel 16 isoform X1 [Cucurbita pepo subsp...	[more]
KAG7023138.1	6.4e-15	84.91	putative cyclic nucleotide-gated ion channel 16, partial [Cucurbita argyrosperma...	[more]

BLAST of CmoCh11G001060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14870.1	6.1e-16	73.58	cyclic nucleotide-gated channel 18	[more]
AT3G48010.1	1.5e-14	67.92	cyclic nucleotide-gated channel 16	[more]
AT4G30560.1	1.3e-13	62.26	cyclic nucleotide gated channel 9	[more]
AT4G30360.1	1.3e-13	63.64	cyclic nucleotide-gated channel 17	[more]
AT4G30560.2	1.3e-13	62.26	cyclic nucleotide gated channel 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45651:SF39	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18	coord: 1..58
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 1..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G001060.1	CmoCh11G001060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070588	calcium ion transmembrane transport
biological_process	GO:0006874	cellular calcium ion homeostasis
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0071805	potassium ion transmembrane transport
cellular_component	GO:0016324	apical plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005262	calcium channel activity
molecular_function	GO:0005249	voltage-gated potassium channel activity