
CmoCh11G000820 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGTCCATCCTTTTGGATTTATTTCTCTCTGCTAGTTTCCCTCGCTATTGTCATAGTGGTCTCGCGCGTTGCAGTTCTCTGGTGAGAAGCGCAATTTGCTATAATGGCATCGCACGGTCATCTTGAGGAGGTAAGTTCCTCCGTTTTATTTTCACCGCTCGATTTTCTTTTCACGCGAGTTTTAGGTGTTTGTTCCATGGAGTTTCTCTCTGATGTCTTAATTCTTTCAGGATGATGATTTTGGAGGCGACTTCACTGGAACGCACAACAATAGGCATTCAGGTTGATTTCGCATTCTTTGCATCAAATCGCTGGTGTGTGATTGGCATTTGTTCACTGATGTTTATTTTGTGCTATGTTCATGAAAATTTAGGAAATAAGAGAGGTTTTGGCGATCTCGAAGATGAAGAGGATGACTTATTTGGTTCCAAAAAGGTATACGACCTGATTCTCGAGTTTTTTATTTGAACTTAAGTTACTACTTCGATTTTTACTTATTTTGTTGTTCATTATGATGTTAACTTGCGGCTTAATCTAATTGCTTCAATGTAGGCTAACGCTAAAGTCGAAGAAACTGCTCCAGGTGTAGCGACAGGAATGATTCTGTCACTTCGTGAGAGGTATTGAATCATTTTCGGTGATTGGTAAATGTTACGGAATATCTATATCGTGCACTGTTCAAAGGAAGCGATCCTTCAAGTTCCTTGTATATTTATATATTCTGAAACCTCGTGTGCAGTCTTAAAAGCTATGAGGATACACTCACAACATGCCGGGTATGGTTTTAGTTATTTCATCATATCTCCATGTCTTCATTCTTCATTGCCTGTCTATTCGTAGCGTTTGTTCAGTTCTCGGCTTAGTTTTGCTTGGAGATCCATCTGTCCGATGAATCTTTGTATTAGATGCCTTCTTTCTAACATTAGAAATTCTGTTATTATGTCTTTTGGTTCCTGATATACGGCACCTTGTGAATCTAATATTTAGCTATTTCGTGTTTCAAAACTTAACGAAAAACATAACCTAACATGGTTTAATAGTTTATGATTATGTAGAGAGATCTAATCTACATTAATTCTATAGAATCAGAATAACAACCAAAATCCTACTTGAATCTAATGTCATAATCAACTAGAGTTGTAAACTTGATATGTAAGAGGCTTGCAATCCATTAACATATTATTCGAGCTGAAAAAAACGTGTTTATTTAGTAATCTATTAATCCTCAGTCGAGGCTCTGGAGTTAAAGCTGGTATCATTGTCTAGTTTCACATTTTTTTGAAATCGCTATGATCTGTTGTCTACTACCATATTCTACCTTTGAGTTTGGTTAGCTACTTCTTTTTACTGAAGCATTATGCAAGGATGCTCATATGCGATGCTTAATTACTTGTTGGATTTACCTTGGTTTCAGACAGAGCTTGAAATTGCCAAGTCTGAGATTCAGAAGTGGATTTCTTCATTTCAGAATGAGAATTTCATTCCTGCTGGTGCTTCCCCTGGTTTGTTGAACTCTGAGATATGCTCGTTTTTGTTCATCCTCTATGACCTGCTCATTCTTAAAACAATTGATCTTTCGATGCAGAACCTAAGTTTGTGATCAGCTTTCTGCAATCCCTGAAGTTCTCGGAGGAGTCTCTAAGAGACCAGGTTTTCCGATTTTTTTTTTTAATGTTTGGTTTTGTAGATTCAATCAGGAATCTGATATTTTTTCATGCAAAATGTAAAATGTGTTTCATCTTTCAGCTAGAAAAGGCAAAGAAGAAGGAAGCCGCTTTTATCGTTACATTTGCAAAACGAGAGCAGGAGATTGCAGAGTTGAAGGCAAGTTCTGCATCTTTTTCCTTTTAGACTCGAGGCAGAAAATTTTATTTGTTTCCACTTTGAAATACGTGAAGATTTTGGTTGATGAAAATGGAATATCTCTCATCTGTCGTGCATGATTTTCAGCACTTATTAACGTATAGGACTTAATCAACCTTGGTGGTATAGGGTTGTTAATAAAATTTGAACTTTGGAACCTTAGTTTTGTGTGAAAGTTTTGCGCGAAGTAAAAGGCAGTTGAACATGATACCTTGAAGCTTCCTAATCCATATTCAAGACATGACGCTAGGTTTAGTAAAAAACAGAACTGCTAAGTCTGTAATTGCTAATATGGCTTCGTCCGAGATGCTTACAATTCTGATATGCTTTTTGTGATGTATGAAATGGAGATGTTTTCACCTTTATTACTCTACTGCTTGCATTTTGTTTCACAATTCCTTTTGGATTGATTTATGAAACTCTTCATTTGCTGTTACAATTTTAATTACTCTGAGTACTTCCAAGATCAGGCATCTATAATATTGTTAAAATATCCAGGCTGCAGTCCGGGACTTGAAAGCACAATTGAAGCCACCATCCATGCAGGTACTAATGACGCTTTAATTTCGGTTTGGTAGAAGTGCATAGTACTAAGATTGGATATTGTGAACAACGTAGCACAACTTTTTGACTTTTCATGTACTTTTATAAACATTTCTAATCTGTTTTTTCCTTTCAGTTTTTCCTTATATAAATAATGTTCGAAGCAAGATATTGATCTGCTTATATATGCTAGAGTTGATTGATGAGAATATGATATATGGTTGTTCTTGTTGTTTTATATATATTGTTGTTAAGCTATGAAACCGTGAATTTATATCTGAAAGGTCTTAGAAATCTCTGAAATGTGAGGAGAAAGGTGACTAACCATTTTGACAATCCCAAGGTGACCCTAGTTTGAAGGTCTTCGTATGTTTAGATATTCTTTCCGAGGTCCTAAATTCAATCCTCTGGGCGTAAATCCCTATTATTGAAAATCTTTGTCATCTGCTGACCTTGGGTCAAGGCCTCTCTGAAAATTTGAGGTGGAGGTGGGCCAATTGTTATCTATTTTCGTTTCATTTAGGATAAATTGCAAATGTGCTAGTTGTGATGTGTAATGTCAGTTGTAGAAAACTTCTACTTCAGTACTTCATTGTGTTTGTATGTAGACCTTTTGTCTTCTCGTTTGGAAATCACTTATGTCTCCAGGTTTAACTTACTTGCTTACAACTAACTTTAACAGGCTAGAAGATTATTGATAGATCCTGCAATACATGAAGAGTTTACTCGTCTGAAGGTCTGTTTTACATGAACTACCAATCTTGATATGTATGGTTGATACCTCGCTTTGTACTCATCTTTTCATTCAAGCTAGATATTTTAAAAGCTTAATTAGAATGGGAATTTGACCAGATCTTAGCATTTGTCATTTATCCATCTTTTCTTCATGTTCTGTTCATGGTTAAACTTAATGGAGGGTGGATGCTAAAAGATCCTAGGCGGTACCACAAACTTTTTGAGAGGGGGTTACTATGTGAGTGAATTACAAGGGAGAGTCGGGGGGGTTTGTCAGAACTGTTTTGAAAAGTAGTTTTTGACCAATTGGAAAAAAGTGAAACAGTAAAGCCAAAGTTGCTAGGAGCCATCTTTGTGAGTGAAATATTATATTTGAATTCTATGATAACAGCATAAACTCGTAATCATAATTAGTGAATTGAGTATTAATTATTTGACTTTGTCATGACATGCAGAGTTTGGTTGAGGAGAAAGACAAAAAGGTTAAGGAGCTGCAAGATAACATTGCCGCAGTAAGTTTTACTCCATCAAGCAAGATGGGTAAAATGCTGATGGCTAAATGTAGGACTCTGCAAGAGGAAAATGAAGAGATAGGAAATCAAGCTGCTGAAGGGAAGGTATAGTCCCTAATTTACGTCGTGTTGTGGACTTACTCTATGTTCATTCACCTCTTTTATGGAGTTTTTTCAAATGGAGCTTTTTTTAGGAGGGTGAGTTTTGAAAGATAAATTGTGCCCCCGGTATCATGTGATAATTTTACTTCATTTGTTTGTGCAATCATTCGCCTCGCCCTCGACTGCAGATGCATGAGTTAGGAATAAAGCTCGCGTTGCAGAAATCTCAAAATACGGAACTTAGAAATCAGTACGAAGGTCAGTATCTATCATTAAATACTCATTTTTGTTGCACGACTTTCTGAAGTTCAGATCTGGAACAGTTTGCATGCTTCAAGTTATTGCGATTTTTTCATGAATAATTAATAAGCACTTTAATTTTCGTTTAGAGTCACTTTCTTTTCATAATCCGACTTTAAAGTAACTATTTTAAAATTATCATAAATCAAGCTGGTTGAACGATGTTTAATTTGTTATCAAGCACAAGATTTTTAAAAGAACACTAAAAATGACTTTTGACTGCTAAACTAATGTTAACACCACAAATCTATGCAGCCTTACAGAAACATATGGAGGGGCTGACAAATGACGTTGAAAGGTCAAACGAATTGGTACGCTCATCATCCGTGTTATATTTTTTGGTCACTTTCTGAATCAATTTCTATATTTATCAGTTTCTTTTTCGTATTCAATGAATTAGGCTATCGTGTTGCAAGAGAAGCTTGCAGAGAAGGATCGGGAGCTTCAAAGCTTCAAGGAAGCTTTACAGCAGCCGAAGAGTCCAACGGTCGAGAATAAAGTTGATTCACCCCTTGCCGAGAAGCCACCCACAGATGAGGTGGTTATTTCCGGCGATGCTGAAAGCTGAGATCAAATAGATTTTCTAAATTTTGTACCTGTATATTACGTTTAATTTCCCACATTCTAACATTTCGTTTCTAGCCTATGAATATCGTTACATTCCATAAGAGAAATATGAAAGATACTGCATATTCTAATTTAAACCTTCGTTTTTTT TCGTCCATCCTTTTGGATTTATTTCTCTCTGCTAGTTTCCCTCGCTATTGTCATAGTGGTCTCGCGCGTTGCAGTTCTCTGGTGAGAAGCGCAATTTGCTATAATGGCATCGCACGGTCATCTTGAGGAGGATGATGATTTTGGAGGCGACTTCACTGGAACGCACAACAATAGGCATTCAGGAAATAAGAGAGGTTTTGGCGATCTCGAAGATGAAGAGGATGACTTATTTGGTTCCAAAAAGGCTAACGCTAAAGTCGAAGAAACTGCTCCAGGTGTAGCGACAGGAATGATTCTGTCACTTCGTGAGAGTCTTAAAAGCTATGAGGATACACTCACAACATGCCGGACAGAGCTTGAAATTGCCAAGTCTGAGATTCAGAAGTGGATTTCTTCATTTCAGAATGAGAATTTCATTCCTGCTGGTGCTTCCCCTGAACCTAAGTTTGTGATCAGCTTTCTGCAATCCCTGAAGTTCTCGGAGGAGTCTCTAAGAGACCAGCTAGAAAAGGCAAAGAAGAAGGAAGCCGCTTTTATCGTTACATTTGCAAAACGAGAGCAGGAGATTGCAGAGTTGAAGGCTGCAGTCCGGGACTTGAAAGCACAATTGAAGCCACCATCCATGCAGGCTAGAAGATTATTGATAGATCCTGCAATACATGAAGAGTTTACTCGTCTGAAGAGTTTGGTTGAGGAGAAAGACAAAAAGGTTAAGGAGCTGCAAGATAACATTGCCGCAGTAAGTTTTACTCCATCAAGCAAGATGGGTAAAATGCTGATGGCTAAATGTAGGACTCTGCAAGAGGAAAATGAAGAGATAGGAAATCAAGCTGCTGAAGGGAAGATGCATGAGTTAGGAATAAAGCTCGCGTTGCAGAAATCTCAAAATACGGAACTTAGAAATCAGTACGAAGCCTTACAGAAACATATGGAGGGGCTGACAAATGACGTTGAAAGGTCAAACGAATTGGCTATCGTGTTGCAAGAGAAGCTTGCAGAGAAGGATCGGGAGCTTCAAAGCTTCAAGGAAGCTTTACAGCAGCCGAAGAGTCCAACGGTCGAGAATAAAGTTGATTCACCCCTTGCCGAGAAGCCACCCACAGATGAGGTGGTTATTTCCGGCGATGCTGAAAGCTGAGATCAAATAGATTTTCTAAATTTTGTACCTGTATATTACGTTTAATTTCCCACATTCTAACATTTCGTTTCTAGCCTATGAATATCGTTACATTCCATAAGAGAAATATGAAAGATACTGCATATTCTAATTTAAACCTTCGTTTTTTT ATGGCATCGCACGGTCATCTTGAGGAGGATGATGATTTTGGAGGCGACTTCACTGGAACGCACAACAATAGGCATTCAGGAAATAAGAGAGGTTTTGGCGATCTCGAAGATGAAGAGGATGACTTATTTGGTTCCAAAAAGGCTAACGCTAAAGTCGAAGAAACTGCTCCAGGTGTAGCGACAGGAATGATTCTGTCACTTCGTGAGAGTCTTAAAAGCTATGAGGATACACTCACAACATGCCGGACAGAGCTTGAAATTGCCAAGTCTGAGATTCAGAAGTGGATTTCTTCATTTCAGAATGAGAATTTCATTCCTGCTGGTGCTTCCCCTGAACCTAAGTTTGTGATCAGCTTTCTGCAATCCCTGAAGTTCTCGGAGGAGTCTCTAAGAGACCAGCTAGAAAAGGCAAAGAAGAAGGAAGCCGCTTTTATCGTTACATTTGCAAAACGAGAGCAGGAGATTGCAGAGTTGAAGGCTGCAGTCCGGGACTTGAAAGCACAATTGAAGCCACCATCCATGCAGGCTAGAAGATTATTGATAGATCCTGCAATACATGAAGAGTTTACTCGTCTGAAGAGTTTGGTTGAGGAGAAAGACAAAAAGGTTAAGGAGCTGCAAGATAACATTGCCGCAGTAAGTTTTACTCCATCAAGCAAGATGGGTAAAATGCTGATGGCTAAATGTAGGACTCTGCAAGAGGAAAATGAAGAGATAGGAAATCAAGCTGCTGAAGGGAAGATGCATGAGTTAGGAATAAAGCTCGCGTTGCAGAAATCTCAAAATACGGAACTTAGAAATCAGTACGAAGCCTTACAGAAACATATGGAGGGGCTGACAAATGACGTTGAAAGGTCAAACGAATTGGCTATCGTGTTGCAAGAGAAGCTTGCAGAGAAGGATCGGGAGCTTCAAAGCTTCAAGGAAGCTTTACAGCAGCCGAAGAGTCCAACGGTCGAGAATAAAGTTGATTCACCCCTTGCCGAGAAGCCACCCACAGATGAGGTGGTTATTTCCGGCGATGCTGAAAGCTGA MASHGHLEEDDDFGGDFTGTHNNRHSGNKRGFGDLEDEEDDLFGSKKANAKVEETAPGVATGMILSLRESLKSYEDTLTTCRTELEIAKSEIQKWISSFQNENFIPAGASPEPKFVISFLQSLKFSEESLRDQLEKAKKKEAAFIVTFAKREQEIAELKAAVRDLKAQLKPPSMQARRLLIDPAIHEEFTRLKSLVEEKDKKVKELQDNIAAVSFTPSSKMGKMLMAKCRTLQEENEEIGNQAAEGKMHELGIKLALQKSQNTELRNQYEALQKHMEGLTNDVERSNELAIVLQEKLAEKDRELQSFKEALQQPKSPTVENKVDSPLAEKPPTDEVVISGDAES Homology
BLAST of CmoCh11G000820 vs. ExPASy Swiss-Prot
Match: Q9ZSZ8 (FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana OX=3702 GN=FIP37 PE=1 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 9.5e-112 Identity = 214/304 (70.39%), Postives = 259/304 (85.20%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy Swiss-Prot
Match: Q6P4K5 (Pre-mRNA-splicing regulator WTAP OS=Xenopus tropicalis OX=8364 GN=wtap PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.2e-25 Identity = 74/241 (30.71%), Postives = 139/241 (57.68%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy Swiss-Prot
Match: Q9ER69 (Pre-mRNA-splicing regulator WTAP OS=Mus musculus OX=10090 GN=Wtap PE=1 SV=3) HSP 1 Score: 115.5 bits (288), Expect = 1.2e-24 Identity = 67/203 (33.00%), Postives = 120/203 (59.11%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy Swiss-Prot
Match: Q4KLT6 (Pre-mRNA-splicing regulator WTAP OS=Xenopus laevis OX=8355 GN=wtap PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-24 Identity = 74/241 (30.71%), Postives = 139/241 (57.68%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy Swiss-Prot
Match: Q15007 (Pre-mRNA-splicing regulator WTAP OS=Homo sapiens OX=9606 GN=WTAP PE=1 SV=2) HSP 1 Score: 114.8 bits (286), Expect = 2.0e-24 Identity = 68/208 (32.69%), Postives = 122/208 (58.65%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy TrEMBL
Match: A0A6J1F1G7 (FKBP12-interacting protein of 37 kDa-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441245 PE=3 SV=1) HSP 1 Score: 646.0 bits (1665), Expect = 9.1e-182 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy TrEMBL
Match: A0A6J1HW30 (FKBP12-interacting protein of 37 kDa-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468054 PE=3 SV=1) HSP 1 Score: 633.6 bits (1633), Expect = 4.7e-178 Identity = 338/344 (98.26%), Postives = 340/344 (98.84%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy TrEMBL
Match: A0A6J1F6G7 (FKBP12-interacting protein of 37 kDa-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441245 PE=3 SV=1) HSP 1 Score: 632.1 bits (1629), Expect = 1.4e-177 Identity = 340/344 (98.84%), Postives = 340/344 (98.84%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy TrEMBL
Match: A0A6J1HZD7 (FKBP12-interacting protein of 37 kDa-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468054 PE=3 SV=1) HSP 1 Score: 619.8 bits (1597), Expect = 7.0e-174 Identity = 334/344 (97.09%), Postives = 336/344 (97.67%), Query Frame = 0
BLAST of CmoCh11G000820 vs. ExPASy TrEMBL
Match: A0A6J1C1L0 (FKBP12-interacting protein of 37 kDa OS=Momordica charantia OX=3673 GN=LOC111007142 PE=3 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 8.0e-162 Identity = 309/344 (89.83%), Postives = 329/344 (95.64%), Query Frame = 0
BLAST of CmoCh11G000820 vs. NCBI nr
Match: XP_022934012.1 (FKBP12-interacting protein of 37 kDa-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 646.0 bits (1665), Expect = 1.9e-181 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of CmoCh11G000820 vs. NCBI nr
Match: KAG6587455.1 (FKBP12-interacting protein of 37 kDa, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180 Identity = 342/344 (99.42%), Postives = 343/344 (99.71%), Query Frame = 0
BLAST of CmoCh11G000820 vs. NCBI nr
Match: XP_023530755.1 (FKBP12-interacting protein of 37 kDa-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 634.0 bits (1634), Expect = 7.4e-178 Identity = 338/344 (98.26%), Postives = 341/344 (99.13%), Query Frame = 0
BLAST of CmoCh11G000820 vs. NCBI nr
Match: XP_022968876.1 (FKBP12-interacting protein of 37 kDa-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 633.6 bits (1633), Expect = 9.6e-178 Identity = 338/344 (98.26%), Postives = 340/344 (98.84%), Query Frame = 0
BLAST of CmoCh11G000820 vs. NCBI nr
Match: XP_022934013.1 (FKBP12-interacting protein of 37 kDa-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 632.1 bits (1629), Expect = 2.8e-177 Identity = 340/344 (98.84%), Postives = 340/344 (98.84%), Query Frame = 0
BLAST of CmoCh11G000820 vs. TAIR 10
Match: AT3G54170.1 (FKBP12 interacting protein 37 ) HSP 1 Score: 404.8 bits (1039), Expect = 6.8e-113 Identity = 214/304 (70.39%), Postives = 259/304 (85.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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