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CmoCh10G011770 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAGAGAGGTCTCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGTAATCGGTTCTACGCCAATAAGCCGGAGCTTGCCGCCCGTCGCATCGAAGCAATCGGCTATCAGGTTGGCCATCAGCTCTCCGAACGGTATTTCTCCACCGCACTTTTTACCCTTCTTTTTGTATCTGTGAATTGTCTCGGGATCGGGATTCTTTGTTGCTTAGATTTTGATTTCTAG ATGGGGAGAGAGGTCTCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGTAATCGGTTCTACGCCAATAAGCCGGAGCTTGCCGCCCGTCGCATCGAAGCAATCGGCTATCAGGTTGGCCATCAGCTCTCCGAACGGTATTTCTCCACCGCACTTTTTACCCTTCTTTTTGTATCTGTGAATTGTCTCGGGATCGGGATTCTTTGTTGCTTAGATTTTGATTTCTAG ATGGGGAGAGAGGTCTCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGTAATCGGTTCTACGCCAATAAGCCGGAGCTTGCCGCCCGTCGCATCGAAGCAATCGGCTATCAGGTTGGCCATCAGCTCTCCGAACGGTATTTCTCCACCGCACTTTTTACCCTTCTTTTTGTATCTGTGAATTGTCTCGGGATCGGGATTCTTTGTTGCTTAGATTTTGATTTCTAG MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYFSTALFTLLFVSVNCLGIGILCCLDFDF Homology
BLAST of CmoCh10G011770 vs. ExPASy TrEMBL
Match: A0A6J1I0Q5 (trafficking protein particle complex subunit 6B OS=Cucurbita maxima OX=3661 GN=LOC111467932 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.4e-21 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CmoCh10G011770 vs. ExPASy TrEMBL
Match: A0A6J1HCN4 (trafficking protein particle complex subunit 6B OS=Cucurbita moschata OX=3662 GN=LOC111462123 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.4e-21 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CmoCh10G011770 vs. ExPASy TrEMBL
Match: A0A6A2YZ53 (Putative histone H2AXb-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111105pilonHSYRG00327 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.1e-21 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CmoCh10G011770 vs. ExPASy TrEMBL
Match: A0A6J1A796 (trafficking protein particle complex subunit 6B OS=Herrania umbratica OX=108875 GN=LOC110415401 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.1e-21 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CmoCh10G011770 vs. ExPASy TrEMBL
Match: A0A061F0S0 (Trafficking protein OS=Theobroma cacao OX=3641 GN=TCM_025944 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.1e-21 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CmoCh10G011770 vs. TAIR 10
Match: AT3G05000.1 (Transport protein particle (TRAPP) component ) HSP 1 Score: 94.7 bits (234), Expect = 3.5e-20 Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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