Homology
BLAST of CmoCh10G011290 vs. ExPASy Swiss-Prot
Match:
Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)
HSP 1 Score: 580.1 bits (1494), Expect = 5.9e-164
Identity = 339/897 (37.79%), Postives = 491/897 (54.74%), Query Frame = 0
Query: 279 VVLLQEFEHLFSEEMPSSLPPLRGI--EHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVS 338
V L Q++ + ++P + I +H I+ PGA +P Y K +EI + V
Sbjct: 558 VWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 617
Query: 339 ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 398
+LL ++ S SPCS PV+LVPKKDG++R+CVD R +NK TI P+PR+D++L +
Sbjct: 618 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 677
Query: 399 GCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 458
+FT +DL SGYHQI M D +KTAF T G YE+ VMPFGL NAPSTF R M
Sbjct: 678 NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 737
Query: 459 REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 518
R+ +FV VY DDIL++S+S ++H H+ VL L+NE L V KKC F E+ FLG+
Sbjct: 738 RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 797
Query: 519 VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 578
+ + + K AI+D+PTPK V + + F G+ ++YRRFI N S IA P+ +
Sbjct: 798 SIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDK 857
Query: 579 VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM 638
W + Q+ A + LK+ L ++P+L N ++ + + DAS GIGAVL + N+ L+
Sbjct: 858 SQ--WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLV 917
Query: 639 ----FFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNK 698
+FS+ L A YP + EL +++AL +++ L K F + TDH SL L+ +N+
Sbjct: 918 GVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNE 977
Query: 699 LNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFE--------- 758
RR +WL+ + T+ + ++Y G +N+VADA+SR + +R + E
Sbjct: 978 PARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSD 1037
Query: 759 --------HIKDLYQHDM------FFAPFVESCE-KGLIVDNYLLLDGFLFRKGKLCIPS 818
H+K+L QH++ F + + E NY L D ++ + +L +P
Sbjct: 1038 PLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVP- 1097
Query: 819 CSIRELLVREAHGGGLM-AHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQAKS-R 878
+ ++R H L H GV+ T +S ++WPK++H + + C+ C+ KS R
Sbjct: 1098 IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHR 1157
Query: 879 LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDA 938
+ HGL PLP+ G W+DISMDFV GLP T + I VVVDRFSK AHFI KT DA
Sbjct: 1158 PRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDA 1217
Query: 939 KHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTE 998
+ DL FR + HG P++I SDRDV+ + ++ L +LG K S+ HPQTDGQ+E
Sbjct: 1218 TQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSE 1277
Query: 999 VVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVYGFNPLTPIDLL 1058
+T+ +LRA N++ W LP IEF YN T +PFEI G+ P TP
Sbjct: 1278 RTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP---- 1337
Query: 1059 PIPSKEFVNFDANAKVEFVHKLHK---QVKEQIEKQNSKVATRINKGRKIVIFKPGDWVW 1118
I S + VN + VE L Q KEQ+E ++ T N+ RK ++ GD V
Sbjct: 1338 AIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVL 1397
Query: 1119 VHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPF 1139
VH R F K+ GPF+V+++INDNAY++DL NV L F
Sbjct: 1398 VH-RDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKKF 1444
BLAST of CmoCh10G011290 vs. ExPASy Swiss-Prot
Match:
Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)
HSP 1 Score: 578.2 bits (1489), Expect = 2.2e-163
Identity = 335/879 (38.11%), Postives = 486/879 (55.29%), Query Frame = 0
Query: 279 VVLLQEFEHLFSEEMPSSLPPLRGI--EHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVS 338
V L Q++ + ++P + I +H I+ PGA +P Y K +EI + V
Sbjct: 584 VWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 643
Query: 339 ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 398
+LL ++ S SPCS PV+LVPKKDG++R+CVD R +NK TI P+PR+D++L +
Sbjct: 644 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 703
Query: 399 GCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 458
+FT +DL SGYHQI M D +KTAF T G YE+ VMPFGL NAPSTF R M
Sbjct: 704 NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 763
Query: 459 REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 518
R+ +FV VY DDIL++S+S ++H H+ VL L+NE L V KKC F E+ FLG+
Sbjct: 764 RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 823
Query: 519 VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 578
+ + + K AI+D+PTPK V + + F G+ ++YRRFI N S IA P+ +
Sbjct: 824 SIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDK 883
Query: 579 VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM 638
W + Q+ A LK L ++P+L N ++ + + DAS GIGAVL + N+ L+
Sbjct: 884 SQ--WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLV 943
Query: 639 ----FFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNK 698
+FS+ L A YP + EL +++AL +++ L K F + TDH SL L+ +N+
Sbjct: 944 GVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNE 1003
Query: 699 LNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFE--------- 758
RR +WL+ + T+ + ++Y G +N+VADA+SR + +R + E
Sbjct: 1004 PARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSD 1063
Query: 759 --------HIKDLYQHDM------FFAPFVESCE-KGLIVDNYLLLDGFLFRKGKLCIPS 818
H+K+L QH++ F + + E NY L D ++ + +L +P
Sbjct: 1064 PLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVP- 1123
Query: 819 CSIRELLVREAHGGGLM-AHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQAKS-R 878
+ ++R H L H GV+ T +S ++WPK++H + + C+ C+ KS R
Sbjct: 1124 IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHR 1183
Query: 879 LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDA 938
+ HGL PLP+ G W+DISMDFV GLP T + I VVVDRFSK AHFI KT DA
Sbjct: 1184 PRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDA 1243
Query: 939 KHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTE 998
+ DL FR + HG P++I SDRDV+ + ++ L +LG K S+ HPQTDGQ+E
Sbjct: 1244 TQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSE 1303
Query: 999 VVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVYGFNPLTPIDLL 1058
+T+ +LRA + N++ W LP IEF YN T +PFEI G+ P TP
Sbjct: 1304 RTIQTLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP---- 1363
Query: 1059 PIPSKEFVNFDANAKVEFVHKLHK---QVKEQIEKQNSKVATRINKGRKIVIFKPGDWVW 1118
I S + VN + VE L Q KEQ+E ++ T N+ RK ++ GD V
Sbjct: 1364 AIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVL 1423
Query: 1119 VHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDL 1121
VH R F K+ GPF+V+++INDNAY++DL
Sbjct: 1424 VH-RDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDL 1452
BLAST of CmoCh10G011290 vs. ExPASy Swiss-Prot
Match:
P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)
HSP 1 Score: 520.4 bits (1339), Expect = 5.5e-146
Identity = 307/903 (34.00%), Postives = 489/903 (54.15%), Query Frame = 0
Query: 272 PSLPSDFVVLLQEFEHLFSEEMPSSLP-PLRGIEHKIDFIP---GAPIPNRPAYRTNPKE 331
P LP + +EF+ + +E LP P++G+E +++ PI N Y P +
Sbjct: 372 PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN---YPLPPGK 431
Query: 332 AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 391
+ + ++++ L G +RES + + PV+ VPKK+G+ RM VD + +NK +P+P
Sbjct: 432 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491
Query: 392 LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPST 451
++ +L ++ G ++FTK+DLKS YH IR+ GDE K AF+ G++E+LVMP+G++ AP+
Sbjct: 492 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551
Query: 452 FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 511
F +N +L E VV Y DDIL++SKS +H+ HV++VL L+N L +N KC F
Sbjct: 552 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611
Query: 512 MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 571
+V F+G+ +S G +E + + W PKN E+R F G ++ R+FI S +
Sbjct: 612 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671
Query: 572 PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLM 631
PLN L+KK+V + W Q A +K+ L S P+L +F +E DAS V +GAVL
Sbjct: 672 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731
Query: 632 QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 691
Q P+ ++S K++ A L Y DKE+ A++++L+ W+HYL + F I TDH
Sbjct: 732 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791
Query: 692 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 751
+L R+ N+ N+R A+W F++ F + I Y+ G N +ADALSR
Sbjct: 792 NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851
Query: 752 ---RYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 811
+N ++ + Y +D + + +K + +N L DG L K +
Sbjct: 852 EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911
Query: 812 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQ 871
+ +P+ + ++++ H G + H G+ +++ F W +R + + C C+
Sbjct: 912 ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971
Query: 872 AKSR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 931
KSR +P+G P+P PW +SMDF+ LP + GY+++FVVVDRFSKMA +PC
Sbjct: 972 NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031
Query: 932 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 991
K+ A+ A +F + V+ G PK I++D D F S W+ K + +S PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091
Query: 992 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVYGFNP-L 1051
DGQTE N+T+ +LR + + TW D + ++ +YN A+HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151
Query: 1052 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1111
+P++L K N +V + VKE + N K+ + K ++I F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211
Query: 1112 DWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDL 1139
D V V K F + +KL P GPF VL++ N Y++DLP K+ S+TF+V L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1257
BLAST of CmoCh10G011290 vs. ExPASy Swiss-Prot
Match:
P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)
HSP 1 Score: 520.4 bits (1339), Expect = 5.5e-146
Identity = 307/903 (34.00%), Postives = 489/903 (54.15%), Query Frame = 0
Query: 272 PSLPSDFVVLLQEFEHLFSEEMPSSLP-PLRGIEHKIDFIP---GAPIPNRPAYRTNPKE 331
P LP + +EF+ + +E LP P++G+E +++ PI N Y P +
Sbjct: 372 PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN---YPLPPGK 431
Query: 332 AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 391
+ + ++++ L G +RES + + PV+ VPKK+G+ RM VD + +NK +P+P
Sbjct: 432 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491
Query: 392 LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPST 451
++ +L ++ G ++FTK+DLKS YH IR+ GDE K AF+ G++E+LVMP+G++ AP+
Sbjct: 492 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551
Query: 452 FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 511
F +N +L E VV Y DDIL++SKS +H+ HV++VL L+N L +N KC F
Sbjct: 552 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611
Query: 512 MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 571
+V F+G+ +S G +E + + W PKN E+R F G ++ R+FI S +
Sbjct: 612 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671
Query: 572 PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLM 631
PLN L+KK+V + W Q A +K+ L S P+L +F +E DAS V +GAVL
Sbjct: 672 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731
Query: 632 QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 691
Q P+ ++S K++ A L Y DKE+ A++++L+ W+HYL + F I TDH
Sbjct: 732 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791
Query: 692 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 751
+L R+ N+ N+R A+W F++ F + I Y+ G N +ADALSR
Sbjct: 792 NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851
Query: 752 ---RYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 811
+N ++ + Y +D + + +K + +N L DG L K +
Sbjct: 852 EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911
Query: 812 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQ 871
+ +P+ + ++++ H G + H G+ +++ F W +R + + C C+
Sbjct: 912 ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971
Query: 872 AKSR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 931
KSR +P+G P+P PW +SMDF+ LP + GY+++FVVVDRFSKMA +PC
Sbjct: 972 NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031
Query: 932 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 991
K+ A+ A +F + V+ G PK I++D D F S W+ K + +S PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091
Query: 992 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVYGFNP-L 1051
DGQTE N+T+ +LR + + TW D + ++ +YN A+HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151
Query: 1052 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1111
+P++L K N +V + VKE + N K+ + K ++I F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211
Query: 1112 DWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDL 1139
D V V K F + +KL P GPF VL++ N Y++DLP K+ S+TF+V L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1257
BLAST of CmoCh10G011290 vs. ExPASy Swiss-Prot
Match:
P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)
HSP 1 Score: 520.4 bits (1339), Expect = 5.5e-146
Identity = 307/903 (34.00%), Postives = 489/903 (54.15%), Query Frame = 0
Query: 272 PSLPSDFVVLLQEFEHLFSEEMPSSLP-PLRGIEHKIDFIP---GAPIPNRPAYRTNPKE 331
P LP + +EF+ + +E LP P++G+E +++ PI N Y P +
Sbjct: 372 PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN---YPLPPGK 431
Query: 332 AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 391
+ + ++++ L G +RES + + PV+ VPKK+G+ RM VD + +NK +P+P
Sbjct: 432 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491
Query: 392 LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPST 451
++ +L ++ G ++FTK+DLKS YH IR+ GDE K AF+ G++E+LVMP+G++ AP+
Sbjct: 492 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551
Query: 452 FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 511
F +N +L E VV Y DDIL++SKS +H+ HV++VL L+N L +N KC F
Sbjct: 552 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611
Query: 512 MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 571
+V F+G+ +S G +E + + W PKN E+R F G ++ R+FI S +
Sbjct: 612 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671
Query: 572 PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLM 631
PLN L+KK+V + W Q A +K+ L S P+L +F +E DAS V +GAVL
Sbjct: 672 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731
Query: 632 QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 691
Q P+ ++S K++ A L Y DKE+ A++++L+ W+HYL + F I TDH
Sbjct: 732 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791
Query: 692 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 751
+L R+ N+ N+R A+W F++ F + I Y+ G N +ADALSR
Sbjct: 792 NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851
Query: 752 ---RYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 811
+N ++ + Y +D + + +K + +N L DG L K +
Sbjct: 852 EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911
Query: 812 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQ 871
+ +P+ + ++++ H G + H G+ +++ F W +R + + C C+
Sbjct: 912 ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971
Query: 872 AKSR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 931
KSR +P+G P+P PW +SMDF+ LP + GY+++FVVVDRFSKMA +PC
Sbjct: 972 NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031
Query: 932 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 991
K+ A+ A +F + V+ G PK I++D D F S W+ K + +S PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091
Query: 992 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVYGFNP-L 1051
DGQTE N+T+ +LR + + TW D + ++ +YN A+HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151
Query: 1052 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1111
+P++L K N +V + VKE + N K+ + K ++I F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211
Query: 1112 DWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDL 1139
D V V K F + +KL P GPF VL++ N Y++DLP K+ S+TF+V L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1257
BLAST of CmoCh10G011290 vs. ExPASy TrEMBL
Match:
A0A2N9HBD3 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12373 PE=4 SV=1)
HSP 1 Score: 1696.4 bits (4392), Expect = 0.0e+00
Identity = 811/1205 (67.30%), Postives = 979/1205 (81.24%), Query Frame = 0
Query: 5 EGEIVTDDEAHDD----INEETDESEEFSEEDPTHISLVTRRALNTHIKEDGLD-QRENL 64
+GE+ T+ E+ D + + D+ E+ E SLV RRAL+ +KED ++ QREN+
Sbjct: 356 DGEVETESESDADQMPMLEDTCDDDVEYPVEGE---SLVARRALSAQVKEDDMEQQRENI 415
Query: 65 FQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQ 124
F TRC + + CS++ID GSCTNV S+ LV++LN T HP PYKL+WLNDCGE++VT+Q
Sbjct: 416 FHTRCHINNKVCSMIIDGGSCTNVASTTLVEKLNFPTLKHPMPYKLKWLNDCGEIKVTKQ 475
Query: 125 TLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIP 184
L+SF+IGKY D+VLCDVV MH G +LLGRPWQFDR+ ++DG+ NRYSF + R TLIP
Sbjct: 476 VLISFSIGKYKDEVLCDVVPMHAGHILLGRPWQFDRKAIHDGFKNRYSFVKDSRTVTLIP 535
Query: 185 LSPKDVFIDHCKLEKKR------QEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKA 244
L+P+ V+ D KL+++ + +K E EKES KK +K+E T E+++
Sbjct: 536 LTPRQVYEDQVKLKRENELKKNCETESSKKEDEKESERKKESEKKKERVTNTSEQQK--- 595
Query: 245 KSVSLYVTSSEARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEM 304
K VS Y +S+ +N +NQ I VL+ K AC+ TN L+ SLPS + LLQE+E +F ++
Sbjct: 596 KQVSFYAKASDVKNAFYANQPIFVLLYKEACFNTNELDESLPSVVISLLQEYEDVFPNDV 655
Query: 305 PSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSV 364
PS LPP+RGIEH+IDF+PGA IPNRPAYR+NP+E +E+QRQV ELLAKG+VRES+SPC+V
Sbjct: 656 PSGLPPIRGIEHQIDFVPGATIPNRPAYRSNPEETKELQRQVEELLAKGHVRESMSPCAV 715
Query: 365 PVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQI 424
PV+LVPKKDG+WRMCVDCRAIN IT+KYRHPIPRLDDMLDELHG +FTKIDLKSGYHQI
Sbjct: 716 PVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCIFTKIDLKSGYHQI 775
Query: 425 RMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILV 484
RM GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH LR +LG+FVVVYFDDILV
Sbjct: 776 RMKEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRAFLGRFVVVYFDDILV 835
Query: 485 YSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAI 544
YSKSLD+HI H+ VLT LR E LY NLKKCSFC++KV FLGFVV + G+ VDEEKVKAI
Sbjct: 836 YSKSLDEHIDHLHCVLTVLRKEKLYANLKKCSFCLDKVVFLGFVVGAKGITVDEEKVKAI 895
Query: 545 KDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLK 604
K+WPTPK+++EVRSFHGLASFYRRF+K+FST+A+PL E+VKK+V F W +Q+ AF +K
Sbjct: 896 KEWPTPKSITEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIK 955
Query: 605 EKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKE 664
E+L APLLALP+F TFEIECDASG+GIGAVLMQ +RP+ +FSEKL GA L YPTYDKE
Sbjct: 956 ERLCGAPLLALPDFSKTFEIECDASGIGIGAVLMQEKRPIAYFSEKLNGAVLNYPTYDKE 1015
Query: 665 LYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQ 724
LYALVRAL+TWQHYLWPKEF+IHTDHESLKHL+ Q KLNRRHA+W+EFIETFPYVIKYKQ
Sbjct: 1016 LYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRRHAQWMEFIETFPYVIKYKQ 1075
Query: 725 GKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLD 784
GKENIVADALSRRY L++TLNA+LLGFE++K+LY +D FA +CEK + +D
Sbjct: 1076 GKENIVADALSRRYALISTLNAKLLGFEYVKELYVNDDDFASVFAACEKAAF-GKFYRID 1135
Query: 785 GFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCG 844
G+LFR+ +LC+P+ S+RELLVREAHGGGLM H GV KT DML EHFFWPKM+ DV +VC
Sbjct: 1136 GYLFRENRLCVPNSSMRELLVREAHGGGLMGHFGVRKTLDMLHEHFFWPKMKRDVERVCS 1195
Query: 845 RCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMA 904
RC+ C+QAKSR+ PHGLY+PLPVP+ PW+DISMDFVLGLPR+RKG DSIFVVVDRFSKMA
Sbjct: 1196 RCVTCRQAKSRVLPHGLYTPLPVPSAPWVDISMDFVLGLPRSRKGRDSIFVVVDRFSKMA 1255
Query: 905 HFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYST 964
HFI CHKTDDA HIADLFFRE+VRLHG+P+SIVSDRDVKFLS+FW+VLWGKLGTKL++ST
Sbjct: 1256 HFISCHKTDDATHIADLFFREIVRLHGVPRSIVSDRDVKFLSYFWKVLWGKLGTKLLFST 1315
Query: 965 TCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVY 1024
TCHPQTDGQTEVVNRT++ +LR II KNLK WEDCLPFIEFAYNR+VHSTT+ +PFEIVY
Sbjct: 1316 TCHPQTDGQTEVVNRTLSTLLRTIIQKNLKNWEDCLPFIEFAYNRSVHSTTEFSPFEIVY 1375
Query: 1025 GFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVI 1084
GFNPLTP+DLLP+P E + D K E V KLH+ V++ IEK+N + A + NKGR+ VI
Sbjct: 1376 GFNPLTPLDLLPLPVNERTSLDGQKKAEMVKKLHESVRQHIEKKNEQYANKANKGRRQVI 1435
Query: 1085 FKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVV 1144
F+PGDWVWVH RKERFP +R+SKL PRGDGPFQVLERINDNAYK+DLPG+Y +SATFNV
Sbjct: 1436 FQPGDWVWVHMRKERFPARRRSKLHPRGDGPFQVLERINDNAYKLDLPGEYNISATFNVS 1495
Query: 1145 DLSPFDVGDGLDSRTNPSQEGENDMNHD----QGISIPQGPITRTRAKKLQQTLYSYIQA 1195
DLS FDVGD DSR+NP +E ND N + +P GPITR R+KK+++ L IQ
Sbjct: 1496 DLSLFDVGD--DSRSNPFEERGNDENQQALLKDPLHVPVGPITRARSKKIKEALNGLIQD 1551
BLAST of CmoCh10G011290 vs. ExPASy TrEMBL
Match:
A0A2N9GY98 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35149 PE=4 SV=1)
HSP 1 Score: 1695.6 bits (4390), Expect = 0.0e+00
Identity = 809/1205 (67.14%), Postives = 979/1205 (81.24%), Query Frame = 0
Query: 5 EGEIVTDDEAHDD----INEETDESEEFSEEDPTHISLVTRRALNTHIKEDGLD-QRENL 64
+GE+ T+ E+ D + + D+ E+ E SLV RRAL+ +KED ++ QREN+
Sbjct: 345 DGEVETESESDADQMPMLEDTCDDDVEYPVEGE---SLVARRALSAQVKEDDMEQQRENI 404
Query: 65 FQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQ 124
F TRC + + CS++ID GSCTNV S+ LV++LN T HP PYKL+WLNDCGE++VT+Q
Sbjct: 405 FHTRCHINNKVCSMIIDGGSCTNVASTTLVEKLNFPTLKHPMPYKLKWLNDCGEIKVTKQ 464
Query: 125 TLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIP 184
L+SF+IGKY D+VLCDVV MH G +LLGRPWQFDR+ ++DG+ NRYSF + R TLIP
Sbjct: 465 VLISFSIGKYKDEVLCDVVPMHAGHILLGRPWQFDRKAIHDGFKNRYSFVKDSRTVTLIP 524
Query: 185 LSPKDVFIDHCKLEKKR------QEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKA 244
L+P+ V+ D KL+++ + +K E EKES KK +K+E T E+++
Sbjct: 525 LTPRQVYEDQVKLKRENELKKNCETESSKKEDEKESERKKESEKKKERVTNTSEQQK--- 584
Query: 245 KSVSLYVTSSEARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEM 304
K VS Y +S+ +N +NQ I VL+ K AC+ TN L+ SLPS + LLQE+E +F ++
Sbjct: 585 KQVSFYAKASDVKNAFYANQPIFVLLYKEACFNTNELDESLPSVVISLLQEYEDVFPNDV 644
Query: 305 PSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSV 364
PS LPP+RGIEH+IDF+PGA IPNRPAYR+NP+E +E+QRQV ELLAKG+VRES+SPC+V
Sbjct: 645 PSGLPPIRGIEHQIDFVPGATIPNRPAYRSNPEETKELQRQVEELLAKGHVRESMSPCAV 704
Query: 365 PVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQI 424
PV+LVPKKDG+WRMCVDCRAIN IT+KYRHPIPRLDDMLDELHG +FTKIDLKSGYHQI
Sbjct: 705 PVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCIFTKIDLKSGYHQI 764
Query: 425 RMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILV 484
RM GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH LR +LG+FVVVYFDDILV
Sbjct: 765 RMKEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRAFLGRFVVVYFDDILV 824
Query: 485 YSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAI 544
YSKSLD+HI H+ VLT LR E LY NLKKCSFC++KV FLGFVV + G+ VDEEKVKAI
Sbjct: 825 YSKSLDEHIDHLHCVLTVLRKEKLYANLKKCSFCLDKVVFLGFVVGAKGITVDEEKVKAI 884
Query: 545 KDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLK 604
K+WPTPK+++EVRSFHGLASFYRRF+K+FST+A+PL E+VKK+V F W +Q+ AF +K
Sbjct: 885 KEWPTPKSITEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIK 944
Query: 605 EKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKE 664
E+L APLLALP+F TFEIECDASG+GIGAVLMQ +RP+ +FSEKL GA L YPTYDKE
Sbjct: 945 ERLCGAPLLALPDFSKTFEIECDASGIGIGAVLMQEKRPIAYFSEKLNGAVLNYPTYDKE 1004
Query: 665 LYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQ 724
LYALVRAL+TWQHYLWPKEF+IHTDHESLKHL+ Q KLNRRHA+W+EFIETFPYVIKYKQ
Sbjct: 1005 LYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRRHAQWMEFIETFPYVIKYKQ 1064
Query: 725 GKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLD 784
GKENIVADALSRRY L++TLNA+LLGFE++K+LY +D FA +CEK + +D
Sbjct: 1065 GKENIVADALSRRYALISTLNAKLLGFEYVKELYVNDDDFASVFAACEKAAF-GKFYRID 1124
Query: 785 GFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCG 844
G+LFR+ +LC+P+ S+RELLVREAHGGGLM H GV KT DML EHFFWPKM+ DV +VC
Sbjct: 1125 GYLFRENRLCVPNSSMRELLVREAHGGGLMGHFGVRKTLDMLHEHFFWPKMKRDVERVCS 1184
Query: 845 RCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMA 904
RC+ C+QAKSR+ PHGLY+PLPVP+ PW+DISMDFVLGLPR+RKG DSIFVVVDRFSKMA
Sbjct: 1185 RCVTCRQAKSRVLPHGLYTPLPVPSAPWVDISMDFVLGLPRSRKGRDSIFVVVDRFSKMA 1244
Query: 905 HFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYST 964
HFI CHKTDDA HIADLFFRE+VRLHG+P+SIVSDRDVKFLS+FW+VLWGKLGTKL++ST
Sbjct: 1245 HFISCHKTDDATHIADLFFREIVRLHGVPRSIVSDRDVKFLSYFWKVLWGKLGTKLLFST 1304
Query: 965 TCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVY 1024
TCHPQTDGQTEVVNRT++ +LR II KNLK WEDCLPFIEFAYNR+VHSTT+ +PFEIVY
Sbjct: 1305 TCHPQTDGQTEVVNRTLSTLLRTIIQKNLKNWEDCLPFIEFAYNRSVHSTTEFSPFEIVY 1364
Query: 1025 GFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVI 1084
GFNPLTP+DLLP+P E + D K E V KLH+ +++ IEK+N + A + NKGR+ VI
Sbjct: 1365 GFNPLTPLDLLPLPVNERTSLDGQKKAEMVKKLHESIRQHIEKKNEQYANKANKGRRQVI 1424
Query: 1085 FKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVV 1144
F+PGDWVWVH RKERFP +R+SKL PRGDGPFQVLERINDNAYK+DLPG+Y +SATFN+
Sbjct: 1425 FQPGDWVWVHMRKERFPARRRSKLHPRGDGPFQVLERINDNAYKLDLPGEYNISATFNIS 1484
Query: 1145 DLSPFDVGDGLDSRTNPSQEGENDMNHD----QGISIPQGPITRTRAKKLQQTLYSYIQA 1195
DLS FDVGD DSR+NP +E ND N + +P GPITR R+KK+++ L IQ
Sbjct: 1485 DLSLFDVGD--DSRSNPFEERGNDENQQALLKDPLHVPVGPITRARSKKIKEALNGLIQD 1540
BLAST of CmoCh10G011290 vs. ExPASy TrEMBL
Match:
A0A2N9G0F9 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20920 PE=4 SV=1)
HSP 1 Score: 1694.1 bits (4386), Expect = 0.0e+00
Identity = 810/1205 (67.22%), Postives = 979/1205 (81.24%), Query Frame = 0
Query: 5 EGEIVTDDEAHDD----INEETDESEEFSEEDPTHISLVTRRALNTHIKEDGLD-QRENL 64
+GE+ T+ E+ D + + D+ E+ E SLV RRAL+ +KED ++ QREN+
Sbjct: 356 DGEVETESESDADQMPMLEDTCDDDVEYPVEGE---SLVARRALSAQVKEDDMEQQRENI 415
Query: 65 FQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQ 124
F TRC + + CS++ID GSCTNV S+ LV++LN T HP PYKL+WLNDCGE++VT+Q
Sbjct: 416 FHTRCHINNKVCSMIIDGGSCTNVASTTLVEKLNFPTLKHPMPYKLKWLNDCGEIKVTKQ 475
Query: 125 TLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIP 184
L+SF+IGKY D+VLCDVV MH G +LLGRPWQFDR+ ++DG+ NRYSF + R TL+P
Sbjct: 476 VLISFSIGKYKDEVLCDVVPMHAGHILLGRPWQFDRKAIHDGFKNRYSFVKDSRTVTLVP 535
Query: 185 LSPKDVFIDHCKLEKKR------QEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKA 244
L+P+ V+ D KL+++ + +K E EKES KK +K+E T E+++
Sbjct: 536 LTPRQVYEDQVKLKRENELKKNCETESSKKEDEKESERKKESEKKKERVTNTSEQQK--- 595
Query: 245 KSVSLYVTSSEARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEM 304
K VS Y +S+ ++ +NQ I VL+ K AC+ TN L+ SLPS V LLQE+E +F ++
Sbjct: 596 KQVSFYAKASDVKSAFYANQPIFVLLYKEACFNTNELDESLPSVVVSLLQEYEDVFPNDV 655
Query: 305 PSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSV 364
PS LPP+RGIEH+IDF+PGA IPNRPAYR+NP+E +E+QRQV ELLAKG+VRES+SPC+V
Sbjct: 656 PSGLPPIRGIEHQIDFVPGATIPNRPAYRSNPEETKELQRQVEELLAKGHVRESMSPCAV 715
Query: 365 PVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQI 424
PV+LVPKKDG+WRMCVDCRAIN IT+KYRHPIPRLDDMLDELHG +FTKIDLKSGYHQI
Sbjct: 716 PVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCIFTKIDLKSGYHQI 775
Query: 425 RMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILV 484
RM GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH LR +LG+FVVVYFDDILV
Sbjct: 776 RMKEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRAFLGRFVVVYFDDILV 835
Query: 485 YSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAI 544
YSKSLD+HI H+ VLT LR E LY NLKKCSFC++KV FLGFVV + G+ VDEEKVKAI
Sbjct: 836 YSKSLDEHIDHLHCVLTVLRKEKLYANLKKCSFCLDKVVFLGFVVGAKGIAVDEEKVKAI 895
Query: 545 KDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLK 604
K+WPTPK+++EVRSFHGLASFYRRF+K+FST+A+PL E+VKK+V F W +Q+ AF +K
Sbjct: 896 KEWPTPKSITEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIK 955
Query: 605 EKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKE 664
E+L APLLALP+F TFEIECDASG+GIGAVLMQ +RP+ +FSEKL GA+L YPTYDKE
Sbjct: 956 ERLCGAPLLALPDFSKTFEIECDASGIGIGAVLMQEKRPIAYFSEKLNGAALNYPTYDKE 1015
Query: 665 LYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQ 724
LYALVRAL+TWQHYLWPKEF+IHTDHESLKHL+ Q KLNRRHA+W+EFIETFPYVIKYKQ
Sbjct: 1016 LYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRRHAQWMEFIETFPYVIKYKQ 1075
Query: 725 GKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLD 784
GKENIVADALSRRY L++TLNA+LLGFE++K+LY +D FA +CEK + LD
Sbjct: 1076 GKENIVADALSRRYALISTLNAKLLGFEYVKELYVNDDDFASVFAACEKAAF-GKFYRLD 1135
Query: 785 GFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCG 844
G+LFR+ +LC+P+ S+RELLVREAHGGGLM H GV KT D+L EHFFWPKM+ DV +VC
Sbjct: 1136 GYLFRENRLCVPNSSMRELLVREAHGGGLMGHFGVRKTLDVLHEHFFWPKMKRDVERVCS 1195
Query: 845 RCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMA 904
RC+ C+QAKSR+ PHGLY+PLPVP+ PW+DISMDFVLGLPR+RKG DSIFVVVDRFSKMA
Sbjct: 1196 RCVTCRQAKSRVLPHGLYTPLPVPSAPWVDISMDFVLGLPRSRKGRDSIFVVVDRFSKMA 1255
Query: 905 HFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYST 964
HFI CHKTDDA HIADLFFRE+VRLHG+P+SIVSDRDVKFLS+FW+VLWGKLGTKL++ST
Sbjct: 1256 HFISCHKTDDATHIADLFFREIVRLHGVPRSIVSDRDVKFLSYFWKVLWGKLGTKLLFST 1315
Query: 965 TCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVY 1024
TCHPQTDGQTEVVNRT++ +LR II KNLK WEDCLPFIEFAYNR+VHSTT +PFEIVY
Sbjct: 1316 TCHPQTDGQTEVVNRTLSTLLRTIIQKNLKNWEDCLPFIEFAYNRSVHSTTDFSPFEIVY 1375
Query: 1025 GFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVI 1084
GFNPLTP+DLLP+P E + D K E V KLH+ V++ IEK+N + A + NKGR+ VI
Sbjct: 1376 GFNPLTPLDLLPLPVNERTSLDGQKKAEMVKKLHESVRQHIEKKNEQYANKANKGRRQVI 1435
Query: 1085 FKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVV 1144
F+PGDWVWVH RKERFP +R+SKL PRGDGPFQVLERINDNAYK+DLPG+Y +SATFNV
Sbjct: 1436 FEPGDWVWVHMRKERFPARRRSKLHPRGDGPFQVLERINDNAYKLDLPGEYNISATFNVS 1495
Query: 1145 DLSPFDVGDGLDSRTNPSQEGENDMNHD----QGISIPQGPITRTRAKKLQQTLYSYIQA 1195
DLS FDVGD DSR+NP +E ND N + +P GPITR R+KK+++ L IQ
Sbjct: 1496 DLSLFDVGD--DSRSNPFEERGNDENQQALLKDPLHVPVGPITRARSKKIKEALNGLIQD 1551
BLAST of CmoCh10G011290 vs. ExPASy TrEMBL
Match:
A0A2N9ENW8 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8418 PE=4 SV=1)
HSP 1 Score: 1694.1 bits (4386), Expect = 0.0e+00
Identity = 810/1205 (67.22%), Postives = 979/1205 (81.24%), Query Frame = 0
Query: 5 EGEIVTDDEAHDD----INEETDESEEFSEEDPTHISLVTRRALNTHIKEDGLD-QRENL 64
+GE+ T+ E+ D + + D+ E+ E SLV RRAL+ +KED ++ QREN+
Sbjct: 165 DGEVETESESDADQMPMLEDTCDDDVEYPVEGE---SLVARRALSAQVKEDDMEQQRENI 224
Query: 65 FQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQ 124
F TRC + + CS++ID GSCTNV S+ LV++LN T HP PYKL+WLNDCGE++VT+Q
Sbjct: 225 FHTRCHINNKVCSMIIDGGSCTNVASTTLVEKLNFPTLKHPMPYKLKWLNDCGEIKVTKQ 284
Query: 125 TLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIP 184
L+SF+IGKY D+VLCDVV MH G +LLGRPWQFDR+ ++DG+ NRYSF + R TL+P
Sbjct: 285 VLISFSIGKYKDEVLCDVVPMHAGHILLGRPWQFDRKAIHDGFKNRYSFVKDSRTVTLVP 344
Query: 185 LSPKDVFIDHCKLEKKR------QEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKA 244
L+P+ V+ D KL+++ + +K E EKES KK +K+E T E+++
Sbjct: 345 LTPRQVYEDQVKLKRENELKKNCETESSKKEDEKESERKKESEKKKERVTNTSEQQK--- 404
Query: 245 KSVSLYVTSSEARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEM 304
K VS Y +S+ ++ +NQ I VL+ K AC+ TN L+ SLPS V LLQE+E +F ++
Sbjct: 405 KQVSFYAKASDVKSAFYANQPIFVLLYKEACFNTNELDESLPSVVVSLLQEYEDVFPNDV 464
Query: 305 PSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSV 364
PS LPP+RGIEH+IDF+PGA IPNRPAYR+NP+E +E+QRQV ELLAKG+VRES+SPC+V
Sbjct: 465 PSGLPPIRGIEHQIDFVPGATIPNRPAYRSNPEETKELQRQVEELLAKGHVRESMSPCAV 524
Query: 365 PVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQI 424
PV+LVPKKDG+WRMCVDCRAIN IT+KYRHPIPRLDDMLDELHG +FTKIDLKSGYHQI
Sbjct: 525 PVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCIFTKIDLKSGYHQI 584
Query: 425 RMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILV 484
RM GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH LR +LG+FVVVYFDDILV
Sbjct: 585 RMKEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRAFLGRFVVVYFDDILV 644
Query: 485 YSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAI 544
YSKSLD+HI H+ VLT LR E LY NLKKCSFC++KV FLGFVV + G+ VDEEKVKAI
Sbjct: 645 YSKSLDEHIDHLHCVLTVLRKEKLYANLKKCSFCLDKVVFLGFVVGAKGIAVDEEKVKAI 704
Query: 545 KDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLK 604
K+WPTPK+++EVRSFHGLASFYRRF+K+FST+A+PL E+VKK+V F W +Q+ AF +K
Sbjct: 705 KEWPTPKSITEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIK 764
Query: 605 EKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKE 664
E+L APLLALP+F TFEIECDASG+GIGAVLMQ +RP+ +FSEKL GA+L YPTYDKE
Sbjct: 765 ERLCGAPLLALPDFSKTFEIECDASGIGIGAVLMQEKRPIAYFSEKLNGAALNYPTYDKE 824
Query: 665 LYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQ 724
LYALVRAL+TWQHYLWPKEF+IHTDHESLKHL+ Q KLNRRHA+W+EFIETFPYVIKYKQ
Sbjct: 825 LYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRRHAQWMEFIETFPYVIKYKQ 884
Query: 725 GKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLD 784
GKENIVADALSRRY L++TLNA+LLGFE++K+LY +D FA +CEK + LD
Sbjct: 885 GKENIVADALSRRYALISTLNAKLLGFEYVKELYVNDDDFASVFAACEKAAF-GKFYRLD 944
Query: 785 GFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCG 844
G+LFR+ +LC+P+ S+RELLVREAHGGGLM H GV KT D+L EHFFWPKM+ DV +VC
Sbjct: 945 GYLFRENRLCVPNSSMRELLVREAHGGGLMGHFGVRKTLDVLHEHFFWPKMKRDVERVCS 1004
Query: 845 RCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMA 904
RC+ C+QAKSR+ PHGLY+PLPVP+ PW+DISMDFVLGLPR+RKG DSIFVVVDRFSKMA
Sbjct: 1005 RCVTCRQAKSRVLPHGLYTPLPVPSAPWVDISMDFVLGLPRSRKGRDSIFVVVDRFSKMA 1064
Query: 905 HFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYST 964
HFI CHKTDDA HIADLFFRE+VRLHG+P+SIVSDRDVKFLS+FW+VLWGKLGTKL++ST
Sbjct: 1065 HFISCHKTDDATHIADLFFREIVRLHGVPRSIVSDRDVKFLSYFWKVLWGKLGTKLLFST 1124
Query: 965 TCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVY 1024
TCHPQTDGQTEVVNRT++ +LR II KNLK WEDCLPFIEFAYNR+VHSTT +PFEIVY
Sbjct: 1125 TCHPQTDGQTEVVNRTLSTLLRTIIQKNLKNWEDCLPFIEFAYNRSVHSTTDFSPFEIVY 1184
Query: 1025 GFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVI 1084
GFNPLTP+DLLP+P E + D K E V KLH+ V++ IEK+N + A + NKGR+ VI
Sbjct: 1185 GFNPLTPLDLLPLPVNERTSLDGQKKAEMVKKLHESVRQHIEKKNEQYANKANKGRRQVI 1244
Query: 1085 FKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVV 1144
F+PGDWVWVH RKERFP +R+SKL PRGDGPFQVLERINDNAYK+DLPG+Y +SATFNV
Sbjct: 1245 FEPGDWVWVHMRKERFPARRRSKLHPRGDGPFQVLERINDNAYKLDLPGEYNISATFNVS 1304
Query: 1145 DLSPFDVGDGLDSRTNPSQEGENDMNHD----QGISIPQGPITRTRAKKLQQTLYSYIQA 1195
DLS FDVGD DSR+NP +E ND N + +P GPITR R+KK+++ L IQ
Sbjct: 1305 DLSLFDVGD--DSRSNPFEERGNDENQQALLKDPLHVPVGPITRARSKKIKEALNGLIQD 1360
BLAST of CmoCh10G011290 vs. ExPASy TrEMBL
Match:
A0A2N9F7E8 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10964 PE=4 SV=1)
HSP 1 Score: 1693.7 bits (4385), Expect = 0.0e+00
Identity = 809/1205 (67.14%), Postives = 979/1205 (81.24%), Query Frame = 0
Query: 5 EGEIVTDDEAHDD----INEETDESEEFSEEDPTHISLVTRRALNTHIKEDGLD-QRENL 64
+GE+ T+ E+ D + + D+ E+ E SLV RRAL+ +KED ++ QREN+
Sbjct: 658 DGEVETESESDADQMPMLEDTCDDDVEYPVEGE---SLVARRALSAQVKEDDMEQQRENI 717
Query: 65 FQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQ 124
F TRC + + CS++ID GSCTNV S+ LV++LN T HP PYKL+WLNDCGE++VT+Q
Sbjct: 718 FHTRCHINNKVCSMIIDGGSCTNVASTTLVEKLNFPTLKHPMPYKLKWLNDCGEIKVTKQ 777
Query: 125 TLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIP 184
L+SF+IGKY D+VLCDVV MH G +LLGRPWQFDR+ ++DG+ NRYSF + R TL+P
Sbjct: 778 VLISFSIGKYKDEVLCDVVPMHAGHILLGRPWQFDRKAIHDGFKNRYSFVKDSRTVTLVP 837
Query: 185 LSPKDVFIDHCKLEKKR------QEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKA 244
L+P+ V+ D KL+++ + +K E EKES KK +K+E T E+++
Sbjct: 838 LTPRQVYEDQVKLKRENELKKNCETESSKKEDEKESERKKESEKKKERVTNTSEQQK--- 897
Query: 245 KSVSLYVTSSEARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEM 304
K VS Y +S+ ++ +NQ I VL+ K AC+ TN L+ SLPS + LLQE+E +F ++
Sbjct: 898 KQVSFYAKASDVKSAFYANQPIFVLLYKEACFNTNELDESLPSVVISLLQEYEDVFPNDV 957
Query: 305 PSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSV 364
PS LPP+RGIEH+IDF+PGA IPNRPAYR+NP+E +E+QRQV ELLAKG+VRES+SPC+V
Sbjct: 958 PSGLPPIRGIEHQIDFVPGATIPNRPAYRSNPEETKELQRQVEELLAKGHVRESMSPCAV 1017
Query: 365 PVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQI 424
PV+LVPKKDG+WRMCVDCRAIN IT+KYRHPIPRLDDMLDELHG +FTKIDLKSGYHQI
Sbjct: 1018 PVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCIFTKIDLKSGYHQI 1077
Query: 425 RMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILV 484
RM GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH LR +LG+FVVVYFDDILV
Sbjct: 1078 RMKEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRAFLGRFVVVYFDDILV 1137
Query: 485 YSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAI 544
YSKSLD+HI H+ VLT LR E LY NLKKCSFC++KV FLGFVV + G+ VDEEKVKAI
Sbjct: 1138 YSKSLDEHIDHLHCVLTVLRKEKLYANLKKCSFCLDKVVFLGFVVGAKGIAVDEEKVKAI 1197
Query: 545 KDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLK 604
K+WPTPK+++EVRSFHGLASFYRRF+K+FST+A+PL E+VKK+V F W +Q+ AF +K
Sbjct: 1198 KEWPTPKSITEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIK 1257
Query: 605 EKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKE 664
E+L APLLALP+F TFEIECDASG+GIGAVLMQ +RP+ +FSEKL GA+L YPTYDKE
Sbjct: 1258 ERLCGAPLLALPDFSKTFEIECDASGIGIGAVLMQEKRPIAYFSEKLNGAALNYPTYDKE 1317
Query: 665 LYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQ 724
LYALVRAL+TWQHYLWPKEF+IHTDHESLKHL+ Q KLNRRHA+W+EFIETFPYVIKYKQ
Sbjct: 1318 LYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRRHAQWMEFIETFPYVIKYKQ 1377
Query: 725 GKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLD 784
GKENIVADALSRRY L++TLNA+LLGFE++K+LY +D FA +CEK + LD
Sbjct: 1378 GKENIVADALSRRYALISTLNAKLLGFEYVKELYVNDDDFASVFAACEKAAF-GKFYRLD 1437
Query: 785 GFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCG 844
G+LFR+ +LC+P+ S+RELLVREAHGGGLM H GV KT D+L EHFFWPKM+ DV +VC
Sbjct: 1438 GYLFRENRLCVPNSSMRELLVREAHGGGLMGHFGVRKTLDVLHEHFFWPKMKRDVERVCS 1497
Query: 845 RCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMA 904
RC+ C+QAKSR+ PHGLY+PLPVP+ PW+DISMDFVLGLPR+RKG DSIFVVVDRFSKMA
Sbjct: 1498 RCVTCRQAKSRVLPHGLYTPLPVPSAPWVDISMDFVLGLPRSRKGRDSIFVVVDRFSKMA 1557
Query: 905 HFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYST 964
HFI CHKTDDA HIADLFFRE+VRLHG+P+SIVSDRDVKFLS+FW+VLWGKLGTKL++ST
Sbjct: 1558 HFISCHKTDDATHIADLFFREIVRLHGVPRSIVSDRDVKFLSYFWKVLWGKLGTKLLFST 1617
Query: 965 TCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVY 1024
TCHPQTDGQTEVVNRT++ +LR II KNLK WEDCLPFIEFAYNR+VHSTT +PFEIVY
Sbjct: 1618 TCHPQTDGQTEVVNRTLSTLLRTIIQKNLKNWEDCLPFIEFAYNRSVHSTTDFSPFEIVY 1677
Query: 1025 GFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVI 1084
GFNPLTP+DLLP+P E + D K E V KLH+ V++ IEK+N + A + NKGR+ VI
Sbjct: 1678 GFNPLTPLDLLPLPVNERTSLDGQKKAEMVKKLHESVRQHIEKKNEQYANKANKGRRQVI 1737
Query: 1085 FKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVV 1144
F+PGDWVWVH RKERFP +R+SKL PRGDGPFQVLERINDNAYK+DLPG+Y +SATFNV
Sbjct: 1738 FEPGDWVWVHMRKERFPARRRSKLHPRGDGPFQVLERINDNAYKLDLPGEYNISATFNVS 1797
Query: 1145 DLSPFDVGDGLDSRTNPSQEGENDMNHD----QGISIPQGPITRTRAKKLQQTLYSYIQA 1195
DLS FDVGD DSR+NP +E ND N + +P GPITR R+KK+++ L IQ
Sbjct: 1798 DLSLFDVGD--DSRSNPFEERGNDENQQALLKDPLHVPVGPITRARSKKIKEALNGLIQD 1853
BLAST of CmoCh10G011290 vs. NCBI nr
Match:
PSS05945.1 (Integrase [Actinidia chinensis var. chinensis])
HSP 1 Score: 1645.2 bits (4259), Expect = 0.0e+00
Identity = 794/1227 (64.71%), Postives = 974/1227 (79.38%), Query Frame = 0
Query: 6 GEIVTDDEAHDDINEETDESEEFSEE--DPTHISLVTRRALNTHIKEDGLDQRENLFQTR 65
GEI TDDE DD+ + + + EE P ++LV RR+L+ +K + QREN+F TR
Sbjct: 364 GEIETDDE--DDLKSMSPLEDAYEEEYLAPDALTLVARRSLSLQMKNEDEVQRENIFYTR 423
Query: 66 CLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQTLVS 125
C V+ CSV+ID GSCTNV S+ +V +L L T HP+PYKLQWLN+ GE+RVT+Q LV+
Sbjct: 424 CYVKDKVCSVIIDGGSCTNVASTTMVDKLGLPTILHPKPYKLQWLNNSGELRVTKQVLVA 483
Query: 126 FTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIPLSPK 185
F IGKY D+VLCDVV M G LLLGRPWQFDRRV +DG+ N+YSF N R TL+PLSPK
Sbjct: 484 FRIGKYEDEVLCDVVPMQAGHLLLGRPWQFDRRVKHDGFTNKYSFVLNQRPITLVPLSPK 543
Query: 186 DVFIDHCKLEKKRQEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKAKSVSLYVTSS 245
V D +L+K+ ++ K+E E+E+ EKK EK + K ERK K + Y +
Sbjct: 544 QVHEDQVRLQKESEQ--KKSEKEREAEEKK--REKAIIDPAIEVKTERKQK--NFYAKAK 603
Query: 246 EARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGI 305
E + + SNQ ++VL+ K A TN L+ +PS V LLQEFE +F +EMP LPP+RGI
Sbjct: 604 EIKRAMFSNQPMIVLLYKEAFINTNGLDSVIPSSVVSLLQEFEDVFPDEMPHGLPPIRGI 663
Query: 306 EHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDG 365
EH+IDF+PGA IPNRPAYR+NP E +E+QRQVSELL KGYVRES+SPC+VPV+LVPKKDG
Sbjct: 664 EHQIDFVPGASIPNRPAYRSNPDETKELQRQVSELLEKGYVRESMSPCAVPVLLVPKKDG 723
Query: 366 SWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKT 425
+WRMCVDCRAIN IT+KYRHPIPRLDDMLDELHG +F+KIDLKSGYHQIRM GDEWKT
Sbjct: 724 TWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLKSGYHQIRMKEGDEWKT 783
Query: 426 AFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHIT 485
AFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH+LR ++GK VVVYFDDIL+YSK+LDDH+
Sbjct: 784 AFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILRAFIGKCVVVYFDDILIYSKNLDDHVQ 843
Query: 486 HVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVS 545
H+++VL LR E L+ NLKKC+FC + + FLGFVVS+ G+ VD EK++AI++WP+P V
Sbjct: 844 HLKSVLDVLRQEKLFANLKKCTFCTDNLVFLGFVVSAQGLHVDAEKIRAIQEWPSPTTVG 903
Query: 546 EVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLA 605
VRSFHGLASFYRRF+K+FST+ +PL E++KKNV F W +QE AF +K++L++APLL+
Sbjct: 904 NVRSFHGLASFYRRFVKDFSTLVAPLTEVIKKNVGFKWGDEQEKAFQLVKQRLTNAPLLS 963
Query: 606 LPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQT 665
LPNF FEIECDASG+GIGAVLMQ RP+ +FSEKL+GA+L YPTYDKELYALVRAL+T
Sbjct: 964 LPNFAKMFEIECDASGMGIGAVLMQEGRPIAYFSEKLSGAALNYPTYDKELYALVRALET 1023
Query: 666 WQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADAL 725
W+HYLW +EF+IHTDHESLKHL+ Q+KLN+RHA+W+EFIETFPYVI+YKQGKEN+VADAL
Sbjct: 1024 WRHYLWHREFVIHTDHESLKHLKGQHKLNKRHARWMEFIETFPYVIRYKQGKENVVADAL 1083
Query: 726 SRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDN-----YLLLDGFLFR 785
SRRYVLL+TL+A+LLGFE IK+LY D F CE+ + +N Y DGFLFR
Sbjct: 1084 SRRYVLLSTLDAKLLGFEQIKELYATDHDF------CEEYKLSENSANGRYFRHDGFLFR 1143
Query: 786 KGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIAC 845
+ KLC+P+CS+RELLVRE+HGGGLM H G++KT +L EHF+WP M+ D+ ++CGRCI C
Sbjct: 1144 ENKLCVPNCSVRELLVRESHGGGLMGHFGIAKTLAILQEHFYWPHMKRDIERICGRCITC 1203
Query: 846 KQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPC 905
KQAKSR+Q HGLY+PLP+P+ PWIDISMDFVLGLPR+++G DS+FVVVDRFSKMAHFIPC
Sbjct: 1204 KQAKSRVQHHGLYTPLPIPSEPWIDISMDFVLGLPRSKRGKDSVFVVVDRFSKMAHFIPC 1263
Query: 906 HKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQ 965
HKTDDA H+A+LFF+E+VRLHG+P++IVSDRD KFLS+FW+ LWGKLGTKL++STTCHPQ
Sbjct: 1264 HKTDDASHVAELFFKEIVRLHGLPRTIVSDRDAKFLSYFWKTLWGKLGTKLLFSTTCHPQ 1323
Query: 966 TDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVYGFNPL 1025
TDGQTEVVNRT++ +LRAII KN+KTWEDCLP +EFAYNR+VHS TK +PFEIVYGFNPL
Sbjct: 1324 TDGQTEVVNRTLSTLLRAIIKKNIKTWEDCLPHVEFAYNRSVHSATKFSPFEIVYGFNPL 1383
Query: 1026 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGD 1085
TP+DL P+P E VN D K E V ++H++ K IE++ + A + NKGRK V+F+PGD
Sbjct: 1384 TPLDLSPLPLTEHVNLDGKRKAELVKQIHEKAKLNIERRTEQYAKQANKGRKQVVFEPGD 1443
Query: 1086 WVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPF 1145
WVW+H RKERFPTQRKSKLLPRGDGPFQVLERINDNAYK+DLPG+Y VSATFN+ DLSPF
Sbjct: 1444 WVWLHMRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSATFNISDLSPF 1503
Query: 1146 DVGDGLDSRTNPSQEGEND-------MNHDQGISIPQGPITRTRAKKLQQTLYSYIQ--- 1205
VGD LD RTNP QE END + I +P GPITR RAKK Q L IQ
Sbjct: 1504 AVGDELDLRTNPFQEEENDEDMANTRSRNADPIQVPIGPITRARAKKFQNALSGLIQGIW 1563
Query: 1206 AMVSSSKEILEDARDLPYMLCKVEVQE 1216
A S + I D +++ ++ ++VQE
Sbjct: 1564 AQTSKWRPIDGDEQNIQPIISMIQVQE 1576
BLAST of CmoCh10G011290 vs. NCBI nr
Match:
OWM74668.1 (hypothetical protein CDL15_Pgr005248 [Punica granatum])
HSP 1 Score: 1625.9 bits (4209), Expect = 0.0e+00
Identity = 794/1216 (65.30%), Postives = 956/1216 (78.62%), Query Frame = 0
Query: 3 IKEGEIVTDDEAHDDINEETD-ESEEFSEEDPTHISLVTRRALNTHIKEDGLD-QRENLF 62
+ GEI + DE D + E + E + +LV RAL+ KEDG QREN+F
Sbjct: 385 LDNGEIASADEYESDTDSMPSLEDADDVEHAVSGQTLVVLRALHVQAKEDGDGLQRENIF 444
Query: 63 QTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQT 122
TRC V+ C ++ID GS NV S ++V++L L TQ HPRPY+LQWLN+ GE++VT+Q
Sbjct: 445 YTRCHVKDRVCGLIIDGGSTVNVASKLMVEKLGLSTQKHPRPYRLQWLNESGELKVTKQV 504
Query: 123 LVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIPL 182
L+SF+IGKY D+VLCDVV M LLLGRPWQFDRR +DGY NRYSF +GR TL PL
Sbjct: 505 LISFSIGKYHDEVLCDVVPMIASHLLLGRPWQFDRRTTHDGYKNRYSFIKDGRSMTLAPL 564
Query: 183 SPKDVFIDHCKLEKKRQEADAKAE-----IEKES-SEKKSLSEKQESNTQPREK------ 242
P VF + ++++ E+ +++ EKES SE+K + EK E ++ +EK
Sbjct: 565 PPHQVFEEQLQIKRSSAESSKESKRVAEPKEKESKSERKEIREKSEKESEKKEKCESSAL 624
Query: 243 KERKAKSVSLYVTSSEARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHL 302
K ++ K +S + E +V + +++ + K A Y +N N LPS V LLQEF+ +
Sbjct: 625 KRKEGKKLSFFTKERELESVSKDERPMILFLYKEA-YLSNTFNLYLPSVVVSLLQEFDDV 684
Query: 303 FSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESL 362
F E P LPP+RGIEH+IDFIPGAPIPNRPAYR NP+EA+E+Q+QV ELL KGYVRES+
Sbjct: 685 FLEGTPPGLPPIRGIEHQIDFIPGAPIPNRPAYRCNPEEAKELQKQVDELLTKGYVRESM 744
Query: 363 SPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKS 422
SPCSVPV+LVPKKDG+WRMCVDCRA+NKIT+KYR+PIPRLDDMLDELHG ++F+KIDLKS
Sbjct: 745 SPCSVPVLLVPKKDGTWRMCVDCRAVNKITVKYRYPIPRLDDMLDELHGSTIFSKIDLKS 804
Query: 423 GYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYF 482
GYHQIRM GDEWKTAFKTK GLYEWLVMPFGLTNAPSTFMRLMNHVLR Y+GKFVVVYF
Sbjct: 805 GYHQIRMKEGDEWKTAFKTKSGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGKFVVVYF 864
Query: 483 DDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEE 542
DDIL+YSK+ DH+ H+R VL LR+E LY NLKKC F +E V FLGFVVSS GVEVDEE
Sbjct: 865 DDILIYSKTEHDHMNHLRCVLEVLRHEKLYANLKKCEFFLESVVFLGFVVSSKGVEVDEE 924
Query: 543 KVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELA 602
KVKAI++WPTP ++EVRSFHGLA FYRRF++NFST+A+PL E++KK V F W K+QE A
Sbjct: 925 KVKAIREWPTPTTIAEVRSFHGLAGFYRRFVRNFSTVAAPLTEIIKKEVGFRWGKEQENA 984
Query: 603 FNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYP 662
FNTLKEKLSSAPLL LP+F FEIECDASG+GIGAVLMQ +RP+ +FSEKL GA+L Y
Sbjct: 985 FNTLKEKLSSAPLLILPDFSKPFEIECDASGIGIGAVLMQEKRPIAYFSEKLNGAALNYS 1044
Query: 663 TYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYV 722
TYDKELYALVRAL+TWQHYLW KEFIIHTDHESLKHL+ Q+KLNRRH +W+EFIE FPYV
Sbjct: 1045 TYDKELYALVRALETWQHYLWSKEFIIHTDHESLKHLKGQSKLNRRHTRWIEFIEMFPYV 1104
Query: 723 IKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDN 782
I+YK+GKEN+VADALSRRY L++TL+A+LLGFE+IK+LY HD F CEKG D
Sbjct: 1105 IQYKKGKENVVADALSRRYTLISTLDAKLLGFEYIKELYLHDHDFKEVFSECEKGAF-DK 1164
Query: 783 YLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDV 842
+ +G+LFR+ KLCIP S+RELLVREAHGGGLM H GV+KT D+L EHFFWP M+ DV
Sbjct: 1165 FYKHEGYLFRENKLCIPQSSMRELLVREAHGGGLMGHFGVAKTLDVLREHFFWPHMKRDV 1224
Query: 843 HKVCGRCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDR 902
++C RC+ CK+AKS++QPHGLY PLPVP+ PW D+SMDFVLGLPRT+ G DSIFVVVDR
Sbjct: 1225 ERICLRCVTCKKAKSKIQPHGLYMPLPVPSHPWTDVSMDFVLGLPRTKNGKDSIFVVVDR 1284
Query: 903 FSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTK 962
FSKMAHFIPC KTDDA H+A LFF+EVVRLHGIP++IVSDRDVKFLSHFWRVLWGKLGTK
Sbjct: 1285 FSKMAHFIPCKKTDDATHVAGLFFKEVVRLHGIPRTIVSDRDVKFLSHFWRVLWGKLGTK 1344
Query: 963 LVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTP 1022
L++STTCHPQTDGQTEVVNRT+ +LRA+I +N+K+WEDC+PFIEFAYNRA+HS+TK +P
Sbjct: 1345 LLFSTTCHPQTDGQTEVVNRTLGTLLRAVIKRNVKSWEDCIPFIEFAYNRAMHSSTKFSP 1404
Query: 1023 FEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKG 1082
FE+VYGFNPLTP+DL P+P E V+ D K E V K+H++ + I +N + ATR NKG
Sbjct: 1405 FEVVYGFNPLTPLDLTPLPIGEIVSLDGKRKAELVKKIHEEARNHILHKNEQAATRANKG 1464
Query: 1083 RKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSA 1142
RK V F+PGDWVWVHFRKERF +QRKSKL PRGDGPFQVLE+INDNAYK+DLPG+Y VS+
Sbjct: 1465 RKHVTFEPGDWVWVHFRKERFSSQRKSKLNPRGDGPFQVLEKINDNAYKLDLPGEYQVSS 1524
Query: 1143 TFNVVDLSPFDVGDGLDSRTNPSQEGEND-----MNHDQGISIPQGPITRTRAKKLQ--- 1197
TFNV DLSPFDV G DSRTNP +EG ND H+ + I GPITR RAKKL+
Sbjct: 1525 TFNVSDLSPFDV--GADSRTNPFEEGGNDRVEPVSEHEDKLHISTGPITRARAKKLEHAL 1584
BLAST of CmoCh10G011290 vs. NCBI nr
Match:
TYK02449.1 (F15O4.13 [Cucumis melo var. makuwa])
HSP 1 Score: 1598.9 bits (4139), Expect = 0.0e+00
Identity = 771/1205 (63.98%), Postives = 935/1205 (77.59%), Query Frame = 0
Query: 1 MTIKEGEIVTDDEAHDDINE-----ETDESEEFSEEDPTHISLVTRRALNTHIKEDGL-D 60
M ++ G I ++DE ++ + ET +E+ EE + ISL+TRR LN IKE+ + D
Sbjct: 354 MVVRNGVIDSEDECEENDAQLEEEYETPVDDEYIEEG-SSISLITRRVLNVKIKEEKIED 413
Query: 61 QRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEV 120
QRENLF TRCL++ PCS+VID+GSCTNVVSS LVKRL T+PHP+PYKLQWL + GE+
Sbjct: 414 QRENLFHTRCLIKGSPCSLVIDNGSCTNVVSSFLVKRLQRTTRPHPKPYKLQWLTNKGEL 473
Query: 121 RVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRK 180
+V Q L+SFT+G+Y D+VLCDVV MH GD+LLGRPWQ+DR V YDG N+Y+FT +G+K
Sbjct: 474 KVNSQVLISFTLGRYKDEVLCDVVPMHAGDILLGRPWQYDREVTYDGLLNKYTFTLDGKK 533
Query: 181 TTLIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKAK 240
TL+PLSP + F D
Sbjct: 534 FTLLPLSPYEEFND---------------------------------------------- 593
Query: 241 SVSLYVTSSEARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEMP 300
F H E+ P
Sbjct: 594 -------------------------------------------------MFPH---EDAP 653
Query: 301 SSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVP 360
+ LPPLRGIEH+IDFIPGA +PN AYRTNP E +EIQRQV EL+ KGY+RES+SPCSVP
Sbjct: 654 TGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVP 713
Query: 361 VILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIR 420
VILVPKKDG+WRMCVDCRAINKIT+KYRHPIPRLDDMLDELHG +LF+KIDLKSGYHQIR
Sbjct: 714 VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR 773
Query: 421 MHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVY 480
MH+GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNHVL+EY+GKFVVVYFDDILVY
Sbjct: 774 MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILVY 833
Query: 481 SKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIK 540
SK L+DHI HV+ +L LR E LY N KKCSFC+E+++FLGF+V +GV+VDEEKVKAI+
Sbjct: 834 SKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIR 893
Query: 541 DWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKE 600
+WPTP N SEVRSFHGLASFYRRFIK+FS+IASPL ELVKK+V F W++ QE AFN LKE
Sbjct: 894 EWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEWKEKQENAFNELKE 953
Query: 601 KLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEL 660
KL AP LALPNF+ +FEIECDASG+GIGAVLMQ ++P+MFFSEKL GA L Y TYDKEL
Sbjct: 954 KLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSEKLNGAQLNYSTYDKEL 1013
Query: 661 YALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQG 720
+ALVRAL+ WQHYLWPKEF+IHTDHESLKHL+ Q KLN+RHAKW+EFIETFPYVI YK+G
Sbjct: 1014 HALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKWVEFIETFPYVIHYKKG 1073
Query: 721 KENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMF-FAPFVESCEKGLIVDNYLLLD 780
K+N+VADALSRRY L ++L+A++LGF+H+ +LY+ + F C +G V +Y++ D
Sbjct: 1074 KDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVYAQCLEGKNVQDYIVFD 1133
Query: 781 GFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCG 840
G LFRKGKLCIP CSIRELLV+EAHGGGLM H G KTY +L EHF+W KMR DV+KVC
Sbjct: 1134 GMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSILCEHFYWLKMRKDVNKVCK 1193
Query: 841 RCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMA 900
+C CK+AKS+ QPHGLY+PL VPN PW+DISMDFVLGLP+TR+ +DSIFVVVDRFSKMA
Sbjct: 1194 QCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFVVVDRFSKMA 1253
Query: 901 HFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYST 960
HFIPC+KTDDA +IA+LFFREVVRLHGIPK+IVSDRDVKFLSHFW+VLWGKLGTKL++ST
Sbjct: 1254 HFIPCNKTDDATNIANLFFREVVRLHGIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFST 1313
Query: 961 TCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVY 1020
TCHPQTDGQTEVVNRT+ A+LR++I KNLK+WE+ LPF+EFAYNRA+HSTT C+PFE+VY
Sbjct: 1314 TCHPQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVY 1373
Query: 1021 GFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVI 1080
GFNPLTP+DL P+P F + A+++VE++ LHK++KE+IEK+N K+ TR N+GRK +I
Sbjct: 1374 GFNPLTPLDLSPLPPNMFTSDAASSRVEYIKTLHKEIKERIEKKNQKLVTRKNQGRKELI 1433
Query: 1081 FKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVV 1140
FKPGDWVWVH RKERFP QRKSKL +GDGPFQVLERIN+NAYK+DL GKY VS+TFNV
Sbjct: 1434 FKPGDWVWVHLRKERFPDQRKSKLQQQGDGPFQVLERINNNAYKLDLRGKYNVSSTFNVA 1459
Query: 1141 DLSPFDVG-DGLDSRTNPSQEGENDMNH-DQGISIPQGPITRTRAKKLQQTLYSYIQAMV 1197
DL+ FDVG + LD RTNPS+E +D++ + + +P+GPIT+ +AKK+Q+ ++Q +
Sbjct: 1494 DLTLFDVGNEDLDLRTNPSKERGDDVDSLNNLLHVPEGPITKRKAKKIQEAFTLHVQKLA 1459
BLAST of CmoCh10G011290 vs. NCBI nr
Match:
TYK26105.1 (F15O4.13 [Cucumis melo var. makuwa])
HSP 1 Score: 1565.4 bits (4052), Expect = 0.0e+00
Identity = 758/1204 (62.96%), Postives = 919/1204 (76.33%), Query Frame = 0
Query: 1 MTIKEGEIVTDDEAHDDINE-----ETDESEEFSEEDPTHISLVTRRALNTHIKEDGL-D 60
M ++ G I ++DE ++ + ET +E+ EE + ISL+TRR LN IKE+ + D
Sbjct: 354 MVVRNGVIDSEDECEENDAQLEEEYETPVDDEYIEEG-SSISLITRRVLNVKIKEEKIED 413
Query: 61 QRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEV 120
QRENLF TRCL++ PCS+VID+GSCTNVVSS LVKRL T+PHP+PYKLQWL + GE+
Sbjct: 414 QRENLFHTRCLIKGSPCSLVIDNGSCTNVVSSFLVKRLQRTTRPHPKPYKLQWLTNKGEL 473
Query: 121 RVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRK 180
+V Q L+SFT+G+Y D+VLCDVV MH GD+LLGRPWQ+DR V YDG N+Y+FT +G+K
Sbjct: 474 KVNSQVLISFTLGRYKDEVLCDVVPMHAGDILLGRPWQYDREVTYDGLLNKYTFTLDGKK 533
Query: 181 TTLIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKAK 240
TL+PLSP + F D
Sbjct: 534 FTLLPLSPYEEFND---------------------------------------------- 593
Query: 241 SVSLYVTSSEARNVLLSNQTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEMP 300
F H E+ P
Sbjct: 594 -------------------------------------------------MFPH---EDAP 653
Query: 301 SSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVP 360
+ LPPLRGIEH+IDFIPGA +PN AYRTNP E +EIQRQV EL+ KGY+RES+SPCSVP
Sbjct: 654 TGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVP 713
Query: 361 VILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIR 420
VILVPKKDG+WRMCVDCRAINKIT+KYRHPIPRLDDMLDELHG +LF+KIDLKSGYHQIR
Sbjct: 714 VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR 773
Query: 421 MHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVY 480
MH+GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNHVL+EY+GKFVVVYFDDILVY
Sbjct: 774 MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILVY 833
Query: 481 SKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIK 540
SK L+DHI HV+ +L LR E LY N KKCSFC+E+++FLGF+V +GV+VDEEKVKAI+
Sbjct: 834 SKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIR 893
Query: 541 DWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKE 600
+WPTP N SEVRSFHGLASFYRRFIK+FS+IASPL ELVKK+V F W++ QE AFN LKE
Sbjct: 894 EWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEWKEKQENAFNELKE 953
Query: 601 KLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEL 660
KL AP LALPNF+ +FEIECDASG+GIGAVLMQ ++P+MFFSEKL GA L Y TYDKEL
Sbjct: 954 KLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSEKLNGAQLNYSTYDKEL 1013
Query: 661 YALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQG 720
+ALVRAL+ WQHYLWPKEF+IHTDHESLKHL+ Q KLN+RHAKW+EFIETFPYVI YK+G
Sbjct: 1014 HALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKWVEFIETFPYVIHYKKG 1073
Query: 721 KENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMF-FAPFVESCEKGLIVDNYLLLD 780
K+N+VADALSRRY L ++L+A++LGF+H+ +LY+ + F C +G V +Y++ D
Sbjct: 1074 KDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVYAQCLEGKNVQDYIVFD 1133
Query: 781 GFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCG 840
G LFRKGKLCIP CSIRELLV+EAHGGGLM H G KTY +L EHF+W KMR DV+KVC
Sbjct: 1134 GMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSILCEHFYWLKMRKDVNKVCK 1193
Query: 841 RCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMA 900
+C CK+AKS+ QPHGLY+PL VPN PW+DISMDFVLGLP+TR+ +DSIFVVVDRFSKMA
Sbjct: 1194 QCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFVVVDRFSKMA 1253
Query: 901 HFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYST 960
HFIPC+KTDDA +IA+LFFREVVRLHGIPK+IVSDRDVKFLSHFW+VLWGKLGTKL++ST
Sbjct: 1254 HFIPCNKTDDATNIANLFFREVVRLHGIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFST 1313
Query: 961 TCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVY 1020
TCHPQTDGQTEVVNRT+ A+LR++I KNLK+WE+ LPF+EFAYNRA+HSTT C+PFE+VY
Sbjct: 1314 TCHPQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVY 1373
Query: 1021 GFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVI 1080
GFNPLTP+DL P+P F + A+++VE++ LHK++KE+IEK+N K+ TR N+GRK +I
Sbjct: 1374 GFNPLTPLDLSPLPPNMFTSDAASSRVEYIKTLHKEIKERIEKKNQKLVTRKNQGRKELI 1433
Query: 1081 FKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVV 1140
FKPGDWVWVH RKERFP QRKSKL RGDGPFQVLERIN+NAYK+DL G
Sbjct: 1434 FKPGDWVWVHLRKERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRG----------- 1440
Query: 1141 DLSPFDVGDGLDSRTNPSQEGENDMNH-DQGISIPQGPITRTRAKKLQQTLYSYIQAMVS 1197
+ LD RTNPS+E +D++ + + +P+GPIT+ +AKK+Q+ ++Q + +
Sbjct: 1494 -------NEDLDLRTNPSKERGDDVDSLNNLLHVPEGPITKRKAKKIQEAFTLHVQKLAN 1440
BLAST of CmoCh10G011290 vs. NCBI nr
Match:
KAG7588738.1 (Retrotransposon gag domain [Arabidopsis suecica])
HSP 1 Score: 1550.0 bits (4012), Expect = 0.0e+00
Identity = 725/1158 (62.61%), Postives = 900/1158 (77.72%), Query Frame = 0
Query: 24 ESEEFSEEDPTHIS-----------LVTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCS 83
ESEE + PT + LV RR L+ K + +QRENLF TRC VQ CS
Sbjct: 365 ESEEETPNSPTSLEAIEELPAKGELLVARRTLSVQTKSEEQEQRENLFHTRCHVQGKVCS 424
Query: 84 VVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDD 143
++ID GSCTNV S I+VK+L LK + HP+PY LQWLND GE++V Q +V IGKY D+
Sbjct: 425 LIIDGGSCTNVASDIMVKKLGLKVEKHPKPYDLQWLNDSGEMKVKNQVVVPIVIGKYEDE 484
Query: 144 VLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKL 203
+LCDV+ M G +LLGRPWQ DR+VM+DG+ NR+SF + GRKT L+P++P +V++D L
Sbjct: 485 ILCDVLPMEAGHILLGRPWQSDRKVMHDGFTNRHSFEYKGRKTILVPMTPHEVYLDQIHL 544
Query: 204 EKKRQEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKAKSVSLYVTSSEARNVLLSN 263
+KK ++ K + +V + E + L S
Sbjct: 545 KKKDKQV---------------------------------VKHSNFFVKAGEVKKALFSK 604
Query: 264 QTILVLMCKGACYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPG 323
+ +L+ + KGA L P LPS+ LLQ+++ +F E+ P LPP+RGIEH+IDF+PG
Sbjct: 605 EPMLLFVFKGALTSLTNLAPVLPSEMTSLLQDYKDVFPEDNPKGLPPIRGIEHQIDFVPG 664
Query: 324 APIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCR 383
A +PNRPAYRTNP E +E+QRQV EL+ KG++RES+SPC+VPV+LVPKKDGSWRMCVDCR
Sbjct: 665 ASLPNRPAYRTNPLETKELQRQVDELMEKGHIRESMSPCAVPVLLVPKKDGSWRMCVDCR 724
Query: 384 AINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLY 443
AIN IT+KYRHPIPRLDDMLDELHG S+F+KIDLKSGYHQIRM GDEWKTAFKTK+GLY
Sbjct: 725 AINNITVKYRHPIPRLDDMLDELHGSSIFSKIDLKSGYHQIRMKEGDEWKTAFKTKHGLY 784
Query: 444 EWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTL 503
EWLVMPFGLTNAPSTFMRLMNHVLR ++G FVVVYFDDIL+YSKSL HI H+ +VL L
Sbjct: 785 EWLVMPFGLTNAPSTFMRLMNHVLRAFIGIFVVVYFDDILIYSKSLRGHIEHLDSVLNVL 844
Query: 504 RNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLA 563
R E LY NLKKC+FC + + FLGFVVS++GV+VDEEKVKAIKDWP+PK V EVRSFHGLA
Sbjct: 845 RKEELYANLKKCTFCTDNLVFLGFVVSADGVKVDEEKVKAIKDWPSPKTVGEVRSFHGLA 904
Query: 564 SFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFE 623
FYRRF+K+FSTIA+PL E++KK+V F WE+ QE AF +LKEKL++AP+L LP+F TFE
Sbjct: 905 GFYRRFVKDFSTIAAPLTEVIKKDVGFKWEQPQEEAFQSLKEKLTNAPVLILPDFLKTFE 964
Query: 624 IECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKE 683
IECDASG+GIGAVLMQ+Q+P+ FFSEKL GA+L YPTYDKELYALVRALQTWQHYLWPKE
Sbjct: 965 IECDASGIGIGAVLMQDQKPIAFFSEKLGGATLNYPTYDKELYALVRALQTWQHYLWPKE 1024
Query: 684 FIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNT 743
F+IHTDHESLKHL+ Q KLN+RHA+W+EFIETFPYVIKYK+GK+N+VADALSRRY LL+T
Sbjct: 1025 FVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYTLLST 1084
Query: 744 LNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIREL 803
LN +L+GFE IK+LY D F ++CEK +Y DGFLF + +LC+P+CS+R+L
Sbjct: 1085 LNVKLMGFEQIKELYATDHDFQEIYKACEK-YASGHYFRQDGFLFYENRLCVPNCSLRDL 1144
Query: 804 LVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLYS 863
VREAHGGGLM H G++KT +++ EHF WP M+ DV ++CGRC CKQAKS++QP+GLY+
Sbjct: 1145 FVREAHGGGLMGHFGIAKTLEVMKEHFHWPHMKRDVERICGRCTTCKQAKSKVQPNGLYT 1204
Query: 864 PLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFF 923
PLP+P PW DISMDFV+GLPRTR G DSIFVVVDRFSKMAHFI CHKTDDA H+A+LFF
Sbjct: 1205 PLPIPTHPWNDISMDFVMGLPRTRTGNDSIFVVVDRFSKMAHFIACHKTDDALHVANLFF 1264
Query: 924 REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTA 983
+E+VRLHG+P+SIVSDRD KFLS+FW+ LW KLGTKL++STTCHPQTDGQTEVVNRT+
Sbjct: 1265 KEIVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLGT 1324
Query: 984 MLRAIIDKNLKTWEDCLPFIEFAYNRAVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFV 1043
+LRA+I KNLKTWE+CLP +EFAYN AVHS +K +PF+IVYGFNP++P+DL+P+P E V
Sbjct: 1325 LLRALIKKNLKTWEECLPHVEFAYNHAVHSASKYSPFQIVYGFNPISPLDLIPLPLSERV 1384
Query: 1044 NFDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQ 1103
+ D K E V ++H+ + IE++ A + NKGR+ IF+ GD VW+H RKERFPTQ
Sbjct: 1385 SLDGKKKAELVQQIHENARRNIEEKTKLYAKQANKGRREQIFEVGDKVWIHLRKERFPTQ 1444
Query: 1104 RKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPFDVGDGLDSRTNPSQ 1163
RKSKL+PR DGPF++++RI+DNAY++DL GKY VS++FNV DL P+ + D D R+NP Q
Sbjct: 1445 RKSKLMPRIDGPFKIVKRISDNAYQLDLQGKYNVSSSFNVSDLVPY-IADQTDLRSNPFQ 1487
Query: 1164 EGENDMNHDQGISIPQGP 1171
EG +DM D + P
Sbjct: 1505 EGGDDMIMDSTKDVEHEP 1487
BLAST of CmoCh10G011290 vs. TAIR 10
Match:
ATMG00860.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 106.7 bits (265), Expect = 1.4e-22
Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 0
Query: 482 ITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLG--FVVSSNGVEVDEEKVKAIKDWPTP 541
+ H+ VL Y N KKC+F ++ +LG ++S GV D K++A+ WP P
Sbjct: 1 MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60
Query: 542 KNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSA 601
KN +E+R F GL +YRRF+KN+ I PL EL+KKN S W + LAF LK +++
Sbjct: 61 KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTL 120
Query: 602 PLLALPNFESTF 612
P+LALP+ + F
Sbjct: 121 PVLALPDLKLPF 131
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q99315 | 5.9e-164 | 37.79 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Q7LHG5 | 2.2e-163 | 38.11 | Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
P0CT41 | 5.5e-146 | 34.00 | Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
P0CT34 | 5.5e-146 | 34.00 | Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
P0CT35 | 5.5e-146 | 34.00 | Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
Match Name | E-value | Identity | Description | |
A0A2N9HBD3 | 0.0e+00 | 67.30 | Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12373 PE=4 SV=1 | [more] |
A0A2N9GY98 | 0.0e+00 | 67.14 | Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35149 PE=4 SV=1 | [more] |
A0A2N9G0F9 | 0.0e+00 | 67.22 | Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20920 PE=4 SV=1 | [more] |
A0A2N9ENW8 | 0.0e+00 | 67.22 | Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8418 PE=4 SV=1 | [more] |
A0A2N9F7E8 | 0.0e+00 | 67.14 | Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10964 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
ATMG00860.1 | 1.4e-22 | 40.91 | DNA/RNA polymerases superfamily protein | [more] |