CmoCh10G011280 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G011280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ribosomal protein S7
Location	Cmo_Chr10: 9255826 .. 9256215 (-)
RNA-Seq Expression	CmoCh10G011280
Synteny	CmoCh10G011280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAAGGTAAAAGAACGAGAGTTCATGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGTGATGTAATCAAATTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTCTTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTTATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCAAAGTTTCGCGCATTTCAGATGGTGGTAA

mRNA sequence

ATGAAAGAAGGTAAAAGAACGAGAGTTCATGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGTGATGTAATCAAATTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTCTTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTTATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCAAAGTTTCGCGCATTTCAGATGGTGGTAA

Coding sequence (CDS)

ATGAAAGAAGGTAAAAGAACGAGAGTTCATGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGTGATGTAATCAAATTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTCTTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTTATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCAAAGTTTCGCGCATTTCAGATGGTGGTAA

Protein sequence

MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTNQSFAHFRWW

Homology

[Close]

BLAST of CmoCh10G011280 vs. ExPASy Swiss-Prot
Match: P92557 (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-61
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPA+TERDVIKLMVDAV+NIKPICEV KVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVAKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AY+KRG AR+KRENLH LASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQKRGSARRKRENLHGLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. ExPASy Swiss-Prot
Match: Q01902 (Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-58
Identity = 114/129 (88.37%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           M +GKRTRV AIVY+TFHR A+TERDVIKLMVDAVDNIKPICEV KVGVAGT+YDVPGIV
Sbjct: 20  MIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPICEVVKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWIL AAFKRRISYRISLEKCSFAEIL AYRKRGI+R++RENLH LASTN
Sbjct: 80  ARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYRKRGISRKRRENLHGLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. ExPASy Swiss-Prot
Match: Q9MF82 (Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 2.5e-57
Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRT+V AIVYQTFHR A+TE DVIKLM+DAV+NIKPIC+VEKV VAGT+YDVPGIV
Sbjct: 20  MKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPICKVEKVRVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKC F EIL AYRKRGI+R+KRENLH LAS N
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYRKRGISRKKRENLHGLASAN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. ExPASy Swiss-Prot
Match: P26867 (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=3 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-36
Identity = 77/130 (59.23%), Postives = 106/130 (81.54%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           M +GK+TR  AIVY+TFHR A    DVIKL+V+A++N+KPICEV+KV ++GT   VP I+
Sbjct: 102 MIDGKKTRSRAIVYKTFHRLA-PHGDVIKLLVNAIENVKPICEVKKVRISGTTRLVPSII 161

Query: 61  ARDRQQTLAIRWILEAAFKRRISYR-ISLEKCSFAEILYAYRKRGIARQKRENLHRLAST 120
           A +RQ+TLAIRW+LE+A KRR+  + ISL++C +AEIL A +K GIAR+KR++LH+LA  
Sbjct: 162 ATNRQETLAIRWMLESAAKRRMGKKSISLDQCLYAEILEASQKMGIARKKRDDLHKLAEA 221

Query: 121 NQSFAHFRWW 130
           N+SF+H+RWW
Sbjct: 222 NRSFSHYRWW 230

[Close]

BLAST of CmoCh10G011280 vs. ExPASy Swiss-Prot
Match: Q2W2I7 (30S ribosomal protein S7 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rpsG PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-18
Identity = 52/129 (40.31%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHR-PAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGI 60
           M +GK++   AIVY    +  A+T +D +K+  +A+DN+KP  EV    V G  Y VP  
Sbjct: 31  MLDGKKSAAEAIVYGALDKIQAKTGQDPLKVFHEALDNVKPALEVRSRRVGGATYQVPVE 90

Query: 61  VARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLAST 120
           V  DR+Q LAIRW+++  + R+ S    +++ S  E+L A   RG A +KRE+ HR+A  
Sbjct: 91  VRSDRRQALAIRWLID--YSRKRSETTMIDRLS-GELLDAANNRGAAVKKREDTHRMAEA 150

Query: 121 NQSFAHFRW 129
           N++F+H+RW
Sbjct: 151 NKAFSHYRW 156

[Close]

BLAST of CmoCh10G011280 vs. ExPASy TrEMBL
Match: A0A6B9MKJ0 (Ribosomal protein S7 OS=Hemiptelea davidii OX=63068 GN=rps7 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KREN+HRLASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENIHRLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. ExPASy TrEMBL
Match: A0A142BZ01 (Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-62
Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KRENLHRLASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHRLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. ExPASy TrEMBL
Match: A0A7D6C7C9 (Ribosomal protein S7 OS=Luffa acutangula OX=56866 GN=rps7 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-62
Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KRENLHRLASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHRLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. ExPASy TrEMBL
Match: A0A411GRV8 (Ribosomal protein S7 OS=Morus notabilis OX=981085 GN=rps7 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-62
Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KRENLHRLASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHRLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. ExPASy TrEMBL
Match: A0A0M4R6T5 (Ribosomal protein S7 OS=Cannabis sativa OX=3483 GN=rps7 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KRENLHRLASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHRLASTN 139

Query: 121 QSFAHFRWW 130
           + FAHFRWW
Sbjct: 140 RRFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. NCBI nr
Match: XP_023521058.1 (uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.1 bits (640), Expect = 5.0e-63
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV
Sbjct: 57  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 116

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIARQKRENLHRLASTN
Sbjct: 117 ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN 176

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 177 RSFAHFRWW 185

[Close]

BLAST of CmoCh10G011280 vs. NCBI nr
Match: QHD19691.1 (ribosomal protein S7 [Hemiptelea davidii])

HSP 1 Score: 248.1 bits (632), Expect = 4.3e-62
Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KREN+HRLASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENIHRLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. NCBI nr
Match: YP_009241662.1 (ribosomal protein S7 [Ziziphus jujuba] >YP_009565404.1 ribosomal protein S7 [Morus notabilis] >YP_009913635.1 ribosomal protein S7 [Luffa acutangula] >QWQ49870.1 ribosomal protein S7 [Zelkova schneideriana] >AMP43645.1 ribosomal protein S7 [Ziziphus jujuba] >QBB08761.1 ribosomal protein S7 [Morus notabilis] >QLJ93024.1 ribosomal protein S7 [Luffa acutangula])

HSP 1 Score: 247.3 bits (630), Expect = 7.3e-62
Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KRENLHRLASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHRLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. NCBI nr
Match: WP_131796637.1 (30S ribosomal protein S7 [Candidatus Frankia datiscae])

HSP 1 Score: 246.9 bits (629), Expect = 9.5e-62
Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGTLYDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTLYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KRENLH+LASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHKLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. NCBI nr
Match: KAF3452152.1 (hypothetical protein FNV43_RR08250 [Rhamnella rubrinervis])

HSP 1 Score: 245.4 bits (625), Expect = 2.8e-61
Identity = 121/129 (93.80%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPAQTERDVI+LMVDA++NIKPICEVEKVGVAGT+YDVPGIV
Sbjct: 1   MKEGKRTRVRAIVYQTFHRPAQTERDVIQLMVDAIENIKPICEVEKVGVAGTIYDVPGIV 60

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AYRKRGIAR+KRENLHRLASTN
Sbjct: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHRLASTN 120

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 121 RSFAHFRWW 129

[Close]

BLAST of CmoCh10G011280 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 236.9 bits (603), Expect = 9.2e-63
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPA+TERDVIKLMVDAV+NIKPICEV KVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVAKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AY+KRG AR+KRENLH LASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQKRGSARRKRENLHGLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 )

HSP 1 Score: 236.9 bits (603), Expect = 9.2e-63
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGIV 60
           MKEGKRTRV AIVYQTFHRPA+TERDVIKLMVDAV+NIKPICEV KVGVAGT+YDVPGIV
Sbjct: 20  MKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVAKVGVAGTIYDVPGIV 79

Query: 61  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRLASTN 120
           ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL AY+KRG AR+KRENLH LASTN
Sbjct: 80  ARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQKRGSARRKRENLHGLASTN 139

Query: 121 QSFAHFRWW 130
           +SFAHFRWW
Sbjct: 140 RSFAHFRWW 148

[Close]

BLAST of CmoCh10G011280 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-11
Identity = 40/131 (30.53%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQ-TERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGI 60
           +K GK++  + I+Y+   +  Q TE + + ++  A+  + P   V+   V G+ + VP  
Sbjct: 31  LKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIE 90

Query: 61  VARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRL 120
           +   + + LAIRW+L A+ K   R +++++S      +E++ A +  G A +K+E  HR+
Sbjct: 91  IGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKEETHRM 150

Query: 121 ASTNQSFAHFR 128
           A  N++FAHFR
Sbjct: 151 AEANRAFAHFR 155

[Close]

BLAST of CmoCh10G011280 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-11
Identity = 40/131 (30.53%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 1   MKEGKRTRVHAIVYQTFHRPAQ-TERDVIKLMVDAVDNIKPICEVEKVGVAGTLYDVPGI 60
           +K GK++  + I+Y+   +  Q TE + + ++  A+  + P   V+   V G+ + VP  
Sbjct: 31  LKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIE 90

Query: 61  VARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILYAYRKRGIARQKRENLHRL 120
           +   + + LAIRW+L A+ K   R +++++S      +E++ A +  G A +K+E  HR+
Sbjct: 91  IGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKEETHRM 150

Query: 121 ASTNQSFAHFR 128
           A  N++FAHFR
Sbjct: 151 AEANRAFAHFR 155

The following BLAST results are available for this feature:

BLAST of CmoCh10G011280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92557	1.3e-61	91.47	Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1...	[more]
Q01902	1.0e-58	88.37	Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV...	[more]
Q9MF82	2.5e-57	86.05	Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2	[more]
P26867	1.4e-36	59.23	Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=...	[more]
Q2W2I7	1.4e-18	40.31	30S ribosomal protein S7 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700...	[more]

BLAST of CmoCh10G011280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6B9MKJ0	2.1e-62	95.35	Ribosomal protein S7 OS=Hemiptelea davidii OX=63068 GN=rps7 PE=3 SV=1	[more]
A0A142BZ01	3.5e-62	95.35	Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=3 SV=1	[more]
A0A7D6C7C9	3.5e-62	95.35	Ribosomal protein S7 OS=Luffa acutangula OX=56866 GN=rps7 PE=3 SV=1	[more]
A0A411GRV8	3.5e-62	95.35	Ribosomal protein S7 OS=Morus notabilis OX=981085 GN=rps7 PE=3 SV=1	[more]
A0A0M4R6T5	1.3e-61	94.57	Ribosomal protein S7 OS=Cannabis sativa OX=3483 GN=rps7 PE=3 SV=1	[more]

BLAST of CmoCh10G011280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521058.1	5.0e-63	97.67	uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo]	[more]
QHD19691.1	4.3e-62	95.35	ribosomal protein S7 [Hemiptelea davidii]	[more]
YP_009241662.1	7.3e-62	95.35	ribosomal protein S7 [Ziziphus jujuba] >YP_009565404.1 ribosomal protein S7 [Mor...	[more]
WP_131796637.1	9.5e-62	95.35	30S ribosomal protein S7 [Candidatus Frankia datiscae]	[more]
KAF3452152.1	2.8e-61	93.80	hypothetical protein FNV43_RR08250 [Rhamnella rubrinervis]	[more]

BLAST of CmoCh10G011280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07696.1	9.2e-63	91.47	Ribosomal protein S7p/S5e family protein	[more]
ATMG01270.1	9.2e-63	91.47	mitochondrial ribosomal protein S7	[more]
ATCG01240.1	2.8e-11	30.53	ribosomal protein S7	[more]
ATCG00900.1	2.8e-11	30.53	Ribosomal protein S7p/S5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 1..121 e-value: 1.8E-26 score: 92.6
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 1..128 e-value: 3.4E-35 score: 122.9
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 1..128
IPR000235	Ribosomal protein S5/S7	PIRSF	PIRSF002122	RPS7p_RPS7a_RPS5e_RPS7o	coord: 1..129 e-value: 5.2E-39 score: 132.2
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 1..129
None	No IPR available	PANTHER	PTHR11205:SF46	RIBOSOMAL PROTEIN S7	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G011280.1	CmoCh10G011280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome