CmoCh10G011030 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G011030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Location	Cmo_Chr10: 6373599 .. 6377084 (+)
RNA-Seq Expression	CmoCh10G011030
Synteny	CmoCh10G011030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCCAGGAGGTACTAAGATGTACCAAGATTTAAAACAACACTTTTGGTGGAAGAGCATGAAGAGGGATGTGGCCGGGTTTGTGAGCAAGTGCTTAGTTTGTCAACAAGTGAAAGCTCCAAGACAAAAAACGGCGGGGTTGTTGCAGCCCCTAAGCATACCAGAGTGGAAGTGGGAAAACATAGCGATGGACTTCATAGTAGGTTTACCCAAAACGCCCAAGGGCTATATAGTGATCTGGGTAGTTGTCGATAGGTTGACCAAGTCGGCACACTTTCTACCTGGGAAGGTTACATATACAGTTGACAATTGGGCACAACTGTACGTGAAAGAAATAGTAAGACTACATGGAGTCCCAGTGTCTATAGTGTCGGATCGGGATCCACGCTTTACGTCAGCGTTTTGGCGCGGACTTCAAAAAGCACTGGGTACCCGCCTCGACTTTAGTACCGCCTTTCACCCCCAAACAGATGGACAAACGGAGCATTTAAACCAAATTCTAGAGGACATGCTACGCGCTTGCGTACTAGATTTTAAGGAAAGTTGGGATTCCAAACTACACCTAATGGAATTCTCGTATAACAACAGTTTCCAAGCAACTATTGGAATGGCACCGTTTGAGGCCCTGTACGGGAAACGGTGTAGGTCCCCACTATGTTGGGACGAGGTAGGAGAGAAAGAATTAGTAGGACCCGAGTTGGTTCGACTCACCAATGAGGCTGTCCAGAAAATTCGAGCGAGGATGCGTACCGCTCAAAGTAGACAGAAAAGCTACGCCGATGTAAGGCGTAAAAGCCTGGAGTTTGAGGTGGGGGACCCAGTATTCCTCAAGGTGGCACCTATGAAAGGTGTGTTAAGATACGGACATAAGGGCAAGTTAAGTCCTAAATTCATTGGACCATTCGAGATCCTAGAGCGGGTTGGTCCGGTAGCGTATAAGTTAGCCTTACCTCCAGCCCTCTCAGGAGTACATGACGTATTTCATGTGTCGATGTTGAGGAAGTACATTACGGATCCTATCCACGTAATAGACTACGAACCACTCAAACTCAATGAAGATCTGAGCTACGAGGAAAAATCAGTAAGAATCTTAGCTAGAGAAGTAAAAACCTTACGCAACAGGAGTATTGCGTTCATTAAGGTACTGTGGCGGAATCACCACAGTGAGGAAGCCACGTGGGAGCGTGAGGACGAGATAAGAGAGAAATACCCCGAGTTGGTACAAGAGTTTGAGACTTTCAAGGACGAAAGTTATTTTTAGGGGTAGATAATGTAACGACCCGGGAAAGAAAGAAAGAAAAAGAAAATATATATATAAATNNNNNNNNNNAAAAAAAAAAAAAAAAAACCCAGTCGCCGAAAAACCCGCGAGTTTTCTGGCGACCGCCGAGTTTCGCGAAACGACGGCCACAGCACGCCCACCCTCAGCCCAGCATCTTCAGAACACCTACAAAGGGAGAAAAGAGAGAAAATTTGGAGAGAGAGAGAGAGAGATTTCGGACAAACGTCGGCGAGTGTTCAGTTTCTCCGACGAGCCCTCAAACCACCCTTAAACCGACACCAAACGACCTGTTACTACCGTAAGAGAGATCCCTAACGAAAGCACAATAACTCAGGGTGCATTTTGTGTTATTTCGTAAGCATCGTCGTCGGTAACCGAGGTCGGAAAGTTAGGTTTCTTAATCGATTCTTAGATCTATGGCTTTTAGGAGCTTTTAGGCCGCAAAACTCCCAAAAAGGAAAGAAGGACGACGAACAAAGAGGAAAAGGGAAGGAAGAGGACCGAAATCGGCAACGGAAACGCCGCGGGAAGGAGAGAGAAAACTCGCCAGAAAATCGGCCAAAGTCGAGTAAGGAAGACGAGATCCACGGATCCGGGTCAACCCGAACCCAGAACCCGGGAAAGCCAGCCCGTTCCTCCCTTGGCCTCTGCCTTCGGCCCAGCCCAACTACAGCGGCCCAAACCTCAAACCGGCCCAGAAGCTACGGTTCAGTTGAACCAACCCAGACTAGACCCACGGTCCAATTGAACCGGCCTGCAAACCAAACACTTGCGGCCCAGGCCAGTAAGCCGAGGCCCAACGTTTAGCCTTGGCCCAGTAGCCTTCCACAGCCCGCGACCCGAACCACCACCCGAACCGGACTGCGACCCGCGCTTCGACCCGACACTACCGCCCGACGTGGCTTTCTCTGTTGCTGCCACGTGTCACACAGCGGCGCGGTAGTCCTCGGCTCGGCTCGGCGCAAACGGCTCAGGCTCCCTCCGGTGACGCTCCGGCGGCTCCTTCGGCGGCTCCAGCGGCTGTTCGGCTCGGCTCACCTGTTTTCAGCCCGGTTTCCACTGTTTCGACCCTCCCGAATCTGTTTTCGGCCCCAATTAAGGTATCCGAGGCCATTTTAGAGCCGTATTTCAGATTTATTAAATTAGGTAAATTAATTGTGAAATACTAACGGAAAGTGGTGAACGGTGTGATAGGAAACAAACCCCAGCGAAGTAGGAAGCAGCTCTCACGGAACGGGAGCTTACGTTTAGCTATTTAGGGAGTACTTCGGCCGAGGCCAACCAAGTAAGTGACCTTACTATATGATAGGCTAAAAATTGTATGAGTTACAATATTGTATGAACTATGTCGTACGATGCGGTATATGAGTTATGATGATGTGTGGGTCATAATACCTGATGATGTACTCAGTATATATATATATTTTGATGAATGTCGTACTTGATATGTTTGATGCACTTTGTGGCAATATGATGAGTATGATGATTGCGTGATGTTTACCTTAATATGATGATGTTTTCCATATTGAGCATGTTATATGATGATGAGTGCCATATTGCATCATGTCGTTAGATCGACATAGGACACAACCCTAAGAGCGTGAAAATGATATTAATATAAATATCCACGAGTATGTGTTACCTAGAGTAACAAAGAGATGAGACTAGAGGGTTGCGTCAGAAGAGACATTATGATGGATTTAGAGGGACCTCATGCATATTGTATGTTCATAAGCATAGGGCTACTTCCCCTAGAGATGATGAGTGCGGACGCGCACCGTATGATGAGCGCGTATGCGCACAGGTGTGAAAGCACACAGATGAGGGTGTTCATGAGGTGCATGACACTATGGGGTTCCGCTGACCTCCGGACGTCGCTACAGATTAGCTTGACCAGAGGGTCCAGGGGGTGTGCGAGCGCCCTGGGGATTCACACTCGCACGTGTGAGTCGTGTGTAGGGAAGTACTACACATCCAATTTGTCCGAGACTGGAGGCCACCCCTAAGATGATTAGAGATAGGTCCCTAAATCATGATTGCATGTGTTTGCATTTGCATGGCCCCCTATAGTGGAGCCACTTACTGAGTATTCTTTGAAATACTCAGGCCGTGTGCCACATCATTTTTCAGGTAAAGGCGAGGCGCACTTGTACAGAAGACGGCGGCATCGCGAGCAGAGACTGTGGCACGTGCATAGGGTAG

mRNA sequence

ATGCATCCAGGAGGTACTAAGATGTACCAAGATTTAAAACAACACTTTTGGTGGAAGAGCATGAAGAGGGATGTGGCCGGGTTTGTGAGCAAGTGCTTAGTTTGTCAACAAGTGAAAGCTCCAAGACAAAAAACGGCGGGGTTGTTGCAGCCCCTAAGCATACCAGAGTGGAAGTGGGAAAACATAGCGATGGACTTCATAGTAGGTTTACCCAAAACGCCCAAGGGCTATATAGTGATCTGGGTAGTTGTCGATAGGTTGACCAAGTCGGCACACTTTCTACCTGGGAAGGTTACATATACAGTTGACAATTGGGCACAACTGTACGTGAAAGAAATAGTAAGACTACATGGAGTCCCAGTGTCTATAGTGTCGGATCGGGATCCACGCTTTACGTCAGCGTTTTGGCGCGGACTTCAAAAAGCACTGGGTACCCGCCTCGACTTTAGTACCGCCTTTCACCCCCAAACAGATGGACAAACGGAGCATTTAAACCAAATTCTAGAGGACATGCTACGCGCTTGCGTACTAGATTTTAAGGAAAGTTGGGATTCCAAACTACACCTAATGGAATTCTCGTATAACAACAGTTTCCAAGCAACTATTGGAATGGCACCGTTTGAGGCCCTGTACGGGAAACGGTGTAGGTCCCCACTATGTTGGGACGAGGTAGGAGAGAAAGAATTAGTAGGACCCGAGTTGGTTCGACTCACCAATGAGGCTGTCCAGAAAATTCGAGCGAGGATGCGTACCGCTCAAAGTAGACAGAAAAGCTACGCCGATGTAAGGCGTAAAAGCCTGGAGTTTGAGGTGGGGGACCCAGTATTCCTCAAGGTGGCACCTATGAAAGGTGTGTTAAGATACGGACATAAGGGCAAGTTAAGTCCTAAATTCATTGGACCATTCGAGATCCTAGAGCGGGTTGGTCCGGTAGCGTATAAGTTAGCCTTACCTCCAGCCCTCTCAGGAGTACATGACGTATTTCATGTGTCGATGTTGAGGAAGTACATTACGGATCCTATCCACGTAATAGACTACGAACCACTCAAACTCAATGAAGATCTGAGCTACGAGGAAAAATCAGTAAGAATCTTAGCTAGAGAAGTAAAAACCTTACGCAACAGGAGTATTGCGTTCATTAAGGAGCTTTTAGGCCGCAAAACTCCCAAAAAGGAAAGAAGGACGACGAACAAAGAGGAAAAGGGAAGGAAGAGGACCGAAATCGGCAACGGAAACGCCGCGGGAAGGAGAGAGAAAACTCGCCAGAAAATCGGCCAAAGTCGACCTTCCACAGCCCGCGACCCGAACCACCACCCGAACCGGACTGCGACCCGCGCTTCGACCCGACACTACCGCCCGACGTGGCTTTCTCTGTTGCTGCCACGTGTCACACAGCGGCGCGGTAGTCCTCGGCTCGGCTCGGCGCAAACGGCTCAGGCTCCCTCCGGTGACGCTCCGGCGGCTCCTTCGGCGGCTCCAGCGGCTGTTCGGCTCGGCTCACCTGTTTTCAGCCCGGTTTCCACTGTTTCGACCCTCCCGAATCTGTTTTCGGCCCCAATTAAGGCCGTGTGCCACATCATTTTTCAGGTAAAGGCGAGGCGCACTTGTACAGAAGACGGCGGCATCGCGAGCAGAGACTGTGGCACGTGCATAGGGTAG

Coding sequence (CDS)

ATGCATCCAGGAGGTACTAAGATGTACCAAGATTTAAAACAACACTTTTGGTGGAAGAGCATGAAGAGGGATGTGGCCGGGTTTGTGAGCAAGTGCTTAGTTTGTCAACAAGTGAAAGCTCCAAGACAAAAAACGGCGGGGTTGTTGCAGCCCCTAAGCATACCAGAGTGGAAGTGGGAAAACATAGCGATGGACTTCATAGTAGGTTTACCCAAAACGCCCAAGGGCTATATAGTGATCTGGGTAGTTGTCGATAGGTTGACCAAGTCGGCACACTTTCTACCTGGGAAGGTTACATATACAGTTGACAATTGGGCACAACTGTACGTGAAAGAAATAGTAAGACTACATGGAGTCCCAGTGTCTATAGTGTCGGATCGGGATCCACGCTTTACGTCAGCGTTTTGGCGCGGACTTCAAAAAGCACTGGGTACCCGCCTCGACTTTAGTACCGCCTTTCACCCCCAAACAGATGGACAAACGGAGCATTTAAACCAAATTCTAGAGGACATGCTACGCGCTTGCGTACTAGATTTTAAGGAAAGTTGGGATTCCAAACTACACCTAATGGAATTCTCGTATAACAACAGTTTCCAAGCAACTATTGGAATGGCACCGTTTGAGGCCCTGTACGGGAAACGGTGTAGGTCCCCACTATGTTGGGACGAGGTAGGAGAGAAAGAATTAGTAGGACCCGAGTTGGTTCGACTCACCAATGAGGCTGTCCAGAAAATTCGAGCGAGGATGCGTACCGCTCAAAGTAGACAGAAAAGCTACGCCGATGTAAGGCGTAAAAGCCTGGAGTTTGAGGTGGGGGACCCAGTATTCCTCAAGGTGGCACCTATGAAAGGTGTGTTAAGATACGGACATAAGGGCAAGTTAAGTCCTAAATTCATTGGACCATTCGAGATCCTAGAGCGGGTTGGTCCGGTAGCGTATAAGTTAGCCTTACCTCCAGCCCTCTCAGGAGTACATGACGTATTTCATGTGTCGATGTTGAGGAAGTACATTACGGATCCTATCCACGTAATAGACTACGAACCACTCAAACTCAATGAAGATCTGAGCTACGAGGAAAAATCAGTAAGAATCTTAGCTAGAGAAGTAAAAACCTTACGCAACAGGAGTATTGCGTTCATTAAGGAGCTTTTAGGCCGCAAAACTCCCAAAAAGGAAAGAAGGACGACGAACAAAGAGGAAAAGGGAAGGAAGAGGACCGAAATCGGCAACGGAAACGCCGCGGGAAGGAGAGAGAAAACTCGCCAGAAAATCGGCCAAAGTCGACCTTCCACAGCCCGCGACCCGAACCACCACCCGAACCGGACTGCGACCCGCGCTTCGACCCGACACTACCGCCCGACGTGGCTTTCTCTGTTGCTGCCACGTGTCACACAGCGGCGCGGTAGTCCTCGGCTCGGCTCGGCGCAAACGGCTCAGGCTCCCTCCGGTGACGCTCCGGCGGCTCCTTCGGCGGCTCCAGCGGCTGTTCGGCTCGGCTCACCTGTTTTCAGCCCGGTTTCCACTGTTTCGACCCTCCCGAATCTGTTTTCGGCCCCAATTAAGGCCGTGTGCCACATCATTTTTCAGGTAAAGGCGAGGCGCACTTGTACAGAAGACGGCGGCATCGCGAGCAGAGACTGTGGCACGTGCATAGGGTAG

Protein sequence

MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEKSVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKRTEIGNGNAAGRREKTRQKIGQSRPSTARDPNHHPNRTATRASTRHYRPTWLSLLLPRVTQRRGSPRLGSAQTAQAPSGDAPAAPSAAPAAVRLGSPVFSPVSTVSTLPNLFSAPIKAVCHIIFQVKARRTCTEDGGIASRDCGTCIG

Homology

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BLAST of CmoCh10G011030 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.5e-47
Identity = 111/340 (32.65%), Postives = 177/340 (52.06%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            +++MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
              I++D D  FTS  W+         + FS  + PQTDGQTE  NQ +E +LR       
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTN 240
             +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAVQKIRARMRTAQSRQKSYADVRRKSL-EFEVGDPVFLKVAPMKGVLRYGHK-GKLSPK 300
            +  Q ++  + T   + K Y D++ + + EF+ GD V +K    +    + HK  KL+P 
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPS 1225

Query: 301  FIGPFEILERVGPVAYKLALPPALSGV-HDVFHVSMLRKY 337
            F GPF +L++ GP  Y+L LP ++  +    FHVS L KY
Sbjct: 1226 FAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of CmoCh10G011030 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.5e-47
Identity = 111/340 (32.65%), Postives = 177/340 (52.06%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            +++MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
              I++D D  FTS  W+         + FS  + PQTDGQTE  NQ +E +LR       
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTN 240
             +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAVQKIRARMRTAQSRQKSYADVRRKSL-EFEVGDPVFLKVAPMKGVLRYGHK-GKLSPK 300
            +  Q ++  + T   + K Y D++ + + EF+ GD V +K    +    + HK  KL+P 
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPS 1225

Query: 301  FIGPFEILERVGPVAYKLALPPALSGV-HDVFHVSMLRKY 337
            F GPF +L++ GP  Y+L LP ++  +    FHVS L KY
Sbjct: 1226 FAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of CmoCh10G011030 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.5e-47
Identity = 111/340 (32.65%), Postives = 177/340 (52.06%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            +++MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
              I++D D  FTS  W+         + FS  + PQTDGQTE  NQ +E +LR       
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTN 240
             +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAVQKIRARMRTAQSRQKSYADVRRKSL-EFEVGDPVFLKVAPMKGVLRYGHK-GKLSPK 300
            +  Q ++  + T   + K Y D++ + + EF+ GD V +K    +    + HK  KL+P 
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPS 1225

Query: 301  FIGPFEILERVGPVAYKLALPPALSGV-HDVFHVSMLRKY 337
            F GPF +L++ GP  Y+L LP ++  +    FHVS L KY
Sbjct: 1226 FAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of CmoCh10G011030 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.5e-47
Identity = 111/340 (32.65%), Postives = 177/340 (52.06%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            +++MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
              I++D D  FTS  W+         + FS  + PQTDGQTE  NQ +E +LR       
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTN 240
             +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAVQKIRARMRTAQSRQKSYADVRRKSL-EFEVGDPVFLKVAPMKGVLRYGHK-GKLSPK 300
            +  Q ++  + T   + K Y D++ + + EF+ GD V +K    +    + HK  KL+P 
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPS 1225

Query: 301  FIGPFEILERVGPVAYKLALPPALSGV-HDVFHVSMLRKY 337
            F GPF +L++ GP  Y+L LP ++  +    FHVS L KY
Sbjct: 1226 FAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of CmoCh10G011030 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.5e-47
Identity = 111/340 (32.65%), Postives = 177/340 (52.06%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            +++MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
              I++D D  FTS  W+         + FS  + PQTDGQTE  NQ +E +LR       
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTN 240
             +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAVQKIRARMRTAQSRQKSYADVRRKSL-EFEVGDPVFLKVAPMKGVLRYGHK-GKLSPK 300
            +  Q ++  + T   + K Y D++ + + EF+ GD V +K    +    + HK  KL+P 
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPS 1225

Query: 301  FIGPFEILERVGPVAYKLALPPALSGV-HDVFHVSMLRKY 337
            F GPF +L++ GP  Y+L LP ++  +    FHVS L KY
Sbjct: 1226 FAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of CmoCh10G011030 vs. ExPASy TrEMBL
Match: A0A6J1EYH9 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111440131 PE=4 SV=1)

HSP 1 Score: 664.8 bits (1714), Expect = 3.0e-187
Identity = 337/408 (82.60%), Postives = 346/408 (84.80%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQ+VKAPRQKTAGLLQPLSIPEWKWE
Sbjct: 1421 MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWE 1480

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            NI MDFIVGLPKTPKGY VIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGV 
Sbjct: 1481 NIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVL 1540

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
            VSIVSDRDPRFT AFWRGLQKALGTRLDFSTAFHPQ DGQTE LNQILEDMLRACVLDFK
Sbjct: 1541 VSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLRACVLDFK 1600

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
            ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE
Sbjct: 1601 ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 1660

Query: 241  AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
            AVQ IRARMRT QSRQKSYADVRRKSLEFEVGDP+FLKVAPMKGVLR+GHKGKLSPKFIG
Sbjct: 1661 AVQIIRARMRTDQSRQKSYADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIG 1720

Query: 301  PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
            PFEILERVGPVAYKLALPPALSGVHDV HV                              
Sbjct: 1721 PFEILERVGPVAYKLALPPALSGVHDVLHV------------------------------ 1780

Query: 361  SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKRTEI 409
                   EVKTLRNRSIAF+K +L R    +E     ++E   K  E+
Sbjct: 1781 -------EVKTLRNRSIAFVK-VLWRNHHSEEAMWEREDEIREKYPEL 1790

[Close]

BLAST of CmoCh10G011030 vs. ExPASy TrEMBL
Match: A0A5A7TR61 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 PE=4 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 1.0e-182
Identity = 309/405 (76.30%), Postives = 355/405 (87.65%), Query Frame = 0


Query: 1   MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
           MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
           N++MDFI GLP+T +G+ VIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGVP
Sbjct: 203 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
           VSIVSDRD RFTS FW+GLQ A+GTRLDFSTAFHPQTDGQTE LNQ+LEDMLRAC L+F 
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
           +SWDS LHLMEF+YNNS+QATIGMAPFEALYG+ CRSP+CWDEVGE+ L+GPELV+ TNE
Sbjct: 323 DSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWDEVGEQRLMGPELVQSTNE 382

Query: 241 AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
           AVQKIR+RM TAQSRQKSYADVRRK LEFEVGD VFLKVAPMKGVLR+  +GKLSP+F+G
Sbjct: 383 AVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVG 442

Query: 301 PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
           PFEILER+GPVAY+LALPP+LS VHDVFHVSMLRKY+ DP HV+DYEPL+++E+LSY E+
Sbjct: 443 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVER 502

Query: 361 SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKR 406
            V +LAREVKTLRN+ I  +K L   +  + E  T  +E+  R R
Sbjct: 503 PVEVLAREVKTLRNKQIPLVKVLW--RNHRVEEATWEREDDMRSR 545

[Close]

BLAST of CmoCh10G011030 vs. ExPASy TrEMBL
Match: A0A5A7UZZ4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 2.5e-181
Identity = 306/405 (75.56%), Postives = 354/405 (87.41%), Query Frame = 0


Query: 1   MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
           MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
           N++MDFI+GLP+T +G+ VIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGVP
Sbjct: 203 NVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
           VSIVSDRD RFTS FW+GLQ A+GTRLDFSTAFHPQTDGQTE LNQ+LEDMLRAC L+F 
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
            SWDS LHLMEF+YNNS+QATIGMAPFEALYGK CRSP+CWDEVGE+ L+GPELV+ TNE
Sbjct: 323 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNE 382

Query: 241 AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
           A+QKIR+RM TAQSRQKSYADVRRK LEFEVGD VFLKVAPM+GVLR+  +GKLSP+F+G
Sbjct: 383 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVG 442

Query: 301 PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
           PFEILER+GPVAY+LALPP+L+  HDVFHVSMLRKY+ DP HV+DYEPL+++E++SY E+
Sbjct: 443 PFEILERIGPVAYRLALPPSLTTAHDVFHVSMLRKYVPDPSHVVDYEPLEIDENMSYTEQ 502

Query: 361 SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKR 406
            V ILAREVKTLRN+ I  +K L   +  + E  T  +E+  R R
Sbjct: 503 PVEILAREVKTLRNKEIPLVKVLW--RNHRIEEATWEREDDMRSR 545

[Close]

BLAST of CmoCh10G011030 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 4.2e-181
Identity = 306/405 (75.56%), Postives = 353/405 (87.16%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWE
Sbjct: 1039 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1098

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            N++MDFI GLP+T +G+ VIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGVP
Sbjct: 1099 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1158

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
            VSIVSDRD RFTS FW+GLQ A+GTRLDFSTAFHPQTDGQTE LNQ+LEDMLRAC L+F 
Sbjct: 1159 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1218

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
             SWDS LHLMEF+YNNS+QATIGMAPFEALYG+ CRSP+CW EVGE+ L+GPELV+ TNE
Sbjct: 1219 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1278

Query: 241  AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
            A+QKIR+RM TAQSRQKSYADVRRK LEFE+GD VFLKVAPMKGVLR+  +GKLSP+F+G
Sbjct: 1279 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 1338

Query: 301  PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
            PFEILER+GPVAY+LALPP+LS VHDVFHVSMLRKY+ DP HV+DYEPL+++E+LSY E+
Sbjct: 1339 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQ 1398

Query: 361  SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKR 406
             V +LAREVKTLRN+ I  +K L   +  + E  T  +E+  R R
Sbjct: 1399 PVEVLAREVKTLRNKQIPLVKVLW--RNHRVEEATWEREDDMRSR 1441

[Close]

BLAST of CmoCh10G011030 vs. ExPASy TrEMBL
Match: A0A5A7VDP3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1536G00010 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 5.5e-181
Identity = 304/403 (75.43%), Postives = 352/403 (87.34%), Query Frame = 0


Query: 1   MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
           MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWE
Sbjct: 209 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 268

Query: 61  NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
           N++MDFI GLP+T +G+ VIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGVP
Sbjct: 269 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 328

Query: 121 VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
           VSIVSDRD RFTS FW+GLQ A+GTRLDFSTAFHPQTDGQTE LNQ+LEDMLRAC L+F 
Sbjct: 329 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 388

Query: 181 ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
            SWDS LHLMEF+YNNS+QATIGM PFEALYG+ CRSP+CW EVGE+ L+GPELV+ TNE
Sbjct: 389 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 448

Query: 241 AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
           A+QKIR+RM TAQSRQKSYADVRRK LEFE+GD VFLKVAPMKGVLR+  +GKLSP+F+G
Sbjct: 449 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 508

Query: 301 PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
           PFEILER+GPVAY+LALPP+LS VHDVFHVSMLRKY+ DP HV+DYEPL+++E+LSY E+
Sbjct: 509 PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQ 568

Query: 361 SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGR 404
            V +LAREVKTLRN+ I  +K L   +  ++E  T  +E+  R
Sbjct: 569 PVEVLAREVKTLRNKQIPLVKVLW--RNHREEEATWEREDDMR 609

[Close]

BLAST of CmoCh10G011030 vs. NCBI nr
Match: XP_022933231.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111440131 [Cucurbita moschata])

HSP 1 Score: 664.8 bits (1714), Expect = 6.3e-187
Identity = 337/408 (82.60%), Postives = 346/408 (84.80%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQ+VKAPRQKTAGLLQPLSIPEWKWE
Sbjct: 1421 MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWE 1480

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            NI MDFIVGLPKTPKGY VIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGV 
Sbjct: 1481 NIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVL 1540

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
            VSIVSDRDPRFT AFWRGLQKALGTRLDFSTAFHPQ DGQTE LNQILEDMLRACVLDFK
Sbjct: 1541 VSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLRACVLDFK 1600

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
            ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE
Sbjct: 1601 ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 1660

Query: 241  AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
            AVQ IRARMRT QSRQKSYADVRRKSLEFEVGDP+FLKVAPMKGVLR+GHKGKLSPKFIG
Sbjct: 1661 AVQIIRARMRTDQSRQKSYADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIG 1720

Query: 301  PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
            PFEILERVGPVAYKLALPPALSGVHDV HV                              
Sbjct: 1721 PFEILERVGPVAYKLALPPALSGVHDVLHV------------------------------ 1780

Query: 361  SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKRTEI 409
                   EVKTLRNRSIAF+K +L R    +E     ++E   K  E+
Sbjct: 1781 -------EVKTLRNRSIAFVK-VLWRNHHSEEAMWEREDEIREKYPEL 1790

[Close]

BLAST of CmoCh10G011030 vs. NCBI nr
Match: KAA0043669.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 649.8 bits (1675), Expect = 2.1e-182
Identity = 309/405 (76.30%), Postives = 355/405 (87.65%), Query Frame = 0


Query: 1   MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
           MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
           N++MDFI GLP+T +G+ VIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGVP
Sbjct: 203 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
           VSIVSDRD RFTS FW+GLQ A+GTRLDFSTAFHPQTDGQTE LNQ+LEDMLRAC L+F 
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
           +SWDS LHLMEF+YNNS+QATIGMAPFEALYG+ CRSP+CWDEVGE+ L+GPELV+ TNE
Sbjct: 323 DSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWDEVGEQRLMGPELVQSTNE 382

Query: 241 AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
           AVQKIR+RM TAQSRQKSYADVRRK LEFEVGD VFLKVAPMKGVLR+  +GKLSP+F+G
Sbjct: 383 AVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVG 442

Query: 301 PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
           PFEILER+GPVAY+LALPP+LS VHDVFHVSMLRKY+ DP HV+DYEPL+++E+LSY E+
Sbjct: 443 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVER 502

Query: 361 SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKR 406
            V +LAREVKTLRN+ I  +K L   +  + E  T  +E+  R R
Sbjct: 503 PVEVLAREVKTLRNKQIPLVKVLW--RNHRVEEATWEREDDMRSR 545

[Close]

BLAST of CmoCh10G011030 vs. NCBI nr
Match: KAA0060848.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 645.2 bits (1663), Expect = 5.1e-181
Identity = 306/405 (75.56%), Postives = 354/405 (87.41%), Query Frame = 0


Query: 1   MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
           MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
           N++MDFI+GLP+T +G+ VIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGVP
Sbjct: 203 NVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
           VSIVSDRD RFTS FW+GLQ A+GTRLDFSTAFHPQTDGQTE LNQ+LEDMLRAC L+F 
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
            SWDS LHLMEF+YNNS+QATIGMAPFEALYGK CRSP+CWDEVGE+ L+GPELV+ TNE
Sbjct: 323 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNE 382

Query: 241 AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
           A+QKIR+RM TAQSRQKSYADVRRK LEFEVGD VFLKVAPM+GVLR+  +GKLSP+F+G
Sbjct: 383 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVG 442

Query: 301 PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
           PFEILER+GPVAY+LALPP+L+  HDVFHVSMLRKY+ DP HV+DYEPL+++E++SY E+
Sbjct: 443 PFEILERIGPVAYRLALPPSLTTAHDVFHVSMLRKYVPDPSHVVDYEPLEIDENMSYTEQ 502

Query: 361 SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKR 406
            V ILAREVKTLRN+ I  +K L   +  + E  T  +E+  R R
Sbjct: 503 PVEILAREVKTLRNKEIPLVKVLW--RNHRIEEATWEREDDMRSR 545

[Close]

BLAST of CmoCh10G011030 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 644.4 bits (1661), Expect = 8.8e-181
Identity = 306/405 (75.56%), Postives = 353/405 (87.16%), Query Frame = 0


Query: 1    MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
            MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWE
Sbjct: 1039 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1098

Query: 61   NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
            N++MDFI GLP+T +G+ VIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGVP
Sbjct: 1099 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1158

Query: 121  VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
            VSIVSDRD RFTS FW+GLQ A+GTRLDFSTAFHPQTDGQTE LNQ+LEDMLRAC L+F 
Sbjct: 1159 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1218

Query: 181  ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
             SWDS LHLMEF+YNNS+QATIGMAPFEALYG+ CRSP+CW EVGE+ L+GPELV+ TNE
Sbjct: 1219 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1278

Query: 241  AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
            A+QKIR+RM TAQSRQKSYADVRRK LEFE+GD VFLKVAPMKGVLR+  +GKLSP+F+G
Sbjct: 1279 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 1338

Query: 301  PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
            PFEILER+GPVAY+LALPP+LS VHDVFHVSMLRKY+ DP HV+DYEPL+++E+LSY E+
Sbjct: 1339 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQ 1398

Query: 361  SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGRKR 406
             V +LAREVKTLRN+ I  +K L   +  + E  T  +E+  R R
Sbjct: 1399 PVEVLAREVKTLRNKQIPLVKVLW--RNHRVEEATWEREDDMRSR 1441

[Close]

BLAST of CmoCh10G011030 vs. NCBI nr
Match: KAA0064005.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 644.0 bits (1660), Expect = 1.1e-180
Identity = 304/403 (75.43%), Postives = 352/403 (87.34%), Query Frame = 0


Query: 1   MHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKTAGLLQPLSIPEWKWE 60
           MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWE
Sbjct: 209 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 268

Query: 61  NIAMDFIVGLPKTPKGYIVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVP 120
           N++MDFI GLP+T +G+ VIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGVP
Sbjct: 269 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 328

Query: 121 VSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTEHLNQILEDMLRACVLDFK 180
           VSIVSDRD RFTS FW+GLQ A+GTRLDFSTAFHPQTDGQTE LNQ+LEDMLRAC L+F 
Sbjct: 329 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 388

Query: 181 ESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNE 240
            SWDS LHLMEF+YNNS+QATIGM PFEALYG+ CRSP+CW EVGE+ L+GPELV+ TNE
Sbjct: 389 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 448

Query: 241 AVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRYGHKGKLSPKFIG 300
           A+QKIR+RM TAQSRQKSYADVRRK LEFE+GD VFLKVAPMKGVLR+  +GKLSP+F+G
Sbjct: 449 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 508

Query: 301 PFEILERVGPVAYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYEPLKLNEDLSYEEK 360
           PFEILER+GPVAY+LALPP+LS VHDVFHVSMLRKY+ DP HV+DYEPL+++E+LSY E+
Sbjct: 509 PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQ 568

Query: 361 SVRILAREVKTLRNRSIAFIKELLGRKTPKKERRTTNKEEKGR 404
            V +LAREVKTLRN+ I  +K L   +  ++E  T  +E+  R
Sbjct: 569 PVEVLAREVKTLRNKQIPLVKVLW--RNHREEEATWEREDDMR 609

The following BLAST results are available for this feature:

BLAST of CmoCh10G011030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	3.5e-47	32.65	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.5e-47	32.65	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.5e-47	32.65	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.5e-47	32.65	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.5e-47	32.65	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CmoCh10G011030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYH9	3.0e-187	82.60	Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111440131 PE=4 SV=1	[more]
A0A5A7TR61	1.0e-182	76.30	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 ...	[more]
A0A5A7UZZ4	2.5e-181	75.56	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE...	[more]
A0A5A7U7V9	4.2e-181	75.56	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7VDP3	5.5e-181	75.43	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1536G00010 P...	[more]

BLAST of CmoCh10G011030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933231.1	6.3e-187	82.60	LOW QUALITY PROTEIN: uncharacterized protein LOC111440131 [Cucurbita moschata]	[more]
KAA0043669.1	2.1e-182	76.30	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060848.1	5.1e-181	75.56	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051368.1	8.8e-181	75.56	pol protein [Cucumis melo var. makuwa]	[more]
KAA0064005.1	1.1e-180	75.43	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of CmoCh10G011030 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 2..40 e-value: 3.2E-13 score: 49.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 49..255 e-value: 3.1E-44 score: 152.6
None	No IPR available	GENE3D	1.10.340.70		coord: 1..39 e-value: 6.7E-12 score: 47.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 462..492
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 1..215
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 51..214 score: 19.079451
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 52..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G011030.1	CmoCh10G011030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding