Homology
BLAST of CmoCh10G010680 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 544.7 bits (1402), Expect = 1.7e-153
Identity = 266/672 (39.58%), Postives = 409/672 (60.86%), Query Frame = 0
Query: 93 LLKACAQASSTNFGREVHGFAVKNGFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRD 152
LLK C + G+E+HG VK+GF D+F L NMY KC + A VFD+MP+RD
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 153 VVSWSTMLGCYVRSKSFGEAYRLVREMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHG 212
+VSW+T++ Y ++ A +V+ M +K S + ++S++ L + G+ IHG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 213 YVVRNVGNERIELPLTTALIDMYCKGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRF 272
Y +R+ + + ++TAL+DMY K L +A +LFDG+ +RNVVSW ++I +++
Sbjct: 261 YAMRSGFDSLVN--ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 320
Query: 273 VEGAKNFSRMLEENIAPNEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATAL 332
E F +ML+E + P +++++ + C +G L+ G+++H + G ++++ +L
Sbjct: 321 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL 380
Query: 333 IDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFSLFLKMLDSEVKPNK 392
I MY KC +V A ++F ++ + + W+A+I +A A + F +M VKP+
Sbjct: 381 ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDT 440
Query: 393 VTMVSLLSLCAEVGALDLGRWTHAYINRHGVEVDVVLETALINMYAKCGDLKTARCLFDE 452
T VS+++ AE+ +W H + R ++ +V + TAL++MYAKCG + AR +FD
Sbjct: 441 FTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 500
Query: 453 ATRRDIHMWNAMMAGFSIHGCGKEALELFSDMVCHGVEPNDITFISVFHACSHSGLVGEG 512
+ R + WNAM+ G+ HG GK ALELF +M ++PN +TF+SV ACSHSGLV G
Sbjct: 501 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 560
Query: 513 MKHFDRMVHEFGIVPKIEHYGCLVDLLGRAKRLDAAHSIIENMPMRPNTIVWGALLAACK 572
+K F M + I ++HYG +VDLLGRA RL+ A I MP++P V+GA+L AC+
Sbjct: 561 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 620
Query: 573 LHKNLALGEVAARKILELDPENCGYRVLKSNIYASEKRWTDVTSVRETMSHLGMKKEPGL 632
+HKN+ E AA ++ EL+P++ GY VL +NIY + W V VR +M G++K PG
Sbjct: 621 IHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 680
Query: 633 SWIEVNGSVHHFRSGDKTCTQTRKVHEMVTEMCIKLREAGYAPNTSAVLLNVEDEEKESA 692
S +E+ VH F SG ++K++ + ++ ++EAGY P+T+ V L VE++ KE
Sbjct: 681 SMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQL 740
Query: 693 LSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHH 752
LS HSEKLA++FGL++T GT I + KNLR+C DCH ATK +S + GR I+VRD RFHH
Sbjct: 741 LSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHH 800
Query: 753 FSEGYCSCLGYW 765
F G CSC YW
Sbjct: 801 FKNGACSCGDYW 809
BLAST of CmoCh10G010680 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 540.0 bits (1390), Expect = 4.2e-152
Identity = 293/770 (38.05%), Postives = 436/770 (56.62%), Query Frame = 0
Query: 19 LNLQQTHQIHAHCIKT-QFRNPHSF----------------FSRSHF--TPEAN---FNL 78
++L+Q Q H H I+T F +P+S ++R F P+ N +N
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 79 LISSYTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKN 138
LI +Y P + + M + + + P L+KA A+ SS + G+ +HG AVK+
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 139 GFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLV 198
SDVFV N+L++ Y CG L SAC VF + ++DVVSW++M+ +V+ S +A L
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 199 REMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYC 258
++M VK S V ++ ++ ++ +++ GR + Y+ N N + L L A++DMY
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN--VNLTLANAMLDMYT 280
Query: 259 KGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLS 318
K + A RLFD + +++ V+WT ++ G
Sbjct: 281 KCGSIEDAKRLFDAMEEKDNVTWTTMLDG------------------------------- 340
Query: 319 LITECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKD 378
Y AR + N + +KD
Sbjct: 341 ---------------------------------------YAISEDYEAAREVLNSMPQKD 400
Query: 379 VKIWSALISAYAHASCIDQAFSLFLKM-LDSEVKPNKVTMVSLLSLCAEVGALDLGRWTH 438
+ W+ALISAY ++A +F ++ L +K N++T+VS LS CA+VGAL+LGRW H
Sbjct: 401 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 460
Query: 439 AYINRHGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGK 498
+YI +HG+ ++ + +ALI+MY+KCGDL+ +R +F+ +RD+ +W+AM+ G ++HGCG
Sbjct: 461 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 520
Query: 499 EALELFSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCL 558
EA+++F M V+PN +TF +VF ACSH+GLV E F +M +GIVP+ +HY C+
Sbjct: 521 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 580
Query: 559 VDLLGRAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENC 618
VD+LGR+ L+ A IE MP+ P+T VWGALL ACK+H NL L E+A ++LEL+P N
Sbjct: 581 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 640
Query: 619 GYRVLKSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTR 678
G VL SNIYA +W +V+ +R+ M G+KKEPG S IE++G +H F SGD +
Sbjct: 641 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 700
Query: 679 KVHEMVTEMCIKLREAGYAPNTSAVLLNVEDEE-KESALSYHSEKLAMAFGLISTAPGTP 738
KV+ + E+ KL+ GY P S VL +E+EE KE +L+ HSEKLA+ +GLIST
Sbjct: 701 KVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKV 738
Query: 739 IRIIKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
IR+IKNLR+C DCH+ KL+S++Y R IIVRDR RFHHF G CSC +W
Sbjct: 761 IRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of CmoCh10G010680 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 533.9 bits (1374), Expect = 3.0e-150
Identity = 281/747 (37.62%), Postives = 431/747 (57.70%), Query Frame = 0
Query: 54 FNLLISSYTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFA 113
+N LI Y + L A +L+ M + + D + P L ACA++ + G ++HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNS-GISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 161
Query: 114 VKNGFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEA- 173
VK G+ D+FV N+L++ Y +CG L SA VFD+M +R+VVSW++M+ Y R +A
Sbjct: 162 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 221
Query: 174 ---YRLVREMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTT 233
+R+VR+ V + V ++ +I +L D+++G ++ + +RN G E +L + +
Sbjct: 222 DLFFRMVRDEE---VTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDL-MVS 281
Query: 234 ALIDMYCKGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAP 293
AL+DMY K + + A RLFD N+ A+ + +R E F+ M++ + P
Sbjct: 282 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 341
Query: 294 NEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKC---------- 353
+ I++LS I+ C + + GK H Y+LRNGF + ALIDMY KC
Sbjct: 342 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 401
Query: 354 ---------------------GQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFS 413
G+V A F + EK++ W+ +IS S ++A
Sbjct: 402 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 461
Query: 414 LFLKMLDSE-VKPNKVTMVSLLSLCAEVGALDLGRWTHAYINRHGVEVDVVLETALINMY 473
+F M E V + VTM+S+ S C +GALDL +W + YI ++G+++DV L T L++M+
Sbjct: 462 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 521
Query: 474 AKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALELFSDMVCHGVEPNDITFI 533
++CGD ++A +F+ T RD+ W A + ++ G + A+ELF DM+ G++P+ + F+
Sbjct: 522 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 581
Query: 534 SVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLGRAKRLDAAHSIIENMPM 593
ACSH GLV +G + F M+ G+ P+ HYGC+VDLLGRA L+ A +IE+MPM
Sbjct: 582 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 641
Query: 594 RPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRVLKSNIYASEKRWTDVTSV 653
PN ++W +LLAAC++ N+ + AA KI L PE G VL SN+YAS RW D+ V
Sbjct: 642 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 701
Query: 654 RETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEMVTEMCIKLREAGYAPNT 713
R +M G++K PG S I++ G H F SGD++ + + M+ E+ + G+ P+
Sbjct: 702 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 761
Query: 714 SAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAATKLLSKI 765
S VL++V+++EK LS HSEKLAMA+GLIS+ GT IRI+KNLR+C DCH+ K SK+
Sbjct: 762 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 821
BLAST of CmoCh10G010680 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 531.2 bits (1367), Expect = 2.0e-149
Identity = 291/774 (37.60%), Postives = 428/774 (55.30%), Query Frame = 0
Query: 16 HSHLNLQQTHQIHAHCIKTQFRNPHSFFSR--------SHF------------TPEAN-- 75
H+ LQ IHA IK N + S+ HF E N
Sbjct: 41 HNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLL 100
Query: 76 -FNLLISSYTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGF 135
+N + + + P +A LY M + +++ P +LK+CA++ + G+++HG
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISL-GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 160
Query: 136 AVKNGFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEA 195
+K G D++V +L++MY + G L A VFDK P RDVVS+
Sbjct: 161 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY---------------- 220
Query: 196 YRLVREMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALI 255
TALI
Sbjct: 221 --------------------------------------------------------TALI 280
Query: 256 DMYCKGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEI 315
Y + +A +LFD + ++VVSW A+I+G + + E + F M++ N+ P+E
Sbjct: 281 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 340
Query: 316 TLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGV 375
T++++++ C G+++LG+ +H ++ +GFG +L + ALID+Y KCG++ A LF +
Sbjct: 341 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 400
Query: 376 EEKDVKIWSALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGR 435
KDV W+ LI Y H + +A LF +ML S PN VTM+S+L CA +GA+D+GR
Sbjct: 401 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 460
Query: 436 WTHAYINRH--GVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSI 495
W H YI++ GV L T+LI+MYAKCGD++ A +F+ + + WNAM+ GF++
Sbjct: 461 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 520
Query: 496 HGCGKEALELFSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIE 555
HG + +LFS M G++P+DITF+ + ACSHSG++ G F M ++ + PK+E
Sbjct: 521 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLE 580
Query: 556 HYGCLVDLLGRAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILEL 615
HYGC++DLLG + A +I M M P+ ++W +LL ACK+H N+ LGE A ++++
Sbjct: 581 HYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 640
Query: 616 DPENCGYRVLKSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKT 675
+PEN G VL SNIYAS RW +V R ++ GMKK PG S IE++ VH F GDK
Sbjct: 641 EPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF 700
Query: 676 CTQTRKVHEMVTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTA 735
+ R+++ M+ EM + L +AG+ P+TS VL +E+E KE AL +HSEKLA+AFGLIST
Sbjct: 701 HPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTK 741
Query: 736 PGTPIRIIKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
PGT + I+KNLR+C +CH ATKL+SKIY R II RDR RFHHF +G CSC YW
Sbjct: 761 PGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of CmoCh10G010680 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 527.7 bits (1358), Expect = 2.2e-148
Identity = 264/681 (38.77%), Postives = 407/681 (59.77%), Query Frame = 0
Query: 85 VDNFIVPSLLKACAQASSTNFGREVHGFAVKNGFVSDVFVCNALMNMYEKCGSLVSACLV 144
+D++ + K+ + S + G ++HGF +K+GF V N+L+ Y K + SA V
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 252
Query: 145 FDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREMHFVGVKLSDVALISMIGVFGELSDM 204
FD+M +RDV+SW++++ YV + + + +M G+++ ++S+ + +
Sbjct: 253 FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 312
Query: 205 KSGRAIHGYVVRNVGNERIELPLTTALIDMYCKGDKLASAMRLFDGLSQRNVVSWTALIA 264
GRA+H V+ + E L+DMY K L SA +F +S R+VVS+T++IA
Sbjct: 313 SLGRAVHSIGVKACFSR--EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 372
Query: 265 GCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLITECGFVGALDLGKWLHAYLLRNGFGM 324
G R E K F M EE I+P+ T+ +++ C LD GK +H ++ N G
Sbjct: 373 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 432
Query: 325 SLALATALIDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFSLFLKML 384
+ ++ AL+DMY KCG + A +F+ + KD+ W+ +I Y+ ++A SLF +L
Sbjct: 433 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 492
Query: 385 DSE-VKPNKVTMVSLLSLCAEVGALDLGRWTHAYINRHGVEVDVVLETALINMYAKCGDL 444
+ + P++ T+ +L CA + A D GR H YI R+G D + +L++MYAKCG L
Sbjct: 493 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 552
Query: 445 KTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALELFSDMVCHGVEPNDITFISVFHAC 504
A LFD+ +D+ W M+AG+ +HG GKEA+ LF+ M G+E ++I+F+S+ +AC
Sbjct: 553 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 612
Query: 505 SHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLGRAKRLDAAHSIIENMPMRPNTIV 564
SHSGLV EG + F+ M HE I P +EHY C+VD+L R L A+ IENMP+ P+ +
Sbjct: 613 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 672
Query: 565 WGALLAACKLHKNLALGEVAARKILELDPENCGYRVLKSNIYASEKRWTDVTSVRETMSH 624
WGALL C++H ++ L E A K+ EL+PEN GY VL +NIYA ++W V +R+ +
Sbjct: 673 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 732
Query: 625 LGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEMVTEMCIKLREAGYAPNTSAVLLN 684
G++K PG SWIE+ G V+ F +GD + +T + + ++ ++ E GY+P T L++
Sbjct: 733 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALID 792
Query: 685 VEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAATKLLSKIYGRTII 744
E+ EKE AL HSEKLAMA G+IS+ G IR+ KNLR+C DCH K +SK+ R I+
Sbjct: 793 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 852
Query: 745 VRDRNRFHHFSEGYCSCLGYW 765
+RD NRFH F +G+CSC G+W
Sbjct: 853 LRDSNRFHQFKDGHCSCRGFW 871
BLAST of CmoCh10G010680 vs. ExPASy TrEMBL
Match:
A0A6J1HA74 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111461539 PE=3 SV=1)
HSP 1 Score: 1563.9 bits (4048), Expect = 0.0e+00
Identity = 764/764 (100.00%), Postives = 764/764 (100.00%), Query Frame = 0
Query: 1 MDQLILSAASPSGSGHSHLNLQQTHQIHAHCIKTQFRNPHSFFSRSHFTPEANFNLLISS 60
MDQLILSAASPSGSGHSHLNLQQTHQIHAHCIKTQFRNPHSFFSRSHFTPEANFNLLISS
Sbjct: 1 MDQLILSAASPSGSGHSHLNLQQTHQIHAHCIKTQFRNPHSFFSRSHFTPEANFNLLISS 60
Query: 61 YTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKNGFVS 120
YTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKNGFVS
Sbjct: 61 YTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKNGFVS 120
Query: 121 DVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREMH 180
DVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREMH
Sbjct: 121 DVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREMH 180
Query: 181 FVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKGDK 240
FVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKGDK
Sbjct: 181 FVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKGDK 240
Query: 241 LASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLITE 300
LASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLITE
Sbjct: 241 LASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLITE 300
Query: 301 CGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIW 360
CGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIW
Sbjct: 301 CGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIW 360
Query: 361 SALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYINR 420
SALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYINR
Sbjct: 361 SALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYINR 420
Query: 421 HGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALEL 480
HGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALEL
Sbjct: 421 HGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALEL 480
Query: 481 FSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLG 540
FSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLG
Sbjct: 481 FSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLG 540
Query: 541 RAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRVL 600
RAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRVL
Sbjct: 541 RAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRVL 600
Query: 601 KSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEM 660
KSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEM
Sbjct: 601 KSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEM 660
Query: 661 VTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKN 720
VTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKN
Sbjct: 661 VTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKN 720
Query: 721 LRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
LRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW
Sbjct: 721 LRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 764
BLAST of CmoCh10G010680 vs. ExPASy TrEMBL
Match:
A0A6J1JKG9 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima OX=3661 GN=LOC111485395 PE=3 SV=1)
HSP 1 Score: 1505.3 bits (3896), Expect = 0.0e+00
Identity = 734/764 (96.07%), Postives = 746/764 (97.64%), Query Frame = 0
Query: 1 MDQLILSAASPSGSGHSHLNLQQTHQIHAHCIKTQFRNPHSFFSRSHFTPEANFNLLISS 60
MDQLILSAASPSGSGHSHLNLQQTHQIHAH IKTQFRNPH+FFSRS+FTPEANFNLLISS
Sbjct: 1 MDQLILSAASPSGSGHSHLNLQQTHQIHAHFIKTQFRNPHNFFSRSNFTPEANFNLLISS 60
Query: 61 YTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKNGFVS 120
YTDNH PQAAF LYHHMRTTDAAAVDNFIVPSLLKACAQASSTN GREVHGFAVKNGFVS
Sbjct: 61 YTDNHRPQAAFNLYHHMRTTDAAAVDNFIVPSLLKACAQASSTNLGREVHGFAVKNGFVS 120
Query: 121 DVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREMH 180
DVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREMH
Sbjct: 121 DVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREMH 180
Query: 181 FVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKGDK 240
FVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVG ERIELPLTTALIDMYCKGD
Sbjct: 181 FVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGKERIELPLTTALIDMYCKGDN 240
Query: 241 LASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLITE 300
LASAMRLF+GLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENI PNEITLLSLITE
Sbjct: 241 LASAMRLFNGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIVPNEITLLSLITE 300
Query: 301 CGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIW 360
CGFVGALDLGKWLH+YLLRNGFGMSL L TALIDMYGKCGQVAYARALFN V+EKDVKIW
Sbjct: 301 CGFVGALDLGKWLHSYLLRNGFGMSLTLTTALIDMYGKCGQVAYARALFNVVDEKDVKIW 360
Query: 361 SALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYINR 420
SALISAYAH SCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYI
Sbjct: 361 SALISAYAHTSCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYIIH 420
Query: 421 HGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALEL 480
HGVEVD+VLETALINMYAKCGDLKTAR LFDEAT+RDIHMWNAMMAGFSIHGCGKEALEL
Sbjct: 421 HGVEVDIVLETALINMYAKCGDLKTARSLFDEATQRDIHMWNAMMAGFSIHGCGKEALEL 480
Query: 481 FSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLG 540
FSDM CHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLG
Sbjct: 481 FSDMECHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLG 540
Query: 541 RAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRVL 600
RAKRLDAAHSIIENMPMRPNTI+WGALLAACKLHKNL LG+VAARKILELDPENCGYRVL
Sbjct: 541 RAKRLDAAHSIIENMPMRPNTIIWGALLAACKLHKNLPLGKVAARKILELDPENCGYRVL 600
Query: 601 KSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEM 660
KSNIYASEKRWT+VTS+RE+MSHLGMKKEPGLSW EVNGSVHHFRSGDKTCTQ RKVHEM
Sbjct: 601 KSNIYASEKRWTNVTSIRESMSHLGMKKEPGLSWTEVNGSVHHFRSGDKTCTQARKVHEM 660
Query: 661 VTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKN 720
VTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKN
Sbjct: 661 VTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKN 720
Query: 721 LRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
LRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW
Sbjct: 721 LRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 764
BLAST of CmoCh10G010680 vs. ExPASy TrEMBL
Match:
A0A5A7V2V9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001350 PE=3 SV=1)
HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 651/766 (84.99%), Postives = 703/766 (91.78%), Query Frame = 0
Query: 1 MDQLILSAASPSG-SGHSHLNLQQTHQIHAHCIKTQFRNPHSFFSRSHFTPEANFNLLIS 60
M+QLILS+ S SG SG+SHLNLQQTHQ+HAH IKTQF NPH FFS+SHFTPEAN+NLLIS
Sbjct: 1 MNQLILSSPSSSGCSGYSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLIS 60
Query: 61 SYTDNHLPQAAFILYHHMRTTD-AAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKNGF 120
SYT+NHLPQA+ Y HMRT D AAA+DNFI+PSLLKACAQASS + GRE+HGFA KNGF
Sbjct: 61 SYTNNHLPQASLNCYLHMRTNDAAAALDNFILPSLLKACAQASSADLGRELHGFAQKNGF 120
Query: 121 VSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVRE 180
SDVFVCNALMNMYEKCG LVSA LVFDKMP+RDVVSWSTMLGCYVRSK+FGEA RLVRE
Sbjct: 121 ASDVFVCNALMNMYEKCGCLVSASLVFDKMPERDVVSWSTMLGCYVRSKAFGEALRLVRE 180
Query: 181 MHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKG 240
M FVGVKLS VALIS+IGVFG L DMKSGRA+HGY+VRNVG+E++E+ LTTALIDMYCK
Sbjct: 181 MQFVGVKLSGVALISLIGVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSLTTALIDMYCKC 240
Query: 241 DKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLI 300
+ LASA RLFD LS+R+VVSWT +I GCIRSCR VEGAKNF+RMLEE + PNEITLLSLI
Sbjct: 241 ECLASAQRLFDRLSKRSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLI 300
Query: 301 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 360
TECGFV LDLGKW HAYLLRNGFGMSLAL TALIDMYGKCGQV YARALFNGVE+KDVK
Sbjct: 301 TECGFVKTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVK 360
Query: 361 IWSALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYI 420
IWSALISAYAH SC+DQ F+LFL+MLD+EVKPNKVTMVSLLSLCAE G LDLG+WTHAYI
Sbjct: 361 IWSALISAYAHVSCMDQVFNLFLEMLDNEVKPNKVTMVSLLSLCAEAGTLDLGKWTHAYI 420
Query: 421 NRHGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEAL 480
NRHG+EVDV+LETALINMY KCGD+ AR LFDEAT+RDIHMWNAMMAGFS+HGCGKEAL
Sbjct: 421 NRHGLEVDVILETALINMYVKCGDVTIARSLFDEATQRDIHMWNAMMAGFSMHGCGKEAL 480
Query: 481 ELFSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDL 540
ELFS+M HGVEPNDITFIS+FHACSHSGLV EG KHF+RMVH FGIVPK+EHYGCLVDL
Sbjct: 481 ELFSEMESHGVEPNDITFISIFHACSHSGLVVEGKKHFNRMVHSFGIVPKMEHYGCLVDL 540
Query: 541 LGRAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYR 600
LGRA L+ AH+IIENMPMRPNTI+WGALLAACKLHKNLALGEVAARKILELDP+NCGY
Sbjct: 541 LGRAGHLEEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYS 600
Query: 601 VLKSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVH 660
VLKSNIYAS KRW DVTSVRETMSHLGMKKEPGLSWIEVNGSVHHF+SGDKTCTQT KV+
Sbjct: 601 VLKSNIYASAKRWNDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFKSGDKTCTQTTKVY 660
Query: 661 EMVTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRII 720
EMV EMCIKLREAGY PNT+ VLLN+++EEKESALSYHSEKLAMAFGLISTAPGTPIRII
Sbjct: 661 EMVAEMCIKLREAGYTPNTAEVLLNIDEEEKESALSYHSEKLAMAFGLISTAPGTPIRII 720
Query: 721 KNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
KNLRICDDCHAA KLLSKIY RTIIVRDRNRFHHFSEGYCSCLGYW
Sbjct: 721 KNLRICDDCHAAMKLLSKIYARTIIVRDRNRFHHFSEGYCSCLGYW 766
BLAST of CmoCh10G010680 vs. ExPASy TrEMBL
Match:
A0A1S3CJ58 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501009 PE=3 SV=1)
HSP 1 Score: 1345.5 bits (3481), Expect = 0.0e+00
Identity = 650/766 (84.86%), Postives = 703/766 (91.78%), Query Frame = 0
Query: 1 MDQLILSAASPSG-SGHSHLNLQQTHQIHAHCIKTQFRNPHSFFSRSHFTPEANFNLLIS 60
M+QLILS+ S SG SG+SHLNLQQTHQ+HAH IKTQF NPH FFS+SHFTPEAN+NLLIS
Sbjct: 1 MNQLILSSPSSSGCSGYSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLIS 60
Query: 61 SYTDNHLPQAAFILYHHMRTTD-AAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKNGF 120
SYT+NHLPQA+ Y HMRT D AAA+DNFI+PSLLKACAQASS + GRE+HGFA KNGF
Sbjct: 61 SYTNNHLPQASLNCYLHMRTNDAAAALDNFILPSLLKACAQASSADLGRELHGFAQKNGF 120
Query: 121 VSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVRE 180
SDVFVCNALMNMYEKCG LVSA LVFDKMP+RDVVSWSTMLGCYVRSK+FGEA RLVRE
Sbjct: 121 ASDVFVCNALMNMYEKCGCLVSASLVFDKMPERDVVSWSTMLGCYVRSKAFGEALRLVRE 180
Query: 181 MHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKG 240
M FVGVKLS VALIS+IGVFG L DMKSGRA+HGY++RNVG+E++E+ LTTALIDMYCK
Sbjct: 181 MQFVGVKLSGVALISLIGVFGNLLDMKSGRAVHGYIMRNVGDEKMEVSLTTALIDMYCKC 240
Query: 241 DKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLI 300
+ LASA RLFD LS+R+VVSWT +I GCIRSCR VEGAKNF+RMLEE + PNEITLLSLI
Sbjct: 241 ECLASAQRLFDRLSKRSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLI 300
Query: 301 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 360
TECGFV LDLGKW HAYLLRNGFGMSLAL TALIDMYGKCGQV YARALFNGVE+KDVK
Sbjct: 301 TECGFVKTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVK 360
Query: 361 IWSALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYI 420
IWSALISAYAH SC+DQ F+LFL+MLD+EVKPNKVTMVSLLSLCAE G LDLG+WTHAYI
Sbjct: 361 IWSALISAYAHVSCMDQVFNLFLEMLDNEVKPNKVTMVSLLSLCAEAGTLDLGKWTHAYI 420
Query: 421 NRHGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEAL 480
NRHG+EVDV+LETALINMY KCGD+ AR LFDEAT+RDIHMWNAMMAGFS+HGCGKEAL
Sbjct: 421 NRHGLEVDVILETALINMYVKCGDVTIARSLFDEATQRDIHMWNAMMAGFSMHGCGKEAL 480
Query: 481 ELFSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDL 540
ELFS+M HGVEPNDITFIS+FHACSHSGLV EG KHF+RMVH FGIVPK+EHYGCLVDL
Sbjct: 481 ELFSEMESHGVEPNDITFISIFHACSHSGLVVEGKKHFNRMVHNFGIVPKMEHYGCLVDL 540
Query: 541 LGRAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYR 600
LGRA L+ AH+IIENMPMRPNTI+WGALLAACKLHKNLALGEVAARKILELDP+NCGY
Sbjct: 541 LGRAGHLEEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYS 600
Query: 601 VLKSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVH 660
VLKSNIYAS KRW DVTSVRETMSHLGMKKEPGLSWIEVNGSVHHF+SGDKTCTQT KV+
Sbjct: 601 VLKSNIYASAKRWNDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFKSGDKTCTQTTKVY 660
Query: 661 EMVTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRII 720
EMV EMCIKLREAGY PNT+ VLLN+++EEKESALSYHSEKLAMAFGLISTAPGTPIRII
Sbjct: 661 EMVAEMCIKLREAGYTPNTAEVLLNIDEEEKESALSYHSEKLAMAFGLISTAPGTPIRII 720
Query: 721 KNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
KNLRICDDCHAA KLLSKIY RTIIVRDRNRFHHFSEGYCSCLGYW
Sbjct: 721 KNLRICDDCHAAMKLLSKIYARTIIVRDRNRFHHFSEGYCSCLGYW 766
BLAST of CmoCh10G010680 vs. ExPASy TrEMBL
Match:
A0A0A0LYC2 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G690260 PE=3 SV=1)
HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 635/765 (83.01%), Postives = 701/765 (91.63%), Query Frame = 0
Query: 1 MDQLILSAASPSG-SGHSHLNLQQTHQIHAHCIKTQFRNPHSFFSRSHFTPEANFNLLIS 60
M+QLIL + S SG SGHSHLNLQQTHQ+HAH IKTQF NPH FFS+SHFTPEAN+NLLIS
Sbjct: 1 MNQLILCSPSFSGCSGHSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLIS 60
Query: 61 SYTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKNGFV 120
SYT+NHLPQA+F Y HMR+ DAAA+DNFI+PSLLKACAQASS + GRE+HGFA KNGF
Sbjct: 61 SYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFA 120
Query: 121 SDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREM 180
SDVFVCNALMNMYEKCG LVSA LVFD+MP+RDVVSW+TMLGCYVRSK+FGEA RLVREM
Sbjct: 121 SDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREM 180
Query: 181 HFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKGD 240
FVGVKLS VALIS+I VFG L DMKSGRA+HGY+VRNVG+E++E+ +TTALIDMYCKG
Sbjct: 181 QFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGG 240
Query: 241 KLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLIT 300
LASA RLFD LS+R+VVSWT +IAGCIRSCR EGAKNF+RMLEE + PNEITLLSLIT
Sbjct: 241 CLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLIT 300
Query: 301 ECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKI 360
ECGFVG LDLGKW HAYLLRNGFGMSLAL TALIDMYGKCGQV YARALFNGV++KDVKI
Sbjct: 301 ECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKI 360
Query: 361 WSALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYIN 420
WS LISAYAH SC+DQ F+LF++ML+++VKPN VTMVSLLSLCAE GALDLG+WTHAYIN
Sbjct: 361 WSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYIN 420
Query: 421 RHGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALE 480
RHG+EVDV+LETALINMYAKCGD+ AR LF+EA +RDI MWN MMAGFS+HGCGKEALE
Sbjct: 421 RHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALE 480
Query: 481 LFSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLL 540
LFS+M HGVEPNDITF+S+FHACSHSGLV EG K+F++MVH+FGIVPK+EHYGCLVDLL
Sbjct: 481 LFSEMESHGVEPNDITFVSIFHACSHSGLVVEGKKYFNKMVHDFGIVPKMEHYGCLVDLL 540
Query: 541 GRAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRV 600
GRA LD AH+IIENMPMRPNTI+WGALLAACKLHKNLALGEVAARKILELDP+NCGY V
Sbjct: 541 GRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSV 600
Query: 601 LKSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHE 660
LKSNIYAS KRW DVTSVRE MSH GMKKEPGLSWIEV+GSVHHF+SGDK CTQT KV+E
Sbjct: 601 LKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYE 660
Query: 661 MVTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIK 720
MVTEMCIKLRE+GY PNT+AVLLN+++EEKESALSYHSEKLA AFGLISTAPGTPIRI+K
Sbjct: 661 MVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVK 720
Query: 721 NLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
NLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSC+GYW
Sbjct: 721 NLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 765
BLAST of CmoCh10G010680 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 544.7 bits (1402), Expect = 1.2e-154
Identity = 266/672 (39.58%), Postives = 409/672 (60.86%), Query Frame = 0
Query: 93 LLKACAQASSTNFGREVHGFAVKNGFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRD 152
LLK C + G+E+HG VK+GF D+F L NMY KC + A VFD+MP+RD
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 153 VVSWSTMLGCYVRSKSFGEAYRLVREMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHG 212
+VSW+T++ Y ++ A +V+ M +K S + ++S++ L + G+ IHG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 213 YVVRNVGNERIELPLTTALIDMYCKGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRF 272
Y +R+ + + ++TAL+DMY K L +A +LFDG+ +RNVVSW ++I +++
Sbjct: 261 YAMRSGFDSLVN--ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 320
Query: 273 VEGAKNFSRMLEENIAPNEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATAL 332
E F +ML+E + P +++++ + C +G L+ G+++H + G ++++ +L
Sbjct: 321 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL 380
Query: 333 IDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFSLFLKMLDSEVKPNK 392
I MY KC +V A ++F ++ + + W+A+I +A A + F +M VKP+
Sbjct: 381 ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDT 440
Query: 393 VTMVSLLSLCAEVGALDLGRWTHAYINRHGVEVDVVLETALINMYAKCGDLKTARCLFDE 452
T VS+++ AE+ +W H + R ++ +V + TAL++MYAKCG + AR +FD
Sbjct: 441 FTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 500
Query: 453 ATRRDIHMWNAMMAGFSIHGCGKEALELFSDMVCHGVEPNDITFISVFHACSHSGLVGEG 512
+ R + WNAM+ G+ HG GK ALELF +M ++PN +TF+SV ACSHSGLV G
Sbjct: 501 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 560
Query: 513 MKHFDRMVHEFGIVPKIEHYGCLVDLLGRAKRLDAAHSIIENMPMRPNTIVWGALLAACK 572
+K F M + I ++HYG +VDLLGRA RL+ A I MP++P V+GA+L AC+
Sbjct: 561 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 620
Query: 573 LHKNLALGEVAARKILELDPENCGYRVLKSNIYASEKRWTDVTSVRETMSHLGMKKEPGL 632
+HKN+ E AA ++ EL+P++ GY VL +NIY + W V VR +M G++K PG
Sbjct: 621 IHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 680
Query: 633 SWIEVNGSVHHFRSGDKTCTQTRKVHEMVTEMCIKLREAGYAPNTSAVLLNVEDEEKESA 692
S +E+ VH F SG ++K++ + ++ ++EAGY P+T+ V L VE++ KE
Sbjct: 681 SMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQL 740
Query: 693 LSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHH 752
LS HSEKLA++FGL++T GT I + KNLR+C DCH ATK +S + GR I+VRD RFHH
Sbjct: 741 LSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHH 800
Query: 753 FSEGYCSCLGYW 765
F G CSC YW
Sbjct: 801 FKNGACSCGDYW 809
BLAST of CmoCh10G010680 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 540.0 bits (1390), Expect = 3.0e-153
Identity = 293/770 (38.05%), Postives = 436/770 (56.62%), Query Frame = 0
Query: 19 LNLQQTHQIHAHCIKT-QFRNPHSF----------------FSRSHF--TPEAN---FNL 78
++L+Q Q H H I+T F +P+S ++R F P+ N +N
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 79 LISSYTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKN 138
LI +Y P + + M + + + P L+KA A+ SS + G+ +HG AVK+
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 139 GFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLV 198
SDVFV N+L++ Y CG L SAC VF + ++DVVSW++M+ +V+ S +A L
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 199 REMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYC 258
++M VK S V ++ ++ ++ +++ GR + Y+ N N + L L A++DMY
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN--VNLTLANAMLDMYT 280
Query: 259 KGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLS 318
K + A RLFD + +++ V+WT ++ G
Sbjct: 281 KCGSIEDAKRLFDAMEEKDNVTWTTMLDG------------------------------- 340
Query: 319 LITECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKD 378
Y AR + N + +KD
Sbjct: 341 ---------------------------------------YAISEDYEAAREVLNSMPQKD 400
Query: 379 VKIWSALISAYAHASCIDQAFSLFLKM-LDSEVKPNKVTMVSLLSLCAEVGALDLGRWTH 438
+ W+ALISAY ++A +F ++ L +K N++T+VS LS CA+VGAL+LGRW H
Sbjct: 401 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 460
Query: 439 AYINRHGVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGK 498
+YI +HG+ ++ + +ALI+MY+KCGDL+ +R +F+ +RD+ +W+AM+ G ++HGCG
Sbjct: 461 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 520
Query: 499 EALELFSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCL 558
EA+++F M V+PN +TF +VF ACSH+GLV E F +M +GIVP+ +HY C+
Sbjct: 521 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 580
Query: 559 VDLLGRAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENC 618
VD+LGR+ L+ A IE MP+ P+T VWGALL ACK+H NL L E+A ++LEL+P N
Sbjct: 581 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 640
Query: 619 GYRVLKSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTR 678
G VL SNIYA +W +V+ +R+ M G+KKEPG S IE++G +H F SGD +
Sbjct: 641 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 700
Query: 679 KVHEMVTEMCIKLREAGYAPNTSAVLLNVEDEE-KESALSYHSEKLAMAFGLISTAPGTP 738
KV+ + E+ KL+ GY P S VL +E+EE KE +L+ HSEKLA+ +GLIST
Sbjct: 701 KVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKV 738
Query: 739 IRIIKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
IR+IKNLR+C DCH+ KL+S++Y R IIVRDR RFHHF G CSC +W
Sbjct: 761 IRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of CmoCh10G010680 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 533.9 bits (1374), Expect = 2.1e-151
Identity = 281/747 (37.62%), Postives = 431/747 (57.70%), Query Frame = 0
Query: 54 FNLLISSYTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFA 113
+N LI Y + L A +L+ M + + D + P L ACA++ + G ++HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNS-GISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 161
Query: 114 VKNGFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEA- 173
VK G+ D+FV N+L++ Y +CG L SA VFD+M +R+VVSW++M+ Y R +A
Sbjct: 162 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 221
Query: 174 ---YRLVREMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTT 233
+R+VR+ V + V ++ +I +L D+++G ++ + +RN G E +L + +
Sbjct: 222 DLFFRMVRDEE---VTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDL-MVS 281
Query: 234 ALIDMYCKGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAP 293
AL+DMY K + + A RLFD N+ A+ + +R E F+ M++ + P
Sbjct: 282 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 341
Query: 294 NEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKC---------- 353
+ I++LS I+ C + + GK H Y+LRNGF + ALIDMY KC
Sbjct: 342 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 401
Query: 354 ---------------------GQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFS 413
G+V A F + EK++ W+ +IS S ++A
Sbjct: 402 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 461
Query: 414 LFLKMLDSE-VKPNKVTMVSLLSLCAEVGALDLGRWTHAYINRHGVEVDVVLETALINMY 473
+F M E V + VTM+S+ S C +GALDL +W + YI ++G+++DV L T L++M+
Sbjct: 462 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 521
Query: 474 AKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALELFSDMVCHGVEPNDITFI 533
++CGD ++A +F+ T RD+ W A + ++ G + A+ELF DM+ G++P+ + F+
Sbjct: 522 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 581
Query: 534 SVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLGRAKRLDAAHSIIENMPM 593
ACSH GLV +G + F M+ G+ P+ HYGC+VDLLGRA L+ A +IE+MPM
Sbjct: 582 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 641
Query: 594 RPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRVLKSNIYASEKRWTDVTSV 653
PN ++W +LLAAC++ N+ + AA KI L PE G VL SN+YAS RW D+ V
Sbjct: 642 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 701
Query: 654 RETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEMVTEMCIKLREAGYAPNT 713
R +M G++K PG S I++ G H F SGD++ + + M+ E+ + G+ P+
Sbjct: 702 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 761
Query: 714 SAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAATKLLSKI 765
S VL++V+++EK LS HSEKLAMA+GLIS+ GT IRI+KNLR+C DCH+ K SK+
Sbjct: 762 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 821
BLAST of CmoCh10G010680 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 531.2 bits (1367), Expect = 1.4e-150
Identity = 291/774 (37.60%), Postives = 428/774 (55.30%), Query Frame = 0
Query: 16 HSHLNLQQTHQIHAHCIKTQFRNPHSFFSR--------SHF------------TPEAN-- 75
H+ LQ IHA IK N + S+ HF E N
Sbjct: 41 HNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLL 100
Query: 76 -FNLLISSYTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGF 135
+N + + + P +A LY M + +++ P +LK+CA++ + G+++HG
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISL-GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 160
Query: 136 AVKNGFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEA 195
+K G D++V +L++MY + G L A VFDK P RDVVS+
Sbjct: 161 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY---------------- 220
Query: 196 YRLVREMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALI 255
TALI
Sbjct: 221 --------------------------------------------------------TALI 280
Query: 256 DMYCKGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEI 315
Y + +A +LFD + ++VVSW A+I+G + + E + F M++ N+ P+E
Sbjct: 281 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 340
Query: 316 TLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGV 375
T++++++ C G+++LG+ +H ++ +GFG +L + ALID+Y KCG++ A LF +
Sbjct: 341 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 400
Query: 376 EEKDVKIWSALISAYAHASCIDQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGR 435
KDV W+ LI Y H + +A LF +ML S PN VTM+S+L CA +GA+D+GR
Sbjct: 401 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 460
Query: 436 WTHAYINRH--GVEVDVVLETALINMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSI 495
W H YI++ GV L T+LI+MYAKCGD++ A +F+ + + WNAM+ GF++
Sbjct: 461 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 520
Query: 496 HGCGKEALELFSDMVCHGVEPNDITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIE 555
HG + +LFS M G++P+DITF+ + ACSHSG++ G F M ++ + PK+E
Sbjct: 521 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLE 580
Query: 556 HYGCLVDLLGRAKRLDAAHSIIENMPMRPNTIVWGALLAACKLHKNLALGEVAARKILEL 615
HYGC++DLLG + A +I M M P+ ++W +LL ACK+H N+ LGE A ++++
Sbjct: 581 HYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 640
Query: 616 DPENCGYRVLKSNIYASEKRWTDVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKT 675
+PEN G VL SNIYAS RW +V R ++ GMKK PG S IE++ VH F GDK
Sbjct: 641 EPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF 700
Query: 676 CTQTRKVHEMVTEMCIKLREAGYAPNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTA 735
+ R+++ M+ EM + L +AG+ P+TS VL +E+E KE AL +HSEKLA+AFGLIST
Sbjct: 701 HPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTK 741
Query: 736 PGTPIRIIKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 765
PGT + I+KNLR+C +CH ATKL+SKIY R II RDR RFHHF +G CSC YW
Sbjct: 761 PGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of CmoCh10G010680 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 530.8 bits (1366), Expect = 1.8e-150
Identity = 280/743 (37.69%), Postives = 429/743 (57.74%), Query Frame = 0
Query: 54 FNLLISSYTDNHLPQAAFILYHHMRTTDAAAVDNFIVPSLLKACAQASSTNFGREVHGFA 113
+N LI Y + L A +L+ M + + D + P L ACA++ + G ++HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNS-GISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 161
Query: 114 VKNGFVSDVFVCNALMNMYEKCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEA- 173
VK G+ D+FV N+L++ Y +CG L SA VFD+M +R+VVSW++M+ Y R +A
Sbjct: 162 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 221
Query: 174 ---YRLVREMHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTT 233
+R+VR+ V + V ++ +I +L D+++G ++ + +RN G E +L + +
Sbjct: 222 DLFFRMVRDEE---VTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDL-MVS 281
Query: 234 ALIDMYCKGDKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAP 293
AL+DMY K + + A RLFD N+ A+ + +R E F+ M++ + P
Sbjct: 282 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 341
Query: 294 NEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKC---------- 353
+ I++LS I+ C + + GK H Y+LRNGF + ALIDMY KC
Sbjct: 342 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 401
Query: 354 ---------------------GQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFS 413
G+V A F + EK++ W+ +IS S ++A
Sbjct: 402 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 461
Query: 414 LFLKMLDSE-VKPNKVTMVSLLSLCAEVGALDLGRWTHAYINRHGVEVDVVLETALINMY 473
+F M E V + VTM+S+ S C +GALDL +W + YI ++G+++DV L T L++M+
Sbjct: 462 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 521
Query: 474 AKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALELFSDMVCHGVEPNDITFI 533
++CGD ++A +F+ T RD+ W A + ++ G + A+ELF DM+ G++P+ + F+
Sbjct: 522 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 581
Query: 534 SVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLGRAKRLDAAHSIIENMPM 593
ACSH GLV +G + F M+ G+ P+ HYGC+VDLLGRA L+ A +IE+MPM
Sbjct: 582 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 641
Query: 594 RPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRVLKSNIYASEKRWTDVTSV 653
PN ++W +LLAAC++ N+ + AA KI L PE G VL SN+YAS RW D+ V
Sbjct: 642 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 701
Query: 654 RETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEMVTEMCIKLREAGYAPNT 713
R +M G++K PG S I++ G H F SGD++ + + M+ E+ + G+ P+
Sbjct: 702 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 761
Query: 714 SAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAATKLLSKI 761
S VL++V+++EK LS HSEKLAMA+GLIS+ GT IRI+KNLR+C DCH+ K SK+
Sbjct: 762 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 821
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q3E6Q1 | 1.7e-153 | 39.58 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
O82380 | 4.2e-152 | 38.05 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 3.0e-150 | 37.62 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 2.0e-149 | 37.60 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9SN39 | 2.2e-148 | 38.77 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HA74 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cuc... | [more] |
A0A6J1JKG9 | 0.0e+00 | 96.07 | pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima O... | [more] |
A0A5A7V2V9 | 0.0e+00 | 84.99 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CJ58 | 0.0e+00 | 84.86 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cuc... | [more] |
A0A0A0LYC2 | 0.0e+00 | 83.01 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G6902... | [more] |
Match Name | E-value | Identity | Description | |
AT1G11290.1 | 1.2e-154 | 39.58 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G29760.1 | 3.0e-153 | 38.05 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.2 | 2.1e-151 | 37.62 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT1G08070.1 | 1.4e-150 | 37.60 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 1.8e-150 | 37.69 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |