CmoCh10G009720 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G009720
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Nuclear transcription factor Y subunit
Location	Cmo_Chr10: 4904211 .. 4909953 (-)
RNA-Seq Expression	CmoCh10G009720
Synteny	CmoCh10G009720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAGTCGAATTGACCCAAATAATGTGAAAAATAGGATTCACAACTCAACCCAACCTTACCATACTTTCTAAATTGCTACCCGAGTCATTATATGTTAGCCGCGATCGTATTATAATTTGTGAATATTTGATATTTAAGTTCTAAAATATTTTATTATTAATGTGACATTTATGCAAGATTTTTTTTAAATAATAAAAAAAACAATTCTACCATTTAACCAGACTCAGAAAATAGAGGATTGGGTTGGTTGGGTCGTGAATCGTATTTGGGTCATTCAGATTACGGACCCAACACGAAATTTTGGATTTGTCCAAAAAAGATTCAAATCCGACCCATAATTATAATTAAATATTTTAAATAAATTATATAGATATTTATTTTGAAAAGTTAGGATAAATTAAGTAAATAATATTCCTATAATTTATTTGTATATTTAAATTATTTTATTACAAAGATCTAATTTAGATGAAAATTTAATATTAAAAAAGGGACAATATTTATAATAATAATAAAAAAAAAAGACAAAGGAAGGAAGAGAAGAAGAGAGGGTGAGGTCCCACAGTGGGTGAGATTATCATATCCGTAGCTTTGTGATTTAAAAACCCTCAAAGTTGAAACTGAGTCTTCCTACTGAGAATTTTTCATTTTTGGAATTCACAGCTTTTTCAATTCACCAAAAAGGGACTAATTTCAATCTCCCTGTTTCTTTTATTCTTCGAATTCTCTTTGTTCCTTTCAGATTTTGTACGTTGCTCGAATTCCTTCCGGTAAGCTATTTTTCTTGGATTCTTTCGTTTGGCTTGCTATGTATATCTGGTGTTTGATTTCTAGGGTATTCGCGCAATTCGCTTGTGTAGGGATTCTTTTGCCCTCTTTTTGGGGTTGTTGGGTGATTGATGGTTTCAGATTTGGTTTTGATTTTGCGATTGTTGGGAAATTGGATGGATGATGTTATGGGAGTTGAAAGCTGATTGATGTGTTACGGATGAGAATTCCTCTGACGCTCTGTTTTTCTTATTTGTTTGAGGGCTTTTTTTTTAAAGAAAAAAAAAATTATGTGAGGTTACTGGATAACATGTGTCAGATGATCACAGGTTTTGAAGATGTTGATGGATAAAGGAACTGAAAATTTGTGCCTGTTGCTTTTTTCTGTGTCTGGATTTCCTGATTCTAGGTAGGTCACTTTTGCATCATTTGAGTAACAAGAAACACACATCTGGTGGTATAATTCAGTCTTAGCTTATGAAATAGGATATGCTGTTGATGGTAATTTAGTGCATGTAACTTTCTGGATGCCAGTGAACGAATATTTTTGTACTTATCACCTGAGATTAGCACTTTTTCTGCTTTGTTTTTATTTGTTTATTTTATTTATAATCATTCCCCAAGTATGTGTGACCTGGTACTATGTTCTGTTGGTTCTTAAAACGAAGCTAGGATGTTGGAGAGCAACTTTCAAGAGAAAATAGTTCTATTTATTGCAAGGTGAAGCTTTATAAATTCTCTAGGGTTGGGTATCTTTCAGGTTTTACTTGTTCTTCATCTGGTATTAACTGATCGTAAGAGCATGCTCTATAAGTTAAGCTTATTGGCTTTGTGATTACTTTGGATTTTAACTTGGAATAGTTTCTGGGTTAGCTTTATTTGGTCTGGTTTTGTTGGTGGGAATAAGGCATTTGGTGCGTATATGTGATGTCCCGCATTGGTTGGGGAGGAGAACAAATCACCCTTTATAAAGTTGTGGAAACCTTCCCCTAGCAGACGTGTTTTAAAGCCTTGAGGGGAATCCCGAAAGGGAAAGCCTAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACACCGGACGATGTGCCAACCTTCTCGCTGTTCCCTGAAGGAGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCTGAAGGGGGGTGGATTGTGATGTCTCACATTGGTTGGGGAGGAGAACAAAACACTCTTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGTCCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGATGGATCTGGGTTGTTACAAATGTCAGCGAGGACGCTAGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAATCACCCTTTATAAAGGTATGGAAATCTTCCCCTATCAGACGTGTTTTAAAGCCTTGAGGGGAAGCACGAAAGGAAAAGTCCGAAGAGGACAATATCTGCTAGCGGTGGATCTGAGTCATTACAGAATCCCAACGATATAATATGGTTAATAGTATTTTATTGAGCTGCATTTTTGGATTTTTTTTTTTTTTTTGTGCCTTTTTGTTGCCACAATTTAAGTGCCCTGCATCGTCTAATCAATTTATGGACAATTAAACCCTAAATTTCAAGAGATGTGAAGGAAAAGAGTGTGTGTGTGCACGCGCTCGAGAGAGAGAAGAGAAAAATGGGTTATTGTAGTCATCCTGGAATCCGAATTGAGTCATTCATCTTACATGTAACAGAAGAGATGTGGAAAACAATTTAGTCAAAAGGTATTGAAAAGATGTATTAGTACAGGATTGAATCATGAAAAACAATGGTATTGGGAAGGTGTAATTATACAGGCTGAATCATGGAAAACATGTTTTTTACGTCTCCTGCAGTTACTTTTTACTCCTTGCCTTACAAAAGTAGAGGGAGAAGAGAACTTTTTCCCAAAGAAAGAGACTGAAGAGTCTAAGTTCTCACCAACTACCTTGTAACTAGGTCGGGTTCTACCGTTTTGGACTATGACAAGGATTTGTGTTAGCTTTCAATTTATGATTATCATAAATTGAAACAACGGATCATGGATGATATTGGAAGCTAAGATTACAATTAATATGGAATAATACTTAAATTGTTACCGGAGATAGCAAAGGGTTTTTTTATATTTTTTATTTTTCTAACTGTTGGTTATCAAAATTTACACGTTGATAATTGAGAACTTGAGGCTCTTTTGTTTGTTTCAAAGGGTTTGAAGGTATGCAGTCAAAGTCAGAAACCAATAATCAGCTCCAATCTGATCCAAATGGTGCTCCATCCACGACTATCTATTACGAACCCTGGTGCAGTTCTATGGGGTACAGTCCTTTTCCGTTACCTGTGGTTGGGGGAAATGCTTCCAGTTCGACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAACGACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCTCATTCTGGTACATCTTTAACTCATATCTGTTAGAGAAAGTTCCCTCTTCAATAAGCAACTCAGTCATTGAGGTTTTCTGTTTTGTGCCTGACAATGTGGAATCTGAACTTATTTGAAGGTGTTATTGTGAAATTTGAGATAACAACTTTGGAAGTCAAAAGTCAACTTAGGTAGAATTATTTGACCCTTTATTGTTTTCAGATATTTGTGTTTTGATGGCTGCTTTAGAATACCATCAAAACACGCGCATTGATAATTATTAGGCTTACCATATTGTGATATACTTTTGTTACGTTGTAAATTATTTAAAAAATAGCAACGAAGTAACGTGCAGAATAAGAAAATTTTCATATGGCTGTTTATGCCCGAATAACAATAGCATCTCAACGATTTCAGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTCTCATCCAATTTGCCAGCTATGCACGGTGAAAGTCTGACACAGTCGACACAACTTGAACTTGTTGGTCACTCTATTGTAAGTTCAATTGCTGTCCAGTCTTAGAAAACTCTTTATCTTGTTAGTACAACTTTTGTGATTCTAGTCCCGGATTCATAGATTCCAATGGCCAAGTTACGATTGTATAATATTATTGAAGAATTTCTTGTGTTTCTTGACATACGTTTGCAGGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGGGGAATGATGGCTTTCTATGGTCATCAGCCCGTGGTATGTAATTATCTCAACTTCATACAAACCCGAGACTGGTTTCACCGTCATTATCTCTACAATTACTTGGCTCTGCGCATTTAACATAGATGTTTAAATCAAAATCAAAATGGCACTTCTAATTCACACATGTAGCACTCTTGACCCTACCAAGAAATTGAATTTCAAGTCCCATTCTTGGTCCAACTTTCATGAGAAATGGTGCTTGTGCTTCCAAACCTGTAGAATGCAATTTGTTTGCTGTCACACATCAGTTAAATTTTTTCTTTTACTTCCGAGGTTGTTTTCATGAATGTTTCATGAAATATTATACTGAATGCTGAGTGGTCTATGCTGATGATTTGGATTAAGACCTACACTTTTACATCCATTTCTCTTCAGACCATGATTAGGTCGAAGGGCAATGCTTCTAAAATTTAAAACTTCTTCATTCAAATTTTGTTTCTCACTGTGTAGTTTGTAACCCAAAAAGGACTGTATCATGTGATAATTTGTTATATCTAATATAGCTTCAGCATACACGGAGAGCTGATGTTTCTATTGCATAAAGTCTTAACAGAATTTTCATGCTTTGAAATTTATTTTTGTCATTGACAGGGCTATCCTATGGTCGGAGCGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCCGAGGCTGAAAAGAAGTTGATAAAAGCTAGAAAGGTGGATTTTGTATCTTTTTGTTGGACTGGATTGTTTTTGTGTGTGGAAGGAGGGTTGATGCTTGATCTTTTCTCTGATAGACAATATTGATAGGTAGTATTGGGATATAGTTTAGCTTATACTGGATCATGTTCAATATCTCATGGCACCCTTTGGCATGTTCTTGTTCAGTCGTGGTTCGGTATGCTAATTAAACCAGTTCAATCAATCAAGTGCCAGCAGTTTGGTTAATAAACATGGATGCCCATCTTTTTTGGCGATGTTGCTCACTTTTCTTATTCGACAGCCATACCTTCACGAGTCTAGACACCAGCATGCCATAAGAAGGTCGAGGAGCAGTGGAGGGCGTTTTGCGAAGAAAAATGAAGCTGATGGAAAGGAGAGTTCTGAACAGCAGCACGGAAGCTCCTTGACAATCAAGGCCTCTGAGTAGCAACCTGCACCAGCCACTGGAGGTGAACGCCAAGACAATGACCAAAATTGGATCAGGGGGACGGGGGATCGTCGATCGCTTGTTCGTGCTTGTTTGTGCTTGTTTGTTGAAGTATTACTGCGTTCCTGGCAAGCGCGCTAGGCGGCAAATCATTCTTGGCTTTGATCTGTTGTTGTTGTGAAGGGGTAATAAAAGAAAGAATGTGGAATGATATGTGTGACTCGCAGGATTAGTTGAAAGTCCAAGAGCTTTCTTCATTCCACTCTTCTTGTTTGCCTTTTATTGTACAGAGTTTGTGGGAACTTTGACCTCTTGTATTGTATAGTAGGAGTGAAACTAAATGAATCTTAAGGCTTAGGAAACTTATAGATTGTTATTCACAAAGCTTACGCTTTAAAAGATTTTAGTTTTTAATATCCAAAGTTGGAATATTATTGGTGCGTGCGGGTGCGGATTACTTTTAGT

mRNA sequence

ATGTTTAGTCGAATTGACCCAAATAATATTTTGTACGTTGCTCGAATTCCTTCCGGGTTTGAAGGTATGCAGTCAAAGTCAGAAACCAATAATCAGCTCCAATCTGATCCAAATGGTGCTCCATCCACGACTATCTATTACGAACCCTGGTGCAGTTCTATGGGGTACAGTCCTTTTCCGTTACCTGTGGTTGGGGGAAATGCTTCCAGTTCGACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAACGACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCTCATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTCTCATCCAATTTGCCAGCTATGCACGGTGAAAGTCTGACACAGTCGACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGGGGAATGATGGCTTTCTATGGTCATCAGCCCGTGGGCTATCCTATGGTCGGAGCGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCCGAGGCTGAAAAGAAGTTGATAAAAGCTAGAAAGCCATACCTTCACGAGTCTAGACACCAGCATGCCATAAGAAGGTCGAGGAGCAGTGGAGGGCGTTTTGCGAAGAAAAATGAAGCTGATGGAAAGGAGAGTTCTGAACAGCAGCACGGAAGCTCCTTGACAATCAAGGCCTCTGAGTAGCAACCTGCACCAGCCACTGGAGGTGAACGCCAAGACAATGACCAAAATTGGATCAGGGGGACGGGGGATCGTCGATCGCTTGTTCGTGCTTGTTTGTGCTTGTTTGTTGAAGTATTACTGCGTTCCTGGCAAGCGCGCTAGGCGGCAAATCATTCTTGGCTTTGATCTGTTGTTGTTGTGAAGGGGTAATAAAAGAAAGAATGTGGAATGATATGTGTGACTCGCAGGATTAGTTGAAAGTCCAAGAGCTTTCTTCATTCCACTCTTCTTGTTTGCCTTTTATTGTACAGAGTTTGTGGGAACTTTGACCTCTTGTATTGTATAGTAGGAGTGAAACTAAATGAATCTTAAGGCTTAGGAAACTTATAGATTGTTATTCACAAAGCTTACGCTTTAAAAGATTTTAGTTTTTAATATCCAAAGTTGGAATATTATTGGTGCGTGCGGGTGCGGATTACTTTTAGT

Coding sequence (CDS)

ATGTTTAGTCGAATTGACCCAAATAATATTTTGTACGTTGCTCGAATTCCTTCCGGGTTTGAAGGTATGCAGTCAAAGTCAGAAACCAATAATCAGCTCCAATCTGATCCAAATGGTGCTCCATCCACGACTATCTATTACGAACCCTGGTGCAGTTCTATGGGGTACAGTCCTTTTCCGTTACCTGTGGTTGGGGGAAATGCTTCCAGTTCGACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAACGACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCTCATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTCTCATCCAATTTGCCAGCTATGCACGGTGAAAGTCTGACACAGTCGACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGGGGAATGATGGCTTTCTATGGTCATCAGCCCGTGGGCTATCCTATGGTCGGAGCGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCCGAGGCTGAAAAGAAGTTGATAAAAGCTAGAAAGCCATACCTTCACGAGTCTAGACACCAGCATGCCATAAGAAGGTCGAGGAGCAGTGGAGGGCGTTTTGCGAAGAAAAATGAAGCTGATGGAAAGGAGAGTTCTGAACAGCAGCACGGAAGCTCCTTGACAATCAAGGCCTCTGAGTAG

Protein sequence

MFSRIDPNNILYVARIPSGFEGMQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE

Homology

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BLAST of CmoCh10G009720 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-47
Identity = 121/262 (46.18%), Postives = 167/262 (63.74%), Query Frame = 0


Query: 23  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGS 82
           MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 83  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLT 142
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 143 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPV 202
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 203 FVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEAD 262
           +VNAKQY+GILRRR+ARAKAE E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 263 GKESS---EQQHGSSLTIKASE 279
             E +   +++ GS+     SE
Sbjct: 241 AGEDAGGRDRERGSATNSSGSE 256

[Close]

BLAST of CmoCh10G009720 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-47
Identity = 129/258 (50.00%), Postives = 161/258 (62.40%), Query Frame = 0


Query: 19  GFEGMQSKSET-NNQLQSDPNGAPSTTI-YYEPWCSSMGYSPFPLPVVGGNASS-STSLE 78
           G E M SKS++  N++ S+ +G  S++I    PW  +         V  G+ SS S +L 
Sbjct: 2   GIEDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALA 61

Query: 79  FPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMH 138
                 ESN  +S SN D     + V+KE Q T SP SAG Y    Q+  H     P  H
Sbjct: 62  L-----ESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPH 121

Query: 139 GESLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIE 198
                     +LVGH++  A SNPYQDPYY G+M  YGH P+G+ P  G PH+RMPLP E
Sbjct: 122 P---------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPE 181

Query: 199 IAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFA 258
           +AQ+PVFVNAKQYQ ILRRRQARAKAE EKKLIK+RKPYLHESRHQHA+RR R +GGRFA
Sbjct: 182 MAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFA 240

Query: 259 KK--NEADGKESSEQQHG 270
           KK   EA  +++ E+ +G
Sbjct: 242 KKTNTEASKRKAEEKSNG 240

[Close]

BLAST of CmoCh10G009720 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.9e-23
Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 115 GSYRQDAQKMQHVSSNLP-AMHGESLTQSTQLELVG--HSIACASNPYQDPYYGGMMA-- 174
           GS+ +  Q+  H    +P A + ES+  S      G  +S+A    PY DPYY  + A  
Sbjct: 13  GSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAPP 72

Query: 175 FYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKAR 234
              +  V   ++G     +PLP +  ++PVFVNAKQY GILRRRQ+RA+ E++ K+IK+R
Sbjct: 73  PQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSR 132

Query: 235 KPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKESSEQQ 268
           KPYLHESRH HAIRR R  GGRF  AKK +   ++SS ++
Sbjct: 133 KPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHEE 172

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BLAST of CmoCh10G009720 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.7e-23
Identity = 73/156 (46.79%), Postives = 89/156 (57.05%), Query Frame = 0


Query: 118 RQDAQKMQHVSSNLPAMHGESL-TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPV 177
           R D+Q    V S       ES+ T S   E + H +     PY DPYY  + A   + P 
Sbjct: 20  RPDSQTRPQVPS---GRSSESIDTNSVYSEPMAHGL----YPYPDPYYRSVFAQQAYLPH 79

Query: 178 GYP-----MVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKP 237
            YP     ++G     +PL  +  ++PVFVNAKQY GILRRRQ+RAK EA  + IKA+KP
Sbjct: 80  PYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKP 139

Query: 238 YLHESRHQHAIRRSRSSGGRF--AKKNEADGKESSE 266
           Y+HESRH HAIRR R  GGRF  AKK   D KE  E
Sbjct: 140 YMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEE 168

[Close]

BLAST of CmoCh10G009720 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 5.9e-19
Identity = 90/272 (33.09%), Postives = 134/272 (49.26%), Query Frame = 0


Query: 31  NQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVS 90
           +Q+ +  + A  +T+ Y    +S+ +   P   V     S+ SL       +S  G   +
Sbjct: 3   HQMLNKKDSATHSTLPY--LNTSISWGVVPTDSVANRRGSAESLSLK---VDSRPGHIQT 62

Query: 91  NNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLTQ-------ST 150
              ++ ++ D S   Q+TG  ++  +   D    + +S    A  G  +TQ         
Sbjct: 63  TKQISFQDQD-SSSTQSTGQSYTEVASSGDDNPSRQIS--FSAKSGSEITQRKGFASNPK 122

Query: 151 QLELVG----HSIACASN---PYQDPYYGGMMA--FYGHQPVGYP-MVGAPHARMPLPIE 210
           Q  + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E
Sbjct: 123 QGSMTGFPNIHFAPAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAE 182

Query: 211 IAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRF 270
           + + DPVFVNAKQY  I+RRRQ RAK EA+ KLI+ARKPYLHESRH HA++R R SGGRF
Sbjct: 183 LTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRF 242

Query: 271 -------AKKNEADGKESSEQQHGSSLTIKAS 278
                   +  +A  +E  + + G  +  K +
Sbjct: 243 LNTKKLLQESEQAAAREQEQDKLGQQVNRKTN 266

[Close]

BLAST of CmoCh10G009720 vs. ExPASy TrEMBL
Match: A0A6J1H9E2 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111461751 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.4e-137
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 23  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSE 82
           MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 83  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLTQS 142
           SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLTQS
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLTQS 120

Query: 143 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVN 202
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 203 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE 262
           AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE 240

Query: 263 SSEQQHGSSLTIKASE 279
           SSEQQHGSSLTIKASE
Sbjct: 241 SSEQQHGSSLTIKASE 256

[Close]

BLAST of CmoCh10G009720 vs. ExPASy TrEMBL
Match: A0A6J1JCE0 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111485506 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.6e-136
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 23  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSE 82
           MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 83  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLTQS 142
           SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGE LTQS
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGECLTQS 120

Query: 143 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVN 202
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 203 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE 262
           AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE 240

Query: 263 SSEQQHGSSLTIKASE 279
           SSEQQHGSSLTIKASE
Sbjct: 241 SSEQQHGSSLTIKASE 256

[Close]

BLAST of CmoCh10G009720 vs. ExPASy TrEMBL
Match: A0A1S3BP85 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.5e-122
Identity = 242/292 (82.88%), Postives = 250/292 (85.62%), Query Frame = 0


Query: 5   IDPNNILYVARIPSGF---EGMQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPL 64
           +D N+   +     GF   EGMQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPL
Sbjct: 1   MDDNSCASLGFFQGGFERVEGMQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPL 60

Query: 65  PVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDA 124
           PVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD 
Sbjct: 61  PVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDT 120

Query: 125 QKMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMV 184
           +KMQHVSS LPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMV
Sbjct: 121 RKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMV 180

Query: 185 GAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHA 244
           G PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK IKARKPYLHESRHQHA
Sbjct: 181 GGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHA 240

Query: 245 IRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE 279
           IRRSRSSGGRFAKK+EADGKE                SEQQ GSSL  KASE
Sbjct: 241 IRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE 290

[Close]

BLAST of CmoCh10G009720 vs. ExPASy TrEMBL
Match: A0A1S3BPV3 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 6.1e-120
Identity = 236/271 (87.08%), Postives = 241/271 (88.93%), Query Frame = 0


Query: 23  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSE 82
           MQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPLPVVGGNASSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 83  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLTQS 142
           SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSS LPAMHGE LTQS
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQS 120

Query: 143 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVN 202
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMVG PHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 203 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE 262
           AKQYQGILRRRQARAKAEAEKK IKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKE 240

Query: 263 ---------------SSEQQHGSSLTIKASE 279
                           SEQQ GSSL  KASE
Sbjct: 241 KHSDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of CmoCh10G009720 vs. ExPASy TrEMBL
Match: A0A5D3D5Q2 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00430 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 6.1e-120
Identity = 236/271 (87.08%), Postives = 241/271 (88.93%), Query Frame = 0


Query: 23  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSE 82
           MQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPLPVVGGNASSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 83  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLTQS 142
           SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSS LPAMHGE LTQS
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQS 120

Query: 143 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVN 202
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMVG PHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 203 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE 262
           AKQYQGILRRRQARAKAEAEKK IKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKE 240

Query: 263 ---------------SSEQQHGSSLTIKASE 279
                           SEQQ GSSL  KASE
Sbjct: 241 KHSDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of CmoCh10G009720 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 191.4 bits (485), Expect = 9.5e-49
Identity = 121/262 (46.18%), Postives = 167/262 (63.74%), Query Frame = 0


Query: 23  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGS 82
           MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 83  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLT 142
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 143 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPV 202
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 203 FVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEAD 262
           +VNAKQY+GILRRR+ARAKAE E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 263 GKESS---EQQHGSSLTIKASE 279
             E +   +++ GS+     SE
Sbjct: 241 AGEDAGGRDRERGSATNSSGSE 256

[Close]

BLAST of CmoCh10G009720 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 191.4 bits (485), Expect = 9.5e-49
Identity = 121/262 (46.18%), Postives = 167/262 (63.74%), Query Frame = 0


Query: 23  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGS 82
           MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 83  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMHGESLT 142
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 143 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPV 202
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 203 FVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEAD 262
           +VNAKQY+GILRRR+ARAKAE E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 263 GKESS---EQQHGSSLTIKASE 279
             E +   +++ GS+     SE
Sbjct: 241 AGEDAGGRDRERGSATNSSGSE 256

[Close]

BLAST of CmoCh10G009720 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-48
Identity = 127/267 (47.57%), Postives = 168/267 (62.92%), Query Frame = 0


Query: 23  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGS 82
           MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 83  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPA-----MH 142
           ESND  S S +  +N E D   K+ QA      A S R D   M+    N PA     MH
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA------ATSSRSDNHGME---GNDPALSIRNMH 120

Query: 143 GESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEI 202
            + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++
Sbjct: 121 DQPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDM 180

Query: 203 AQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAK 262
           AQ+PV+VNAKQY+GILRRR+ARAKAE E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAK
Sbjct: 181 AQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK 240

Query: 263 KNEADGKESS---EQQHGSSLTIKASE 279
           K+E +  E +   +++ GS+     SE
Sbjct: 241 KSEVEAGEDAGGRDRERGSATNSSGSE 255

[Close]

BLAST of CmoCh10G009720 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-48
Identity = 127/267 (47.57%), Postives = 168/267 (62.92%), Query Frame = 0


Query: 23  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGS 82
           MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 83  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPA-----MH 142
           ESND  S S +  +N E D   K+ QA      A S R D   M+    N PA     MH
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA------ATSSRSDNHGME---GNDPALSIRNMH 120

Query: 143 GESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEI 202
            + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++
Sbjct: 121 DQPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDM 180

Query: 203 AQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAK 262
           AQ+PV+VNAKQY+GILRRR+ARAKAE E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAK
Sbjct: 181 AQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK 240

Query: 263 KNEADGKESS---EQQHGSSLTIKASE 279
           K+E +  E +   +++ GS+     SE
Sbjct: 241 KSEVEAGEDAGGRDRERGSATNSSGSE 255

[Close]

BLAST of CmoCh10G009720 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-48
Identity = 129/258 (50.00%), Postives = 161/258 (62.40%), Query Frame = 0


Query: 19  GFEGMQSKSET-NNQLQSDPNGAPSTTI-YYEPWCSSMGYSPFPLPVVGGNASS-STSLE 78
           G E M SKS++  N++ S+ +G  S++I    PW  +         V  G+ SS S +L 
Sbjct: 2   GIEDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALA 61

Query: 79  FPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLPAMH 138
                 ESN  +S SN D     + V+KE Q T SP SAG Y    Q+  H     P  H
Sbjct: 62  L-----ESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPH 121

Query: 139 GESLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIE 198
                     +LVGH++  A SNPYQDPYY G+M  YGH P+G+ P  G PH+RMPLP E
Sbjct: 122 P---------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPE 181

Query: 199 IAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFA 258
           +AQ+PVFVNAKQYQ ILRRRQARAKAE EKKLIK+RKPYLHESRHQHA+RR R +GGRFA
Sbjct: 182 MAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFA 240

Query: 259 KK--NEADGKESSEQQHG 270
           KK   EA  +++ E+ +G
Sbjct: 242 KKTNTEASKRKAEEKSNG 240

The following BLAST results are available for this feature:

BLAST of CmoCh10G009720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	1.3e-47	46.18	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	3.0e-47	50.00	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	3.9e-23	44.38	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	6.7e-23	46.79	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	5.9e-19	33.09	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CmoCh10G009720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9E2	9.4e-137	100.00	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JCE0	3.6e-136	99.61	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114855...	[more]
A0A1S3BP85	6.5e-122	82.88	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A1S3BPV3	6.1e-120	87.08	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A5D3D5Q2	6.1e-120	87.08	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CmoCh10G009720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.1	9.5e-49	46.18	nuclear factor Y, subunit A1	[more]
AT5G12840.3	9.5e-49	46.18	nuclear factor Y, subunit A1	[more]
AT5G12840.2	1.6e-48	47.57	nuclear factor Y, subunit A1	[more]
AT5G12840.4	1.6e-48	47.57	nuclear factor Y, subunit A1	[more]
AT3G20910.1	2.1e-48	50.00	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 229..252 score: 74.77 coord: 198..220 score: 74.15
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 194..255 e-value: 3.9E-34 score: 129.4
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 198..252 e-value: 1.8E-25 score: 89.3
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 55..271
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 195..255 score: 34.731331
None	No IPR available	GENE3D	6.10.250.2430		coord: 195..257 e-value: 1.9E-28 score: 100.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..126
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 55..271
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 200..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G009720.1	CmoCh10G009720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity