CmoCh10G009160 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G009160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	IQ domain-containing protein IQM2-like
Location	Cmo_Chr10: 4541273 .. 4544063 (+)
RNA-Seq Expression	CmoCh10G009160
Synteny	CmoCh10G009160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTTTCTTTTCCTGCCCTTTGGCTAAATACATTGATGTGGAAAATGGTTTAGAATCCATTACTGTGAAATCCATCAGTTTCGGAGACGACAAAGTAAAAACTCCGGTCCGATCCATCAGTTTCAATAGTAGAGATTTGGAGCCTATGGTAATGAAATCGGTCGGTTCAGGGAAGATGACATTAGAAATATCCGTTAGCTTCAAACGTAGAGAGTTGGAGAAGATGGTATCACTAGAGGAAAACTTGCTTGTTGTAGCTGATAGTCCAAAGAGCAAAGAGATGGAGATTCAATCTCCTAGATCGGAGTGTCGTGATCGAGATGAGATCAAAACGACGACGAATTCGAAGCATATGGCTGCAATGAAATTGCAGAAAGTTTATAAAAGTTTCAGAACCAGGAGGAAGCTAGCAGATTGTGCTGTTCTTGTAGAACAGAGTTGGTATGTGTTCTTGCTTGTGTCTTTGTTCTTGATCTATATTGAGCTTGTTCACAATTGTTGTCTTTGTTTCAGGTGGAAACTCTTGGATTTCGCTGAGCTCAAGAGGAGCTCGATATCGTTTTTCGACATAGAGAAACACGAGACTGCCATTTCGCGGTGGGCTCGAGCTAGAACCAAAGCTGCCAAGGTAAACTTCCGACATGTTTTTATCAGCTCTTGTCATGAACCTACGAACACCTCGAAAGTTTCTAACCATATGTCATAAAACATCATTACAGGTCGGAAAAGGCTTGTCCAAAAACGACAAAGGTCAAAAGCTTGCTTTACAACACTGGCTTGAGGCTGTAAGTATATCGAATTCGAGACAGAGATTGTTACATAGTTCCGGTTTTCGGTCCCCAACTCGGCATCGCTAATTATTATGTCTATTTCTTTCGACAGATCGATCCACGACATCGATATGGCCATAACTTACAATTCTATTATGCTAAATGGCTTCATTGTCAGAGTGGACAACCCTTTTTCTATTGGTAAACATTCTTTGATCTAAATTTTGAAGCATCATTACTAGAACTCGGGTTTTCGAGAAACTAAAAGTTTCGAGTTAAACAGGTTGGATATAGGAGAAGGAAAGGAAGTGAATCTTGTTGAACAGTGCCCGAGATCGAAACTTCAACAACAGTGTATCAAGTACTTGGGTCCGGTGAGTCCTTAAAACCCGAGTCGAAACGTTATTTATTTGCGTAATTTGTGTTATATATGGAATGTTGACTCATCCACATGTTTTTCTTTCAGCTGGAAAGAATGGCTTATGAAGTTGTTGTGGAAGATGGGAAGTTCATGTATAAGCTATCGAGGGAGCTCCTTGACACGACCGGAGTCGATAAGCATGTGAAGTGGATATTTGTTCTCAGCACCTCTAAATCGTTGTACGTTGGCAAGAAACAGAAGGGTATGTTTCAGCATTCGAGTTTCTTGGCCGGAGGAGCCACGTCCGCTGCTGGAAGATTGGTTGTCGAAAATGGGATCCTAAAGGTATAAGTCATAGAGCTTGTAGAATTTTCGTTCTTCGTTTCCCTTGTGAGTTCCTACCATGTAAATAGCTTGTCTTTGTTCTTCGTTCTTCGTTCTTCGTTCTTCGTTCTTCGTTCTTCGTTTCCCTAAAGGTATAAGTCATAGAGCTCGTAGAATGTTTGTTCTTTGTTTCCCTCGTGAGTTCCTACCATGTAAATAGCTTATCTTCATTCTTCGTTCTTTGTTTCCCTAAAGGTACAAGTTATAGAGCTCGTAGAATTTTCGTTCTTTGTTTCCCTCGTGAGTTCCCACCATGTAAATAGCTTATCTTCGTTCTTCGTTCTTCATTCTTCGTTCTTCGTTCTTCGTTTTTTGTTCTTCGTTTCCCTAAAGGTACAAGTCATAGAGCTTATAGAATTTTTGTTCTTCGTTTCCCTCATGAGTTCCTACCATGTAAATAGCTTATCTTCAACCTTAAAAACGTTCGTTTAACGAAGATTCACCGTCTTTTGAACAGGCAGTTTGGCCTCATAGCGGTCATTACCGTCCCACGGAAGAAAACTTTCAGGAATTCATCTCTTTCCTTACAGAAAACAACGTCAACCTCACTGATGTAAAGGTAAGAATTGGAAAACAAACCTCTAAGATGTTCTTTTCCTAATGAAATCAATGCATAGATTGACATGGTTTTTGTTTGTTTGGTTAAACTCAGATGAGTCCAGATGAAGAAGAAGACAATGGACTACAAATGCCAAAGAACAGTCACCATGTTCGATTCGGCTCAACCGAGGAAGATTGGGTTCAAAAGTTGAGTGGTGGTCGAGACGACGACATAGCAGAGCTCATTGCTGAAGAAATAACTGACAAGAACTCGAGCACGTCGACTGCCAAGCTGTTCGAGCCAAAGAGGTCGATCAACCTGAGTAGAAAACTAACCAATCTTCACATACCAGATCGAGGTAACCTGATCGAGAAACTCGAGATGGAAAATAAGTTAGAAGAGGGGAATAGAAGTTGTGAAGTTGAGATCATCCCTGATGAATCAATACTGAAAAGAATAAACTCACACAAAGAAACCAAATCATACCAACTGGGAAGGCAGCTATCCTGCAAATGGACAACGGGTGCAGGTCCCCGAATCGGGTGCGTTCGTGACTATCCCGTCGAGCTTCAGCTCCGAGCAATGGAGCAGGTGAGCTTGTCGCCAAGAATGGTGGCTGCTCGGTCCGAAATTCAATGCTCGCCTCGGATCGCCAGTATGCTGAGCCCAAGGGTGTGCAGGGCAGTTGACATGATTCACCAAAGTAATCCACAAACTTGTTCCACAGTTG

mRNA sequence

ATGGGGGCTTTCTTTTCCTGCCCTTTGGCTAAATACATTGATGTGGAAAATGGTTTAGAATCCATTACTGTGAAATCCATCAGTTTCGGAGACGACAAAGTAAAAACTCCGGTCCGATCCATCAGTTTCAATAGTAGAGATTTGGAGCCTATGGTAATGAAATCGGTCGGTTCAGGGAAGATGACATTAGAAATATCCGTTAGCTTCAAACGTAGAGAGTTGGAGAAGATGGTATCACTAGAGGAAAACTTGCTTGTTGTAGCTGATAGTCCAAAGAGCAAAGAGATGGAGATTCAATCTCCTAGATCGGAGTGTCGTGATCGAGATGAGATCAAAACGACGACGAATTCGAAGCATATGGCTGCAATGAAATTGCAGAAAGTTTATAAAAGTTTCAGAACCAGGAGGAAGCTAGCAGATTGTGCTGTTCTTGTAGAACAGAGTGGAAACTCTTGGATTTCGCTGAGCTCAAGAGGAGCTCGATATCGTTTTTCGACATAGAGAAACACGAGACTGCCATTTCGCGGTGGGCTCGAGCTAGAACCAAAGCTGCCAAGGTCGGAAAAGGCTTGTCCAAAAACGACAAAGGTCAAAAGCTTGCTTTACAACACTGGCTTGAGGCTATCGATCCACGACATCGATATGGCCATAACTTACAATTCTATTATGCTAAATGGCTTCATTGTCAGAGTGGACAACCCTTTTTCTATTGGTTGGATATAGGAGAAGGAAAGGAAGTGAATCTTGTTGAACAGTGCCCGAGATCGAAACTTCAACAACAGTGTATCAAGTACTTGGGTCCGCTGGAAAGAATGGCTTATGAAGTTGTTGTGGAAGATGGGAAGTTCATGTATAAGCTATCGAGGGAGCTCCTTGACACGACCGGAGTCGATAAGCATGTGAAGTGGATATTTGTTCTCAGCACCTCTAAATCGTTGTACGTTGGCAAGAAACAGAAGGGTATGTTTCAGCATTCGAGTTTCTTGGCCGGAGGAGCCACGTCCGCTGCTGGAAGATTGGTTGTCGAAAATGGGATCCTAAAGGCAGTTTGGCCTCATAGCGGTCATTACCGTCCCACGGAAGAAAACTTTCAGGAATTCATCTCTTTCCTTACAGAAAACAACGTCAACCTCACTGATGTAAAGATGAGTCCAGATGAAGAAGAAGACAATGGACTACAAATGCCAAAGAACAGTCACCATGTTCGATTCGGCTCAACCGAGGAAGATTGGGTTCAAAAGTTGAGTGGTGGTCGAGACGACGACATAGCAGAGCTCATTGCTGAAGAAATAACTGACAAGAACTCGAGCACGTCGACTGCCAAGCTGTTCGAGCCAAAGAGGTCGATCAACCTGAGTAGAAAACTAACCAATCTTCACATACCAGATCGAGGTAACCTGATCGAGAAACTCGAGATGGAAAATAAGTTAGAAGAGGGGAATAGAAGTTGTGAAGTTGAGATCATCCCTGATGAATCAATACTGAAAAGAATAAACTCACACAAAGAAACCAAATCATACCAACTGGGAAGGCAGCTATCCTGCAAATGGACAACGGGTGCAGGTCCCCGAATCGGGTGCGTTCGTGACTATCCCGTCGAGCTTCAGCTCCGAGCAATGGAGCAGGTGAGCTTGTCGCCAAGAATGGTGGCTGCTCGGTCCGAAATTCAATGCTCGCCTCGGATCGCCAGTATGCTGAGCCCAAGGGTGTGCAGGGCAGTTGACATGATTCACCAAAGTAATCCACAAACTTGTTCCACAGTTG

Coding sequence (CDS)

ATGGGGGCTTTCTTTTCCTGCCCTTTGGCTAAATACATTGATGTGGAAAATGGTTTAGAATCCATTACTGTGAAATCCATCAGTTTCGGAGACGACAAAGTAAAAACTCCGGTCCGATCCATCAGTTTCAATAGTAGAGATTTGGAGCCTATGGTAATGAAATCGGTCGGTTCAGGGAAGATGACATTAGAAATATCCGTTAGCTTCAAACGTAGAGAGTTGGAGAAGATGGTATCACTAGAGGAAAACTTGCTTGTTGTAGCTGATAGTCCAAAGAGCAAAGAGATGGAGATTCAATCTCCTAGATCGGAGTGTCGTGATCGAGATGAGATCAAAACGACGACGAATTCGAAGCATATGGCTGCAATGAAATTGCAGAAAGTTTATAAAAGTTTCAGAACCAGGAGGAAGCTAGCAGATTGTGCTGTTCTTGTAGAACAGAGTGGAAACTCTTGGATTTCGCTGAGCTCAAGAGGAGCTCGATATCGTTTTTCGACATAG

Protein sequence

MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQSGNSWISLSSRGARYRFST

Homology

[Close]

BLAST of CmoCh10G009160 vs. ExPASy Swiss-Prot
Match: Q9LHN9 (IQ domain-containing protein IQM2 OS=Arabidopsis thaliana OX=3702 GN=IQM2 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.3e-33
Identity = 85/151 (56.29%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 1   MGAFFSCPLAKYIDVENGLESITVKSISFG-DDKVKTPVRSISFNSRDLEPMVMKSVGSG 60
           MG  FSCP A+  DVE  L+S+TVKSISFG DD+ KTP RS++FN   LEP ++KS+GSG
Sbjct: 1   MGVSFSCPFAEQDDVEAALDSVTVKSISFGDDDECKTPKRSVNFNDGTLEPTILKSMGSG 60

Query: 61  KMTLEISVSFKRRELEKMVSLEENLLVVADS--PKSKEMEIQSPRSECRDRDEIKTTTNS 120
           KM +E SVS K  +LE+M+SL  +   V D+    +KE  +  PR             N 
Sbjct: 61  KMVVEKSVSLKGMQLERMISLNRS---VKDNGFEIAKEFSVLDPR-------------NP 120

Query: 121 KHMAAMKLQKVYKSFRTRRKLADCAVLVEQS 149
           KH AA+KLQKVYKSFRTRRKLADCAVLVEQS
Sbjct: 121 KHEAAIKLQKVYKSFRTRRKLADCAVLVEQS 135

[Close]

BLAST of CmoCh10G009160 vs. ExPASy Swiss-Prot
Match: Q9M2G8 (IQ domain-containing protein IQM6 OS=Arabidopsis thaliana OX=3702 GN=IQM6 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-07
Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 33  KVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMV--SLEENL----LV 92
           + KT +RSISFN  D +  + +S  + K     S+S K  +  ++    +E N     L 
Sbjct: 2   ETKTILRSISFNDIDSDSTITESPEARKTLYNRSLSGKGTQRSRISPGDVENNFSIKPLT 61

Query: 93  VADSPKSKEMEIQSPRSECRDRDEIKTTT--NSKHMAAMKLQKVYKSFRTRRKLADCAVL 148
                   +M I  P  E     E       +  + AA+KLQKVY+SFRTRR+LADCAV+
Sbjct: 62  FMKEDDRYKMRIWKPVCENEHAKEFLALLLGDGTYQAALKLQKVYRSFRTRRRLADCAVV 121

[Close]

BLAST of CmoCh10G009160 vs. ExPASy Swiss-Prot
Match: Q058N0 (IQ domain-containing protein IQM5 OS=Arabidopsis thaliana OX=3702 GN=IQM5 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.4e-04
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 121 AAMKLQKVYKSFRTRRKLADCAVLVEQ 148
           AA+ LQKVYKS+RTRR LADCAV+VE+
Sbjct: 134 AAVTLQKVYKSYRTRRNLADCAVVVEE 160

[Close]

BLAST of CmoCh10G009160 vs. ExPASy Swiss-Prot
Match: O64851 (IQ domain-containing protein IQM4 OS=Arabidopsis thaliana OX=3702 GN=IQM4 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.3e-04
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 121 AAMKLQKVYKSFRTRRKLADCAVLVEQ 148
           AA  LQKVYKS+RTRR LADCAV+VE+
Sbjct: 139 AATTLQKVYKSYRTRRNLADCAVVVEE 165

[Close]

BLAST of CmoCh10G009160 vs. ExPASy TrEMBL
Match: A0A6J1HCZ6 (IQ domain-containing protein IQM2-like OS=Cucurbita moschata OX=3662 GN=LOC111461708 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.7e-73
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGK 60
           MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGK
Sbjct: 1   MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGK 60

Query: 61  MTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDEIKTTTNSKHM 120
           MTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDEIKTTTNSKHM
Sbjct: 61  MTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDEIKTTTNSKHM 120

Query: 121 AAMKLQKVYKSFRTRRKLADCAVLVEQS 149
           AAMKLQKVYKSFRTRRKLADCAVLVEQS
Sbjct: 121 AAMKLQKVYKSFRTRRKLADCAVLVEQS 148

[Close]

BLAST of CmoCh10G009160 vs. ExPASy TrEMBL
Match: A0A6J1JC14 (IQ domain-containing protein IQM2-like OS=Cucurbita maxima OX=3661 GN=LOC111485411 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.5e-70
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGK 60
           MGAFFSCPLAKYIDVENGLESITVKSISFGDD+VKTPVRSISFNSRDLEPMVMKSVGSGK
Sbjct: 1   MGAFFSCPLAKYIDVENGLESITVKSISFGDDEVKTPVRSISFNSRDLEPMVMKSVGSGK 60

Query: 61  MTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDEIKTTTNSKHM 120
           MTLEISVSFKRRELEKMVSLEENL VVADSPKSKEMEIQSPR ECRD DE+KTTTNSKHM
Sbjct: 61  MTLEISVSFKRRELEKMVSLEENLFVVADSPKSKEMEIQSPRLECRDCDEVKTTTNSKHM 120

Query: 121 AAMKLQKVYKSFRTRRKLADCAVLVEQS 149
           AAMKLQKVYKSFRTRRKLADCAVLVEQS
Sbjct: 121 AAMKLQKVYKSFRTRRKLADCAVLVEQS 148

[Close]

BLAST of CmoCh10G009160 vs. ExPASy TrEMBL
Match: A0A1S3BNY0 (IQ domain-containing protein IQM2-like OS=Cucumis melo OX=3656 GN=LOC103491957 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.7e-59
Identity = 132/160 (82.50%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 1   MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGK 60
           MGAFFSCPLAKYIDVENGLESITVKSISFGDD+VKTPVRSISFNSRDLEPM+MKSVGSG+
Sbjct: 1   MGAFFSCPLAKYIDVENGLESITVKSISFGDDEVKTPVRSISFNSRDLEPMIMKSVGSGR 60

Query: 61  MTLEISVSFKRRELEKMVS-------LEENLLVVADSPKSKEMEIQSPRSECRDRDEIKT 120
           M+LE SVSFKRRELEKMVS       LE+ LLVVA SPKSKEME QSPRS   D D IK 
Sbjct: 61  MSLETSVSFKRRELEKMVSMEAEAVPLEDKLLVVAGSPKSKEMENQSPRSASHDHDGIKM 120

Query: 121 T-----TNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS 149
           T     TN KHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Sbjct: 121 TMDLNPTNPKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS 160

[Close]

BLAST of CmoCh10G009160 vs. ExPASy TrEMBL
Match: A0A0A0M0B9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629780 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.4e-57
Identity = 130/160 (81.25%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 1   MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGK 60
           MGAFFSCPLAKYIDVENGLES+TVKSISFGDD+VKTPVRSISFNSRDLEPM+MKSVGSG+
Sbjct: 33  MGAFFSCPLAKYIDVENGLESVTVKSISFGDDEVKTPVRSISFNSRDLEPMIMKSVGSGR 92

Query: 61  MTLEISVSFKRRELEKMVS-------LEENLLVVADSPKSKEMEIQSPRSECRDRDEIKT 120
           MTLE SVSFKRRELEK+VS       LE+ LLVVADSPKSK ME QSPRSE  + D IK 
Sbjct: 93  MTLETSVSFKRRELEKVVSMEAGAVPLEDKLLVVADSPKSKVMENQSPRSE--NHDGIKM 152

Query: 121 T-----TNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS 149
           T     TN KH+AAMKLQKVYKSFRTRRKLADCAVLVEQS
Sbjct: 153 TMDLNPTNPKHIAAMKLQKVYKSFRTRRKLADCAVLVEQS 190

[Close]

BLAST of CmoCh10G009160 vs. ExPASy TrEMBL
Match: A0A6J1DIB2 (IQ domain-containing protein IQM2-like OS=Momordica charantia OX=3673 GN=LOC111020762 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.0e-53
Identity = 122/160 (76.25%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 1   MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGK 60
           MGAFFSCP A+Y+DVENGLESITVKSISFGDD+VKTPVRS+SFN RDLEPM+MKSVGSG+
Sbjct: 1   MGAFFSCPFARYVDVENGLESITVKSISFGDDEVKTPVRSVSFNGRDLEPMIMKSVGSGR 60

Query: 61  MTLEISVSFKRRELEKMVSL-------EENLLVVADSPKSKEM--EIQSPRSECRDRDEI 120
           M LE SVSFK RELEKMVS+       EE L VVA SPKSKEM  EIQSPRSE  D  + 
Sbjct: 61  MMLETSVSFKGRELEKMVSMEGVAVPQEEELNVVAKSPKSKEMEKEIQSPRSESHDGIQT 120

Query: 121 KT---TTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS 149
            T    TN +H+AAMKLQKVYKSFRTRRKLADCAVLVEQS
Sbjct: 121 TTDLGPTNPEHIAAMKLQKVYKSFRTRRKLADCAVLVEQS 160

[Close]

BLAST of CmoCh10G009160 vs. TAIR 10
Match: AT3G13600.1 (calmodulin-binding family protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-34
Identity = 85/151 (56.29%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 1   MGAFFSCPLAKYIDVENGLESITVKSISFG-DDKVKTPVRSISFNSRDLEPMVMKSVGSG 60
           MG  FSCP A+  DVE  L+S+TVKSISFG DD+ KTP RS++FN   LEP ++KS+GSG
Sbjct: 1   MGVSFSCPFAEQDDVEAALDSVTVKSISFGDDDECKTPKRSVNFNDGTLEPTILKSMGSG 60

Query: 61  KMTLEISVSFKRRELEKMVSLEENLLVVADS--PKSKEMEIQSPRSECRDRDEIKTTTNS 120
           KM +E SVS K  +LE+M+SL  +   V D+    +KE  +  PR             N 
Sbjct: 61  KMVVEKSVSLKGMQLERMISLNRS---VKDNGFEIAKEFSVLDPR-------------NP 120

Query: 121 KHMAAMKLQKVYKSFRTRRKLADCAVLVEQS 149
           KH AA+KLQKVYKSFRTRRKLADCAVLVEQS
Sbjct: 121 KHEAAIKLQKVYKSFRTRRKLADCAVLVEQS 135

[Close]

BLAST of CmoCh10G009160 vs. TAIR 10
Match: AT3G58480.1 (calmodulin-binding family protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-08
Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 33  KVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMV--SLEENL----LV 92
           + KT +RSISFN  D +  + +S  + K     S+S K  +  ++    +E N     L 
Sbjct: 2   ETKTILRSISFNDIDSDSTITESPEARKTLYNRSLSGKGTQRSRISPGDVENNFSIKPLT 61

Query: 93  VADSPKSKEMEIQSPRSECRDRDEIKTTT--NSKHMAAMKLQKVYKSFRTRRKLADCAVL 148
                   +M I  P  E     E       +  + AA+KLQKVY+SFRTRR+LADCAV+
Sbjct: 62  FMKEDDRYKMRIWKPVCENEHAKEFLALLLGDGTYQAALKLQKVYRSFRTRRRLADCAVV 121

[Close]

BLAST of CmoCh10G009160 vs. TAIR 10
Match: AT5G57010.1 (calmodulin-binding family protein )

HSP 1 Score: 45.8 bits (107), Expect = 3.9e-05
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 121 AAMKLQKVYKSFRTRRKLADCAVLVEQ 148
           AA+ LQKVYKS+RTRR LADCAV+VE+
Sbjct: 134 AAVTLQKVYKSYRTRRNLADCAVVVEE 160

[Close]

BLAST of CmoCh10G009160 vs. TAIR 10
Match: AT2G26190.1 (calmodulin-binding family protein )

HSP 1 Score: 45.1 bits (105), Expect = 6.6e-05
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 121 AAMKLQKVYKSFRTRRKLADCAVLVEQ 148
           AA  LQKVYKS+RTRR LADCAV+VE+
Sbjct: 139 AATTLQKVYKSYRTRRNLADCAVVVEE 165

[Close]

BLAST of CmoCh10G009160 vs. TAIR 10
Match: AT4G33050.3 (calmodulin-binding family protein )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 38/105 (36.19%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 58  SGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDEIKTTT-- 117
           S K T+E S+SF   E+ K    + +  V+ ++ KS    +     E   R +IK  T  
Sbjct: 35  SPKSTMERSLSFNSWEVPKETKTDSDFEVL-ETKKSTPNTLNGRNCE---RIQIKKPTVT 94

Query: 118 -------------NSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQ 148
                             AA  LQKVYKS+RTRR LADCAV+VE+
Sbjct: 95  PPEPFVFFSPRPVTELDAAATTLQKVYKSYRTRRNLADCAVVVEE 135

The following BLAST results are available for this feature:

BLAST of CmoCh10G009160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHN9	4.3e-33	56.29	IQ domain-containing protein IQM2 OS=Arabidopsis thaliana OX=3702 GN=IQM2 PE=2 S...	[more]
Q9M2G8	4.0e-07	36.59	IQ domain-containing protein IQM6 OS=Arabidopsis thaliana OX=3702 GN=IQM6 PE=2 S...	[more]
Q058N0	5.4e-04	77.78	IQ domain-containing protein IQM5 OS=Arabidopsis thaliana OX=3702 GN=IQM5 PE=2 S...	[more]
O64851	9.3e-04	77.78	IQ domain-containing protein IQM4 OS=Arabidopsis thaliana OX=3702 GN=IQM4 PE=2 S...	[more]

BLAST of CmoCh10G009160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCZ6	9.7e-73	100.00	IQ domain-containing protein IQM2-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JC14	4.5e-70	96.62	IQ domain-containing protein IQM2-like OS=Cucurbita maxima OX=3661 GN=LOC1114854...	[more]
A0A1S3BNY0	4.7e-59	82.50	IQ domain-containing protein IQM2-like OS=Cucumis melo OX=3656 GN=LOC103491957 P...	[more]
A0A0A0M0B9	3.4e-57	81.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629780 PE=4 SV=1	[more]
A0A6J1DIB2	5.0e-53	76.25	IQ domain-containing protein IQM2-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CmoCh10G009160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13600.1	3.0e-34	56.29	calmodulin-binding family protein	[more]
AT3G58480.1	2.9e-08	36.59	calmodulin-binding family protein	[more]
AT5G57010.1	3.9e-05	77.78	calmodulin-binding family protein	[more]
AT2G26190.1	6.6e-05	77.78	calmodulin-binding family protein	[more]
AT4G33050.3	2.5e-04	36.19	calmodulin-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044159	IQ domain-containing protein IQM	PANTHER	PTHR31250	IQ DOMAIN-CONTAINING PROTEIN IQM3	coord: 1..149
None	No IPR available	PANTHER	PTHR31250:SF51	IQ DOMAIN-CONTAINING PROTEIN IQM2-LIKE	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G009160.1	CmoCh10G009160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0036228	protein localization to nuclear inner membrane
biological_process	GO:0006405	RNA export from nucleus
biological_process	GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
cellular_component	GO:0044611	nuclear pore inner ring
molecular_function	GO:0017056	structural constituent of nuclear pore