CmoCh10G004700 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G004700
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	glycine-rich cell wall structural protein 2-like
Location	Cmo_Chr10: 2099687 .. 2100196 (+)
RNA-Seq Expression	CmoCh10G004700
Synteny	CmoCh10G004700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATCAACTCCCTGATTGTTGTTTGCTTCTTACTCTCTTTCTCCGTCATTCTCTCTCAAGCTCGAGTGGCCAGGAAGGATCTCGGCCTTGACCTTGGAGGACTCGGTGTTGGAATTGGAACCGGAATAGGCCTAGGCTTAGGTGGCAGTGGCTCCGGATCCGGTTCTGGATCCGGATCCGGATCCGGATCTGGCTCGAGCTCATCTTCGTCATCATCATCGTACTCCTCGAGCTCAGGCTCCGGGTCCGGAGCTGGGTCTGAAGCTGGCTCTTACGCTGGGTCTCGGGCAGGCTCAGGGTCCGGGTCCGGAGCTGGGTCTGAAGCTGGCTCTTACGCAGGGTCTCGGGCAGGCTCAGGTTCTGGGCCGAACAGGAATGGAGGCTCGGGATCTGGCTCGGGATACGGCGGAGGTTCGGGCAGAGGAAGCGGCAACGGCGGAGGTGAAGGATACGGGGAAGGTCATGGCTATGGCGAGGGTCGCGGTTATGGCGGAGGCAACTAA

mRNA sequence

ATGGCTTCAATCAACTCCCTGATTGTTGTTTGCTTCTTACTCTCTTTCTCCGTCATTCTCTCTCAAGCTCGAGTGGCCAGGAAGGATCTCGGCCTTGACCTTGGAGGACTCGGTGTTGGAATTGGAACCGGAATAGGCCTAGGCTTAGGTGGCAGTGGCTCCGGATCCGGTTCTGGATCCGGATCCGGATCCGGATCTGGCTCGAGCTCATCTTCGTCATCATCATCGTACTCCTCGAGCTCAGGCTCCGGGTCCGGAGCTGGGTCTGAAGCTGGCTCTTACGCTGGGTCTCGGGCAGGCTCAGGGTCCGGGTCCGGAGCTGGGTCTGAAGCTGGCTCTTACGCAGGGTCTCGGGCAGGCTCAGGTTCTGGGCCGAACAGGAATGGAGGCTCGGGATCTGGCTCGGGATACGGCGGAGGTTCGGGCAGAGGAAGCGGCAACGGCGGAGGTGAAGGATACGGGGAAGGTCATGGCTATGGCGAGGGTCGCGGTTATGGCGGAGGCAACTAA

Coding sequence (CDS)

ATGGCTTCAATCAACTCCCTGATTGTTGTTTGCTTCTTACTCTCTTTCTCCGTCATTCTCTCTCAAGCTCGAGTGGCCAGGAAGGATCTCGGCCTTGACCTTGGAGGACTCGGTGTTGGAATTGGAACCGGAATAGGCCTAGGCTTAGGTGGCAGTGGCTCCGGATCCGGTTCTGGATCCGGATCCGGATCCGGATCTGGCTCGAGCTCATCTTCGTCATCATCATCGTACTCCTCGAGCTCAGGCTCCGGGTCCGGAGCTGGGTCTGAAGCTGGCTCTTACGCTGGGTCTCGGGCAGGCTCAGGGTCCGGGTCCGGAGCTGGGTCTGAAGCTGGCTCTTACGCAGGGTCTCGGGCAGGCTCAGGTTCTGGGCCGAACAGGAATGGAGGCTCGGGATCTGGCTCGGGATACGGCGGAGGTTCGGGCAGAGGAAGCGGCAACGGCGGAGGTGAAGGATACGGGGAAGGTCATGGCTATGGCGAGGGTCGCGGTTATGGCGGAGGCAACTAA

Protein sequence

MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

Homology

[Close]

BLAST of CmoCh10G004700 vs. ExPASy TrEMBL
Match: A0A6J1E2L1 (cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
           MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60

Query: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120
           GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG
Sbjct: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120

Query: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 169

[Close]

BLAST of CmoCh10G004700 vs. ExPASy TrEMBL
Match: A0A6J1E1M3 (putative per-hexamer repeat protein 5 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.1e-46
Identity = 149/169 (88.17%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
           MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60

Query: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120
           GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG
Sbjct: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120

Query: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           SGSGPNRN                    GGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 SGSGPNRN--------------------GGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of CmoCh10G004700 vs. ExPASy TrEMBL
Match: A0A6J1E521 (putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 6.1e-46
Identity = 149/169 (88.17%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
           MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60

Query: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120
           GSGSGSGSSSSSSSSSYSSS                    SGSGSGAGSEAGSYAGSRAG
Sbjct: 61  GSGSGSGSSSSSSSSSYSSS--------------------SGSGSGAGSEAGSYAGSRAG 120

Query: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of CmoCh10G004700 vs. ExPASy TrEMBL
Match: A0A1S3B9N0 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487316 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 134/170 (78.82%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60
           MASI SL +VVC LLSFSV LS+ RVARKDLG+DLGGLGVG+G GIGLG+GGSGSGSGSG
Sbjct: 1   MASIKSLALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIGGSGSGSGSG 60

Query: 61  SGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRA 120
           SGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY                AGSYAGSRA
Sbjct: 61  SGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY----------------AGSYAGSRA 120

Query: 121 GSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           GSGSG NRNGGSG GSGYGGGSGRG  NG GEGYGEGHGYGEG GYGGGN
Sbjct: 121 GSGSGGNRNGGSGYGSGYGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 152

[Close]

BLAST of CmoCh10G004700 vs. ExPASy TrEMBL
Match: A0A0A0LTK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.7e-35
Identity = 136/171 (79.53%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60
           MASI SL IVVC LLSFS ILS+ RVARKDLG+DLGG+GVG+GTGIGLG+GGSGSGSGSG
Sbjct: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60

Query: 61  SGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRA 120
           SGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY                AGSYAGSRA
Sbjct: 61  SGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY----------------AGSYAGSRA 120

Query: 121 GSGSGPNRNGGSGSGSGYGGGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN 170
           GSGSG NRNGGSG GSGYGGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Sbjct: 121 GSGSGGNRNGGSGYGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 153

[Close]

BLAST of CmoCh10G004700 vs. NCBI nr
Match: XP_022921881.1 (cell wall protein IFF6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 229.6 bits (584), Expect = 2.1e-56
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
           MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60

Query: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120
           GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG
Sbjct: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120

Query: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 169

[Close]

BLAST of CmoCh10G004700 vs. NCBI nr
Match: XP_023515817.1 (cell wall protein IFF6-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.1 bits (562), Expect = 7.3e-54
Identity = 165/169 (97.63%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
           MASINSLIVVCFLLSFS I+SQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS
Sbjct: 1   MASINSLIVVCFLLSFSAIVSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60

Query: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120
           GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG
Sbjct: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120

Query: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           S SG NRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 SASGRNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 169

[Close]

BLAST of CmoCh10G004700 vs. NCBI nr
Match: KAG6589745.1 (hypothetical protein SDJN03_15168, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 215.3 bits (547), Expect = 4.0e-52
Identity = 163/169 (96.45%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
           MASINSLIVVCFLLSFSVI+SQARVARKDLGLDLGGLGVGIGTGIGLGLG    GSGSGS
Sbjct: 1   MASINSLIVVCFLLSFSVIVSQARVARKDLGLDLGGLGVGIGTGIGLGLG----GSGSGS 60

Query: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120
           GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG
Sbjct: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120

Query: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           SGSG NRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 SGSGRNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 165

[Close]

BLAST of CmoCh10G004700 vs. NCBI nr
Match: XP_022921882.1 (putative per-hexamer repeat protein 5 isoform X2 [Cucurbita moschata])

HSP 1 Score: 195.3 bits (495), Expect = 4.3e-46
Identity = 149/169 (88.17%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
           MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60

Query: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120
           GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG
Sbjct: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120

Query: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           SGSGPNRN                    GGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 SGSGPNRN--------------------GGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of CmoCh10G004700 vs. NCBI nr
Match: XP_022921883.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata])

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-45
Identity = 149/169 (88.17%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
           MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60

Query: 61  GSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAG 120
           GSGSGSGSSSSSSSSSYSSS                    SGSGSGAGSEAGSYAGSRAG
Sbjct: 61  GSGSGSGSSSSSSSSSYSSS--------------------SGSGSGAGSEAGSYAGSRAG 120

Query: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 170
           SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 SGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of CmoCh10G004700 vs. TAIR 10
Match: AT4G30460.1 (glycine-rich protein )

HSP 1 Score: 101.3 bits (251), Expect = 7.9e-22
Identity = 106/165 (64.24%), Postives = 121/165 (73.33%), Query Frame = 0


Query: 5   NSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGS 64
           +SLI++  +L+ SV++S++RVARKDLGLDLGG+G GIG GIG+G GGSGSG+G+GSGSG 
Sbjct: 8   SSLILITLILATSVLVSESRVARKDLGLDLGGIGAGIGIGIGIGGGGSGSGAGAGSGSGG 67

Query: 65  GSGSSSSSSSSSYSSSSGSGSG-AGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAGSGS 124
           G  SSSSSSSSS SSSSG G G AGSEAGSYAGS AGSGS            G R+GSG 
Sbjct: 68  GGSSSSSSSSSSSSSSSGGGGGDAGSEAGSYAGSHAGSGS------------GGRSGSG- 127

Query: 125 GPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGG 169
              R  GSG G G+GGG G G G GGG G G G GYGEG GYGGG
Sbjct: 128 ---RGRGSGGGGGHGGGGGGGGGRGGGGGSGNGEGYGEGGGYGGG 156

[Close]

BLAST of CmoCh10G004700 vs. TAIR 10
Match: AT4G30450.1 (glycine-rich protein )

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16
Identity = 68/94 (72.34%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 13  LLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGL-GGSGSGSGSGSGSGSGSGSSSS 72
           ++S  V+L+++R+ARKDLG+DLGG+G+G+G G+G+GL GGSGSG+G+GSGSGSGS SSSS
Sbjct: 14  VISSLVMLTESRLARKDLGIDLGGIGIGLGVGLGIGLGGGSGSGAGAGSGSGSGSRSSSS 73

Query: 73  SSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGS 106
           SSSSS SSSSGSG  AGS AGS+AGSRAGSGSG+
Sbjct: 74  SSSSSSSSSSGSGGSAGSSAGSFAGSRAGSGSGN 107

The following BLAST results are available for this feature:

BLAST of CmoCh10G004700 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh10G004700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2L1	1.0e-56	100.00	cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1E1M3	2.1e-46	88.17	putative per-hexamer repeat protein 5 isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1E521	6.1e-46	88.17	putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita mos...	[more]
A0A1S3B9N0	1.3e-35	78.82	glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LTK9	3.7e-35	79.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1	[more]

BLAST of CmoCh10G004700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921881.1	2.1e-56	100.00	cell wall protein IFF6-like isoform X1 [Cucurbita moschata]	[more]
XP_023515817.1	7.3e-54	97.63	cell wall protein IFF6-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6589745.1	4.0e-52	96.45	hypothetical protein SDJN03_15168, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022921882.1	4.3e-46	88.17	putative per-hexamer repeat protein 5 isoform X2 [Cucurbita moschata]	[more]
XP_022921883.1	1.3e-45	88.17	putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita mosch...	[more]

BLAST of CmoCh10G004700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30460.1	7.9e-22	64.24	glycine-rich protein	[more]
AT4G30450.1	3.8e-16	72.34	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..140
None	No IPR available	PANTHER	PTHR38934:SF13	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-RELATED	coord: 101..169
None	No IPR available	PANTHER	PTHR38934	HYPHALLY REGULATED CELL WALL PROTEIN 1	coord: 1..105 coord: 101..169
None	No IPR available	PANTHER	PTHR38934:SF13	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-RELATED	coord: 1..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G004700.1	CmoCh10G004700.1	mRNA