CmoCh10G004570 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGAGTAAAATAATTTTTTTTCTTTTTATTCTTAATATTTGAGACGACACGTGGAGGACTATTTATCCAATTGTGAACCGGTTCAGTTATGCTTCCATAGAACAGGACAAGCTATATCCATCCCGGGTTGTCGGTTCAAAGTCAACACGACCGTGCTCACCTCAGCTCACCTCAGCTCACCTCCCAGTCTCTCGTCAATCTCCCGCCTGCATCGGACCATCAAATTTCAGTCCTTGCCAGTGCGGCTGTTTAGGTACCAAACCATTCAACTGCTTCTCGCTTACTTCCTATGTCTTTGTTCTTCTTCGTCTCCTTCCTAAGTTGACTTCACTTTCTCCCACCACAAAGTTTCCAGAAGATGGGGAAATCAGTGGGGGCTGTTCTAATTTCATTTCTCTTCCTGATCTCCGTTTTCTGTATTGCGCCCTCAGGATTTGGAAACACTTTCACCTCTATATTCGATTTCTTGACTCCAAAATTCTCCTCCAATTTCCGCGGCTTTGGACCAAGGTGGGCAATTCTTGTTTTTATCCCTTTTTCTTTTACGCCCACAATTGAAGATATCCATCACGGATGAAATTTTTGAGATACTCAATTTTTGCATTCTGTCTTGAGCTGAATTTGTTATCCCTAGTGTCTGTTTGTTCTTTGAATTGAGCTAAGTGTTCGATAAAATGCGCAAATGAGAACTTTTTATGGTCAATGTGTGGTGCAGAGTATTAGTAGGAGGACATTCGCATATAGCTTCAGTGGTTAGAAGTTTGAAAATGGACACAGGGAATTATATAGAGGGGCCCTTGCTAGAGGAGTTTACATTTCCTGCCAATTCTGTTCCTTTCGACAACTGCCACGCTTCTACAATTGTGGAGGTTTGAGTTGATGGAGAAACTTCCTTTGGTCTTATAATATACTTGGGTCCTTGATTTTGTTAGGGGAGAATATGAGTGTTTTCTCTCTTCATAGAGCAGGTTGATAAAGATCATTACTTGGTTGCATATTTTGGGGGTACATTCGAGGGCGCACCGGATGTGAAGATTTGGTTGCAGACATATAAGGTAAACAACCCAACTGCATCACTCCCCAAAAATGAAAGCTTACTAAAAAAATTGTGAGTAAACAAGCATAATTTTCAAAAAGAAAACCAAGAACAAGAAGGTATCTAATTTCTTCCTTGAACGTTGATCTCTACCGTGCTACGTTTGTTTATGTCAAATCAGGCTGTTGGCCCTTTTATCCATATTATTGAGTGGTTTAGAAGAGGTTTATATTACTTTAAACTTGCAGAACGGCTCCTGGCACTCGCCAATTGTGGCTGATGAGCAGCCTGAAGTTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCATCAGATGAGCTGCTTCTGTTTTATAGAGTGGGACAGGACGTTCAAAGGTATCTTTTTTCAAATCTCATAATGGTTTACTGAATTAACAACTCTATTCAAGCTAATTAATCTGATCGTAGTTTGTAGAAAGTTGATATGCTTAAGTTAATTGGTTTTGCAAATTAATTTTTTTTAAACAGGGCCTTAATACCTTTTCCTTGAAATCTCTCGGCACTTTTTTTTTACTGGTCGACTCGAGTCTCCAATGACCAACTGTCTAACATATTGAATAACTTTTTAAGTGAAAACTCGAACCCTTCTGCTTCCTAGTCTGTTTTATTCTATCTTGTGCTGATTGAGACAACAATCAGATGGAGTGGATGCATGAAGCGGTCATATGACAAAGGTGTTACTTGGACAGCAAGAGAACAGCTCCCCCCTGGTATCTTAGGACCAATAAAGAATAAGGTATACTTTATGTGCTCATATGTATCTACCATTCAATAAACTGTTTTTGTGAGATTCCACGTCGTTTGGAGAAGGAAACAAAGTATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACACGTTTAAAAACCTTGAGGGGAACTCCAAAAGAGAAAGCCCTGATGAAGCTGCTTTTCTGTGTTATGTTGTAGCCAATCTTGCTGGAAAATGGGGTTTTGCTCTGTGGATCTTCAGTTGAAAGTTGGAATTCTTGGGGTGCATGGATGGAGGTTCTTATGAATAGTTCTTTAGTTTTGACTTGTCCTAAAATCTGGAAAATGTGGCTGACATGTCAATATAACAGGTCACATCTGATTCAGGTAGATCATGGAGAAAGTTTGGGCCAATATACATGGAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCTTACCAGACTGCAAATGGAAATCTGCGTGTTTTACTTCGATCCTTCACAGGTATCGATAGTATTTGTATGTCAGAATCCACCGATGGTGGTCACAACTGGAGCTATGCTAAACCTACCAATCTTCCTAATCCAAACTCAGGTAACATGGCTGAGCTACAAGCATTACCTGAAAGTATCTGCATTCATGAACGTCTTAAGGCAATGATCATTATTGTGAGCATCTTCATTATGAAATTGAATTACTTCCCAGATTTAGAAATTTCTGATCTTATAGGAGTTTCATTCATACTGTCACTAGTAGAGATGACTGATATTGCTACTTCCTAGATTTCAACATCTCTGATCGTTATCCCTTATGATCATCTTTGACCATGCATTCTTATCAATAGGTATTGATGGGGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACCGTCTCGAGGGGCGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGATTCTTGGCTTGATGTTATGACCTTGGAGGACGAGTCAGGAAAGGAATTTTCATATCCGGCGGTCATTGAGGCTAGCGATGGCTCAGTTCACATCACGTACACATACAAGAGAAAGCAGATTAAGGTATGAAGGTTGATATCTAATCTAAAAGATACAATTGCCGGAGACTAACCCCATTATCATTTTTTCCTGGGCAGCATGTTGTTTTCAAACTGAAAATGCATAGGAATCACTAACGATGATATCTAAGAAAGCAAAGCTCTCCCTCTGTTTGTAAGCGATGGCGAGCAAGGCCAATAATGTGCAGCATCCAAACTCTCTGATCTTGGAATCAAATGCTGACTTACGGCGCATCATTTGTACATTCGGGTAAATATGATTGCTTTTCCTGCGTAGTATTCATCAAGATGACTCTGACTGAGCTTATGCATTAACTTTTGGAAGTTGGGTGGGGGGGTTGAGAACGGATGTAGTTGTATCAGTTGCGACGTGTTTGAATGAAGGAATAAAATAGGAATCTGACTTGCCCA ATGTCGGATTATGCTTCCATAGAACAGGACAAGCTATATCCATCCCGGGTTGTCGGTTCAAAGTCAACACGACCGTGCTCACCTCAGCTCACCTCAGCTCACCTCCCAGTCTCTCGTCAATCTCCCGCCTGCATCGGACCATCAAATTTCAGTCCTTGCCAGTGCGGCTGTTTAGGATTTGGAAACACTTTCACCTCTATATTCGATTTCTTGACTCCAAAATTCTCCTCCAATTTCCGCGGCTTTGGACCAAGAGTATTAGTAGGAGGACATTCGCATATAGCTTCAGTGGTTAGAAGTTTGAAAATGGACACAGGGAATTATATAGAGGGGCCCTTGCTAGAGGAGTTTACATTTCCTGCCAATTCTGTTCCTTTCGACAACTGCCACGCTTCTACAATTGTGGAGGTTGATAAAGATCATTACTTGGTTGCATATTTTGGGGGTACATTCGAGGGCGCACCGGATGTGAAGATTTGGTTGCAGACATATAAGAACGGCTCCTGGCACTCGCCAATTGTGGCTGATGAGCAGCCTGAAGTTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCATCAGATGAGCTGCTTCTGTTTTATAGAGTGGGACAGGACGTTCAAAGATGGAGTGGATGCATGAAGCGGTCATATGACAAAGGTGTTACTTGGACAGCAAGAGAACAGCTCCCCCCTGGTATCTTAGGACCAATAAAGAATAAGCCAATCTTGCTGGAAAATGGGGTTTTGCTCTGTGGATCTTCAGTTGAAAGTTGGAATTCTTGGGGTGCATGGATGGAGGTCACATCTGATTCAGGTAGATCATGGAGAAAGTTTGGGCCAATATACATGGAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCTTACCAGACTGCAAATGGAAATCTGCGTGTTTTACTTCGATCCTTCACAGGTATCGATAGTATTTGTATGTCAGAATCCACCGATGGTGGTCACAACTGGAGCTATGCTAAACCTACCAATCTTCCTAATCCAAACTCAGGTATTGATGGGGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACCGTCTCGAGGGGCGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGATTCTTGGCTTGATGTTATGACCTTGGAGGACGAGTCAGGAAAGGAATTTTCATATCCGGCGGTCATTGAGGCTAGCGATGGCTCAGTTCACATCACGTACACATACAAGAGAAAGCAGATTAAGCATGTTGTTTTCAAACTGAAAATGCATAGGAATCACTAACGATGATATCTAAGAAAGCAAAGCTCTCCCTCTGTTTGTAAGCGATGGCGAGCAAGGCCAATAATGTGCAGCATCCAAACTCTCTGATCTTGGAATCAAATGCTGACTTACGGCGCATCATTTGTACATTCGGGTAAATATGATTGCTTTTCCTGCGTAGTATTCATCAAGATGACTCTGACTGAGCTTATGCATTAACTTTTGGAAGTTGGGTGGGGGGGTTGAGAACGGATGTAGTTGTATCAGTTGCGACGTGTTTGAATGAAGGAATAAAATAGGAATCTGACTTGCCCA ATGTCGGATTATGCTTCCATAGAACAGGACAAGCTATATCCATCCCGGGTTGTCGGTTCAAAGTCAACACGACCGTGCTCACCTCAGCTCACCTCAGCTCACCTCCCAGTCTCTCGTCAATCTCCCGCCTGCATCGGACCATCAAATTTCAGTCCTTGCCAGTGCGGCTGTTTAGGATTTGGAAACACTTTCACCTCTATATTCGATTTCTTGACTCCAAAATTCTCCTCCAATTTCCGCGGCTTTGGACCAAGAGTATTAGTAGGAGGACATTCGCATATAGCTTCAGTGGTTAGAAGTTTGAAAATGGACACAGGGAATTATATAGAGGGGCCCTTGCTAGAGGAGTTTACATTTCCTGCCAATTCTGTTCCTTTCGACAACTGCCACGCTTCTACAATTGTGGAGGTTGATAAAGATCATTACTTGGTTGCATATTTTGGGGGTACATTCGAGGGCGCACCGGATGTGAAGATTTGGTTGCAGACATATAAGAACGGCTCCTGGCACTCGCCAATTGTGGCTGATGAGCAGCCTGAAGTTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCATCAGATGAGCTGCTTCTGTTTTATAGAGTGGGACAGGACGTTCAAAGATGGAGTGGATGCATGAAGCGGTCATATGACAAAGGTGTTACTTGGACAGCAAGAGAACAGCTCCCCCCTGGTATCTTAGGACCAATAAAGAATAAGCCAATCTTGCTGGAAAATGGGGTTTTGCTCTGTGGATCTTCAGTTGAAAGTTGGAATTCTTGGGGTGCATGGATGGAGGTCACATCTGATTCAGGTAGATCATGGAGAAAGTTTGGGCCAATATACATGGAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCTTACCAGACTGCAAATGGAAATCTGCGTGTTTTACTTCGATCCTTCACAGGTATCGATAGTATTTGTATGTCAGAATCCACCGATGGTGGTCACAACTGGAGCTATGCTAAACCTACCAATCTTCCTAATCCAAACTCAGGTATTGATGGGGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACCGTCTCGAGGGGCGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGATTCTTGGCTTGATGTTATGACCTTGGAGGACGAGTCAGGAAAGGAATTTTCATATCCGGCGGTCATTGAGGCTAGCGATGGCTCAGTTCACATCACGTACACATACAAGAGAAAGCAGATTAAGCATGTTGTTTTCAAACTGAAAATGCATAGGAATCACTAA MSDYASIEQDKLYPSRVVGSKSTRPCSPQLTSAHLPVSRQSPACIGPSNFSPCQCGCLGFGNTFTSIFDFLTPKFSSNFRGFGPRVLVGGHSHIASVVRSLKMDTGNYIEGPLLEEFTFPANSVPFDNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQTYKNGSWHSPIVADEQPEVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGVTWTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRSWRKFGPIYMENRSLSVIQPVPYQTANGNLRVLLRSFTGIDSICMSESTDGGHNWSYAKPTNLPNPNSGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIKHVVFKLKMHRNH Homology
BLAST of CmoCh10G004570 vs. ExPASy TrEMBL
Match: A0A6J1E060 (uncharacterized protein LOC111429641 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429641 PE=4 SV=1) HSP 1 Score: 783.1 bits (2021), Expect = 5.9e-223 Identity = 374/385 (97.14%), Postives = 374/385 (97.14%), Query Frame = 0
BLAST of CmoCh10G004570 vs. ExPASy TrEMBL
Match: A0A6J1JH94 (uncharacterized protein LOC111485702 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485702 PE=4 SV=1) HSP 1 Score: 761.9 bits (1966), Expect = 1.4e-216 Identity = 361/370 (97.57%), Postives = 362/370 (97.84%), Query Frame = 0
BLAST of CmoCh10G004570 vs. ExPASy TrEMBL
Match: A0A1S3BWW7 (uncharacterized protein LOC103494313 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494313 PE=4 SV=1) HSP 1 Score: 699.5 bits (1804), Expect = 8.6e-198 Identity = 332/377 (88.06%), Postives = 348/377 (92.31%), Query Frame = 0
BLAST of CmoCh10G004570 vs. ExPASy TrEMBL
Match: A0A6J1E3N6 (uncharacterized protein LOC111429641 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429641 PE=4 SV=1) HSP 1 Score: 692.6 bits (1786), Expect = 1.1e-195 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
BLAST of CmoCh10G004570 vs. ExPASy TrEMBL
Match: A0A6J1JMD4 (uncharacterized protein LOC111485702 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485702 PE=4 SV=1) HSP 1 Score: 684.1 bits (1764), Expect = 3.7e-193 Identity = 322/326 (98.77%), Postives = 322/326 (98.77%), Query Frame = 0
BLAST of CmoCh10G004570 vs. NCBI nr
Match: XP_022921339.1 (uncharacterized protein LOC111429641 isoform X1 [Cucurbita moschata] >XP_022921341.1 uncharacterized protein LOC111429641 isoform X1 [Cucurbita moschata]) HSP 1 Score: 783.1 bits (2021), Expect = 1.2e-222 Identity = 374/385 (97.14%), Postives = 374/385 (97.14%), Query Frame = 0
BLAST of CmoCh10G004570 vs. NCBI nr
Match: XP_023515566.1 (uncharacterized protein LOC111779686 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515567.1 uncharacterized protein LOC111779686 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 770.0 bits (1987), Expect = 1.1e-218 Identity = 364/370 (98.38%), Postives = 366/370 (98.92%), Query Frame = 0
BLAST of CmoCh10G004570 vs. NCBI nr
Match: XP_022988465.1 (uncharacterized protein LOC111485702 isoform X1 [Cucurbita maxima] >XP_022988466.1 uncharacterized protein LOC111485702 isoform X1 [Cucurbita maxima]) HSP 1 Score: 761.9 bits (1966), Expect = 2.9e-216 Identity = 361/370 (97.57%), Postives = 362/370 (97.84%), Query Frame = 0
BLAST of CmoCh10G004570 vs. NCBI nr
Match: KAG6589734.1 (hypothetical protein SDJN03_15157, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 748.8 bits (1932), Expect = 2.6e-212 Identity = 355/358 (99.16%), Postives = 355/358 (99.16%), Query Frame = 0
BLAST of CmoCh10G004570 vs. NCBI nr
Match: XP_038880593.1 (uncharacterized protein LOC120072245 isoform X2 [Benincasa hispida]) HSP 1 Score: 717.2 bits (1850), Expect = 8.2e-203 Identity = 341/374 (91.18%), Postives = 353/374 (94.39%), Query Frame = 0
BLAST of CmoCh10G004570 vs. TAIR 10
Match: AT5G57700.1 (BNR/Asp-box repeat family protein ) HSP 1 Score: 537.7 bits (1384), Expect = 8.3e-153 Identity = 243/309 (78.64%), Postives = 277/309 (89.64%), Query Frame = 0
BLAST of CmoCh10G004570 vs. TAIR 10
Match: AT5G57700.2 (BNR/Asp-box repeat family protein ) HSP 1 Score: 537.7 bits (1384), Expect = 8.3e-153 Identity = 243/309 (78.64%), Postives = 277/309 (89.64%), Query Frame = 0
BLAST of CmoCh10G004570 vs. TAIR 10
Match: AT5G57700.3 (BNR/Asp-box repeat family protein ) HSP 1 Score: 537.7 bits (1384), Expect = 8.3e-153 Identity = 243/309 (78.64%), Postives = 277/309 (89.64%), Query Frame = 0
BLAST of CmoCh10G004570 vs. TAIR 10
Match: AT5G57700.4 (BNR/Asp-box repeat family protein ) HSP 1 Score: 537.7 bits (1384), Expect = 8.3e-153 Identity = 243/309 (78.64%), Postives = 277/309 (89.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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