CmoCh10G004460 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G004460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	pathogenesis-related protein PR-1-like
Location	Cmo_Chr10: 2012187 .. 2013683 (+)
RNA-Seq Expression	CmoCh10G004460
Synteny	CmoCh10G004460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCATATCTGCTCATCCCCATCGCCATTATTCTCACCCTCCTAAGCTCATCCGGCCCCGCCGCCGCAGCTCCGGTGAGGTCCGACAGAGTCCTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCTCTCCGATTGGCCCCCTTGGTTTGGGACAACAAACTGGCTCGCTACGCACAGTGGTACGCGAACAAGCGGCGAGGGGATTGTGCCCTCCGTCACTCTGGCGGACCTTACGGTGAAAACATCTTCTGGGGCAGCGGCAATGCTTGGAATCCGGCACAGGCTGTGTCGGATTGGGTGTCGGAGCGGAAGTGGTACAGTTATTGGGCCAATTCTTGCGTGGAGGGTGAACTGCGTGGGCATTATACTCAAATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCTAGAGTCACCTGCAACGATGGTAAAGGCGTCTTCATCACTTGCAACTATGACCCTCCTGGTAATTACATCGGGGAGAGACCTTATTAAACGCCATTAATTATCTTCATCATGGGTAAAAGTTCTGTTGCTCATGTCCTTGTCAAATTCACATGTAATTGATATGTGCTGTATCCCCAATAAATATATATATATATATCTTTCATTTTAATTTCCGTACGGAATAATAAAATTTTGAAATAAAACTCTATTAGGAAGAGATTATGAGTTAATAATAAACAATACAATATTGTAAATGATCATAGGCATATTAGATTTACAATATGTTTGTAATCTTGGGGAATAATTGTGTATTATAATGATTCCATTGATTTCAGTCTTAATTATTGTTGCCAAAAATTAAATGTAGAGCATAGGGTAAAAAAGATATTGAGGTAAGAATAATAGATTTATAGGAAGCAGTGGCGGTAGAATTATGAGTGTTCAGACGGTCAGAGATTCTGAACGTGGAAACATGCATCTGTCGCCGCTCATTTAAATTCCCAACTACTTTAGGCCTATGTTCTGGACGGTGGGCTCCACAACCCACTCGGATTCTTTTTCAGATGGGCTTTAGTTGGGCCCAACACTGAGTCCAAGTCAGGCCCATGTCAATAATAGAGAGTTTTTTTTTTTATCAACATTTATTCAATTTTAATATGAACGATTTATTTCATTATTATTCTTTGTCATTATTGACTATTACCATTATAATTGATTGATTTTATTATTACAGCAAAAGTAAATGTTTAAATACGCTTAAATAAAAGAGTAAATGTATTTATCTAAAGGGTAAGATTTCACCTTGGTTTTAGAGATAACGAAGTTTTAACTCAGTGGCGAAACTTCTCACTAGGGCGTTTTAAAAACAAGCGAAACCGAGAGGGATATAGCTATTACCGGCCGAAAGTTCCATGTGAATGGTAACTCAAACTTGGGCGGTGGTTGCTTTGACACTCCGTAGATGGTTTTGGTTGTTTGTTTGCAGGTGCACACCAGATGGTTGAGAAGTGTTGTGGGAGAGAACTTGGGGCGTAA

mRNA sequence

ATGCATGCATATCTGCTCATCCCCATCGCCATTATTCTCACCCTCCTAAGCTCATCCGGCCCCGCCGCCGCAGCTCCGGTGAGGTCCGACAGAGTCCTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCTCTCCGATTGGCCCCCTTGGTTTGGGACAACAAACTGGCTCGCTACGCACAGTGGTACGCGAACAAGCGGCGAGGGGATTGTGCCCTCCGTCACTCTGGCGGACCTTACGGTGAAAACATCTTCTGGGGCAGCGGCAATGCTTGGAATCCGGCACAGGCTGTGTCGGATTGGGTGTCGGAGCGGAAGTGGTACAGTTATTGGGCCAATTCTTGCGTGGAGGGTGAACTGCGTGGGCATTATACTCAAATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCTAGAGTCACCTGCAACGATGGTAAAGGCGTCTTCATCACTTGCAACTATGACCCTCCTGGTGCACACCAGATGGTTGAGAAGTGTTGTGGGAGAGAACTTGGGGCGTAA

Coding sequence (CDS)

ATGCATGCATATCTGCTCATCCCCATCGCCATTATTCTCACCCTCCTAAGCTCATCCGGCCCCGCCGCCGCAGCTCCGGTGAGGTCCGACAGAGTCCTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCTCTCCGATTGGCCCCCTTGGTTTGGGACAACAAACTGGCTCGCTACGCACAGTGGTACGCGAACAAGCGGCGAGGGGATTGTGCCCTCCGTCACTCTGGCGGACCTTACGGTGAAAACATCTTCTGGGGCAGCGGCAATGCTTGGAATCCGGCACAGGCTGTGTCGGATTGGGTGTCGGAGCGGAAGTGGTACAGTTATTGGGCCAATTCTTGCGTGGAGGGTGAACTGCGTGGGCATTATACTCAAATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCTAGAGTCACCTGCAACGATGGTAAAGGCGTCTTCATCACTTGCAACTATGACCCTCCTGGTGCACACCAGATGGTTGAGAAGTGTTGTGGGAGAGAACTTGGGGCGTAA

Protein sequence

MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVEGELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGAHQMVEKCCGRELGA

Homology

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BLAST of CmoCh10G004460 vs. ExPASy Swiss-Prot
Match: Q40374 (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-54
Identity = 94/153 (61.44%), Postives = 114/153 (74.51%), Query Frame = 0


Query: 11  IILTLLSSSGPAAAAPVRS--DRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYAN 70
           ++LT +S    +     +S   R  + QFL P N AR A+ L PLVWD+KL  YAQWYAN
Sbjct: 13  LLLTFISHVSASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYAN 72

Query: 71  KRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVEGELRGHYT 130
           +RR DCAL HS GPYGENIFWGSG  WNPAQAVS WV E+++Y+YW NSCV+GE+ GHYT
Sbjct: 73  QRRNDCALEHSNGPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYT 132

Query: 131 QIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           Q+VW ST ++GCA V C+D KG F+TCNYDPPG
Sbjct: 133 QVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPG 165

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BLAST of CmoCh10G004460 vs. ExPASy Swiss-Prot
Match: Q00008 (Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-42
Identity = 79/154 (51.30%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 9   IAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYAN 68
           +A++L  L  +   A  P  S+   Q  +L P N+AR A+ + P+ W  KL ++A+ YA 
Sbjct: 7   LAVLLLWLVMAAATAVHPSYSENSPQ-DYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAA 66

Query: 69  KRRGDCALRHSGGPYGENIFWGS-GNAWNPAQAVSDWVSERKWYSYWANSCVEGELRGHY 128
           +R GDC L+HSGGPYGENIFWGS G  W    AV  WV E++WY+Y  NSC  G++ GHY
Sbjct: 67  QRAGDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHY 126

Query: 129 TQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           TQ+VWR+T  IGCARV C D +GVFI CNY+P G
Sbjct: 127 TQVVWRATTSIGCARVVCRDNRGVFIICNYEPRG 159

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BLAST of CmoCh10G004460 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41
Identity = 80/155 (51.61%), Postives = 106/155 (68.39%), Query Frame = 0


Query: 8   PIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYA 67
           P  +IL  L+ S  AA   +   +   + ++ PHNAAR A+ +  + W  KL  +AQ YA
Sbjct: 4   PKLVILLALAMS--AAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYA 63

Query: 68  NKRRGDCALRHSGGPYGENIFWGSGNA-WNPAQAVSDWVSERKWYSYWANSCVEGELRGH 127
           N+R  DC L+HSGGPYGENIFWGS  A W  + AV+ WVSE+K Y Y +N+C  G++ GH
Sbjct: 64  NQRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGH 123

Query: 128 YTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           YTQ+VWR++  IGCARV CN+ +GVFITCNY+P G
Sbjct: 124 YTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRG 156

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BLAST of CmoCh10G004460 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-41
Identity = 79/154 (51.30%), Postives = 107/154 (69.48%), Query Frame = 0


Query: 9   IAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYAN 68
           +AI+L L  +   AA   +   +   + ++ PHNAAR A+ +  + W  KL  +AQ YAN
Sbjct: 6   LAILLALAMA---AAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYAN 65

Query: 69  KRRGDCALRHSGGPYGENIFWGSGNA-WNPAQAVSDWVSERKWYSYWANSCVEGELRGHY 128
           +R  DC L+HSGGPYGENIFWGS  A W  A AV+ WV+E+K Y+Y +N+C  G++ GHY
Sbjct: 66  QRINDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHY 125

Query: 129 TQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           TQ+VWR++  IGCARV CN+ +GVFITCNY+P G
Sbjct: 126 TQVVWRASTSIGCARVVCNNNRGVFITCNYEPRG 156

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BLAST of CmoCh10G004460 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.0e-41
Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 9   IAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYAN 68
           +AI+L L  +   AA   +   +   + ++ PHNAAR A+ +  + W  KL  +AQ YAN
Sbjct: 6   LAILLALAMA---AAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYAN 65

Query: 69  KRRGDCALRHSGGPYGENIFWGSGNA-WNPAQAVSDWVSERKWYSYWANSCVEGELRGHY 128
           +R  DC L+HSGGPYGENIFWGS  A W  + AV+ WVSE+K Y Y +N+C  G++ GHY
Sbjct: 66  QRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHY 125

Query: 129 TQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           TQ+VWR++  IGCARV CN+ +GVFITCNY+P G
Sbjct: 126 TQVVWRASTSIGCARVVCNNNRGVFITCNYEPRG 156

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BLAST of CmoCh10G004460 vs. ExPASy TrEMBL
Match: A0A6J1E2D3 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429942 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 161

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BLAST of CmoCh10G004460 vs. ExPASy TrEMBL
Match: A0A6J1JD89 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485737 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.7e-91
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           GEL GHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 161

[Close]

BLAST of CmoCh10G004460 vs. ExPASy TrEMBL
Match: A0A5D3CE49 (Pathogenesis-related protein PR-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00870 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.0e-81
Identity = 143/163 (87.73%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MHAY--LLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNK 60
           MHA+  ++IPIA IL LL+S+G  AAA  RSDR+LQKQFLGPHNAARYALRL+PLVWD+K
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARSRSDRILQKQFLGPHNAARYALRLSPLVWDSK 60

Query: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSC 120
           LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN W PAQAV+DWVSERKWYSYWANSC
Sbjct: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANSC 120

Query: 121 VEGELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           VEGEL GHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG
Sbjct: 121 VEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 163

[Close]

BLAST of CmoCh10G004460 vs. ExPASy TrEMBL
Match: A0A1S3BWR0 (pathogenesis-related protein PR-1 OS=Cucumis melo OX=3656 GN=LOC103494292 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.0e-81
Identity = 143/163 (87.73%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MHAY--LLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNK 60
           MHA+  ++IPIA IL LL+S+G  AAA  RSDR+LQKQFLGPHNAARYALRL+PLVWD+K
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARSRSDRILQKQFLGPHNAARYALRLSPLVWDSK 60

Query: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSC 120
           LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN W PAQAV+DWVSERKWYSYWANSC
Sbjct: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANSC 120

Query: 121 VEGELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           VEGEL GHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG
Sbjct: 121 VEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 163

[Close]

BLAST of CmoCh10G004460 vs. ExPASy TrEMBL
Match: A0A6J1ES44 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111436010 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.8e-78
Identity = 141/161 (87.58%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           M AYLLIPIAI + LLSS+G A AA V+SD+ LQKQFLGPHNAARYALRLAPLVWD KLA
Sbjct: 1   MQAYLLIPIAIFI-LLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVE 120

Query: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           GEL GHYTQIVWRSTRRIGCARVTC  GKGVFITCNYDPPG
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPG 160

[Close]

BLAST of CmoCh10G004460 vs. NCBI nr
Match: XP_022921796.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata])

HSP 1 Score: 348.2 bits (892), Expect = 4.1e-92
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 161

[Close]

BLAST of CmoCh10G004460 vs. NCBI nr
Match: XP_022988522.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima])

HSP 1 Score: 345.1 bits (884), Expect = 3.5e-91
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           GEL GHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 161

[Close]

BLAST of CmoCh10G004460 vs. NCBI nr
Match: XP_023516778.1 (pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 154/161 (95.65%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSS G AAAA VRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGN WNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           GEL GHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPG
Sbjct: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPG 161

[Close]

BLAST of CmoCh10G004460 vs. NCBI nr
Match: XP_008453637.1 (PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo] >KAA0056235.1 pathogenesis-related protein PR-1 [Cucumis melo var. makuwa] >TYK09488.1 pathogenesis-related protein PR-1 [Cucumis melo var. makuwa])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 143/163 (87.73%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MHAY--LLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNK 60
           MHA+  ++IPIA IL LL+S+G  AAA  RSDR+LQKQFLGPHNAARYALRL+PLVWD+K
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARSRSDRILQKQFLGPHNAARYALRLSPLVWDSK 60

Query: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSC 120
           LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN W PAQAV+DWVSERKWYSYWANSC
Sbjct: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANSC 120

Query: 121 VEGELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           VEGEL GHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG
Sbjct: 121 VEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 163

[Close]

BLAST of CmoCh10G004460 vs. NCBI nr
Match: XP_022929438.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 9.9e-78
Identity = 141/161 (87.58%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           M AYLLIPIAI + LLSS+G A AA V+SD+ LQKQFLGPHNAARYALRLAPLVWD KLA
Sbjct: 1   MQAYLLIPIAIFI-LLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVE 120

Query: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
           GEL GHYTQIVWRSTRRIGCARVTC  GKGVFITCNYDPPG
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPG 160

[Close]

BLAST of CmoCh10G004460 vs. TAIR 10
Match: AT4G30320.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 9.0e-53
Identity = 88/128 (68.75%), Postives = 104/128 (81.25%), Query Frame = 0


Query: 34  QKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN 93
           Q+QF+GP NAAR  LRL PL WD KLARYAQW+AN+RRGDCAL HS GPYGEN+FWGSGN
Sbjct: 27  QEQFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHSNGPYGENLFWGSGN 86

Query: 94  AWNPAQAVSDWVSERKWYSYWANSCVEGELRGHYTQIVWRSTRRIGCARVTCNDGKGVFI 153
            W P+QA   W+SE + Y+Y +NSC   E+ GHYTQIVW++T++IGCA V CN G GVF+
Sbjct: 87  RWGPSQAAYGWLSEARSYNYRSNSC-NSEMCGHYTQIVWKNTQKIGCAHVICNGGGGVFL 146

Query: 154 TCNYDPPG 162
           TCNYDPPG
Sbjct: 147 TCNYDPPG 153

[Close]

BLAST of CmoCh10G004460 vs. TAIR 10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 4.3e-47
Identity = 78/129 (60.47%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 33  LQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSG 92
           + + FL PHNA R  L L PL+WD KLA YA W+AN+RR DC+L HS GPYGEN+FWGSG
Sbjct: 71  IARLFLDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGPYGENLFWGSG 130

Query: 93  NAWNPAQAVSDWVSERKWYSYWANSCVEGELRGHYTQIVWRSTRRIGCARVTCNDGKGVF 152
           ++W P  AV  W+ E + Y++  NSC    + GHYTQ+VWR T+R+GCARV C +G GVF
Sbjct: 131 SSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGCARVVCENGAGVF 190

Query: 153 ITCNYDPPG 162
           ITCNYDPPG
Sbjct: 191 ITCNYDPPG 199

[Close]

BLAST of CmoCh10G004460 vs. TAIR 10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-45
Identity = 78/128 (60.94%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 34  QKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN 93
           ++QFL PHN  R  L L PLVWD K+A YA W+AN+RR DC+L HS GPYGEN+FWGSG+
Sbjct: 75  EQQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGSGS 134

Query: 94  AWNPAQAVSDWVSERKWYSYWANSCVEGELRGHYTQIVWRSTRRIGCARVTCNDGKGVFI 153
            +    AV  W  E K Y++  N+C    + GHYTQIVWR TRR+GCARV C +G GVFI
Sbjct: 135 DFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGVFI 194

Query: 154 TCNYDPPG 162
           TCNYDPPG
Sbjct: 195 TCNYDPPG 202

[Close]

BLAST of CmoCh10G004460 vs. TAIR 10
Match: AT4G25780.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42
Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 0


Query: 36  QFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRH--SGGPY--GENIFWGS 95
           QFL  HN  R A    PL+WD +L  YAQ +AN+RRGDCALRH  S G +  GENI+WG 
Sbjct: 54  QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGY 113

Query: 96  GNAWNPAQAVSDWVSERKWYSYWANSCVEGELRGHYTQIVWRSTRRIGCARVTCNDGKGV 155
           G  W+PA AV  W SE+++Y Y +N+C  G++ GHYTQIVW+STRR+GCARV C++G G+
Sbjct: 114 GANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNG-GI 173

Query: 156 FITCNYDPPG 162
           F+TCNYDPPG
Sbjct: 174 FMTCNYDPPG 182

[Close]

BLAST of CmoCh10G004460 vs. TAIR 10
Match: AT4G31470.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 6.3e-38
Identity = 80/168 (47.62%), Postives = 95/168 (56.55%), Query Frame = 0


Query: 5   LLIPIAIILTLLSSSGPAAAAPVRSDRV-----------LQKQFLGPHNAARYALRLAPL 64
           ++I I+  L  LS   P+   P  S  +           +Q+QFL PHN  R  LRL PL
Sbjct: 11  IIIVISTPLPSLSFQIPSNRTPTTSTLIFSQDKALARNTIQQQFLRPHNILRAKLRLPPL 70

Query: 65  VWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSY 124
            W N LA YA  +A  RRGDC L HSGGPYGEN+FWGSG  W P  AV+ W SE K+Y  
Sbjct: 71  KWSNSLALYASRWARTRRGDCKLIHSGGPYGENLFWGSGKGWTPRDAVAAWASEMKYYDR 130

Query: 125 WANSCVEGELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPG 162
             + C       HYTQ+VW+ + RIGCA   C  G   FI CNYDPPG
Sbjct: 131 RTSHCKANGDCLHYTQLVWKKSSRIGCAISFCKTG-DTFIICNYDPPG 177

The following BLAST results are available for this feature:

BLAST of CmoCh10G004460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40374	2.7e-54	61.44	Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV...	[more]
Q00008	2.4e-42	51.30	Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1	[more]
P35793	1.2e-41	51.61	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35792	1.5e-41	51.30	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q05968	2.0e-41	51.30	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]

BLAST of CmoCh10G004460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2D3	2.0e-92	100.00	pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11142...	[more]
A0A6J1JD89	1.7e-91	99.38	pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114857...	[more]
A0A5D3CE49	6.0e-81	87.73	Pathogenesis-related protein PR-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BWR0	6.0e-81	87.73	pathogenesis-related protein PR-1 OS=Cucumis melo OX=3656 GN=LOC103494292 PE=4 S...	[more]
A0A6J1ES44	4.8e-78	87.58	pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of CmoCh10G004460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921796.1	4.1e-92	100.00	pathogenesis-related protein PR-1-like [Cucurbita moschata]	[more]
XP_022988522.1	3.5e-91	99.38	pathogenesis-related protein PR-1-like [Cucurbita maxima]	[more]
XP_023516778.1	1.2e-86	95.65	pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_008453637.1	1.2e-80	87.73	PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo] >KAA0056235.1 pathog...	[more]
XP_022929438.1	9.9e-78	87.58	pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 path...	[more]

BLAST of CmoCh10G004460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30320.1	9.0e-53	68.75	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT5G57625.1	4.3e-47	60.47	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G25790.1	1.4e-45	60.94	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G25780.1	2.5e-42	59.23	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G31470.1	6.3e-38	47.62	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 123..142 score: 55.31 coord: 53..71 score: 46.38 coord: 98..113 score: 26.95
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 152..165 score: 41.5 coord: 100..113 score: 36.99 coord: 124..140 score: 59.57 coord: 53..71 score: 42.05
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 21..163
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 32..165 e-value: 3.3E-47 score: 172.8
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 40..157 e-value: 7.0E-22 score: 78.6
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 32..167 e-value: 3.5E-38 score: 133.0
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 26..162
None	No IPR available	PANTHER	PTHR10334:SF466	OS02G0786500 PROTEIN	coord: 21..163
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 34..161 e-value: 2.13489E-78 score: 227.902
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 125..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G004460.1	CmoCh10G004460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region