
CmoCh10G003550 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAATTAAATGAGAAGTTGGAGATATCAAATAGAATGATTGAAAACTTCAAGTCTGTTAGAAATGAAATCCGTATGGCTATTAACTCTCTTTTGAAGGTAATCTGTAAATGAAAATACTTTAGTTTACATTATTGCAGCATTTAGCTTAGATTGTGTTAAAAATGAGAAGTTTTACAAGTTGGGAGACCATTCTTCTTCTTATCTGCTGTTCTTTTTTTTTTTTTTTTTAATTGTTGACATCGGATTTGAATAAATCTATTATGTGATAGCTTCATGCTTGCAGGGTTGGCAGCTGTTTAGAAATCAATAGGAAAAATGTAATTTTTTCCCGAGTTTTGAGACCTGCAAAAAAAACTTCATTATTCCTCGAGGTTCTTCCATGTAAAAAGCAATTGATTTAGAATTTGCTGTGGTTGTAGTTTTTTCAATGTGATTAAGAGAGTATAGTTAAATAACTCTAGTTAAAGAGAAGATTTGTGTGTCCTATACTTCAATACTTCAGACACCTAATTAATTTCTTTACTTTATATTCCGGTCATATTTCTCATTTTATGTTTTCATTTATATATTGACAGTATATTTCCTAGTTACTTTTGTTGGTAGTTCCTGCCCCATTATTCTTTGAGACTACATTTCAAGTTGATTAGCTTGATTTTGACATAAAATTTTCACTTTGCTTAGGATGATGGAGTTCTAGTCATCCCCACCACTGCTGATCCTCCACCAAAATTAGGTGGAAAGGATTTTTTTTCTGAAGAGTACCAGACTCGTTTGTTTAGTTCATTGAGCATTGCTAGCATATCGGGTTGTTGTCAGGCAAGCTTTCCCCCACTCTCTTCCTGCATCTTCATCTTCTTCTTTTGATTTTGATTTCTTTATTTATTAATATTTTTTGGAGGTTGGTTTTCTTTTTCGCGAGAAATTTCCCACAAAAATGATCTATGTTTGCCTAATTTCAGGTCACCTTGCCACTGGGATTTCACGATAACTGTCCTGTATCTATGTCCTTTTTAGCCAGGCATGGGGCAGATCGCTTTTTACTAGATACTGTGCAGACCATGTATAAGACTTTACAAGAGGAGGCTGAGGCTGCGTCCAAAACCAAGTTCTCAAAGAATGCTGTCAGCCAAGAACAGTCGGCTGAGATTGCAAAAGAAAAGGTATTCTTAAACTGTTAGTAAATCACCTTTCTTTTGGGCCTTATGGTTTCTGCTGTTCTTTAGATTCTCTATTTTCTATGCGAACATATCTTCATGATCTTCGGCTTTATTTACTCAAGCAACCTGTTCGTTGCTGATGTACATGATTTCTGCTGTTGTGTGACCACTTATAATCATTCTTTTGGCCATTCCCTCTCTCCTTTTACCAGTCTGTTGGATGTTTTAATGATGAAATTCGTGTTACAAACGTTTTGAAGAATTCTCTGATTCAGTTCTCTCTCTTACTGGTGAATAACTAATTTCTGTGGGTTTAAGAAGTATAACAGGTAAATTTTACGTTAAATTACAAAAACTACCCTTGAACATTGCAATTTGTTTAAAAAAATACACTTATTCTTTCAAAAGTTACAATATTATTCTTGACCTTTCATAAATGTTCAAAACTATCCTTAGTAAAAATTTGTTTGGGTGTCGTTGAAATTGGGACATGGGATAATGTGATGATCACCTGGAACGATGTGGTGTGTTTGAGTCCCAATTTTCATGCCACATTCCAACTAAAGTATTTCAAAGGTAGTTTTGAAGCCATTATGAAAGATTAAGGTAATATTGCAACTTTTGAAATAAGATGTTTGAAGTATAGTTTTCTTTTGTAATTTAGCCTAAATTGTATGTGAATGTATCTGTCACCTGCTGTTAATCGTATTCAAGTTAGTGTTTAGTAATGTATATTCAACTATAACCATTTGATGCCAAGTTGAAGACCGACTAGCATATATGATGACCTCCTCGCTGTCATGTTAAATTGACTGTGATGAGATAACGAAATATTTTCAATTATTTCTTCAAATAGTGCCAATAATAATTTTGATATAATCAATCTGCATATCATCAGCTCTGTATTTCCTGCTTTCTCCCCATAGCCCCATCTATCTTCTCGGTAAACTTAATAGCATGACAGATTTTTTTATTACTTAGTATATTGCTATAGTTTCGCAATAAAGCTAGAGGTTATTCATAAGGCTCTAGTCTCTAGATTTCACTGTAGAGTTTGCAATACAAAATCCTATTTAATACTTATCCCCATAGTCTTCCCTTTGATAAATCTAATCTTATGAAGAAAATGTATATTTTCTGACTGCTTCATACGGTGACTGCACATACTTTTGTTAAGGCATTAACTCTTTGCTCAATGTTTAATTGCGCACATTCATGTGATTTTGGAATTCCAGGGCAATCAAGCATACAAAGAAAAACAGTGGGAGAAGGCTATTGGTTGTTATACGGAAGCCATCAAACTTAACAGCAGAAATGCTACATATTACAGTAACAGGGCTGCAGCATATCTAGAGCTTGGACGGTATATTCATTTTTTATCTCTTCTCTTTTTTTTTTCTTTTATAAAAATAATGAAGTTTCCGTTTAATCTCTAAACCATTTCCTGTAGGTTTATGATCATTTCTTTCTTTCCTGTGTCCTTTCAGGTTTCAGCAGGCAGAGGCAGATTGCAGTAAAGCTATTGACCTGGATAAAAAGGTGATTCGTTTAGGAAACTTTTGTGCTGTGAATAAGTTTTTAAATGGTTTTCATATGTTCGTTTGTTCCTTACTATTAATCAGAAACCTTTGAAATATCCTTTTGGTCTGTAATTTGCTCCTCTGTACATCCTGCTCTGCCTTCATAGTAAATAATGTGTTATTAATTAAAATAAAAATAATGTTGTTTGAAAAATTATAATTTGAATTTGTATAGCTCGTTTTTGCTTTTGTGGCAACCTTACAATTCGATTGATGACTGAAACAAAAGGAGGTTGAGAATCTACTTACTCCTTTTACCCTTTCTTTCCCCTATCCTTGTTAGTTTACTATCTGAACGAGTTTCAAAAATTTGGGTACAACCGTTGGCCTGGATGGATGTCTGGATAATGGAGTTATGAACGGAGGCATCTTTCCGCTAATTATAATAATAATAGTTTAAAAAAAGAACTCCATTTGTCCTCCATTTCAGTGAGATTAGCATTTGACTTCAAACACTAAACTATTTCCTTGACATTTCCAAATATTGTCCATCTTCCAGAATGTTAAATCCTTTTTACGAAGGGGTACAGCGAGGGAGATGCTTGGTTTCTACAAGGAAGCAATTGAAGGTAAGCTGTTTCTTCTTGTTTGACTGTATTATTTTTATGGCTTCTTGAGTGAATTTTGCCATATTTTTCACAACTGTTCTTATAGATCGTGAATAAGTTGTTGAGTTCATATTGGAATATCATATCATCTTATGCTAGAACGGATGGTTAATTGTTGGGGCTGGTTTACAAAAAGCATCCCAACAGAATTATTATCTGAAAAGTTGTTCGAGATGCCGAGTTTTGTCAAAACTTGATCGTCTGATTAAAATCCAAATGCCATTTGCATCACTCTTTTCTTGACTGCAAATTCTCTTTTCGATTGGTAACTTCATTTCTAGTGCAAATCTAACCATCAGTAGTTGATGGATTCGCATTTCACACTTGGGTAACCGCCTTTGCCCTAAAATTTTTTTTTGAAGTTCCCTGATTGTTTGTTTTGATGGTGATATTTCCTGCAGATTTTAGTCATGCCCTTGTTCTTGAACCAACAAATAAAAGAGCATCAATATCTGCAGAGAGATTAAGAAAGCTGTTCTCAAGTTGATTCAGTAAGTGAGCAATCTTATTGTTCTCTGCCATGAAGACCTTTACTTGGCAATGGGGCACTCCCACCCACACAGTCGTTCTTGGCGGTTGGTGGTATATCTGAGAGTGCTCCATTTGAGAGCGCATATAGAGGGAGTAATGTTATGCCCTTGATTTTTGTATTTTTATTTGATTTGGAGAATAGGAACATTGATTATTATTTTGCGAAGCTGTGTAATCCAATTTTGTCTCCAACCTTTCTCAATGCGGGTTGTAGTTCTAGCAGAGCTGATGAATGGTTGCAATACTATTATATGATTGGTGAGAGTACTTCAAATATCTTTGGAGTCTTCTCTTGTATTCTAGCTCAAGTAAGCATTAATTGGCC ATGGAGCAATTAAATGAGAAGTTGGAGATATCAAATAGAATGATTGAAAACTTCAAGTCTGTTAGAAATGAAATCCGTATGGCTATTAACTCTCTTTTGAAGGATGATGGAGTTCTAGTCATCCCCACCACTGCTGATCCTCCACCAAAATTAGGTGGAAAGGATTTTTTTTCTGAAGAGTACCAGACTCGTTTGTTTAGTTCATTGAGCATTGCTAGCATATCGGGTTGTTGTCAGGTCACCTTGCCACTGGGATTTCACGATAACTGTCCTGTATCTATGTCCTTTTTAGCCAGGCATGGGGCAGATCGCTTTTTACTAGATACTGTGCAGACCATGTATAAGACTTTACAAGAGGAGGCTGAGGCTGCGTCCAAAACCAAGTTCTCAAAGAATGCTGTCAGCCAAGAACAGTCGGCTGAGATTGCAAAAGAAAAGGGCAATCAAGCATACAAAGAAAAACAGTGGGAGAAGGCTATTGGTTGTTATACGGAAGCCATCAAACTTAACAGCAGAAATGCTACATATTACAGTAACAGGGCTGCAGCATATCTAGAGCTTGGACGGTTTCAGCAGGCAGAGGCAGATTGCAGTAAAGCTATTGACCTGGATAAAAAGGTGATTCGTTTAGGAAACTTTTGTGCTAATGTTAAATCCTTTTTACGAAGGGGTACAGCGAGGGAGATGCTTGGTTTCTACAAGGAAGCAATTGAAGATTTTAGTCATGCCCTTGTTCTTGAACCAACAAATAAAAGAGCATCAATATCTGCAGAGAGATTAAGAAAGCTGTTCTCAAGTTGATTCAGTAAGTGAGCAATCTTATTGTTCTCTGCCATGAAGACCTTTACTTGGCAATGGGGCACTCCCACCCACACAGTCGTTCTTGGCGGTTGGTGGTATATCTGAGAGTGCTCCATTTGAGAGCGCATATAGAGGGAGTAATGTTATGCCCTTGATTTTTGTATTTTTATTTGATTTGGAGAATAGGAACATTGATTATTATTTTGCGAAGCTGTGTAATCCAATTTTGTCTCCAACCTTTCTCAATGCGGGTTGTAGTTCTAGCAGAGCTGATGAATGGTTGCAATACTATTATATGATTGGTGAGAGTACTTCAAATATCTTTGGAGTCTTCTCTTGTATTCTAGCTCAAGTAAGCATTAATTGGCC ATGGAGCAATTAAATGAGAAGTTGGAGATATCAAATAGAATGATTGAAAACTTCAAGTCTGTTAGAAATGAAATCCGTATGGCTATTAACTCTCTTTTGAAGGATGATGGAGTTCTAGTCATCCCCACCACTGCTGATCCTCCACCAAAATTAGGTGGAAAGGATTTTTTTTCTGAAGAGTACCAGACTCGTTTGTTTAGTTCATTGAGCATTGCTAGCATATCGGGTTGTTGTCAGGTCACCTTGCCACTGGGATTTCACGATAACTGTCCTGTATCTATGTCCTTTTTAGCCAGGCATGGGGCAGATCGCTTTTTACTAGATACTGTGCAGACCATGTATAAGACTTTACAAGAGGAGGCTGAGGCTGCGTCCAAAACCAAGTTCTCAAAGAATGCTGTCAGCCAAGAACAGTCGGCTGAGATTGCAAAAGAAAAGGGCAATCAAGCATACAAAGAAAAACAGTGGGAGAAGGCTATTGGTTGTTATACGGAAGCCATCAAACTTAACAGCAGAAATGCTACATATTACAGTAACAGGGCTGCAGCATATCTAGAGCTTGGACGGTTTCAGCAGGCAGAGGCAGATTGCAGTAAAGCTATTGACCTGGATAAAAAGGTGATTCGTTTAGGAAACTTTTGTGCTAATGTTAAATCCTTTTTACGAAGGGGTACAGCGAGGGAGATGCTTGGTTTCTACAAGGAAGCAATTGAAGATTTTAGTCATGCCCTTGTTCTTGAACCAACAAATAAAAGAGCATCAATATCTGCAGAGAGATTAAGAAAGCTGTTCTCAAGTTGA MEQLNEKLEISNRMIENFKSVRNEIRMAINSLLKDDGVLVIPTTADPPPKLGGKDFFSEEYQTRLFSSLSIASISGCCQVTLPLGFHDNCPVSMSFLARHGADRFLLDTVQTMYKTLQEEAEAASKTKFSKNAVSQEQSAEIAKEKGNQAYKEKQWEKAIGCYTEAIKLNSRNATYYSNRAAAYLELGRFQQAEADCSKAIDLDKKVIRLGNFCANVKSFLRRGTAREMLGFYKEAIEDFSHALVLEPTNKRASISAERLRKLFSS Homology
BLAST of CmoCh10G003550 vs. ExPASy Swiss-Prot
Match: Q9MUK5 (Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum OX=3888 GN=TOC64 PE=1 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 1.0e-97 Identity = 185/262 (70.61%), Postives = 217/262 (82.82%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy Swiss-Prot
Match: Q9LVH5 (Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP64 PE=1 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 1.0e-89 Identity = 174/262 (66.41%), Postives = 205/262 (78.24%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy Swiss-Prot
Match: F4KCL7 (Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OM64 PE=1 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.7e-66 Identity = 139/256 (54.30%), Postives = 177/256 (69.14%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy Swiss-Prot
Match: Q7XTK3 (Amidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AMI1 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 6.8e-25 Identity = 55/110 (50.00%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy Swiss-Prot
Match: Q9FR37 (Amidase 1 OS=Arabidopsis thaliana OX=3702 GN=AMI1 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.7e-21 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy TrEMBL
Match: A0A0A0LPY6 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025100 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 3.5e-125 Identity = 239/266 (89.85%), Postives = 250/266 (93.98%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy TrEMBL
Match: A0A5D3DXK3 (Outer envelope protein 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001310 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122 Identity = 234/265 (88.30%), Postives = 245/265 (92.45%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy TrEMBL
Match: A0A1S3BWF3 (outer envelope protein 64, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494184 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122 Identity = 234/265 (88.30%), Postives = 245/265 (92.45%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy TrEMBL
Match: A0A5A7UXC8 (Outer envelope protein 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004520 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 1.1e-121 Identity = 233/265 (87.92%), Postives = 245/265 (92.45%), Query Frame = 0
BLAST of CmoCh10G003550 vs. ExPASy TrEMBL
Match: A0A6J1C0D4 (outer envelope protein 64, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006920 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.1e-121 Identity = 229/265 (86.42%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of CmoCh10G003550 vs. NCBI nr
Match: XP_004137345.2 (outer envelope protein 64, chloroplastic [Cucumis sativus] >KGN63878.1 hypothetical protein Csa_013048 [Cucumis sativus]) HSP 1 Score: 457.6 bits (1176), Expect = 7.3e-125 Identity = 239/266 (89.85%), Postives = 250/266 (93.98%), Query Frame = 0
BLAST of CmoCh10G003550 vs. NCBI nr
Match: XP_038879210.1 (outer envelope protein 64, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 457.2 bits (1175), Expect = 9.6e-125 Identity = 238/266 (89.47%), Postives = 250/266 (93.98%), Query Frame = 0
BLAST of CmoCh10G003550 vs. NCBI nr
Match: XP_023530929.1 (uncharacterized protein LOC111793324 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 454.9 bits (1169), Expect = 4.7e-124 Identity = 238/266 (89.47%), Postives = 247/266 (92.86%), Query Frame = 0
BLAST of CmoCh10G003550 vs. NCBI nr
Match: KAG7021653.1 (Translocon at the outer membrane of chloroplasts 64 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 453.0 bits (1164), Expect = 1.8e-123 Identity = 236/266 (88.72%), Postives = 247/266 (92.86%), Query Frame = 0
BLAST of CmoCh10G003550 vs. NCBI nr
Match: XP_008453484.1 (PREDICTED: outer envelope protein 64, chloroplastic [Cucumis melo] >TYK28496.1 outer envelope protein 64 [Cucumis melo var. makuwa]) HSP 1 Score: 448.4 bits (1152), Expect = 4.4e-122 Identity = 234/265 (88.30%), Postives = 245/265 (92.45%), Query Frame = 0
BLAST of CmoCh10G003550 vs. TAIR 10
Match: AT3G17970.1 (translocon at the outer membrane of chloroplasts 64-III ) HSP 1 Score: 331.3 bits (848), Expect = 7.4e-91 Identity = 174/262 (66.41%), Postives = 205/262 (78.24%), Query Frame = 0
BLAST of CmoCh10G003550 vs. TAIR 10
Match: AT5G09420.1 (translocon at the outer membrane of chloroplasts 64-V ) HSP 1 Score: 253.4 bits (646), Expect = 2.0e-67 Identity = 139/256 (54.30%), Postives = 177/256 (69.14%), Query Frame = 0
BLAST of CmoCh10G003550 vs. TAIR 10
Match: AT1G08980.1 (amidase 1 ) HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of CmoCh10G003550 vs. TAIR 10
Match: AT1G56440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 3.7e-18 Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of CmoCh10G003550 vs. TAIR 10
Match: AT1G56440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 3.7e-18 Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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