CmoCh10G002930 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTCGTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCGTCTCATTCGCAGAATTCTGCTACCCAACCTTCCCCGCGCAAACACTTGGTTTGTTTCTTCTTTATTCTCCCTCTCCTTGTTTTTCTGCTGCTTTTGCTGATTCCTTTTGGGTTTCAATGACTTTGCAGGCCGATGCTGCAACCAATAATGACGGACTTTTTGATGCGGACGAGAAGAAACCCGATTTATCGGATCAATTTGAGTATGACCCTTTCTTATTCTTCCTCTCTGTGTTTGATTTGAAGTTTTCCTTTGTTTTTGAAGTCGAAATCGGTACTGTTTCAATGTCTCAACAGTTTCAACTGCATTTCCTTTCACTTCGCGATCTTTTGGATGGTTTTCCCTCCGATTTGTTTGAATATTTTATTGGCGAAATTTATGAATAACGCACGTTTCTGTTCTCTTGTTGTCTCTGCGAATCGAAATTGAACATGAAGTTTTAGGTTGCCATAAGTTGCACATGTTCTCTGTAATCTGCCTTCAGAAAACTTTCCGATCCATTTTATGAAAAAAGAGATGTATTAGAAGGGAAAAAGAAAACCCTAGTTCGTTGCTTGCATCATCTCTAGGTTTCGTCAGAACTTTTGTTCATCAATGAAAGATAAAATTGGGAAGACTCAGTTTTCCTCAAGCACAAGTATATAAAACTACTACAAATCGAACCTTAGATATTCAAGTTTGTGAGAGAGACATCATTGTCATATTAGTTCTGATTGGGAATGTCCTTTGTTCATCCATGAAATGTGAAGGTTTGAACTCATAACAGTCAGTTCTTGCTCTCTAGTTTATTAATACTCTGACTGAACTGAAATCATGGCAATTATCTTTCTAAACCTCCGAAGTTAAGTTATGAACAAGAACAACATCTGGAAGTTGTTTAATCTTGTTTTCTTCTTCTTTTTTTCAGTTCTCGCCTTCATGAAAACTTAGTTACTTCTCCTCTGCTGCATGATTGAATTTACTATTTTGATCTTTGTTAGCTCTCATACAGTGACTGCCTATTATATTACCGTCTGTTATTGATTTTTGTGAGATCCCACATTGGTCGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGAAAACCTCTTCCTACTAGACGCATTTTAAAACCTTGAGGGAAAGCTCAGAAGGGAAAGTCCAAAGAGGACATTGTTGCTAGAGAGGGTTTGGGCTGTTACAAATGGTATCAGAGCCAGAGGATACCAGCCCCCAAGGAAGGTGTATTGTGAGATCCTACGTCGGTTGGAGAGGGGAACGAAACATTTCTTATAAGGGTGTAGAAACCTCTTCCTAGAAGGACAATATTTGCTAGCGGTGGCTTGGGCTGTTACAATTTTAGAGTTCTTGATTTAGTGAAATATGAGGAGACAGTTGTGTTTCGTTTTTTTTTTTTTTCCCGATAACCGGAGGCATTGGGGGCAACTCATGGCCTCCACTCTCGGGAGACTTGGCCTACCTGGGCTTCGCCTGCAGAGACAACTATCTGTGTATTAGCTTGTTTAAGGGCTACACTTTGCTTGCTTCCAATTATTCGTATATTGAACGCATGCCAATATGCAATAGTCTCCTTTGGACCCTTTGATTACAATATCTAAATTAACAAGAAGTTGTTCTTGATTACGATAGTGGATCAGTGTCGTGCTATGTTCTTTATTGTTTCCAGAGATTTTGATAATTTCAACTCCATTGAGAAGTACAAGAAGTATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTTTCAAAGAAAAACCTCTATGGAGGTAGGTATAATTGGTATATCTCTTTATTATATTTATTGATGCCCCCATTATTCCTGCATATGGAAACATCCACCATTTTTGCAGGAAACATCTATGAAGAGAACACAACCATTGACGACGAGATTATAAAGTCGAGCAGGTATAATCGAGAATCAGCTATTCATTTATCCTCGTTCTTGTAATTGTGATGATCATGAGGTGAAGTCTGTATGAATCTGTGTTACAGGTGGCCTTGTACACGCTCATTTGCTGACCCTTTGCAGGGTTTTGAAGATCACAGAAGCAGCTGTTCAACATCCACCATGGAAATCCACGGTACCATCTCAAATGGGAAGAATGCTGTGAAGAAGAGTGGATGATATACTTAGGATTGAAGAAGATGAAGCTCAGTATAGATGATTCTTGGTAACGCATTTTAATTATTTTAAACGCTTTTTAACTATTGACAAATATTCGCATTTAAATTATTTTCATTTCTTACGTTCATCTTGGAGTATAAAGATTTGAACCTTCAACCTTAAGAAAAACTATAGAATAGATGGCGAGCCAAAATCTTTAAATATGTTAAAAAGTAGAGAGTAGTGTTTCTGATTCGACGAGATTCAATTTAAATTTTAATACAGTGATTAAGAATTCAAAAGAAAAGTCCTAATTCTTAACTGTTCTTCCCTAA ATGCCGTCGTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCGTCTCATTCGCAGAATTCTGCTACCCAACCTTCCCCGCGCAAACACTTGGCCGATGCTGCAACCAATAATGACGGACTTTTTGATGCGGACGAGAAGAAACCCGATTTATCGGATCAATTTGAAGATTTTGATAATTTCAACTCCATTGAGAAGTACAAGAAGTATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTTTCAAAGAAAAACCTCTATGGAGGTAGGTATAATTGGTATATCTCTTTATTATATTTATTGATGCCCCCATTATTCCTGCATATGGAAACATCCACCATTTTTGCAGGAAACATCTATGAAGAGAACACAACCATTGACGACGAGATTATAAAGTCGAGCAGGTGGCCTTGTACACGCTCATTTGCTGACCCTTTGCAGGGTTTTGAAGATCACAGAAGCAGCTGTTCAACATCCACCATGGAAATCCACGGTACCATCTCAAATGGGAAGAATGCTGTGAAGAAGAGTGGATGATATACTTAGGATTGAAGAAGATGAAGCTCAGTATAGATGATTCTTGGTAACGCATTTTAATTATTTTAAACGCTTTTTAACTATTGACAAATATTCGCATTTAAATTATTTTCATTTCTTACGTTCATCTTGGAGTATAAAGATTTGAACCTTCAACCTTAAGAAAAACTATAGAATAGATGGCGAGCCAAAATCTTTAAATATGTTAAAAAGTAGAGAGTAGTGTTTCTGATTCGACGAGATTCAATTTAAATTTTAATACAGTGATTAAGAATTCAAAAGAAAAGTCCTAATTCTTAACTGTTCTTCCCTAA ATGCCGTCGTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCGTCTCATTCGCAGAATTCTGCTACCCAACCTTCCCCGCGCAAACACTTGGCCGATGCTGCAACCAATAATGACGGACTTTTTGATGCGGACGAGAAGAAACCCGATTTATCGGATCAATTTGAAGATTTTGATAATTTCAACTCCATTGAGAAGTACAAGAAGTATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTTTCAAAGAAAAACCTCTATGGAGGTAGGTATAATTGGTATATCTCTTTATTATATTTATTGATGCCCCCATTATTCCTGCATATGGAAACATCCACCATTTTTGCAGGAAACATCTATGAAGAGAACACAACCATTGACGACGAGATTATAAAGTCGAGCAGGTGGCCTTGTACACGCTCATTTGCTGACCCTTTGCAGGGTTTTGAAGATCACAGAAGCAGCTGTTCAACATCCACCATGGAAATCCACGGTACCATCTCAAATGGGAAGAATGCTGTGAAGAAGAGTGGATGA MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLSDQFEDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGRYNWYISLLYLLMPPLFLHMETSTIFAGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKSG Homology
BLAST of CmoCh10G002930 vs. ExPASy TrEMBL
Match: A0A0A0LRW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015050 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61 Identity = 133/179 (74.30%), Postives = 143/179 (79.89%), Query Frame = 0
BLAST of CmoCh10G002930 vs. ExPASy TrEMBL
Match: A0A6J1BYF6 (uncharacterized protein LOC111006878 OS=Momordica charantia OX=3673 GN=LOC111006878 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 2.3e-59 Identity = 131/180 (72.78%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of CmoCh10G002930 vs. ExPASy TrEMBL
Match: A0A5D3BGU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00180 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 2.8e-57 Identity = 128/179 (71.51%), Postives = 140/179 (78.21%), Query Frame = 0
BLAST of CmoCh10G002930 vs. ExPASy TrEMBL
Match: A0A1S3BVY9 (uncharacterized protein LOC103494077 OS=Cucumis melo OX=3656 GN=LOC103494077 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 2.8e-57 Identity = 128/179 (71.51%), Postives = 140/179 (78.21%), Query Frame = 0
BLAST of CmoCh10G002930 vs. ExPASy TrEMBL
Match: A0A2I4G2J5 (uncharacterized protein LOC109004116 OS=Juglans regia OX=51240 GN=LOC109004116 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 6.0e-36 Identity = 95/182 (52.20%), Postives = 118/182 (64.84%), Query Frame = 0
BLAST of CmoCh10G002930 vs. NCBI nr
Match: KAG6589581.1 (hypothetical protein SDJN03_15004, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 278.9 bits (712), Expect = 3.1e-71 Identity = 150/179 (83.80%), Postives = 150/179 (83.80%), Query Frame = 0
BLAST of CmoCh10G002930 vs. NCBI nr
Match: KAG7023270.1 (hypothetical protein SDJN02_14295 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 255.4 bits (651), Expect = 3.7e-64 Identity = 150/229 (65.50%), Postives = 150/229 (65.50%), Query Frame = 0
BLAST of CmoCh10G002930 vs. NCBI nr
Match: KGN63759.1 (hypothetical protein Csa_014356 [Cucumis sativus]) HSP 1 Score: 245.0 bits (624), Expect = 5.0e-61 Identity = 133/179 (74.30%), Postives = 143/179 (79.89%), Query Frame = 0
BLAST of CmoCh10G002930 vs. NCBI nr
Match: XP_022134661.1 (uncharacterized protein LOC111006878 [Momordica charantia]) HSP 1 Score: 238.4 bits (607), Expect = 4.7e-59 Identity = 131/180 (72.78%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of CmoCh10G002930 vs. NCBI nr
Match: XP_008453324.1 (PREDICTED: uncharacterized protein LOC103494077 [Cucumis melo] >KAA0058023.1 uncharacterized protein E6C27_scaffold274G003280 [Cucumis melo var. makuwa] >TYJ98246.1 uncharacterized protein E5676_scaffold346G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 231.5 bits (589), Expect = 5.7e-57 Identity = 128/179 (71.51%), Postives = 140/179 (78.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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