CmoCh10G001070 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G001070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	VARLMGL domain-containing protein
Location	Cmo_Chr10: 461823 .. 462626 (-)
RNA-Seq Expression	CmoCh10G001070
Synteny	CmoCh10G001070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGCTCTCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATAAGGAAAGGCATCAGAACTTTCTGCAATGGCAACGCTTCTACCACCACTCTCAACCAACTCAAAACCAACCAGGATCAATTCCCCGTCTCGCCCGACCTGCATTCCAGACAAACCCCGCCGACCTTGGAGGAGATGATCTTACAGTTGGAACTAGAGGAGGAGACAGCAAGAAGGGCAAAACGTTACAACTACGACAAGATTCGAGGTCGCAGGATGTCGTGTGTAAACAACTCGGATATCTTGCGATCGGCACGGAATGCTTTGAATCAGTATCCTCGGTTTTCCCTGGATGGAAAGGATGCAATGTATAGATCTTCATTTAGGAACTTGGATGCTGCAGAAAGGTTTGGGCGGAAGTCAGTTTGCTGTGAATATGCTCTCAAAGGGAGAGTTCATGAAAATGAGTTCAATTTGACATTGGAGACAGCCTTACGGTTGCCATCAACGATAGCTGGAGAGAATGTCCTGTGGCGCAAACCAGGAGTGGTAGCTAAGTTGATGGGTCTTGAGGCAATGCCGATGCCAGTGAATGCTAGAAGTGGCAAAGCTACGTTGACCTCCATAATGAAGAGACAGAATCTAAGAAAAAGGGCTAAGAGGCATGAAAAAGAGAGAAGATTATCCATGGACTATCCTGGTTCCGATGGCACTATAACAGGAAGATTAAGTTCTTGCAGTTCAAACAATGGGTGCTATGTGGTGAAGCCAATTGCAACGGAATCAGCAGCTTGGAAAGCCAGCCAATTTCTTTAG

mRNA sequence

ATGAAGGAGCTCTCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATAAGGAAAGGCATCAGAACTTTCTGCAATGGCAACGCTTCTACCACCACTCTCAACCAACTCAAAACCAACCAGGATCAATTCCCCGTCTCGCCCGACCTGCATTCCAGACAAACCCCGCCGACCTTGGAGGAGATGATCTTACAGTTGGAACTAGAGGAGGAGACAGCAAGAAGGGCAAAACGTTACAACTACGACAAGATTCGAGGTCGCAGGATGTCGTGTGTAAACAACTCGGATATCTTGCGATCGGCACGGAATGCTTTGAATCAGTATCCTCGGTTTTCCCTGGATGGAAAGGATGCAATGTATAGATCTTCATTTAGGAACTTGGATGCTGCAGAAAGGTTTGGGCGGAAGTCAGTTTGCTGTGAATATGCTCTCAAAGGGAGAGTTCATGAAAATGAGTTCAATTTGACATTGGAGACAGCCTTACGGTTGCCATCAACGATAGCTGGAGAGAATGTCCTGTGGCGCAAACCAGGAGTGGTAGCTAAGTTGATGGGTCTTGAGGCAATGCCGATGCCAGTGAATGCTAGAAGTGGCAAAGCTACGTTGACCTCCATAATGAAGAGACAGAATCTAAGAAAAAGGGCTAAGAGGCATGAAAAAGAGAGAAGATTATCCATGGACTATCCTGGTTCCGATGGCACTATAACAGGAAGATTAAGTTCTTGCAGTTCAAACAATGGGTGCTATGTGGTGAAGCCAATTGCAACGGAATCAGCAGCTTGGAAAGCCAGCCAATTTCTTTAG

Coding sequence (CDS)

ATGAAGGAGCTCTCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATAAGGAAAGGCATCAGAACTTTCTGCAATGGCAACGCTTCTACCACCACTCTCAACCAACTCAAAACCAACCAGGATCAATTCCCCGTCTCGCCCGACCTGCATTCCAGACAAACCCCGCCGACCTTGGAGGAGATGATCTTACAGTTGGAACTAGAGGAGGAGACAGCAAGAAGGGCAAAACGTTACAACTACGACAAGATTCGAGGTCGCAGGATGTCGTGTGTAAACAACTCGGATATCTTGCGATCGGCACGGAATGCTTTGAATCAGTATCCTCGGTTTTCCCTGGATGGAAAGGATGCAATGTATAGATCTTCATTTAGGAACTTGGATGCTGCAGAAAGGTTTGGGCGGAAGTCAGTTTGCTGTGAATATGCTCTCAAAGGGAGAGTTCATGAAAATGAGTTCAATTTGACATTGGAGACAGCCTTACGGTTGCCATCAACGATAGCTGGAGAGAATGTCCTGTGGCGCAAACCAGGAGTGGTAGCTAAGTTGATGGGTCTTGAGGCAATGCCGATGCCAGTGAATGCTAGAAGTGGCAAAGCTACGTTGACCTCCATAATGAAGAGACAGAATCTAAGAAAAAGGGCTAAGAGGCATGAAAAAGAGAGAAGATTATCCATGGACTATCCTGGTTCCGATGGCACTATAACAGGAAGATTAAGTTCTTGCAGTTCAAACAATGGGTGCTATGTGGTGAAGCCAATTGCAACGGAATCAGCAGCTTGGAAAGCCAGCCAATTTCTTTAG

Protein sequence

MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLEEMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVVAKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLSSCSSNNGCYVVKPIATESAAWKASQFL

Homology

[Close]

BLAST of CmoCh10G001070 vs. ExPASy TrEMBL
Match: A0A0A0LNU8 (VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004160 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.3e-131
Identity = 240/267 (89.89%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MKELSFFLFKNSLAAK+RKG RTFCNG+ ST+TLNQ KTNQDQFP+SPDLH RQTPPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQQKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYD++RG RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRG-RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFRNLDAAER GRKSVCCEY LKGRVH+NEFNLTLETALRLPSTIAGENV+WRKPGVV
Sbjct: 121 RSSFRNLDAAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240
           AKLMGLEAMPMP+NARS KATLTSI+KRQ+LRKRAKR EKERR S+DYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAMPMPLNARSSKATLTSILKRQSLRKRAKRQEKERRFSVDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKASQFL 268
           SCSSNNGCY+VKPIATESAAW+A +FL
Sbjct: 241 SCSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of CmoCh10G001070 vs. ExPASy TrEMBL
Match: A0A5D3BIJ6 (VARLMGL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001160 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 237/267 (88.76%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MKELSFFLFKNSLAAK+RKG RTFCNG+ ST+TLNQ KTNQDQFP+SPDLH RQTPPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYD++RG RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRG-RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFRNLD AER GRKSVCCEY LKGRVH+NEFNLTLETALRLPSTIAGENV+WRKPGVV
Sbjct: 121 RSSFRNLDVAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240
           AKLMGLEA+PMP+NARS KATL SI+KRQ+LRKRAKR EKERR S+DYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAIPMPLNARSSKATLNSILKRQSLRKRAKRQEKERRFSVDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKASQFL 268
           SCSSNNGCY+VKPIATESAAW+A +FL
Sbjct: 241 SCSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of CmoCh10G001070 vs. ExPASy TrEMBL
Match: A0A6J1C1L3 (uncharacterized protein LOC111007440 OS=Momordica charantia OX=3673 GN=LOC111007440 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.2e-125
Identity = 233/267 (87.27%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MKELSFFLFKNSLAAK+RKGIRTFCNG+ ST+TLNQ K NQD FP+SPD+  R+ PPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGIRTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYD++RG RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRG-RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFRNLDAA   GRKSVCCEYALKGR+HENEFNLTLETALRLPSTIAGE+V+WRKPGVV
Sbjct: 121 RSSFRNLDAA---GRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240
           AKLMGLEA+PMPVNA+ GKA L+SI+KR NLR+RAKRHEKERR  MDYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAIPMPVNAKGGKAKLSSILKRHNLRRRAKRHEKERRFGMDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKASQFL 268
           SCSSNNGCYVVKPIATESAAWKA QFL
Sbjct: 241 SCSSNNGCYVVKPIATESAAWKARQFL 263

[Close]

BLAST of CmoCh10G001070 vs. ExPASy TrEMBL
Match: A0A6J1EVK1 (uncharacterized protein LOC111438186 OS=Cucurbita moschata OX=3662 GN=LOC111438186 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.4e-115
Identity = 221/269 (82.16%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MKELSFFLFKNSLAAK+RKG RTFCNG+ ST+TLNQ KTNQD FP SPD+   Q  PTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPASPDMSCTQNQPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMI+QLELEEETARR K  NY+++RG RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMIIQLELEEETARRTKLCNYNEMRG-RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFR  DAAE+ GRKSVCCEYAL+GR+HENEFNLTLETALRLPSTIAGE+V+WRKPGVV
Sbjct: 121 RSSFR--DAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRA--KRHEKERRLSMDYPGSDGTITGR 240
           AKLMGLEAMP PVNA  G A L+SI+K+Q+LRKRA  KRHEKERR  MDY GSDGTITGR
Sbjct: 181 AKLMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGR 240

Query: 241 LSSCSSNNGCYVVKPIATESAAWKASQFL 268
           LSSCSSNNG Y+VKPIATESAAWKA  FL
Sbjct: 241 LSSCSSNNGRYIVKPIATESAAWKARHFL 266

[Close]

BLAST of CmoCh10G001070 vs. ExPASy TrEMBL
Match: A0A6J1L4I6 (uncharacterized protein LOC111499822 OS=Cucurbita maxima OX=3661 GN=LOC111499822 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 221/269 (82.16%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MKELSFFLFKNSLAAK+RKG RTFCNG+ ST+TLNQ KTNQD FP SP++   Q  PTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPASPNMPCTQNQPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARR K  NYD++RG RMSCVNNSDILRSA+NALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRTKLCNYDEMRG-RMSCVNNSDILRSAQNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFR  DAAE+ GRKSVCCEYAL+GR+HENEFNLTLETALRLPSTIAGE+V+WRKPGVV
Sbjct: 121 RSSFR--DAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRA--KRHEKERRLSMDYPGSDGTITGR 240
           AKLMGLEAMP PVNA  G A L+SI+K+Q+LRKRA  KRHEKERR  MDY GSDGTITGR
Sbjct: 181 AKLMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGR 240

Query: 241 LSSCSSNNGCYVVKPIATESAAWKASQFL 268
           LSSCSSNNG Y+VKPIATESAAWKA  FL
Sbjct: 241 LSSCSSNNGRYIVKPIATESAAWKARHFL 266

[Close]

BLAST of CmoCh10G001070 vs. NCBI nr
Match: KAG6589427.1 (hypothetical protein SDJN03_14850, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139
Identity = 258/267 (96.63%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MK+LSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQ KTNQDQFPVSPDLH  QTPPTLE
Sbjct: 1   MKDLSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQHKTNQDQFPVSPDLHCGQTPPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYDKI+GRRMSCVNNSDIL SARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKCYNYDKIQGRRMSCVNNSDILGSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV
Sbjct: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240
           AKLMGLEAMPMP+NARSGKATL+SIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAMPMPMNARSGKATLSSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKASQFL 268
           SCSSNNGCYVVKPIATESAAWKASQFL
Sbjct: 241 SCSSNNGCYVVKPIATESAAWKASQFL 267

[Close]

BLAST of CmoCh10G001070 vs. NCBI nr
Match: KAG7023105.1 (hypothetical protein SDJN02_14130, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503.4 bits (1295), Expect = 1.2e-138
Identity = 257/267 (96.25%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MK+LSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQ KTNQDQFPVSPDLH  QTPPTLE
Sbjct: 1   MKDLSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQHKTNQDQFPVSPDLHCGQTPPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYDKI+GRRMSCVNNSDIL SARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKCYNYDKIQGRRMSCVNNSDILGSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFRNLDAAERF RKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV
Sbjct: 121 RSSFRNLDAAERFVRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240
           AKLMGLEAMPMP+NARSGKATL+SIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAMPMPMNARSGKATLSSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKASQFL 268
           SCSSNNGCYVVKPIATESAAWKASQFL
Sbjct: 241 SCSSNNGCYVVKPIATESAAWKASQFL 267

[Close]

BLAST of CmoCh10G001070 vs. NCBI nr
Match: XP_038878557.1 (uncharacterized protein LOC120070753 [Benincasa hispida])

HSP 1 Score: 482.3 bits (1240), Expect = 2.8e-132
Identity = 244/267 (91.39%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MKELSFFLFKNSLAAK+RKG RTFCNG+AST+TLNQ KTNQDQFP+SPDLH RQTPPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDASTSTLNQHKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYD++RG RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRG-RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFRNLDAAE+ GRKSVCCEY LKGR+HENEFNLTLETALRLPSTIAGENV+WRKPGVV
Sbjct: 121 RSSFRNLDAAEKAGRKSVCCEYGLKGRIHENEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240
           AKLMGLEAMPMP+NARS KATLTSI+KRQ+LRKRAKRHEKERR SMDYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAMPMPLNARSSKATLTSILKRQSLRKRAKRHEKERRFSMDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKASQFL 268
           SCSSNNGCYVVKPIATESAAWKA Q L
Sbjct: 241 SCSSNNGCYVVKPIATESAAWKARQCL 266

[Close]

BLAST of CmoCh10G001070 vs. NCBI nr
Match: XP_031736616.1 (uncharacterized protein LOC116402050 [Cucumis sativus] >KGN63550.1 hypothetical protein Csa_014042 [Cucumis sativus])

HSP 1 Score: 477.6 bits (1228), Expect = 6.9e-131
Identity = 240/267 (89.89%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MKELSFFLFKNSLAAK+RKG RTFCNG+ ST+TLNQ KTNQDQFP+SPDLH RQTPPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQQKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYD++RG RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRG-RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFRNLDAAER GRKSVCCEY LKGRVH+NEFNLTLETALRLPSTIAGENV+WRKPGVV
Sbjct: 121 RSSFRNLDAAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240
           AKLMGLEAMPMP+NARS KATLTSI+KRQ+LRKRAKR EKERR S+DYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAMPMPLNARSSKATLTSILKRQSLRKRAKRQEKERRFSVDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKASQFL 268
           SCSSNNGCY+VKPIATESAAW+A +FL
Sbjct: 241 SCSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of CmoCh10G001070 vs. NCBI nr
Match: KAA0057827.1 (hypothetical protein E6C27_scaffold274G001140 [Cucumis melo var. makuwa] >TYJ98511.1 hypothetical protein E5676_scaffold350G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 472.2 bits (1214), Expect = 2.9e-129
Identity = 237/267 (88.76%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQLKTNQDQFPVSPDLHSRQTPPTLE 60
           MKELSFFLFKNSLAAK+RKG RTFCNG+ ST+TLNQ KTNQDQFP+SPDLH RQTPPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKRYNYDKIRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYD++RG RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRG-RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180
           RSSFRNLD AER GRKSVCCEY LKGRVH+NEFNLTLETALRLPSTIAGENV+WRKPGVV
Sbjct: 121 RSSFRNLDVAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPMPVNARSGKATLTSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240
           AKLMGLEA+PMP+NARS KATL SI+KRQ+LRKRAKR EKERR S+DYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAIPMPLNARSSKATLNSILKRQSLRKRAKRQEKERRFSVDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKASQFL 268
           SCSSNNGCY+VKPIATESAAW+A +FL
Sbjct: 241 SCSSNNGCYIVKPIATESAAWRAREFL 266

The following BLAST results are available for this feature:

BLAST of CmoCh10G001070 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh10G001070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNU8	3.3e-131	89.89	VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004160 PE=...	[more]
A0A5D3BIJ6	1.4e-129	88.76	VARLMGL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1C1L3	1.2e-125	87.27	uncharacterized protein LOC111007440 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1EVK1	7.4e-115	82.16	uncharacterized protein LOC111438186 OS=Cucurbita moschata OX=3662 GN=LOC1114381...	[more]
A0A6J1L4I6	1.7e-114	82.16	uncharacterized protein LOC111499822 OS=Cucurbita maxima OX=3661 GN=LOC111499822...	[more]

BLAST of CmoCh10G001070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589427.1	1.1e-139	96.63	hypothetical protein SDJN03_14850, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023105.1	1.2e-138	96.25	hypothetical protein SDJN02_14130, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038878557.1	2.8e-132	91.39	uncharacterized protein LOC120070753 [Benincasa hispida]	[more]
XP_031736616.1	6.9e-131	89.89	uncharacterized protein LOC116402050 [Cucumis sativus] >KGN63550.1 hypothetical ...	[more]
KAA0057827.1	2.9e-129	88.76	hypothetical protein E6C27_scaffold274G001140 [Cucumis melo var. makuwa] >TYJ985...	[more]

BLAST of CmoCh10G001070 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032795	DUF3741-associated sequence motif	PFAM	PF14383	VARLMGL	coord: 175..190 e-value: 1.8E-6 score: 27.3
None	No IPR available	PANTHER	PTHR37897	DNAK FAMILY PROTEIN	coord: 1..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G001070.1	CmoCh10G001070.1	mRNA