CmoCh10G000560 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G000560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	MYND-type domain-containing protein
Location	Cmo_Chr10: 264332 .. 265974 (+)
RNA-Seq Expression	CmoCh10G000560
Synteny	CmoCh10G000560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGGTGGATTGGGTGTGTATATAAAAACCGCCCCTCGTTGGAATTCGTCTTTACCGAACGCACACAAAAAAGAATTGCGAAAAAGAGGAAGCCGAACGGTTACCATTTCCGATTTCCCGTACCAGAGGCATACAAAACACCGCCGCGCACCGCCGTACCACACTCCATAAACTCTACTCTCAACGCATGTAACCGGACCCAACACTGCAACATGATTTCTGCCAAGAGGCCAAGAACATGCCGCAATTTCGCCGCAGAATCCGATCTCTTTGATGTCTTGCCGGACGATCTCCTTATACACCTCCTTTGCCGCCTCGCCTCCTCCGCCTCTTCCCCTTCCGACCTTCTCAACCCTCTCTTGACGTAATTACATGCTTCTTTCCTTTCTCTTTTCCGGTTTCTGTTTTCTTTTTATCCCTTTCGATTCCGTTGGCGTTTGTTAATTTTTCGTCGCTTTTTGGATGATTTTGCAGATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTCTGTCTAAGGCCGGACCGAAGGCATTTGCAGTTAGAATGGAAAAATGGTGCGATTCCGCTCACCGTTTTCTCAAGCGCTGCGTTGACGCCGGTAACTCGGAAGCGAGTTACACGCTCGGAATGGTTTGTTCTTTTTGTTCCTTTGTTTTAAAAATATTGAAGAAATTGATACTCTGTATTTGGAGTGGGGATGGGGAATGATGATATCTCTGTTTTTTCCCCTGTAGATCCGATTTTATTGCTTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCTAAAGCAGCGATTAAATCTCACGCTCCGGCGCTATACTCTCTCGCCGTCATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGACAAGGATCTCCAGGCAGGTGTAGCCCTCTGTGCTCGAGCCGCTTTCCTCGGCCATGTGGACGCACTTCGAGAACTTGGCCACTGCCTTCAAGACGGTTACGGTGTGCGACGGAACACAGACGAAGGCCGCCGCCTTCTCATCCAAGCCAACGCCCGTGAGCTTGCTGCCGTTCTACTCTCCTCCTCGAGGGTACGGCAACAGCGCCACCACCAGTTCGGCAACCTCCCGGATTTGACGGCGACGCGTTGTTCATTGTTGAGCGATTTCGGCTGTGACTTTCCTGCGACGGAGCCACATCCGGTGAACCTGTTTTTGAGAGAATGGTTCGAATCGGAACGTGGAGTGGCTGCACGTGTGGGGCTGAGACTTTGCTCGCACGGAGGATGTGGTCGGCCGGAGACTCGGCCGCACGAGTTCCGGCGGTGTTCAATTTGTGGCACTGTAAATTACTGTTCAAGAGGATGCCAAGCTCAGGACTGGAAAGTTCGGCATAAAGAGGAGTGTACAGCCGTTCAGCGGTGGCAGGATGCGGAGGTTGACAACGCCGGCGGCGGCATGTTTAATGCTGTAGAAGAGGTTGAGGACGCCAACGTCGTGGGTACTGTATAAAATCGTAACAGCGCTGTAATTAGAGTTTTATTTATGGATATAAATGTAATTTTAGTATACAATTTTATTTTCCCTTATTTTCTTTTTAGGTTTTCAAATTATTTAAAAGAGAGAAAAAGGTCATCCGGTACTGGGAGATAGTTCTGGATAACCG

mRNA sequence

ATGAAATGGTGGATTGGGTGTGTATATAAAAACCGCCCCTCGTTGGAATTCGTCTTTACCGAACGCACACAAAAAAGAATTGCGAAAAAGAGGAAGCCGAACGGTTACCATTTCCGATTTCCCGTACCAGAGGCATACAAAACACCGCCGCGCACCGCCGTACCACACTCCATAAACTCTACTCTCAACGCATGTAACCGGACCCAACACTGCAACATGATTTCTGCCAAGAGGCCAAGAACATGCCGCAATTTCGCCGCAGAATCCGATCTCTTTGATGTCTTGCCGGACGATCTCCTTATACACCTCCTTTGCCGCCTCGCCTCCTCCGCCTCTTCCCCTTCCGACCTTCTCAACCCTCTCTTGACATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTCTGTCTAAGGCCGGACCGAAGGCATTTGCAGTTAGAATGGAAAAATGGTGCGATTCCGCTCACCGTTTTCTCAAGCGCTGCGTTGACGCCGGTAACTCGGAAGCGAGTTACACGCTCGGAATGATCCGATTTTATTGCTTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCTAAAGCAGCGATTAAATCTCACGCTCCGGCGCTATACTCTCTCGCCGTCATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGACAAGGATCTCCAGGCAGGTGTAGCCCTCTGTGCTCGAGCCGCTTTCCTCGGCCATGTGGACGCACTTCGAGAACTTGGCCACTGCCTTCAAGACGGTTACGGTGTGCGACGGAACACAGACGAAGGCCGCCGCCTTCTCATCCAAGCCAACGCCCGTGAGCTTGCTGCCGTTCTACTCTCCTCCTCGAGGGTACGGCAACAGCGCCACCACCAGTTCGGCAACCTCCCGGATTTGACGGCGACGCGTTGTTCATTGTTGAGCGATTTCGGCTGTGACTTTCCTGCGACGGAGCCACATCCGGTGAACCTGTTTTTGAGAGAATGGTTCGAATCGGAACGTGGAGTGGCTGCACGTGTGGGGCTGAGACTTTGCTCGCACGGAGGATGTGGTCGGCCGGAGACTCGGCCGCACGAGTTCCGGCGGTGTTCAATTTGTGGCACTGTAAATTACTGTTCAAGAGGATGCCAAGCTCAGGACTGGAAAGTTCGGCATAAAGAGGAGTGTACAGCCGTTCAGCGGTGGCAGGATGCGGAGGTTGACAACGCCGGCGGCGGCATGTTTAATGCTGTAGAAGAGGTTGAGGACGCCAACGTCGTGGGTACTGTATAAAATCGTAACAGCGCTGTAATTAGAGTTTTATTTATGGATATAAATGTAATTTTAGTATACAATTTTATTTTCCCTTATTTTCTTTTTAGGTTTTCAAATTATTTAAAAGAGAGAAAAAGGTCATCCGGTACTGGGAGATAGTTCTGGATAACCG

Coding sequence (CDS)

ATGAAATGGTGGATTGGGTGTGTATATAAAAACCGCCCCTCGTTGGAATTCGTCTTTACCGAACGCACACAAAAAAGAATTGCGAAAAAGAGGAAGCCGAACGGTTACCATTTCCGATTTCCCGTACCAGAGGCATACAAAACACCGCCGCGCACCGCCGTACCACACTCCATAAACTCTACTCTCAACGCATGTAACCGGACCCAACACTGCAACATGATTTCTGCCAAGAGGCCAAGAACATGCCGCAATTTCGCCGCAGAATCCGATCTCTTTGATGTCTTGCCGGACGATCTCCTTATACACCTCCTTTGCCGCCTCGCCTCCTCCGCCTCTTCCCCTTCCGACCTTCTCAACCCTCTCTTGACATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTCTGTCTAAGGCCGGACCGAAGGCATTTGCAGTTAGAATGGAAAAATGGTGCGATTCCGCTCACCGTTTTCTCAAGCGCTGCGTTGACGCCGGTAACTCGGAAGCGAGTTACACGCTCGGAATGATCCGATTTTATTGCTTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCTAAAGCAGCGATTAAATCTCACGCTCCGGCGCTATACTCTCTCGCCGTCATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGACAAGGATCTCCAGGCAGGTGTAGCCCTCTGTGCTCGAGCCGCTTTCCTCGGCCATGTGGACGCACTTCGAGAACTTGGCCACTGCCTTCAAGACGGTTACGGTGTGCGACGGAACACAGACGAAGGCCGCCGCCTTCTCATCCAAGCCAACGCCCGTGAGCTTGCTGCCGTTCTACTCTCCTCCTCGAGGGTACGGCAACAGCGCCACCACCAGTTCGGCAACCTCCCGGATTTGACGGCGACGCGTTGTTCATTGTTGAGCGATTTCGGCTGTGACTTTCCTGCGACGGAGCCACATCCGGTGAACCTGTTTTTGAGAGAATGGTTCGAATCGGAACGTGGAGTGGCTGCACGTGTGGGGCTGAGACTTTGCTCGCACGGAGGATGTGGTCGGCCGGAGACTCGGCCGCACGAGTTCCGGCGGTGTTCAATTTGTGGCACTGTAAATTACTGTTCAAGAGGATGCCAAGCTCAGGACTGGAAAGTTCGGCATAAAGAGGAGTGTACAGCCGTTCAGCGGTGGCAGGATGCGGAGGTTGACAACGCCGGCGGCGGCATGTTTAATGCTGTAGAAGAGGTTGAGGACGCCAACGTCGTGGGTACTGTATAA

Protein sequence

MKWWIGCVYKNRPSLEFVFTERTQKRIAKKRKPNGYHFRFPVPEAYKTPPRTAVPHSINSTLNACNRTQHCNMISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVLHPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFGCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNYCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV

Homology

[Close]

BLAST of CmoCh10G000560 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 4.0e-120
Identity = 212/331 (64.05%), Postives = 246/331 (74.32%), Query Frame = 0


Query: 89  SDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVLHPLVLSKAGPKAFAVR 148
           +DL D +PDDL+I +LC+L S++  P+D +N LLTCKRL  L ++P+VLS+  PKA AV+
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 149 MEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSL 208
              W + +HRFLKRCVDAG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 209 AVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLL 268
           AVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV +N  EGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 269 IQANARELAAVLLSSSRVRQQ----RHHQFGNLPDLTATRCSLLSDFGCDFPATEPHPVN 328
           +QANARELAAVL S  + R             +P+     C LLSDFGC+ PA E HP N
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 329 LFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNYCSRGCQAQDWKV 388
            FL +WF    G     GLRLCSH GCGRPETR HEFRRCS+CG VNYCSR CQA DWK+
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 389 RHKEECTAVQRWQD--------AEVDNAGGG 408
           RHK +C  VQRW +         ++D  G G
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGNVQIDGNGNG 371

[Close]

BLAST of CmoCh10G000560 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.8e-112
Identity = 211/322 (65.53%), Postives = 242/322 (75.16%), Query Frame = 0


Query: 92  FDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVLHPLVLSKAGPKAFAVRMEK 151
           F+ L DDL+I +L +LA+SASSPSD L  L TCKRLNRL LHPLVLSKAG +  AV  EK
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 152 WCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 211
           W DS+H+FLK CV+AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 212 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQA 271
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV R+  EGRRLLIQA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 272 NARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFGCDFPATEPHPVNLFLREWF 331
           NARELA  L S   ++    ++   L DL+              P  E HPVN FL+EWF
Sbjct: 202 NARELACSLRSYLSLKSGDENE--TLTDLSVV------------PVQEIHPVNRFLKEWF 261

Query: 332 ESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNYCSRGCQAQDWKVRHKEECT 391
            S R V    GLR+CSHGGCGRPETR HEFRRCS+CG VNYCSRGCQA DW+ +HK ECT
Sbjct: 262 SSGR-VDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECT 321

Query: 392 AVQRWQDAEVDNAGGGMFNAVE 414
            +  W  A  +    G   AVE
Sbjct: 322 PLDLWVAAAAEIGDDGEAVAVE 328

[Close]

BLAST of CmoCh10G000560 vs. ExPASy TrEMBL
Match: A0A6J1E1B7 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.6e-204
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 312
           DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 313 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 372
           CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 373 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 425
           CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

[Close]

BLAST of CmoCh10G000560 vs. ExPASy TrEMBL
Match: A0A6J1JFU9 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111484746 PE=4 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 4.5e-199
Identity = 343/352 (97.44%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           M SAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLN LLTCKRLNRLVL
Sbjct: 1   MSSAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRC DAGNSEASYTLGMIRFYCL NRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCADAGNSEASYTLGMIRFYCLTNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 312
           DGYGVRRN+DEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 313 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 372
           CDFPATEPHPVNLFLREWFESERGVA RVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAGRVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 373 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 425
           CSRGCQ+QDWK+RHKEECTAVQRWQDAEVDNAGG MFNAVEEVEDANVVGTV
Sbjct: 301 CSRGCQSQDWKIRHKEECTAVQRWQDAEVDNAGGVMFNAVEEVEDANVVGTV 352

[Close]

BLAST of CmoCh10G000560 vs. ExPASy TrEMBL
Match: A0A5D3BGS7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 4.9e-177
Identity = 312/354 (88.14%), Postives = 329/354 (92.94%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           MIS KRPRT RNF A+SDLFDVLPDDLLIHLLC LA+SASSPSDLLN LLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRM+ WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRV-RQQRHHQFGNLPDLTATRCSLLSDF 312
           DGYGVR+N+DEGRRLL+QANARELA VLLSSS + +QQRH+Q GNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 313 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 372
           GC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSH GCGR ETRPHEFRRCS+CGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 373 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDA-NVVGTV 425
           YCSRGCQAQDWKVRHKEECT VQRW+D + +NA G MF+ VEEVEDA N+VG V
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNA-GEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of CmoCh10G000560 vs. ExPASy TrEMBL
Match: A0A1S3CLL0 (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 4.9e-177
Identity = 312/354 (88.14%), Postives = 329/354 (92.94%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           MIS KRPRT RNF A+SDLFDVLPDDLLIHLLC LA+SASSPSDLLN LLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRM+ WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRV-RQQRHHQFGNLPDLTATRCSLLSDF 312
           DGYGVR+N+DEGRRLL+QANARELA VLLSSS + +QQRH+Q GNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 313 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 372
           GC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSH GCGR ETRPHEFRRCS+CGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 373 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDA-NVVGTV 425
           YCSRGCQAQDWKVRHKEECT VQRW+D + +NA G MF+ VEEVEDA N+VG V
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNA-GEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of CmoCh10G000560 vs. ExPASy TrEMBL
Match: A0A5A7UPI5 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 8.3e-177
Identity = 312/354 (88.14%), Postives = 329/354 (92.94%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           MIS KRPRT RNF A+SDLFDVLPDDLLIHLLCRLA+SASSPSDLLN LLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRM+ WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRV-RQQRHHQFGNLPDLTATRCSLLSDF 312
           DGYGVR+N+DEGRRLL+QANARELA VLLSSS + +QQRH+Q GNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 313 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 372
           GC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSH GCGR ETRPHEFRRCS+CGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 373 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDA-NVVGTV 425
           YCSRGCQAQDWKVRHKEECT VQRW+D + +NA   MF+ VEEVEDA N+VG V
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNA-DEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of CmoCh10G000560 vs. NCBI nr
Match: KAG6589385.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 864.4 bits (2232), Expect = 4.1e-247
Identity = 418/424 (98.58%), Postives = 421/424 (99.29%), Query Frame = 0


Query: 1   MKWWIGCVYKNRPSLEFVFTERTQKRIAKKRKPNGYHFRFPVPEAYKTPPRTAVPHSINS 60
           MKWWIGCVYKNRPSLEFVFTERTQKRI KKR+PNGY FRFPVPEAYKTPPRTAVPHSINS
Sbjct: 1   MKWWIGCVYKNRPSLEFVFTERTQKRIVKKREPNGYPFRFPVPEAYKTPPRTAVPHSINS 60

Query: 61  TLNACNRTQHCNMISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNP 120
           TLNACNRTQHCNMISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLN 
Sbjct: 61  TLNACNRTQHCNMISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNL 120

Query: 121 LLTCKRLNRLVLHPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRF 180
           LLTCKRLNRLVLHPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRF
Sbjct: 121 LLTCKRLNRLVLHPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRF 180

Query: 181 YCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGH 240
           YCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGH
Sbjct: 181 YCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGH 240

Query: 241 VDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDL 300
           VDALRELGHCLQDGYGVRRN+DEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDL
Sbjct: 241 VDALRELGHCLQDGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDL 300

Query: 301 TATRCSLLSDFGCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHE 360
           TATRCSLLSDFGCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHE
Sbjct: 301 TATRCSLLSDFGCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHE 360

Query: 361 FRRCSICGTVNYCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANV 420
           FRRCSICGTVNYCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANV
Sbjct: 361 FRRCSICGTVNYCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANV 420

Query: 421 VGTV 425
           VGTV
Sbjct: 421 VGTV 424

[Close]

BLAST of CmoCh10G000560 vs. NCBI nr
Match: XP_022921747.1 (F-box protein At1g67340-like [Cucurbita moschata])

HSP 1 Score: 721.8 bits (1862), Expect = 3.3e-204
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 312
           DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 313 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 372
           CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 373 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 425
           CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

[Close]

BLAST of CmoCh10G000560 vs. NCBI nr
Match: KAG7023063.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 715.3 bits (1845), Expect = 3.1e-202
Identity = 349/352 (99.15%), Postives = 351/352 (99.72%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLN LLTCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 312
           DGYGVRRN+DEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 313 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 372
           CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 373 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 425
           CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

[Close]

BLAST of CmoCh10G000560 vs. NCBI nr
Match: XP_023516460.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 714.9 bits (1844), Expect = 4.1e-202
Identity = 349/352 (99.15%), Postives = 351/352 (99.72%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLN LLTCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 312
           DGYGVRRN+DEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 313 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 372
           CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 373 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 425
           CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGG+FNAVEEVEDANVVGTV
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGIFNAVEEVEDANVVGTV 352

[Close]

BLAST of CmoCh10G000560 vs. NCBI nr
Match: XP_022987090.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 703.7 bits (1815), Expect = 9.3e-199
Identity = 343/352 (97.44%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 132
           M SAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLN LLTCKRLNRLVL
Sbjct: 1   MSSAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192
           HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRC DAGNSEASYTLGMIRFYCL NRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCADAGNSEASYTLGMIRFYCLTNRGSGASL 120

Query: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 253 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 312
           DGYGVRRN+DEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 313 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 372
           CDFPATEPHPVNLFLREWFESERGVA RVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAGRVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 373 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 425
           CSRGCQ+QDWK+RHKEECTAVQRWQDAEVDNAGG MFNAVEEVEDANVVGTV
Sbjct: 301 CSRGCQSQDWKIRHKEECTAVQRWQDAEVDNAGGVMFNAVEEVEDANVVGTV 352

[Close]

BLAST of CmoCh10G000560 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 433.0 bits (1112), Expect = 2.9e-121
Identity = 212/331 (64.05%), Postives = 246/331 (74.32%), Query Frame = 0


Query: 89  SDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVLHPLVLSKAGPKAFAVR 148
           +DL D +PDDL+I +LC+L S++  P+D +N LLTCKRL  L ++P+VLS+  PKA AV+
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 149 MEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSL 208
              W + +HRFLKRCVDAG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 209 AVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLL 268
           AVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV +N  EGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 269 IQANARELAAVLLSSSRVRQQ----RHHQFGNLPDLTATRCSLLSDFGCDFPATEPHPVN 328
           +QANARELAAVL S  + R             +P+     C LLSDFGC+ PA E HP N
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 329 LFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNYCSRGCQAQDWKV 388
            FL +WF    G     GLRLCSH GCGRPETR HEFRRCS+CG VNYCSR CQA DWK+
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 389 RHKEECTAVQRWQD--------AEVDNAGGG 408
           RHK +C  VQRW +         ++D  G G
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGNVQIDGNGNG 371

[Close]

BLAST of CmoCh10G000560 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-113
Identity = 211/322 (65.53%), Postives = 242/322 (75.16%), Query Frame = 0


Query: 92  FDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVLHPLVLSKAGPKAFAVRMEK 151
           F+ L DDL+I +L +LA+SASSPSD L  L TCKRLNRL LHPLVLSKAG +  AV  EK
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 152 WCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 211
           W DS+H+FLK CV+AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 212 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQA 271
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV R+  EGRRLLIQA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 272 NARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFGCDFPATEPHPVNLFLREWF 331
           NARELA  L S   ++    ++   L DL+              P  E HPVN FL+EWF
Sbjct: 202 NARELACSLRSYLSLKSGDENE--TLTDLSVV------------PVQEIHPVNRFLKEWF 261

Query: 332 ESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNYCSRGCQAQDWKVRHKEECT 391
            S R V    GLR+CSHGGCGRPETR HEFRRCS+CG VNYCSRGCQA DW+ +HK ECT
Sbjct: 262 SSGR-VDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECT 321

Query: 392 AVQRWQDAEVDNAGGGMFNAVE 414
            +  W  A  +    G   AVE
Sbjct: 322 PLDLWVAAAAEIGDDGEAVAVE 328

[Close]

BLAST of CmoCh10G000560 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 43.9 bits (102), Expect = 3.7e-04
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 363 RCSICGTVNYCSRGCQAQDWKVRHKEECTAVQ 395
           RCS C +V YCS  CQ   W+V HK+EC  V+
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of CmoCh10G000560 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 43.9 bits (102), Expect = 3.7e-04
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 363 RCSICGTVNYCSRGCQAQDWKVRHKEECTAVQ 395
           RCS C +V YCS  CQ   W+V HK+EC  V+
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of CmoCh10G000560 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 43.5 bits (101), Expect = 4.9e-04
Identity = 18/40 (45.00%), Postives = 23/40 (57.50%), Query Frame = 0


Query: 351 CGRPETRPHEFRRCSICGTVNYCSRGCQAQDWKVRHKEEC 391
           CG+  T     ++CS C +V YCS  CQ  DWK  HK +C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

The following BLAST results are available for this feature:

BLAST of CmoCh10G000560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	4.0e-120	64.05	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.8e-112	65.53	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]

BLAST of CmoCh10G000560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1B7	1.6e-204	100.00	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 ...	[more]
A0A6J1JFU9	4.5e-199	97.44	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111484746 PE=4 SV...	[more]
A0A5D3BGS7	4.9e-177	88.14	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 ...	[more]
A0A1S3CLL0	4.9e-177	88.14	F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1	[more]
A0A5A7UPI5	8.3e-177	88.14	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 ...	[more]

BLAST of CmoCh10G000560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589385.1	4.1e-247	98.58	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022921747.1	3.3e-204	100.00	F-box protein At1g67340-like [Cucurbita moschata]	[more]
KAG7023063.1	3.1e-202	99.15	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023516460.1	4.1e-202	99.15	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987090.1	9.3e-199	97.44	F-box protein At1g67340-like [Cucurbita maxima]	[more]

BLAST of CmoCh10G000560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	2.9e-121	64.05	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	1.3e-113	65.53	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT1G17110.1	3.7e-04	53.13	ubiquitin-specific protease 15	[more]
AT1G17110.2	3.7e-04	53.13	ubiquitin-specific protease 15	[more]
AT2G24640.1	4.9e-04	45.00	ubiquitin-specific protease 19	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.2220		coord: 330..397 e-value: 6.8E-11 score: 43.7
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 73..415
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 145..272
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 345..395
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 351..390 e-value: 1.1E-7 score: 31.8
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 348..390 score: 11.015005
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 146..293 e-value: 1.1E-17 score: 66.5
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 73..415
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 88..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G000560.1	CmoCh10G000560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding