CmoCh10G000290 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G000290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CASP-like protein
Location	Cmo_Chr10: 156780 .. 157749 (-)
RNA-Seq Expression	CmoCh10G000290
Synteny	CmoCh10G000290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATACCCCTTCTTTCTATGTAACCACACCATTCATCTCATTAACATTTCATTTCTTTCTTCTTCTTCTTCCTCCTCCCATAATAATCTAATATGGCCGATAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACGCTGGCCGCCATCTGGACCCTCGTCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAGTAACTCCCTACTCCCTACTCCCTACTCCCTACTCTTTTTTGTTTTCCATATATTTGATCCAAAATTGATTTTATGGCGCAGATTCTTTGCCATAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAACCGTCAAAGAAACTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGGTGGTCGCCCATCTGTGACCAATTCGGCAAGTTTTGCAATCGCATCGCCATTTCCATCGCCATCTCTTATTTTGCCGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCAAACCCAACCAAACTCCACCGCTAATTTGGCCCATTTTGTTGTTGTGTGAACTCCGGTCGGAAATTTGGGAATGGCGAGGTTTGGTTAATGGGTATAGTGACGATGTGTGCATTTTCCATCTTCTTTGTCCTTACCTTCTGTGTCGCAACCGCATAACTGATGTTTTTGGTTTTTTCTCGTTCTCATAAATTTGCTTTCTACCTTTCTTCCTTTTACTAATTAATTGCATAATATAACATACTTTCTATCTTCAATTCACTTCAACGTGG

mRNA sequence

ATTAATACCCCTTCTTTCTATGTAACCACACCATTCATCTCATTAACATTTCATTTCTTTCTTCTTCTTCTTCCTCCTCCCATAATAATCTAATATGGCCGATAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACGCTGGCCGCCATCTGGACCCTCGTCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAATTCTTTGCCATAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAACCGTCAAAGAAACTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGGTGGTCGCCCATCTGTGACCAATTCGGCAAGTTTTGCAATCGCATCGCCATTTCCATCGCCATCTCTTATTTTGCCGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCAAACCCAACCAAACTCCACCGCTAATTTGGCCCATTTTGTTGTTGTGTGAACTCCGGTCGGAAATTTGGGAATGGCGAGGTTTGGTTAATGGGTATAGTGACGATGTGTGCATTTTCCATCTTCTTTGTCCTTACCTTCTGTGTCGCAACCGCATAACTGATGTTTTTGGTTTTTTCTCGTTCTCATAAATTTGCTTTCTACCTTTCTTCCTTTTACTAATTAATTGCATAATATAACATACTTTCTATCTTCAATTCACTTCAACGTGG

Coding sequence (CDS)

ATGGCCGATAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACGCTGGCCGCCATCTGGACCCTCGTCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAATTCTTTGCCATAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAACCGTCAAAGAAACTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGGTGGTCGCCCATCTGTGACCAATTCGGCAAGTTTTGCAATCGCATCGCCATTTCCATCGCCATCTCTTATTTTGCCGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCAAACCCAACCAAACTCCACCGCTAA

Protein sequence

MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKLHR

Homology

[Close]

BLAST of CmoCh10G000290 vs. ExPASy Swiss-Prot
Match: B9RA90 (CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.5e-42
Identity = 93/179 (51.96%), Postives = 124/179 (69.27%), Query Frame = 0


Query: 5   NVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSS 64
           NVE +  S      L++ +QI LR + I +TLAA W +VT KQS+    F + A+Y+YSS
Sbjct: 3   NVEDKYNSPLKSQKLFIGAQICLRIVTIGATLAATWIMVTDKQSITFGDFVMVAKYNYSS 62

Query: 65  AFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRN----FFFFVHDLLMMGLVLSGC 124
           AFKFF +AN IAC   ++S+ F+       ALG    N    F  F+HDLLMM LVL+GC
Sbjct: 63  AFKFFVLANVIACACSVVSLLFL------CALGRYSSNPGHVFLLFLHDLLMMSLVLAGC 122

Query: 125 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTK 180
           +AATAIGF+G+YGNT +GW PICDQFG+FCNR  IS+ +SY +++CLLILT+ SAN ++
Sbjct: 123 SAATAIGFLGKYGNTKSGWMPICDQFGQFCNRGTISMMLSYLSMVCLLILTVTSANKSR 175

[Close]

BLAST of CmoCh10G000290 vs. ExPASy Swiss-Prot
Match: A7PHN8 (CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 4.7e-41
Identity = 93/178 (52.25%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 8   LEAKSQ-----GPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSY 67
           +EAK Q     G H  L+L + I LR L +++TL A W ++T+KQ+V ++G  ++A+YSY
Sbjct: 29  IEAKFQQNPPLGTH-KLFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSY 88

Query: 68  SSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFF-FVHDLLMMGLVLSGCA 127
           SSAFKFF+ ANAIACG    SV  +F +      G+    FFF F+HDL MM LVL+GCA
Sbjct: 89  SSAFKFFSYANAIACG---CSVLTLFPAFSLFYRGSTPMKFFFLFLHDLCMMSLVLAGCA 148

Query: 128 AATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTK 180
           AATAIG+VGRYGN H GW  ICDQF ++CNRI +S+  SY A + +L+LTI+SAN ++
Sbjct: 149 AATAIGYVGRYGNNHAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMSANKSR 202

[Close]

BLAST of CmoCh10G000290 vs. ExPASy Swiss-Prot
Match: B9I3X5 (CASP-like protein 1F2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823430 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-38
Identity = 83/179 (46.37%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MAD   +          N+++ +QI LR +VI+++ A+ W ++T KQ++ I GF LDA Y
Sbjct: 1   MADIETKSSQNQPLKTQNIFIGAQIFLRIVVIAASFASTWLMLTNKQTIDIGGFVLDANY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYS  FKF + AN +   F  +S+ F+ +  R+ +  N    F  F+HDL +M LVL GC
Sbjct: 61  SYSPEFKFLSYANIVVGAFSFVSLLFLVLVGRRSS--NPTYYFILFLHDLALMSLVLGGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTK 180
           AAAT IG +G+YGN+HTGW  ICD FGKFC R   S+A SYF+++CLLILTI SA+ ++
Sbjct: 121 AAATVIGSLGKYGNSHTGWMQICDHFGKFCKRATTSVAFSYFSLVCLLILTITSASKSR 177

[Close]

BLAST of CmoCh10G000290 vs. ExPASy Swiss-Prot
Match: B9IFI5 (CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 82/179 (45.81%), Postives = 114/179 (63.69%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           M +N  +           L++  QI  R + I++++A+ W ++T+KQ + I G  LDARY
Sbjct: 1   MPNNEAKFSVNQPLKTQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYS  FKF A  N +   F LLS+ F+ +  RQ +  N    FF F+HDL MM LV+ GC
Sbjct: 61  SYSPEFKFLAFTNIVVGCFSLLSLLFLVLVVRQGS--NPNHYFFLFLHDLAMMSLVVGGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTK 180
           AAAT +GF+G++GN+HTGW  ICD FGKFCNR   S+ ISY  ++CL ILTI SA+ ++
Sbjct: 121 AAATTVGFLGKHGNSHTGWMQICDNFGKFCNRAQTSVTISYLNLICLSILTITSASKSR 177

[Close]

BLAST of CmoCh10G000290 vs. ExPASy Swiss-Prot
Match: B9RH17 (CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.6e-33
Identity = 70/158 (44.30%), Postives = 113/158 (71.52%), Query Frame = 0


Query: 19  LYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSSAFKFFAIANAIACG 78
           ++  +Q+I R L I+  +A+I  +VT+ Q+V++FG    ARYSYSSAF+F   ANA+ CG
Sbjct: 30  IFFMAQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFRFLVGANAVVCG 89

Query: 79  FCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHTG 138
           F +LS+ FV + +R+ +    ++N++ F+HD++MM +++SGC+AATAIG+VGRYG     
Sbjct: 90  FSVLSLIFVCLMSRR-SEAILEKNYYLFLHDMVMMVMMVSGCSAATAIGYVGRYGEKEIT 149

Query: 139 WSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISAN 177
           W+ +CD  GKFCN+  +SI ++Y A+ C + LT ++A+
Sbjct: 150 WTAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAAH 186

[Close]

BLAST of CmoCh10G000290 vs. ExPASy TrEMBL
Match: A0A6J1E119 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429832 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY
Sbjct: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKL 180
           AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKL
Sbjct: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKL 180

Query: 181 HR 183
           HR
Sbjct: 181 HR 182

[Close]

BLAST of CmoCh10G000290 vs. ExPASy TrEMBL
Match: A0A6J1JE80 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484991 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87
Identity = 172/182 (94.51%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           M DNNVELEAKSQG HA LYLSSQIILRA VISSTLAA WTL+TAKQSVVIFGFTLDARY
Sbjct: 1   MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYSSAFKFFAIANA+ACGFCLLSVCFVFISTRQLALG+RQRNFFFFVHDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKL 180
           AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRI ISIAISYFAVLCLLILTIISANPTKL
Sbjct: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTKL 180

Query: 181 HR 183
            R
Sbjct: 181 QR 182

[Close]

BLAST of CmoCh10G000290 vs. ExPASy TrEMBL
Match: A0A6J1C084 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006880 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55
Identity = 117/175 (66.86%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MAD  +ELE+       NL+L SQ ILR LVI+STLAA W ++TAKQSV++FG  LDARY
Sbjct: 1   MAD--IELESNKSNTSHNLHLCSQTILRGLVIASTLAAAWLMLTAKQSVIVFGIPLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYS AFKFFA+ANAIACGFC LSV  +F+ + +L   + Q N+  F+HDLLMM LV SGC
Sbjct: 61  SYSPAFKFFALANAIACGFCFLSVLLLFVLSHRL---HNQPNYILFLHDLLMMVLVASGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISA 176
           AA+TAIG+VG+YGN+HTGWSPICD FGKFCNR+  S+AISY AV+CLLILTIISA
Sbjct: 121 AASTAIGYVGKYGNSHTGWSPICDHFGKFCNRVTTSVAISYLAVICLLILTIISA 170

[Close]

BLAST of CmoCh10G000290 vs. ExPASy TrEMBL
Match: A0A5A7UPF9 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00240 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 4.0e-51
Identity = 117/181 (64.64%), Postives = 139/181 (76.80%), Query Frame = 0


Query: 4   NNVELEAKSQGPH-------ANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTL 63
           N++ELE+KS   H        NL+L SQIILR LVISSTLAA W ++TAKQSV++FG   
Sbjct: 7   NDMELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPF 66

Query: 64  DARYSYSSAFKFFAIANAIACGFCLLSVCF-VFISTRQLAL--GNRQRNFFFFVHDLLMM 123
           DARY+YSSAF+FFA ANAIA  FC LS+CF +F STR  +    N    FFF +HDLLMM
Sbjct: 67  DARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMM 126

Query: 124 GLVLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTII 175
           GLVLSGC+AATAIG+VG+YGNTH GWSPIC+ F  FCNR+  SIAISY +V+CLLILTI+
Sbjct: 127 GLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTIL 186

[Close]

BLAST of CmoCh10G000290 vs. ExPASy TrEMBL
Match: A0A5D3BHA2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00240 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.8e-51
Identity = 117/180 (65.00%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 4   NNVELEAKS------QGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLD 63
           N++ELE+KS      Q    NL+L SQIILR LVISSTLAA W ++TAKQSV++FG   D
Sbjct: 7   NDMELESKSCSHRHDQPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFD 66

Query: 64  ARYSYSSAFKFFAIANAIACGFCLLSVCF-VFISTRQLAL--GNRQRNFFFFVHDLLMMG 123
           ARY+YSSAF+FFA ANAIA  FC LS+CF +F STR  +    N    FFF +HDLLMMG
Sbjct: 67  ARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMG 126

Query: 124 LVLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIIS 175
           LVLSGC+AATAIG+VG+YGNTH GWSPIC+ F  FCNR+  SIAISY +V+CLLILTI+S
Sbjct: 127 LVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILS 186

[Close]

BLAST of CmoCh10G000290 vs. NCBI nr
Match: XP_022921629.1 (CASP-like protein 1F1 [Cucurbita moschata])

HSP 1 Score: 352.1 bits (902), Expect = 3.0e-93
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY
Sbjct: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKL 180
           AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKL
Sbjct: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKL 180

Query: 181 HR 183
           HR
Sbjct: 181 HR 182

[Close]

BLAST of CmoCh10G000290 vs. NCBI nr
Match: XP_022987446.1 (CASP-like protein 1F1 [Cucurbita maxima])

HSP 1 Score: 332.4 bits (851), Expect = 2.4e-87
Identity = 172/182 (94.51%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           M DNNVELEAKSQG HA LYLSSQIILRA VISSTLAA WTL+TAKQSVVIFGFTLDARY
Sbjct: 1   MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYSSAFKFFAIANA+ACGFCLLSVCFVFISTRQLALG+RQRNFFFFVHDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKL 180
           AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRI ISIAISYFAVLCLLILTIISANPTKL
Sbjct: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTKL 180

Query: 181 HR 183
            R
Sbjct: 181 QR 182

[Close]

BLAST of CmoCh10G000290 vs. NCBI nr
Match: XP_023516133.1 (CASP-like protein 1F1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 173/187 (92.51%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 1   MAD-NNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDAR 60
           MAD NNVELEAKSQGPHANLYLSSQIILRALVISSTLAA WTL TAKQSVVIFGFTLDAR
Sbjct: 1   MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR 60

Query: 61  YSYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRN----FFFFVHDLLMMGL 120
           YSYSSAFKFFA+ANAIACGFCLLS+CFVFIS+RQLALGNRQRN    FFFFVHDLLMMGL
Sbjct: 61  YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGL 120

Query: 121 VLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISA 180
           V+SGCAAATAIGFVGRYGNTHTGWSPICDQF KFCNRI ISIAISYFAVLCLLILTIISA
Sbjct: 121 VVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 180

Query: 181 NPTKLHR 183
            PTKLHR
Sbjct: 181 YPTKLHR 187

[Close]

BLAST of CmoCh10G000290 vs. NCBI nr
Match: KAG6589353.1 (CASP-like protein 1F1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-60
Identity = 134/157 (85.35%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY
Sbjct: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALG+RQRNFFFF HDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISI 158
           AAATAIGFVG   +  T  SP        C+   IS+
Sbjct: 121 AAATAIGFVGSEPHIATP-SPFAPHRHPHCHAHLISL 156

[Close]

BLAST of CmoCh10G000290 vs. NCBI nr
Match: XP_022134667.1 (CASP-like protein 1F2 [Momordica charantia] >XP_022134668.1 CASP-like protein 1F2 [Momordica charantia])

HSP 1 Score: 224.9 bits (572), Expect = 5.5e-55
Identity = 117/175 (66.86%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MAD  +ELE+       NL+L SQ ILR LVI+STLAA W ++TAKQSV++FG  LDARY
Sbjct: 1   MAD--IELESNKSNTSHNLHLCSQTILRGLVIASTLAAAWLMLTAKQSVIVFGIPLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120
           SYS AFKFFA+ANAIACGFC LSV  +F+ + +L   + Q N+  F+HDLLMM LV SGC
Sbjct: 61  SYSPAFKFFALANAIACGFCFLSVLLLFVLSHRL---HNQPNYILFLHDLLMMVLVASGC 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISA 176
           AA+TAIG+VG+YGN+HTGWSPICD FGKFCNR+  S+AISY AV+CLLILTIISA
Sbjct: 121 AASTAIGYVGKYGNSHTGWSPICDHFGKFCNRVTTSVAISYLAVICLLILTIISA 170

[Close]

BLAST of CmoCh10G000290 vs. TAIR 10
Match: AT4G25040.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 54/161 (33.54%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 19  LYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSSAFKFFAIANAIACG 78
           L L  Q+ +R L I + +A++W ++T ++   ++G   +A+YSYSSAF++   A    C 
Sbjct: 13  LNLGVQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCA 72

Query: 79  FCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHTG 138
             L ++ +  ++ R+  L      F  F  DLL     +S  +AA A G+VG+YGN   G
Sbjct: 73  ATLFTLVWACLAVRRRGL-----VFALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAG 132

Query: 139 WSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTK 180
           W PIC     +C+R+ IS+A+S+ + + L ILT+++A+  +
Sbjct: 133 WLPICGYVHGYCSRVTISLAMSFASFILLFILTVLTASAAR 168

[Close]

BLAST of CmoCh10G000290 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 91.3 bits (225), Expect = 8.8e-19
Identity = 58/164 (35.37%), Postives = 89/164 (54.27%), Query Frame = 0


Query: 24  QIILRALVISSTLAAIWTLVTAKQSVVI----------FGFTLDARYSYSSAFKFFAIAN 83
           ++ +R L +  T+ A   L  AKQ+ V+             +  A+ SY SAF +   AN
Sbjct: 28  ELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISAN 87

Query: 84  AIACGFCLLSVCFVFISTRQLALGNRQRNFFF--FVHDLLMMGLVLSGCAAATAIGFVGR 143
           AIACG+  +S+  V IS      G R ++      + DL+M+ L+ S   AA AIG +GR
Sbjct: 88  AIACGYTAISIVIVMISK-----GKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGR 147

Query: 144 YGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISA 176
           +GN H  W  +C  FGKFCN+ A+S+AI+  A +  ++L ++ A
Sbjct: 148 HGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDA 186

[Close]

BLAST of CmoCh10G000290 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 86.3 bits (212), Expect = 2.8e-17
Identity = 57/164 (34.76%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 24  QIILRALVISSTLAAIWTLVTAKQSVVI----------FGFTLDARYSYSSAFKFFAIAN 83
           ++ +R L +  T+AA   L  AKQ+ V+             T  A+ SY SAF +    N
Sbjct: 28  ELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVN 87

Query: 84  AIACGFCLLSVCFVFISTRQLALGNRQRNFFFFV--HDLLMMGLVLSGCAAATAIGFVGR 143
           AIACG+  +S+  + IS      G R +     V   DL+M+ L+ SG  AA+AIG +G 
Sbjct: 88  AIACGYTAISIAILMISR-----GRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGL 147

Query: 144 YGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISA 176
           +GN H  W  +C  FGKFC+R A S+ ++  A +  + L ++ A
Sbjct: 148 HGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDA 186

[Close]

BLAST of CmoCh10G000290 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 75.5 bits (184), Expect = 5.0e-14
Identity = 53/182 (29.12%), Postives = 92/182 (50.55%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQI-----ILRALVISSTLAAIWTLVTAKQSVVIFG-- 60
           M     E+   S+G   +  +S +I     ILR +   +T+ +   + T  +++  F   
Sbjct: 1   MKSGQAEIMETSKGIQKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQF 60

Query: 61  FTLDARYSYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMM 120
               A Y+   A  FF +ANA+  G+ +LS+   F+   +    N +      + D+ M+
Sbjct: 61  IRFQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTR--ILLIILDVAML 120

Query: 121 GLVLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTII 176
           GL+ SG ++A AI ++   GN  T W  IC QF  FC RI+ S+  S+ A++ L++L ++
Sbjct: 121 GLLTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILL 180

[Close]

BLAST of CmoCh10G000290 vs. TAIR 10
Match: AT1G14160.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-14
Identity = 55/161 (34.16%), Postives = 81/161 (50.31%), Query Frame = 0


Query: 26  ILRALVISSTLAAIWTLVTAKQSVVIFG--FTLDARYSYSSAFKFFAIANAIACGFCLLS 85
           +LR   +  T+ +   + T  +SVV       L  +YS      FF +ANAI+ G+ +LS
Sbjct: 54  VLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAISGGYLVLS 113

Query: 86  V---CFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHTGWS 145
           +    F   ST+      +       V D +M+ LV SG +AATA  ++   GNT   W 
Sbjct: 114 LPVSIFHIFSTQA-----KTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTANWP 173

Query: 146 PICDQFGKFCNRIAISIAISYFAVLCLLILTIISANPTKLH 182
           PIC QF  FC RI+ S+  S+ AV+ L+++ I SA     H
Sbjct: 174 PICQQFDGFCERISGSLIGSFCAVILLMLIVINSAISLSRH 209

The following BLAST results are available for this feature:

BLAST of CmoCh10G000290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9RA90	5.5e-42	51.96	CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1	[more]
A7PHN8	4.7e-41	52.25	CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2	[more]
B9I3X5	8.2e-38	46.37	CASP-like protein 1F2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823430 PE=3 S...	[more]
B9IFI5	1.4e-37	45.81	CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 S...	[more]
B9RH17	1.6e-33	44.30	CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1	[more]

BLAST of CmoCh10G000290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E119	1.4e-93	100.00	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429832 PE=3 SV=1	[more]
A0A6J1JE80	1.2e-87	94.51	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484991 PE=3 SV=1	[more]
A0A6J1C084	2.6e-55	66.86	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006880 PE=3 SV=1	[more]
A0A5A7UPF9	4.0e-51	64.64	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]
A0A5D3BHA2	8.8e-51	65.00	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00...	[more]

BLAST of CmoCh10G000290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921629.1	3.0e-93	100.00	CASP-like protein 1F1 [Cucurbita moschata]	[more]
XP_022987446.1	2.4e-87	94.51	CASP-like protein 1F1 [Cucurbita maxima]	[more]
XP_023516133.1	1.3e-85	92.51	CASP-like protein 1F1 [Cucurbita pepo subsp. pepo]	[more]
KAG6589353.1	1.5e-60	85.35	CASP-like protein 1F1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022134667.1	5.5e-55	66.86	CASP-like protein 1F2 [Momordica charantia] >XP_022134668.1 CASP-like protein 1F...	[more]

BLAST of CmoCh10G000290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25040.1	1.4e-21	33.54	Uncharacterised protein family (UPF0497)	[more]
AT4G15630.1	8.8e-19	35.37	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	2.8e-17	34.76	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	5.0e-14	29.12	Uncharacterised protein family (UPF0497)	[more]
AT1G14160.1	8.5e-14	34.16	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 25..175 e-value: 7.4E-44 score: 147.2
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 23..166 e-value: 4.9E-38 score: 130.3
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 16..177
None	No IPR available	PANTHER	PTHR11615:SF264	CASP-LIKE PROTEIN 1F1	coord: 16..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G000290.1	CmoCh10G000290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003676	nucleic acid binding