CmoCh10G000230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G000230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Acyl carrier protein
Location	Cmo_Chr10: 135735 .. 136522 (-)
RNA-Seq Expression	CmoCh10G000230
Synteny	CmoCh10G000230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGCTTCCTTTTCATCTACTTGCCTCGGATTCCGCATACCTCTCAACCAAGCTGCCAAGACCAACCAGAACCAGGTATTCTCTGACATCCCACTCCACTACATATTTATTGCATTCTATGTACAGTTCCCTAAGTGAAATTGATATTATTGTATGCTGCTTCTGGCAGTGTCAGGTTCTCAGAAGAAGCTCCGCCGGGGCCGGTGGATTGCTCAAGAGTAATGGTTTCCGTCTTGTCACTCACAGAACCTCCCAATCCCACCTGCGTGTCTCTTGTGCGGTAAGTTCGGCATTTTCATTTGCTAATTAACTCACTTTGCTGTTACCTTTTGTTTGTTGTGTGAATTGAGTTTGAAAGTTAATTGGTAAATTTATGAAATGGAATGGACAGGCAAAACCAGAAACAGTTGATAAGGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAAGCTCAGAGCTCACCCCTGAATCCAAGTTCTCAGCTCTTGGTGCCGACTCCCTCGACACAGTACGCCTTTTCCATAACCTTCCCCAAACAAAACATCACACTAATCTTCTTCATACTTCTGTTTCCTTATTATATATAATTACGGTTCTGTTCATTGCCCCATTTGACAAAATCAAATATAATGTTGGCATGGCCACAGGTGGAGATTATTATGACCTTGGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACGACAGTTCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAGCAGCAATCTTAA

mRNA sequence

ATGGCAATGGCTTCCTTTTCATCTACTTGCCTCGGATTCCGCATACCTCTCAACCAAGCTGCCAAGACCAACCAGAACCAGTGTCAGGTTCTCAGAAGAAGCTCCGCCGGGGCCGGTGGATTGCTCAAGAGTAATGGTTTCCGTCTTGTCACTCACAGAACCTCCCAATCCCACCTGCGTGTCTCTTGTGCGGCAAAACCAGAAACAGTTGATAAGGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAAGCTCAGAGCTCACCCCTGAATCCAAGTTCTCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACCTTGGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACGACAGTTCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAGCAGCAATCTTAA

Coding sequence (CDS)

ATGGCAATGGCTTCCTTTTCATCTACTTGCCTCGGATTCCGCATACCTCTCAACCAAGCTGCCAAGACCAACCAGAACCAGTGTCAGGTTCTCAGAAGAAGCTCCGCCGGGGCCGGTGGATTGCTCAAGAGTAATGGTTTCCGTCTTGTCACTCACAGAACCTCCCAATCCCACCTGCGTGTCTCTTGTGCGGCAAAACCAGAAACAGTTGATAAGGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAAGCTCAGAGCTCACCCCTGAATCCAAGTTCTCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACCTTGGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACGACAGTTCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAGCAGCAATCTTAA

Protein sequence

MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS

Homology

[Close]

BLAST of CmoCh10G000230 vs. ExPASy Swiss-Prot
Match: Q9SW21 (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.6e-29
Identity = 79/143 (55.24%), Postives = 98/143 (68.53%), Query Frame = 0


Query: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62
           MAS S+T L F+ P    +       QVLR++S+      +S  F   T  T    L++S
Sbjct: 1   MASLSTTSLSFKAPSTTIS-------QVLRKASSS-----QSVTFGRFTSSTKSLRLQIS 60

Query: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122
           CAAK ETV KV  IV++QLAL     LT ESKFSALGADSLDTVEI+M LEE+F+I++EE
Sbjct: 61  CAAKAETVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEE 120

Query: 123 DNAQNITTVQEAADLIEDLVVKQ 146
            +AQNITT+QEAADLIEDLV K+
Sbjct: 121 SDAQNITTIQEAADLIEDLVQKK 131

[Close]

BLAST of CmoCh10G000230 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-26
Identity = 62/93 (66.67%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 53  RTSQSHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTL 112
           R   +   V CAAKPETV+KVC+IV+KQLALP+ S +T ESKF+ LGADSLDTVEI+M L
Sbjct: 42  RMRSARFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGL 101

Query: 113 EEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ 146
           EEEF IN+EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 102 EEEFGINVEEESAQSIATVQDAADLIEKLIEKK 134

[Close]

BLAST of CmoCh10G000230 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 59  LRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSI 118
           LRVSC AKPETV KVC IV+KQLALP+ SE+   SKFSALGADSLDTVEI+M LEEEF I
Sbjct: 52  LRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGI 111

Query: 119 NIEEDNAQNITTVQEAADLIEDLVVKQ 146
           ++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 112 SVEEESAQSIQTVQDAADLIEKLMEKK 138

[Close]

BLAST of CmoCh10G000230 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 62/93 (66.67%), Postives = 78/93 (83.87%), Query Frame = 0


Query: 53  RTSQSHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTL 112
           R     LRV+C AKPETV KVC+IV+KQLALP+ S+++  SKFSALGADSLDTVEI+M L
Sbjct: 43  RRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGL 102

Query: 113 EEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ 146
           EEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 103 EEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 135

[Close]

BLAST of CmoCh10G000230 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.2e-25
Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 57  SHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEF 116
           S  RVSC AKPETV KVC IV+KQLALP+ SE+   SKFSALGADSLDTVEI+M LEEEF
Sbjct: 49  SFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEF 108

Query: 117 SINIEEDNAQNITTVQEAADLIEDLVVKQ 146
            I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 109 GISVEEESAQSIQTVQDAADLIEKLMEKK 137

[Close]

BLAST of CmoCh10G000230 vs. ExPASy TrEMBL
Match: A0A6J1E6C1 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111429833 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.1e-71
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60
           MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR
Sbjct: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60

Query: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 148
           EEDNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of CmoCh10G000230 vs. ExPASy TrEMBL
Match: A0A6J1JI20 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111484784 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69
Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60
           MAMASFSSTCL FRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGF LVTHRTSQSHLR
Sbjct: 1   MAMASFSSTCLRFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLR 60

Query: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 148
           EEDNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of CmoCh10G000230 vs. ExPASy TrEMBL
Match: E5GBM2 (Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.1e-46
Identity = 114/145 (78.62%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62
           MASFS+T L F IP+NQA K N N  Q+LRRS  G G L  +N F          HLRVS
Sbjct: 1   MASFSATSLRFCIPINQANKMNHN--QLLRRSFPGQGLLSNNNAF----------HLRVS 60

Query: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122
           CAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 61  CAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120

Query: 123 DNAQNITTVQEAADLIEDLVVKQQS 148
           DNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 DNAQNITTVQEAADLIEDLVVKQQS 133

[Close]

BLAST of CmoCh10G000230 vs. ExPASy TrEMBL
Match: A0A1S3CLC5 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.1e-46
Identity = 114/145 (78.62%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62
           MASFS+T L F IP+NQA K N N  Q+LRRS  G G L  +N F          HLRVS
Sbjct: 1   MASFSATSLRFCIPINQANKMNHN--QLLRRSFPGQGLLSNNNAF----------HLRVS 60

Query: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122
           CAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 61  CAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120

Query: 123 DNAQNITTVQEAADLIEDLVVKQQS 148
           DNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 DNAQNITTVQEAADLIEDLVVKQQS 133

[Close]

BLAST of CmoCh10G000230 vs. ExPASy TrEMBL
Match: A0A0A0LNR6 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.8e-45
Identity = 110/145 (75.86%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62
           MASFS+T L F +P+NQA K N N  Q+LRRS  G G L  +N F          H RVS
Sbjct: 1   MASFSATSLRFCMPINQANKMNHN--QLLRRSLLGRGFLNNNNAF----------HFRVS 60

Query: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122
           CAAKPET+DKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 61  CAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120

Query: 123 DNAQNITTVQEAADLIEDLVVKQQS 148
           DNAQNITTVQEAADLIE+LVVKQQS
Sbjct: 121 DNAQNITTVQEAADLIENLVVKQQS 133

[Close]

BLAST of CmoCh10G000230 vs. NCBI nr
Match: XP_022921630.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60
           MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR
Sbjct: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60

Query: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 148
           EEDNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of CmoCh10G000230 vs. NCBI nr
Match: XP_022987144.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69
Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60
           MAMASFSSTCL FRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGF LVTHRTSQSHLR
Sbjct: 1   MAMASFSSTCLRFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLR 60

Query: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 148
           EEDNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of CmoCh10G000230 vs. NCBI nr
Match: XP_023516582.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68
Identity = 144/147 (97.96%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60
           MAMASFSSTCL FRIPLNQAAKT+QNQCQVLRRSSAGAGGLLKSNGF LVTHRTSQSHLR
Sbjct: 1   MAMASFSSTCLRFRIPLNQAAKTDQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLR 60

Query: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 148
           EEDNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of CmoCh10G000230 vs. NCBI nr
Match: KAG6589346.1 (Acyl carrier protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023033.1 Acyl carrier protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.2 bits (666), Expect = 5.6e-66
Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60
           MAMASFSSTCL FRIPLNQAAKTNQN  QVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR
Sbjct: 1   MAMASFSSTCLRFRIPLNQAAKTNQN--QVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60

Query: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 121 EEDNAQNITTVQEAADLIEDLVVKQQ 147
           EEDNAQNITTVQEAADLIEDLVVKQQ
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQ 144

[Close]

BLAST of CmoCh10G000230 vs. NCBI nr
Match: XP_008464386.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl carrier protein [Cucumis melo subsp. melo])

HSP 1 Score: 196.1 bits (497), Expect = 2.2e-46
Identity = 114/145 (78.62%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62
           MASFS+T L F IP+NQA K N N  Q+LRRS  G G L  +N F          HLRVS
Sbjct: 1   MASFSATSLRFCIPINQANKMNHN--QLLRRSFPGQGLLSNNNAF----------HLRVS 60

Query: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122
           CAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 61  CAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120

Query: 123 DNAQNITTVQEAADLIEDLVVKQQS 148
           DNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 DNAQNITTVQEAADLIEDLVVKQQS 133

[Close]

BLAST of CmoCh10G000230 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 127.9 bits (320), Expect = 6.8e-30
Identity = 79/143 (55.24%), Postives = 98/143 (68.53%), Query Frame = 0


Query: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62
           MAS S+T L F+ P    +       QVLR++S+      +S  F   T  T    L++S
Sbjct: 1   MASLSTTSLSFKAPSTTIS-------QVLRKASSS-----QSVTFGRFTSSTKSLRLQIS 60

Query: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122
           CAAK ETV KV  IV++QLAL     LT ESKFSALGADSLDTVEI+M LEE+F+I++EE
Sbjct: 61  CAAKAETVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEE 120

Query: 123 DNAQNITTVQEAADLIEDLVVKQ 146
            +AQNITT+QEAADLIEDLV K+
Sbjct: 121 SDAQNITTIQEAADLIEDLVQKK 131

[Close]

BLAST of CmoCh10G000230 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 )

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-27
Identity = 79/155 (50.97%), Postives = 98/155 (63.23%), Query Frame = 0


Query: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62
           MAS S+T L F+ P    +       QVLR++S+      +S  F   T  T    L++S
Sbjct: 1   MASLSTTSLSFKAPSTTIS-------QVLRKASSS-----QSVTFGRFTSSTKSLRLQIS 60

Query: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDT------------VEIIM 122
           CAAK ETV KV  IV++QLAL     LT ESKFSALGADSLDT            VEI+M
Sbjct: 61  CAAKAETVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVM 120

Query: 123 TLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ 146
            LEE+F+I++EE +AQNITT+QEAADLIEDLV K+
Sbjct: 121 ALEEKFNISVEESDAQNITTIQEAADLIEDLVQKK 143

[Close]

BLAST of CmoCh10G000230 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 )

HSP 1 Score: 111.7 bits (278), Expect = 5.1e-25
Identity = 58/93 (62.37%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 53  RTSQSHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTL 112
           R   + L VSCAAKPETVDKVC++VRKQL+L E+ E+T  +KF+ALGADSLDTVEI+M L
Sbjct: 42  RQLPTRLTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGL 101

Query: 113 EEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ 146
           EEEF I + E+ AQ+I TV++AA LIE+L+ ++
Sbjct: 102 EEEFGIEMAEEKAQSIATVEQAAALIEELLFEK 134

[Close]

BLAST of CmoCh10G000230 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 )

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24
Identity = 57/93 (61.29%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 53  RTSQSHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTL 112
           R   + L V CAAKPETVDKVC++VRKQL+L E+ E+T  +KF+ALGADSLDTVEI+M L
Sbjct: 42  RQLPTRLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGL 101

Query: 113 EEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ 146
           EEEF I + E+ AQ+I TV++AA LIE+L++++
Sbjct: 102 EEEFGIEMAEEKAQSIATVEQAAALIEELLLEK 134

[Close]

BLAST of CmoCh10G000230 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 43  KSNGFRLVTHRTSQSHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADS 102
           K+N       R   + L VSCA K ETV+KV  IV+KQL+L +  ++T  +KF+ LGADS
Sbjct: 35  KTNNLSFSLRRLMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADS 94

Query: 103 LDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLV 143
           LDTVEI+M LEEEF I + E+ A+ I TVQ+AA+LIE+LV
Sbjct: 95  LDTVEIVMGLEEEFGITMAEERAKEIATVQQAAELIEELV 134

The following BLAST results are available for this feature:

BLAST of CmoCh10G000230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW21	9.6e-29	55.24	Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE...	[more]
P93092	2.6e-26	66.67	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
P52411	1.0e-25	72.41	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
P52412	1.3e-25	66.67	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]
P52414	2.2e-25	70.79	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]

BLAST of CmoCh10G000230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6C1	8.1e-71	100.00	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111429833 PE=3 SV=1	[more]
A0A6J1JI20	2.6e-69	98.64	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111484784 PE=3 SV=1	[more]
E5GBM2	1.1e-46	78.62	Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3CLC5	1.1e-46	78.62	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1	[more]
A0A0A0LNR6	5.8e-45	75.86	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1	[more]

BLAST of CmoCh10G000230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921630.1	1.7e-70	100.00	acyl carrier protein 4, chloroplastic-like [Cucurbita moschata]	[more]
XP_022987144.1	5.4e-69	98.64	acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]	[more]
XP_023516582.1	2.0e-68	97.96	acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG6589346.1	5.6e-66	97.95	Acyl carrier protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_008464386.1	2.2e-46	78.62	PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl...	[more]

BLAST of CmoCh10G000230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25050.1	6.8e-30	55.24	acyl carrier protein 4	[more]
AT4G25050.2	3.2e-27	50.97	acyl carrier protein 4	[more]
AT1G54580.1	5.1e-25	62.37	acyl carrier protein 2	[more]
AT1G54630.1	1.5e-24	61.29	acyl carrier protein 3	[more]
AT5G27200.1	2.0e-21	54.00	acyl carrier protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020806	Polyketide synthase, phosphopantetheine-binding domain	SMART	SM00823	PKS_PP	coord: 70..142 e-value: 0.0092 score: 17.3
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 65..145 e-value: 2.8E-25 score: 90.2
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 67..142
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 68..140 e-value: 2.6E-22 score: 76.4
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 68..142 score: 17.127573
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 71..138 e-value: 3.1E-12 score: 46.6
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 67..142 score: 21.32522
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 23..145
None	No IPR available	PANTHER	PTHR46153:SF20	ACYL CARRIER PROTEIN 2, CHLOROPLASTIC-RELATED	coord: 23..145
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 97..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G000230.1	CmoCh10G000230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0031177	phosphopantetheine binding