CmoCh09G013170 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G013170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ankyrin repeat-containing protein BDA1-like
Location	Cmo_Chr09: 11891711 .. 11892746 (-)
RNA-Seq Expression	CmoCh09G013170
Synteny	CmoCh09G013170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGCTCTAGGTTGATTTTGGATATTATCTTCCATTTGAGCCAATCCAATCCAAATAAACCTCTTCAACTCCTAGATATGACCAAGACACAATTTGACCAAAGTGGATAATATATGCTAGCATTGATTTGTATGCTCTTCAATTAAGTTTAAAATCTTTCTCCTATCAAAGCTAGGTTTTAATCTTAGGACCTATGGGTTATAGGCCTACCATGCTTCCACTGCGCCACTCTGATTTGTTAGAAAAAAGATTAGCTATTGTGATCTGTTCTCGAGGTTTATTTATAGATATTATCTTCCTATTGAGCTTGTTTGCTTGTATTGTGCATGATACAGTATGTGTTAGCTGCAGGTGTTTGACAATGTGTTCTCCCTATCTAGCGTGTTTATCTACACAAAGCTAGAGTATAAGAGTTAAGTTCGTTATACGATGACTTAGGTCAAGATGCTTACACTAGACTAAGCACCTTAGGATCGTTGCGACATTAAGAGGGTCTTGACCTTATGACTCCAAAACTAAAGAAAGAATCGAGGAGTCAGAATAGAGTAACTTGGAGCCAACAACTCGTGTTAACCAACTTAAATTAGCCATTTCCTCTATTGAAGAAAGTAAAAGAAAGCTCTATGAAGCATCAAAGATTGGGTCCATTCCAAGCTTGAAGACACTAATTCGAGGCGACCCAAATATCATTCAAAGAGTTCTAATCTCTTCATCCAACGTTGAGAGTCCATTGCATGCCTCAGTTTTGCATCACCACCTTGAATTCACTCGATTTCTTTTGAATCTTGTGCCTGAACTTGCAGGGGAAGTTGATGACCTGCAAAGGACACCTCTCCACTTAGCTTCTGAAAATGGAACGGTCGAGATTGTTCAAGCTTTGCTGGAGAAGAACACAAGCACTTGCATGGTTCGTGATTTGAATGGGTTTATTCCTCTCCACCATGCAATGATTAATGGACGAATTGATATCATGCAACGGTTGATCATTGCGAGGCCAAGATCTCCTTGGGTTAAGCTTCACAATGGTCAAAGT

mRNA sequence

ATGCTAGCTCTAGGCGACCCAAATATCATTCAAAGAGTTCTAATCTCTTCATCCAACGTTGAGAGTCCATTGCATGCCTCAGTTTTGCATCACCACCTTGAATTCACTCGATTTCTTTTGAATCTTGTGCCTGAACTTGCAGGGGAAGTTGATGACCTGCAAAGGACACCTCTCCACTTAGCTTCTGAAAATGGAACGGTCGAGATTGTTCAAGCTTTGCTGGAGAAGAACACAAGCACTTGCATGGTTCGTGATTTGAATGGGTTTATTCCTCTCCACCATGCAATGATTAATGGACGAATTGATATCATGCAACGGTTGATCATTGCGAGGCCAAGATCTCCTTGGGTTAAGCTTCACAATGGTCAAAGT

Coding sequence (CDS)

ATGCTAGCTCTAGGCGACCCAAATATCATTCAAAGAGTTCTAATCTCTTCATCCAACGTTGAGAGTCCATTGCATGCCTCAGTTTTGCATCACCACCTTGAATTCACTCGATTTCTTTTGAATCTTGTGCCTGAACTTGCAGGGGAAGTTGATGACCTGCAAAGGACACCTCTCCACTTAGCTTCTGAAAATGGAACGGTCGAGATTGTTCAAGCTTTGCTGGAGAAGAACACAAGCACTTGCATGGTTCGTGATTTGAATGGGTTTATTCCTCTCCACCATGCAATGATTAATGGACGAATTGATATCATGCAACGGTTGATCATTGCGAGGCCAAGATCTCCTTGGGTTAAGCTTCACAATGGTCAAAGT

Protein sequence

MLALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRSPWVKLHNGQS

Homology

[Close]

BLAST of CmoCh09G013170 vs. ExPASy Swiss-Prot
Match: Q8GYH5 (Ankyrin repeat-containing protein BDA1 OS=Arabidopsis thaliana OX=3702 GN=BAD1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.9e-08
Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 7   PNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGT 66
           P+I+Q+V +    + +PLH +     L+    L+ L P  A ++++   +PLHLA EN  
Sbjct: 25  PDILQKVDVLPI-IHTPLHEASSAGKLDLAMELMILKPSFAKKLNEYGLSPLHLAVENDQ 84

Query: 67  VEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRS 115
           VE+   L++ + S   +R   G  PLH     G +D++   ++A P S
Sbjct: 85  VELALELVKVDPSLVRIRGRGGMTPLHLVAKKGDVDLLTDFLLACPES 131

[Close]

BLAST of CmoCh09G013170 vs. ExPASy Swiss-Prot
Match: Q04861 (Nuclear factor NF-kappa-B p105 subunit OS=Gallus gallus OX=9031 GN=NFKB1 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 6.7e-07
Identity = 37/121 (30.58%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 10  IQRVL--ISSSNVESPLHASVLHHHLEFTRFLLNLVPE-----LAGEVDDLQRTPLHLAS 69
           +QR L  +   N ++ LH S++H H E  + LL ++P+     +    +DL +TPLHLA 
Sbjct: 529 VQRHLTAVQDDNGDNVLHLSIIHLHRELVKNLLEVMPDMNYNNIINMRNDLYQTPLHLAV 588

Query: 70  ENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRSPWVKLHNG 124
                E+V+ LL+   +  ++ D +G   LH A   G   I+  L+  +  S  + L NG
Sbjct: 589 ITKQAEVVEDLLKAGANVNLL-DRHGNSVLHLAAAEGDDKILSLLLKHQKASSMIDLSNG 648

[Close]

BLAST of CmoCh09G013170 vs. ExPASy Swiss-Prot
Match: Q9ZU96 (Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana OX=3702 GN=At2g01680 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.7e-07
Identity = 30/96 (31.25%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 15  ISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALL 74
           I  ++  SPL+A+ +  HLE    +L++ P  A  V    +T LH A   G + IV+AL+
Sbjct: 123 ICDASNTSPLYAAAVQDHLEIVNAMLDVDPSCAMIVRKNGKTSLHTAGRYGLLRIVKALI 182

Query: 75  EKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIA 111
           EK+ +   V+D  G   LH A+    +++++ ++ A
Sbjct: 183 EKDAAIVGVKDKKGQTALHMAVKGRSLEVVEEILQA 218

[Close]

BLAST of CmoCh09G013170 vs. ExPASy Swiss-Prot
Match: Q8WXD9 (Caskin-1 OS=Homo sapiens OX=9606 GN=CASKIN1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 39/105 (37.14%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 13  VLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQA 72
           V I S     PLH +  H H + +  LL         VD+  +TPL LA E G V +VQ 
Sbjct: 108 VNIPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPC-MVDNSGKTPLDLACEFGRVGVVQL 167

Query: 73  LLEKNTSTCMVR-------DLNGFIPLHHAMINGRIDIMQRLIIA 111
           LL  N    ++        D NG  PLH A  NG IDI++ L+ A
Sbjct: 168 LLSSNMCAALLEPRPGDATDPNGTSPLHLAAKNGHIDIIRLLLQA 211

[Close]

BLAST of CmoCh09G013170 vs. ExPASy Swiss-Prot
Match: Q6P9K8 (Caskin-1 OS=Mus musculus OX=10090 GN=Caskin1 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 38/105 (36.19%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 13  VLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQA 72
           V + S     PLH +  H H + +  LL         VD+  +TPL LA E G V +VQ 
Sbjct: 108 VNVPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPC-MVDNSGKTPLDLACEFGRVGVVQL 167

Query: 73  LLEKNTSTCMVR-------DLNGFIPLHHAMINGRIDIMQRLIIA 111
           LL  N    ++        D NG  PLH A  NG IDI++ L+ A
Sbjct: 168 LLSSNMCAALLEPRPGDTTDPNGTSPLHLAAKNGHIDIIRLLLQA 211

[Close]

BLAST of CmoCh09G013170 vs. ExPASy TrEMBL
Match: A0A6J1IG24 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111472565 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.2e-60
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 2   LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLA 61
           L  GDPNIIQRVLISSSNVESPLH SVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLA
Sbjct: 39  LIRGDPNIIQRVLISSSNVESPLHVSVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLA 98

Query: 62  SENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRSPWVKLHN 121
           SENGTVEIVQALLEKNTSTCMVRDLNG IPLHHA+INGRIDIMQRLIIARPRSPWVKLHN
Sbjct: 99  SENGTVEIVQALLEKNTSTCMVRDLNGLIPLHHAVINGRIDIMQRLIIARPRSPWVKLHN 158

Query: 122 GQS 125
           GQ+
Sbjct: 159 GQT 161

[Close]

BLAST of CmoCh09G013170 vs. ExPASy TrEMBL
Match: A0A6J1EC63 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita moschata OX=3662 GN=LOC111432738 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.3e-57
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 2   LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLA 61
           L  GDPNIIQRVLISSSNVESPLH SVLHHHLEFT+FLLNLVPELAGEVDDLQRTPLHLA
Sbjct: 39  LIRGDPNIIQRVLISSSNVESPLHVSVLHHHLEFTQFLLNLVPELAGEVDDLQRTPLHLA 98

Query: 62  SENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRSPWVKLHN 121
           SENGTVEIVQALLEKNTSTCMVRDLNG IPLHHA+INGRIDI+QRLIIARPRSPWVKL+N
Sbjct: 99  SENGTVEIVQALLEKNTSTCMVRDLNGLIPLHHAVINGRIDIIQRLIIARPRSPWVKLYN 158

Query: 122 GQS 125
            Q+
Sbjct: 159 CQT 161

[Close]

BLAST of CmoCh09G013170 vs. ExPASy TrEMBL
Match: A0A6J1EC78 (uncharacterized protein LOC111432735 OS=Cucurbita moschata OX=3662 GN=LOC111432735 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 109/123 (88.62%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 2   LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLA 61
           L  GDPNII+RVLISSSNVESPL+ SVLH HLEFT FLLNLVP+LAG+VDDLQRTPLHLA
Sbjct: 78  LIRGDPNIIERVLISSSNVESPLYVSVLHCHLEFTLFLLNLVPKLAGKVDDLQRTPLHLA 137

Query: 62  SENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRSPWVKLHN 121
           S NGT+EIVQALLEKNTSTCMVRDLNG IPLHHA+INGRIDI+QRLIIARPRSPWVKLHN
Sbjct: 138 SGNGTIEIVQALLEKNTSTCMVRDLNGLIPLHHAVINGRIDIIQRLIIARPRSPWVKLHN 197

Query: 122 GQS 125
           GQS
Sbjct: 198 GQS 200

[Close]

BLAST of CmoCh09G013170 vs. ExPASy TrEMBL
Match: A0A6J1D887 (ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LOC111018270 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 95/120 (79.17%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 6   DPNIIQRVLI-SSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASEN 65
           DP+IIQ+VLI SSSN ESPLH SVLH  LEFTRFLL+L PELAGEVD LQRTPLHLAS N
Sbjct: 55  DPHIIQKVLISSSSNTESPLHVSVLHGQLEFTRFLLDLKPELAGEVDALQRTPLHLASAN 114

Query: 66  GTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRSPWVKLHNGQS 125
           G VEIVQALLEKNTS C+VRDLNG IPLHHA+I+G+I+IMQ LI ARP+S W KLHNGQ+
Sbjct: 115 GEVEIVQALLEKNTSACLVRDLNGLIPLHHAVISGQIEIMQELIHARPQSVWTKLHNGQT 174

[Close]

BLAST of CmoCh09G013170 vs. ExPASy TrEMBL
Match: A0A6J1EBP6 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita moschata OX=3662 GN=LOC111432737 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 93/123 (75.61%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 2   LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLA 61
           L   + NIIQRVLISS N+E+PL+ SVLH HLEFT+FLLNL+PELAGEV  LQRTPLHLA
Sbjct: 50  LIQNNSNIIQRVLISSYNIETPLYVSVLHCHLEFTQFLLNLMPELAGEVGALQRTPLHLA 109

Query: 62  SENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRSPWVKLHN 121
           SENGTVE+VQALLEKNTST +VRDLNG IPLHHA++NGRIDIMQRLI  RP+S W+K HN
Sbjct: 110 SENGTVEVVQALLEKNTSTYIVRDLNGLIPLHHAVVNGRIDIMQRLINVRPQSLWMKHHN 169

Query: 122 GQS 125
            ++
Sbjct: 170 DET 172

[Close]

BLAST of CmoCh09G013170 vs. TAIR 10
Match: AT4G10720.1 (Ankyrin repeat family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 29/93 (31.18%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 20  VESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTS 79
           + +PLH +    +L F   L+NL P  A +++    +PLHLA E G   +V +LL+ ++ 
Sbjct: 37  INTPLHIASASGNLSFAMELMNLKPSFARKLNTYGLSPLHLAIEEGQTRLVLSLLKVDSD 96

Query: 80  TCMVRDLNGFIPLHHAMINGRIDIMQRLIIARP 113
              +R   G  P H  +  G  D+M   ++A P
Sbjct: 97  LVRLRGREGMTPFHQVVRRGETDLMTEFLLACP 129

[Close]

BLAST of CmoCh09G013170 vs. TAIR 10
Match: AT4G10720.2 (Ankyrin repeat family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 29/93 (31.18%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 20  VESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTS 79
           + +PLH +    +L F   L+NL P  A +++    +PLHLA E G   +V +LL+ ++ 
Sbjct: 37  INTPLHIASASGNLSFAMELMNLKPSFARKLNTYGLSPLHLAIEEGQTRLVLSLLKVDSD 96

Query: 80  TCMVRDLNGFIPLHHAMINGRIDIMQRLIIARP 113
              +R   G  P H  +  G  D+M   ++A P
Sbjct: 97  LVRLRGREGMTPFHQVVRRGETDLMTEFLLACP 129

[Close]

BLAST of CmoCh09G013170 vs. TAIR 10
Match: AT5G54610.1 (ankyrin )

HSP 1 Score: 58.2 bits (139), Expect = 5.6e-09
Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 7   PNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGT 66
           P+I+Q+V +    + +PLH +     L+    L+ L P  A ++++   +PLHLA EN  
Sbjct: 25  PDILQKVDVLPI-IHTPLHEASSAGKLDLAMELMILKPSFAKKLNEYGLSPLHLAVENDQ 84

Query: 67  VEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARPRS 115
           VE+   L++ + S   +R   G  PLH     G +D++   ++A P S
Sbjct: 85  VELALELVKVDPSLVRIRGRGGMTPLHLVAKKGDVDLLTDFLLACPES 131

[Close]

BLAST of CmoCh09G013170 vs. TAIR 10
Match: AT2G31820.1 (Ankyrin repeat family protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 30/99 (30.30%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 10  IQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEI 69
           ++   I++ N   P H +    HLE  + LL   P LA   D    T LH A+  G +++
Sbjct: 214 LETASIAARNGFDPFHVAAKQGHLEVLKILLETFPNLAMTTDLSCTTALHTAATQGHIDV 273

Query: 70  VQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLI 109
           V  LLE +++   +   NG   LH A   G +++++ LI
Sbjct: 274 VNLLLETDSNLAKIAKNNGKTALHSAARMGHVEVVKSLI 312

[Close]

BLAST of CmoCh09G013170 vs. TAIR 10
Match: AT2G01680.1 (Ankyrin repeat family protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.8e-08
Identity = 30/96 (31.25%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 15  ISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALL 74
           I  ++  SPL+A+ +  HLE    +L++ P  A  V    +T LH A   G + IV+AL+
Sbjct: 123 ICDASNTSPLYAAAVQDHLEIVNAMLDVDPSCAMIVRKNGKTSLHTAGRYGLLRIVKALI 182

Query: 75  EKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIA 111
           EK+ +   V+D  G   LH A+    +++++ ++ A
Sbjct: 183 EKDAAIVGVKDKKGQTALHMAVKGRSLEVVEEILQA 218

The following BLAST results are available for this feature:

BLAST of CmoCh09G013170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYH5	7.9e-08	30.56	Ankyrin repeat-containing protein BDA1 OS=Arabidopsis thaliana OX=3702 GN=BAD1 P...	[more]
Q04861	6.7e-07	30.58	Nuclear factor NF-kappa-B p105 subunit OS=Gallus gallus OX=9031 GN=NFKB1 PE=2 SV...	[more]
Q9ZU96	6.7e-07	31.25	Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q8WXD9	1.1e-06	37.14	Caskin-1 OS=Homo sapiens OX=9606 GN=CASKIN1 PE=1 SV=1	[more]
Q6P9K8	1.5e-06	36.19	Caskin-1 OS=Mus musculus OX=10090 GN=Caskin1 PE=1 SV=2	[more]

BLAST of CmoCh09G013170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG24	9.2e-60	95.12	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EC63	4.3e-57	91.87	ankyrin repeat-containing protein BDA1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1EC78	1.2e-54	88.62	uncharacterized protein LOC111432735 OS=Cucurbita moschata OX=3662 GN=LOC1114327...	[more]
A0A6J1D887	1.1e-44	79.17	ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1EBP6	1.1e-44	75.61	ankyrin repeat-containing protein BDA1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of CmoCh09G013170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10720.1	1.5e-09	31.18	Ankyrin repeat family protein	[more]
AT4G10720.2	1.5e-09	31.18	Ankyrin repeat family protein	[more]
AT5G54610.1	5.6e-09	30.56	ankyrin	[more]
AT2G31820.1	2.1e-08	30.30	Ankyrin repeat family protein	[more]
AT2G01680.1	4.8e-08	31.25	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 19..48 e-value: 250.0 score: 9.5 coord: 87..119 e-value: 1.3 score: 18.1 coord: 53..82 e-value: 0.02 score: 24.1
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 53..85 score: 10.04513
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 5..124 e-value: 1.8E-18 score: 68.7
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 18..108
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 6..78 e-value: 1.0E-10 score: 42.1
None	No IPR available	PANTHER	PTHR24128:SF56	ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE	coord: 9..123
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 9..123
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 53..79 score: 9.675228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G013170.1	CmoCh09G013170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding