Homology
BLAST of CmoCh09G011220 vs. ExPASy Swiss-Prot
Match:
P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 5.2e-69
Identity = 137/332 (41.27%), Postives = 209/332 (62.95%), Query Frame = 0
Query: 150 KTCESLLQSPS-ILQKKKDGS----LRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAK 209
+T S SP ++ KK+D S R+ IDYR LN+ITV +++P+P + + +L
Sbjct: 237 RTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCN 296
Query: 210 YFSKLDLRSGYYQVRITEGDMPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEY 269
YF+ +DL G++Q+ + + KT T++G +E+L +PFGL NAP TF MN +
Sbjct: 297 YFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPL 356
Query: 270 LDKLVVVYLDDVVVYSSTMEEHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIE 329
L+K +VYLDD++V+S++++EH L LVFEKL + L ++ +KC F +Q FLGHV+
Sbjct: 357 LNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLT 416
Query: 330 ACKVGMEEEKFKAIKEWKTPSSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKW 389
+ EK +AI+++ P+ E+++FLGL YYR+F+ F+ A+P+T+ LKK K
Sbjct: 417 PDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKI 476
Query: 390 RWTS-QCQEAFDNLKNAVMEGPVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESR 449
T+ + AF LK + E P+L + D TK F + TDASD ALG VL Q+GH ++Y SR
Sbjct: 477 DTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISR 536
Query: 450 KLNDVERRYAASEKEMLAVVNCLRSWRPYLLG 476
LN+ E Y+ EKE+LA+V +++R YLLG
Sbjct: 537 TLNEHEINYSTIEKELLAIVWATKTFRHYLLG 568
BLAST of CmoCh09G011220 vs. ExPASy Swiss-Prot
Match:
P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 253.1 bits (645), Expect = 9.2e-66
Identity = 147/416 (35.34%), Postives = 225/416 (54.09%), Query Frame = 0
Query: 161 ILQKKKDGS----LRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYY 220
++ KK D S R+ IDYR LN+IT+ ++YP+P + + +L +YF+ +DL G++
Sbjct: 248 VVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFH 307
Query: 221 QVRITEGDMPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDV 280
Q+ + E + KT T+ G +E+L +PFGL NAP TF MN + L+K +VYLDD+
Sbjct: 308 QIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDI 367
Query: 281 VVYSSTMEEHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFK 340
+++S+++ EH + ++LVF KL + L ++ +KC F ++ NFLGH++ + K K
Sbjct: 368 IIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVK 427
Query: 341 AIKEWKTPSSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTS-QCQEAFD 400
AI + P+ E+R+FLGL YYR+F+ ++ A+P+T LKK K + EAF+
Sbjct: 428 AIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFE 487
Query: 401 NLKNAVMEGPVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAAS 460
LK ++ P+L + D K F + TDAS+ ALG VL Q GH I++ SR LND E Y+A
Sbjct: 488 KLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAI 547
Query: 461 EKEMLAVVNCLRSWRPYLLGAK-------------------------------------- 520
EKE+LA+V +++R YLLG +
Sbjct: 548 EKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKID 607
Query: 521 --PGKANQAADALSRKSEHVTLCMLVHLQESKLSGTIQESIEE------HLVKDPV 526
GK N ADALSR + ++E+ S Q S EE HL + P+
Sbjct: 608 YIKGKENSVADALSR----------IKIEENHHSEATQHSAEEDNSNLIHLTEKPI 653
BLAST of CmoCh09G011220 vs. ExPASy Swiss-Prot
Match:
Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)
HSP 1 Score: 246.9 bits (629), Expect = 6.6e-64
Identity = 175/561 (31.19%), Postives = 270/561 (48.13%), Query Frame = 0
Query: 126 LVDFVIVKMDDFDVVLRMEFLLEHK---TCESLLQSPSILQKKKDGSLRLCIDYRALNKI 185
L + + + ++ ++ ++ LL++K +S SP +L KKDG+ RLC+DYR LNK
Sbjct: 599 LQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKA 658
Query: 186 TVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGDMPKTTCVTRYGTFEFLVV 245
T+ + +PLP I NL R+ A+ F+ LDL SGY+Q+ + D KT VT G +E+ V+
Sbjct: 659 TISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVM 718
Query: 246 PFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTMEEHEHHLRLVFEKLREHQL 305
PFGL NAP+TF M F + + V VYLDD++++S + EEH HL V E+L+ L
Sbjct: 719 PFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENL 778
Query: 306 YVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTPSSVTEVRSFLGLANYYRQ 365
VK++KC FA + FLG+ I K+ + K AI+++ TP +V + + FLG+ NYYR+
Sbjct: 779 IVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRR 838
Query: 366 FVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEGPVLGIVDVTKSFKVETDA 425
F+ SK A+P+ + +K +WT + +A D LK+A+ PVL + ++++ TDA
Sbjct: 839 FIPNCSKIAQPIQLFI--CDKSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDA 898
Query: 426 SDFALGGVLLQEGH------TIAYESRKLNDVERRYAASEKEMLAVVNCLRSWRPYLLGA 485
S +G VL + + + Y S+ L ++ Y A E E+L ++ L +R Y+L
Sbjct: 899 SKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFR-YMLHG 958
Query: 486 K-----------------------------------------PGKANQAADALSRKSEHV 545
K G N ADA+SR +
Sbjct: 959 KHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTI 1018
Query: 546 TLCMLVHLQESKLSGTIQESIEEHLVKDPVAQAI---MQLAREGKTLILGRRQFTLHQSK 605
T + S+ T ES + + DP+ A+ M+ + F +Q K
Sbjct: 1019 T------PETSRPIDT--ESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKK 1078
Query: 606 SSLRPPFGK---LEE----------TPTKRMPR-------HTM-GRPQRVANNLCPPKKG 613
L F K LE+ P K+ HT+ G V L
Sbjct: 1079 LELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPI 1138
BLAST of CmoCh09G011220 vs. ExPASy Swiss-Prot
Match:
P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)
HSP 1 Score: 244.2 bits (622), Expect = 4.3e-63
Identity = 123/344 (35.76%), Postives = 197/344 (57.27%), Query Frame = 0
Query: 135 DDFDVVLRMEFLLEHKTCESLLQSPSILQKKKDGSLRLCIDYRALNKITVRNKYPLPIIT 194
D+ + L+ + E K + P + KK+G+LR+ +DY+ LNK N YPLP+I
Sbjct: 430 DEINQGLKSGIIRESKAINA---CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIE 489
Query: 195 NLFDRLHGAKYFSKLDLRSGYYQVRITEGDMPKTTCVTRYGTFEFLVVPFGLTNAPTTFY 254
L ++ G+ F+KLDL+S Y+ +R+ +GD K G FE+LV+P+G++ AP F
Sbjct: 490 QLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQ 549
Query: 255 TLMNQVFHEYLDKLVVVYLDDVVVYSSTMEEHEHHLRLVFEKLREHQLYVKREKCAFAQQ 314
+N + E + VV Y+DD++++S + EH H++ V +KL+ L + + KC F Q
Sbjct: 550 YFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQS 609
Query: 315 RINFLGHVIEACKVGMEEEKFKAIKEWKTPSSVTEVRSFLGLANYYRQFVEGFSKRAEPL 374
++ F+G+ I +E + +WK P + E+R FLG NY R+F+ S+ PL
Sbjct: 610 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 669
Query: 375 TQLLKKGNKWRWTSQCQEAFDNLKNAVMEGPVLGIVDVTKSFKVETDASDFALGGVLLQE 434
LLKK +W+WT +A +N+K ++ PVL D +K +ETDASD A+G VL Q+
Sbjct: 670 NNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQK 729
Query: 435 G-----HTIAYESRKLNDVERRYAASEKEMLAVVNCLRSWRPYL 474
+ + Y S K++ + Y+ S+KEMLA++ L+ WR YL
Sbjct: 730 HDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
BLAST of CmoCh09G011220 vs. ExPASy Swiss-Prot
Match:
P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)
HSP 1 Score: 244.2 bits (622), Expect = 4.3e-63
Identity = 123/344 (35.76%), Postives = 197/344 (57.27%), Query Frame = 0
Query: 135 DDFDVVLRMEFLLEHKTCESLLQSPSILQKKKDGSLRLCIDYRALNKITVRNKYPLPIIT 194
D+ + L+ + E K + P + KK+G+LR+ +DY+ LNK N YPLP+I
Sbjct: 430 DEINQGLKSGIIRESKAINA---CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIE 489
Query: 195 NLFDRLHGAKYFSKLDLRSGYYQVRITEGDMPKTTCVTRYGTFEFLVVPFGLTNAPTTFY 254
L ++ G+ F+KLDL+S Y+ +R+ +GD K G FE+LV+P+G++ AP F
Sbjct: 490 QLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQ 549
Query: 255 TLMNQVFHEYLDKLVVVYLDDVVVYSSTMEEHEHHLRLVFEKLREHQLYVKREKCAFAQQ 314
+N + E + VV Y+DD++++S + EH H++ V +KL+ L + + KC F Q
Sbjct: 550 YFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQS 609
Query: 315 RINFLGHVIEACKVGMEEEKFKAIKEWKTPSSVTEVRSFLGLANYYRQFVEGFSKRAEPL 374
++ F+G+ I +E + +WK P + E+R FLG NY R+F+ S+ PL
Sbjct: 610 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 669
Query: 375 TQLLKKGNKWRWTSQCQEAFDNLKNAVMEGPVLGIVDVTKSFKVETDASDFALGGVLLQE 434
LLKK +W+WT +A +N+K ++ PVL D +K +ETDASD A+G VL Q+
Sbjct: 670 NNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQK 729
Query: 435 G-----HTIAYESRKLNDVERRYAASEKEMLAVVNCLRSWRPYL 474
+ + Y S K++ + Y+ S+KEMLA++ L+ WR YL
Sbjct: 730 HDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
BLAST of CmoCh09G011220 vs. ExPASy TrEMBL
Match:
A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)
HSP 1 Score: 699.9 bits (1805), Expect = 1.0e-197
Identity = 435/1062 (40.96%), Postives = 519/1062 (48.87%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RGP NQN S PLS F CKG H ECP + + A
Sbjct: 325 GGDRRFNG--DRRSHQSNTGNSWRGPSNQN-VSNRPLSCFICKGPHMARECPNKTAFNAF 384
Query: 63 QAALDADADAKSE--GEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK-------- 122
QA+L +D+D + E ++ ++ P MGALK LS+LQKK E P+E+
Sbjct: 385 QASLASDSDNQQNQTEREADQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDTW 444
Query: 123 ----------------------------------------------------ARKTALKL 182
++T ++L
Sbjct: 445 INEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRL 504
Query: 183 GTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------- 242
G WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 505 GGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGL 564
Query: 243 ------------------------------------------------------------ 302
Sbjct: 565 KMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPR 624
Query: 303 --------------------------------KTCESLLQ------------SPSILQKK 362
K + LL +P + QKK
Sbjct: 625 RMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKK 684
Query: 363 KDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGDM 422
KDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 685 KDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDE 744
Query: 423 PKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTMEE 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TMEE
Sbjct: 745 PKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEE 804
Query: 483 HEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTPS 542
H HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 805 HRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPK 864
Query: 543 SVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEGP 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEGP
Sbjct: 865 SVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGP 924
Query: 603 VLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVNC 662
+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+C
Sbjct: 925 LLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHC 984
Query: 663 LRSWRPYLLGA----------------------------------------KPGKANQAA 682
LR+WR YLLG+ K G +NQAA
Sbjct: 985 LRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQAA 1044
BLAST of CmoCh09G011220 vs. ExPASy TrEMBL
Match:
A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)
HSP 1 Score: 699.5 bits (1804), Expect = 1.4e-197
Identity = 436/1063 (41.02%), Postives = 522/1063 (49.11%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RG NQN S PLS F CKG H ECP + + A
Sbjct: 355 GGDRRFSG--DRRSHQSNTGNSWRGSSNQN-LSNRPLSCFICKGPHMARECPNKTAFNAF 414
Query: 63 QAALDADAD---AKSEGEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK------- 122
QA+L +D+D +++EG E+ + ++ P MGALK LS+LQKK E P+E+
Sbjct: 415 QASLTSDSDNQQSQTEG-EVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 474
Query: 123 -----------------------------------------------------ARKTALK 182
++T ++
Sbjct: 475 WINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIR 534
Query: 183 LGTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------ 242
LG WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 535 LGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG 594
Query: 243 ------------------------------------------------------------ 302
Sbjct: 595 LKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPP 654
Query: 303 ---------------------------------KTCESLLQ------------SPSILQK 362
K + LL +P + Q+
Sbjct: 655 RRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQR 714
Query: 363 KKDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGD 422
KKDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 715 KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGD 774
Query: 423 MPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTME 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TME
Sbjct: 775 EPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME 834
Query: 483 EHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTP 542
EH HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 835 EHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMP 894
Query: 543 SSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEG 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEG
Sbjct: 895 KSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQALMEG 954
Query: 603 PVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVN 662
P+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+
Sbjct: 955 PLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVH 1014
Query: 663 CLRSWRPYLLGA----------------------------------------KPGKANQA 682
CLR+WR YLLG+ K G +NQA
Sbjct: 1015 CLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQA 1074
BLAST of CmoCh09G011220 vs. ExPASy TrEMBL
Match:
A0A5A7SUK4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G00100 PE=4 SV=1)
HSP 1 Score: 699.5 bits (1804), Expect = 1.4e-197
Identity = 435/1063 (40.92%), Postives = 523/1063 (49.20%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RG +NQN S PLS F CKG H ECP + + A
Sbjct: 355 GGDRRFSG--DRRSYQSNTGNSWRGSNNQN-LSNRPLSCFICKGPHMARECPNKTAFNAF 414
Query: 63 QAALDADAD---AKSEGEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK------- 122
QA+L +D+D +++EG E+ + ++ P MGALK LS+LQKK E P+E+
Sbjct: 415 QASLTSDSDNQQSQTEG-EVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 474
Query: 123 -----------------------------------------------------ARKTALK 182
++T ++
Sbjct: 475 WINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIR 534
Query: 183 LGTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------ 242
LG WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 535 LGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG 594
Query: 243 ------------------------------------------------------------ 302
Sbjct: 595 LKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPP 654
Query: 303 ---------------------------------KTCESLLQ------------SPSILQK 362
K + LL +P + Q+
Sbjct: 655 RRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQR 714
Query: 363 KKDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGD 422
KKDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 715 KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGD 774
Query: 423 MPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTME 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TME
Sbjct: 775 EPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME 834
Query: 483 EHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTP 542
EH HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 835 EHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMP 894
Query: 543 SSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEG 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEG
Sbjct: 895 KSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQALMEG 954
Query: 603 PVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVN 662
P+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+
Sbjct: 955 PLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVH 1014
Query: 663 CLRSWRPYLLGA----------------------------------------KPGKANQA 682
CLR+WR YLLG+ K G +NQA
Sbjct: 1015 CLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQA 1074
BLAST of CmoCh09G011220 vs. ExPASy TrEMBL
Match:
A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)
HSP 1 Score: 699.1 bits (1803), Expect = 1.8e-197
Identity = 435/1063 (40.92%), Postives = 522/1063 (49.11%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RG NQN S PLS F CKG H ECP + + A
Sbjct: 355 GGDRRFSG--DRRSHQSNTGNSWRGSSNQN-LSNRPLSCFICKGPHMARECPNKTAFNAF 414
Query: 63 QAALDADAD---AKSEGEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK------- 122
QA+L +D+D +++EG E+ + ++ P MGALK LS+LQKK E P+E+
Sbjct: 415 QASLTSDSDNQQSQTEG-EVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 474
Query: 123 -----------------------------------------------------ARKTALK 182
++T ++
Sbjct: 475 WINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIR 534
Query: 183 LGTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------ 242
LG WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 535 LGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG 594
Query: 243 ------------------------------------------------------------ 302
Sbjct: 595 LKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPP 654
Query: 303 ---------------------------------KTCESLLQ------------SPSILQK 362
K + LL +P + Q+
Sbjct: 655 RRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQR 714
Query: 363 KKDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGD 422
KKDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 715 KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGD 774
Query: 423 MPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTME 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TME
Sbjct: 775 EPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME 834
Query: 483 EHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTP 542
EH HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 835 EHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMP 894
Query: 543 SSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEG 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEG
Sbjct: 895 KSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQALMEG 954
Query: 603 PVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVN 662
P+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+
Sbjct: 955 PLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVH 1014
Query: 663 CLRSWRPYLLGA----------------------------------------KPGKANQA 682
CLR+WR YLLG+ K G +NQA
Sbjct: 1015 CLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQA 1074
BLAST of CmoCh09G011220 vs. ExPASy TrEMBL
Match:
A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)
HSP 1 Score: 699.1 bits (1803), Expect = 1.8e-197
Identity = 435/1063 (40.92%), Postives = 522/1063 (49.11%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RG NQN S PLS F CKG H ECP + + A
Sbjct: 355 GGDRRFSG--DRRSHQSNTGNSWRGSSNQN-LSNRPLSCFICKGPHMARECPNKTAFNAF 414
Query: 63 QAALDADAD---AKSEGEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK------- 122
QA+L +D+D +++EG E+ + ++ P MGALK LS+LQKK E P+E+
Sbjct: 415 QASLTSDSDNQQSQTEG-EVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 474
Query: 123 -----------------------------------------------------ARKTALK 182
++T ++
Sbjct: 475 WINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIR 534
Query: 183 LGTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------ 242
LG WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 535 LGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG 594
Query: 243 ------------------------------------------------------------ 302
Sbjct: 595 LKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPP 654
Query: 303 ---------------------------------KTCESLLQ------------SPSILQK 362
K + LL +P + Q+
Sbjct: 655 RRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQR 714
Query: 363 KKDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGD 422
KKDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 715 KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGD 774
Query: 423 MPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTME 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TME
Sbjct: 775 EPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME 834
Query: 483 EHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTP 542
EH HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 835 EHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMP 894
Query: 543 SSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEG 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEG
Sbjct: 895 KSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQALMEG 954
Query: 603 PVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVN 662
P+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+
Sbjct: 955 PLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVH 1014
Query: 663 CLRSWRPYLLGA----------------------------------------KPGKANQA 682
CLR+WR YLLG+ K G +NQA
Sbjct: 1015 CLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQA 1074
BLAST of CmoCh09G011220 vs. NCBI nr
Match:
TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 699.9 bits (1805), Expect = 2.2e-197
Identity = 435/1062 (40.96%), Postives = 519/1062 (48.87%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RGP NQN S PLS F CKG H ECP + + A
Sbjct: 325 GGDRRFNG--DRRSHQSNTGNSWRGPSNQN-VSNRPLSCFICKGPHMARECPNKTAFNAF 384
Query: 63 QAALDADADAKSE--GEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK-------- 122
QA+L +D+D + E ++ ++ P MGALK LS+LQKK E P+E+
Sbjct: 385 QASLASDSDNQQNQTEREADQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDTW 444
Query: 123 ----------------------------------------------------ARKTALKL 182
++T ++L
Sbjct: 445 INEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRL 504
Query: 183 GTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------- 242
G WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 505 GGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGL 564
Query: 243 ------------------------------------------------------------ 302
Sbjct: 565 KMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPR 624
Query: 303 --------------------------------KTCESLLQ------------SPSILQKK 362
K + LL +P + QKK
Sbjct: 625 RMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKK 684
Query: 363 KDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGDM 422
KDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 685 KDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDE 744
Query: 423 PKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTMEE 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TMEE
Sbjct: 745 PKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEE 804
Query: 483 HEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTPS 542
H HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 805 HRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPK 864
Query: 543 SVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEGP 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEGP
Sbjct: 865 SVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGP 924
Query: 603 VLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVNC 662
+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+C
Sbjct: 925 LLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHC 984
Query: 663 LRSWRPYLLGA----------------------------------------KPGKANQAA 682
LR+WR YLLG+ K G +NQAA
Sbjct: 985 LRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQAA 1044
BLAST of CmoCh09G011220 vs. NCBI nr
Match:
KAA0032849.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 699.5 bits (1804), Expect = 2.8e-197
Identity = 435/1063 (40.92%), Postives = 523/1063 (49.20%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RG +NQN S PLS F CKG H ECP + + A
Sbjct: 355 GGDRRFSG--DRRSYQSNTGNSWRGSNNQN-LSNRPLSCFICKGPHMARECPNKTAFNAF 414
Query: 63 QAALDADAD---AKSEGEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK------- 122
QA+L +D+D +++EG E+ + ++ P MGALK LS+LQKK E P+E+
Sbjct: 415 QASLTSDSDNQQSQTEG-EVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 474
Query: 123 -----------------------------------------------------ARKTALK 182
++T ++
Sbjct: 475 WINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIR 534
Query: 183 LGTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------ 242
LG WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 535 LGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG 594
Query: 243 ------------------------------------------------------------ 302
Sbjct: 595 LKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPP 654
Query: 303 ---------------------------------KTCESLLQ------------SPSILQK 362
K + LL +P + Q+
Sbjct: 655 RRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQR 714
Query: 363 KKDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGD 422
KKDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 715 KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGD 774
Query: 423 MPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTME 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TME
Sbjct: 775 EPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME 834
Query: 483 EHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTP 542
EH HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 835 EHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMP 894
Query: 543 SSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEG 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEG
Sbjct: 895 KSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQALMEG 954
Query: 603 PVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVN 662
P+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+
Sbjct: 955 PLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVH 1014
Query: 663 CLRSWRPYLLGA----------------------------------------KPGKANQA 682
CLR+WR YLLG+ K G +NQA
Sbjct: 1015 CLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQA 1074
BLAST of CmoCh09G011220 vs. NCBI nr
Match:
KAA0036830.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 699.5 bits (1804), Expect = 2.8e-197
Identity = 436/1063 (41.02%), Postives = 522/1063 (49.11%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RG NQN S PLS F CKG H ECP + + A
Sbjct: 355 GGDRRFSG--DRRSHQSNTGNSWRGSSNQN-LSNRPLSCFICKGPHMARECPNKTAFNAF 414
Query: 63 QAALDADAD---AKSEGEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK------- 122
QA+L +D+D +++EG E+ + ++ P MGALK LS+LQKK E P+E+
Sbjct: 415 QASLTSDSDNQQSQTEG-EVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 474
Query: 123 -----------------------------------------------------ARKTALK 182
++T ++
Sbjct: 475 WINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIR 534
Query: 183 LGTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------ 242
LG WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 535 LGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG 594
Query: 243 ------------------------------------------------------------ 302
Sbjct: 595 LKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPP 654
Query: 303 ---------------------------------KTCESLLQ------------SPSILQK 362
K + LL +P + Q+
Sbjct: 655 RRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQR 714
Query: 363 KKDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGD 422
KKDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 715 KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGD 774
Query: 423 MPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTME 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TME
Sbjct: 775 EPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME 834
Query: 483 EHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTP 542
EH HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 835 EHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMP 894
Query: 543 SSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEG 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEG
Sbjct: 895 KSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQALMEG 954
Query: 603 PVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVN 662
P+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+
Sbjct: 955 PLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVH 1014
Query: 663 CLRSWRPYLLGA----------------------------------------KPGKANQA 682
CLR+WR YLLG+ K G +NQA
Sbjct: 1015 CLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQA 1074
BLAST of CmoCh09G011220 vs. NCBI nr
Match:
KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 699.1 bits (1803), Expect = 3.7e-197
Identity = 435/1063 (40.92%), Postives = 522/1063 (49.11%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RG NQN S PLS F CKG H ECP + + A
Sbjct: 351 GGDRRFSG--DRRSHQSNTGNSWRGSSNQN-LSNRPLSCFICKGPHMARECPNKTAFNAF 410
Query: 63 QAALDADAD---AKSEGEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK------- 122
QA+L +D+D +++EG E+ + ++ P MGALK LS+LQKK E P+E+
Sbjct: 411 QASLTSDSDNQQSQTEG-EVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470
Query: 123 -----------------------------------------------------ARKTALK 182
++T ++
Sbjct: 471 WINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIR 530
Query: 183 LGTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------ 242
LG WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 531 LGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG 590
Query: 243 ------------------------------------------------------------ 302
Sbjct: 591 LKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPP 650
Query: 303 ---------------------------------KTCESLLQ------------SPSILQK 362
K + LL +P + Q+
Sbjct: 651 RRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQR 710
Query: 363 KKDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGD 422
KKDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 711 KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGD 770
Query: 423 MPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTME 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TME
Sbjct: 771 EPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME 830
Query: 483 EHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTP 542
EH HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 831 EHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMP 890
Query: 543 SSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEG 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEG
Sbjct: 891 KSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQALMEG 950
Query: 603 PVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVN 662
P+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+
Sbjct: 951 PLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVH 1010
Query: 663 CLRSWRPYLLGA----------------------------------------KPGKANQA 682
CLR+WR YLLG+ K G +NQA
Sbjct: 1011 CLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQA 1070
BLAST of CmoCh09G011220 vs. NCBI nr
Match:
KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 699.1 bits (1803), Expect = 3.7e-197
Identity = 435/1063 (40.92%), Postives = 522/1063 (49.11%), Query Frame = 0
Query: 3 GGDKSKIGGVETRQPQRRTSVLGRGPHNQNHFSRPPLSSFQCKGNHRVYECPKRASLQAI 62
GGD+ G + R Q T RG NQN S PLS F CKG H ECP + + A
Sbjct: 355 GGDRRFSG--DRRSHQSNTGNSWRGSSNQN-LSNRPLSCFICKGPHMARECPNKTAFNAF 414
Query: 63 QAALDADAD---AKSEGEEIEKVLNIETPWMGALKILSALQKKTREQREPIEK------- 122
QA+L +D+D +++EG E+ + ++ P MGALK LS+LQKK E P+E+
Sbjct: 415 QASLTSDSDNQQSQTEG-EVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 474
Query: 123 -----------------------------------------------------ARKTALK 182
++T ++
Sbjct: 475 WINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIR 534
Query: 183 LGTWSSLVDFVIVKMDDFDVVLRMEFLLEH------------------------------ 242
LG WS LVDFV+VKMDDFDVVL MEFLLEH
Sbjct: 535 LGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG 594
Query: 243 ------------------------------------------------------------ 302
Sbjct: 595 LKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPP 654
Query: 303 ---------------------------------KTCESLLQ------------SPSILQK 362
K + LL +P + Q+
Sbjct: 655 RRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQR 714
Query: 363 KKDGSLRLCIDYRALNKITVRNKYPLPIITNLFDRLHGAKYFSKLDLRSGYYQVRITEGD 422
KKDGSLRLCIDYRALNK+TVRNKYPLPIIT+LFDRLHGAKYFSKLDLRSGYYQVRI EGD
Sbjct: 715 KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGD 774
Query: 423 MPKTTCVTRYGTFEFLVVPFGLTNAPTTFYTLMNQVFHEYLDKLVVVYLDDVVVYSSTME 482
PKTTCVTRYG FEFLV+PFGLTNAP TF TLMNQVFHEYLDK VVVYLDD+VVYS+TME
Sbjct: 775 EPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME 834
Query: 483 EHEHHLRLVFEKLREHQLYVKREKCAFAQQRINFLGHVIEACKVGMEEEKFKAIKEWKTP 542
EH HL+ VF+KL+E+QLYVKREKC+FAQ+RINFLGHVIE ++GMEE K AI++W P
Sbjct: 835 EHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMP 894
Query: 543 SSVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEG 602
SV+E+RSFLGLANYYR+FVEGFSKRA PLT+LLKK W W +CQ AFD LK A+MEG
Sbjct: 895 KSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQALMEG 954
Query: 603 PVLGIVDVTKSFKVETDASDFALGGVLLQEGHTIAYESRKLNDVERRYAASEKEMLAVVN 662
P+LGI DVTK F+VETDASD+ALGGVLLQ GH IAYESRKLN ERRY SEKEMLAVV+
Sbjct: 955 PLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVH 1014
Query: 663 CLRSWRPYLLGA----------------------------------------KPGKANQA 682
CLR+WR YLLG+ K G +NQA
Sbjct: 1015 CLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQA 1074
BLAST of CmoCh09G011220 vs. TAIR 10
Match:
ATMG00860.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 106.3 bits (264), Expect = 9.9e-23
Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = 0
Query: 288 HHLRLVFEKLREHQLYVKREKCAFAQQRINFLG--HVIEACKVGMEEEKFKAIKEWKTPS 347
+HL +V + +HQ Y R+KCAF Q +I +LG H+I V + K +A+ W P
Sbjct: 2 NHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPK 61
Query: 348 SVTEVRSFLGLANYYRQFVEGFSKRAEPLTQLLKKGNKWRWTSQCQEAFDNLKNAVMEGP 407
+ TE+R FLGL YYR+FV+ + K PLT+LLKK N +WT AF LK AV P
Sbjct: 62 NTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK-NSLKWTEMAALAFKALKGAVTTLP 121
Query: 408 VLGIVDVTKSF 417
VL + D+ F
Sbjct: 122 VLALPDLKLPF 131
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P04323 | 5.2e-69 | 41.27 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... | [more] |
| P20825 | 9.2e-66 | 35.34 | Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... | [more] |
| Q99315 | 6.6e-64 | 31.19 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
| P0CT41 | 4.3e-63 | 35.76 | Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
| P0CT34 | 4.3e-63 | 35.76 | Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C9P8 | 1.0e-197 | 40.96 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26... | [more] |
| A0A5A7T0E2 | 1.4e-197 | 41.02 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20... | [more] |
| A0A5A7SUK4 | 1.4e-197 | 40.92 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81... | [more] |
| A0A5D3C4R1 | 1.8e-197 | 40.92 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... | [more] |
| A0A5D3BRZ6 | 1.8e-197 | 40.92 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK07954.1 | 2.2e-197 | 40.96 | reverse transcriptase [Cucumis melo var. makuwa] | [more] |
| KAA0032849.1 | 2.8e-197 | 40.92 | reverse transcriptase [Cucumis melo var. makuwa] | [more] |
| KAA0036830.1 | 2.8e-197 | 41.02 | reverse transcriptase [Cucumis melo var. makuwa] | [more] |
| KAA0067557.1 | 3.7e-197 | 40.92 | reverse transcriptase [Cucumis melo var. makuwa] | [more] |
| KAA0037220.1 | 3.7e-197 | 40.92 | reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| ATMG00860.1 | 9.9e-23 | 42.75 | DNA/RNA polymerases superfamily protein | [more] |
