
CmoCh09G010560 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGGCGTTCAAAAAGTAATCTTTCATCGATCGTCGTCACTCTCTTTCAAACCTTTTCCGTTGAATCGAACGAACGAACGAGAATCTTTCACTGAATTGCAGCACCGACGACGAACTTTCCGATGCATCGCCGCCGGTGCGTGTCGTCCAGAGCCATTTCGGACGCAGAGAGTGAGTCCGATAACGAAATGATGAAGTGCTTGTCGTGTCTGGAGGATTACAGGTCACGCGACGCCGGAACCTGCAAGGAGTGCTACGAGGAAGCTAATGAGACTGAGGAAGAGCTCAAGCGTGAGATCGAAGACTTGAAAGCTAAAGTTGCTTTCCTCAGGTTTTGGTCCCCTCTCGATCATCTTCATAATCGGTCGAATGCTCCTTGCTTTACTGATGTTGTTTTGATCGCCTCCGGCGATGGCGCTGAGGGATATGCTGTGCCACTTCCCGCTCATAAAGCTGTCTTGGTTAGTACGAATTTTATAGTTTACTCGAATATTACACTATTTTGTGGTTTTGTTTTGATTCCTTGAGTATGATTTTGAGTTGTGTAGTATTAAACGATTACTTGTTTCTTAGGAACTAAGAGTAAGATATTTAACTTTCAAATGCATAATCATTTGAAGTTCTGGAACAAGGTTGCATAATATACTTTTATACATATTGAAGAGACTACACTTTTAACACTTGCTTGACTCTAGTTGATTTCTTCTGCTTGTTTATCCTACAATCTATTTGATTGTTCATGAGATTGTGGATTAGGTTAGATGTTGAAGAAATGGATACTTCTTTTGAAAGGGGTGGAATTAAAGGGAGTAGACCACTTGGCTGATTGGGCTACAACTTTTATGGCAATGAAGCTAGTGGCCAGTGGCTTTGGATGTGGAAATCTAAGGAGAAAGAACATGCTTGTCACGGGTAAATGCCTTTTGGGATTTTCTAGGAAGCCATTTTTAACATTCCTAGTAAGTAAGGGTTCGATTTTAATAGATTGAGCATTTCAGTGGTGGAGACAGCTTGCTATTGAAGTTCTCAGATCTTAAATCAATCCTTCGGTGACCTAAATGTGTGTAATGGTGGAAGAATCATGCCTTGGAAAGACACTTGATCGAGGGATCTTGTGGCTGGCTTTTCAAATCTGTTCAAGTGTTCTAGCATCTCATTTGACTATTGGATACAACCCATACGTTCAAATGCAATCTACTTCATGGAATCTGAAATTTTGAATAAATTTATTTCGAAGCTGAGGATGGACCTCTCTATTTGCTTTGAGGGAAATATTTACCATCTTGAACCCTGATTCTAAATTGTGATCCCTGTAGAGATCTAGAACATCTCTTGCAAACCTTTCCGACAGCAATATTGAGGGATAGCAAAGGTGCCCAGCTTCCTTCAAGTTAATGATCTAATAGGTCTAAGAAAATCCAGTTTTCTATCCTTATTGAAAATCAATACTTGTGGGTGATCTGAGAGGCATCCAATTCAGTATTTCTAGTCAAGGAACTTGAAGGGAAACTGAAGAGTTGGCCATAATCAAATAGCTAAATATCCTTGATGGCTGAACGGGGAACAAAAGATCTTGGAGGAGCCTACAATCAAAGAAACGAGAATATGGTTGAGAAATAGGTGATGGCAGATAAGCGATGATGCATAGATGGTGCTATTTTTTTTTTTTTTTTCTCTCTTACTCGGGCATGGCTAGTGTTATGAATTTTAGGAAATCACTTTGATGTATTTGGTAAAAAAAAAGTAAACACGAGGATTTAAATGGGGTCGAATCTGTGTGTTCATAAGAGGGAGATTGACTTTGGTTCAACCAGTTTGGAGCATCTTCTGTGAGTTTAGCTTGCAGGCTCAATTTGGGACGATTTGTAAGGCTTTTGGTGTACTTGGCTCGGATCAATGTCTTTGTTTGGCTTTTTGTAACCAAATTTTTACAACTATCCTTTATCCCTTATTCTAAATAATTGCAGTCCTTTCTTTGTCACCCTCTGCTCTGGTTAGCAATGTTTGTTTGTAGCCCTTTCTTGGGTCCTGGCTTGGGTGTTCTTAACCATGTCAAAGCAAAATTGCTTCAATAAGAAATTAGTTGTCGAGATCGGCTCCTTTTTTTTTTTTTTTTTTTAAATTATAATTTGAGTTTCTTTGGCATTTGATCACTGAAAGCTAATATGCGTTAAGTGACAATAGGTGTGATCCCAGTCTTGCTTCGAGGGAATCTCATGTGAATCTTTGAAAAATTTTCTTTTGCGGTTTGATTTAGTTTCTACTTATCTCATCTGGTGTATTGGCCAAATAAAGAAAATAGGTTGTTTGGTGATCTGTGAATTCTGTTATTGTTCAAATTTTTTGATGTCTTTACTGTTTCTTTTAGCCTAATAAGGTTGACCATTAGGTGATAGCAATACACTCCTCTCTTAATTTAACTCATCTTTTATCAACTTCAAGTGTCAAGTTTTTTTGGGTAGTTTGGTTGATCAAAGAAATATCCAGGGTAATTTCTCCAGCAAATCTCATTAGCTGTTTGCTTTTCTTTATAGGGGATTTAGACATTGCTCCCTCGGTCCCAACATATGATTATTTCGTGTTGTTATTGACATGGAGTATTTATTTTCCTCTATAGAGGTTTTGGCAAAAAGTCCCTAAAGATGTTGCTATTTTTTCTCCCTTTTTCTAGGATTGATGTCTGCTGTGTAGTTTGTAATTGTAATTGTTTCTTATTTAGGATAACCATTTGGCTTTTAAAAATGTGCTCGTTTTCTTACAATTGCTTTACAATCCTTTGTATTTTTCTTTAGAAAACATTTGAATTTATAACCAATTTTCAAATACAAAAACAAAATTTTAAAAACTACTTCTTATAGTTTTCAATATTTGTCTTCGATTTTGAAAATACTCTTAGAAAGGGGATAACAAACAAACAACGAAATCCATTAGTGGAGATAGTGTTTATAGGCTTAATTTTAAAAATTCAAAATCTAATAAATAAGGCTCCGTTTGATAACAGTTTAGTTTTTAGTTTTTGATTTTTGAAATTTATGTTTGTTTTCTCCAAAATTTTCAATTATGGTTTTCACCTTTACTTGAGTTCCTACTCAAATTCTAAAAACAAAAACAAGTTTCTGGTAACTATTTTATTTTGTTTTCAAAACTTGAATGAGTTCTTTTAAAATAATAGCGAAAAGTGGATAATAAAACGTAGAAACTTATGGGTGGAAGTAGTGTTCCTAAACTTAATTTCTTAAAATAAAAAACCAAATGATTATCAAGCGGGGTCTTATTTTTTTTTTTTTAGAGAACATAGATCGTATGAGTTTATAACTGATGCTTAGCAAAAAATGTACTTTCCATGTTACCTGAAGACTATGTTTGTTTTCCAAGAACCAAAAGCCTTAAAACAATTCAACAAAGAGATACTTGATACAGAATATAATTTTTGAAATTGCATTGAATTATGAATATTTTGTCATCGTGGGCACGTTCAACTCAGCTGCTACTTGTGATATTTTCTAAAGTTCTGTATGTTTTTTTGGGATCTAGAATGACAAACTGATACTTGTCAGCTTCCGAGGCTGAGGTTATTTTTCCAGGCAAAGTAATTGCATATTAAATCTTATATTCTTTCTTCCTTTCATTTCGTCTTTTATATTATGTTTGCTACCCTCTGAAATTCATCATGTAAACCATTATCTTCGAAGGAAGGCAATTATACTTCCTTTGACGTAAATGATTCCAACTTTTTGAGAATAAATTTTCTCAGGAACATTTTTATTTCATTGGATAGGAGCATTGAGATGACAGGCTACTAACGTGCTTAACCGTGTGCATCTCTGAACATGACTTTCACGTCTGTGCTGCATATTACATTATTTTAACTTTCAGGATTAGTTTAGTAAAATTTTGGAAATGACTTGTTTTATTTCCATGTTCCTTCTGCTTAGAGTAAGAGCTCAAATCCATCGCTTGTAGATATTATCCACTTTAGTCCGTTACGTATTGCGGTCAACCTCACGGTTTTATAACGCGTCTGCTAGGGAGAGGTTTCTACACCCTTAGCAATGTTTCGTTCCCCTCTTCAACCGATTTGGGATCTCACAATTTACTCCCTTTGGGGGTCTAGCGTCTTCGCTGGCACACCGCCCTGTGTCTAGCTCTGACACCATTTGTAAAATCTCAAGCCCACTGCTGGCAGATATTGTTCACTTTGACTAGTTACGTATCGCCATCAGCCTCACGTTTCTATAAACGCATCTCTAGGAAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTTTCTTCTCCAACCGACGTGGGATCTCACAAATCTATTTTCTTTATCCCCCATGAACATTATTGCATTAGCAACTTAAAATTTATAAATGGGGTTTATTAATTCCATGAACCAAATTCCTCCTTTCACCCCCAAAGAACTGGTTTTACATCGTAGTGGTATCTTTGACTCAAATAACCTATGCAGATGTCATTCTCTATATGATATTCTATGCTCCAATTCATTCTAATGGAGAGATGAGAAACCTCTTCTCTCTTTTTCATGCAAATACGAGATTGGATACAATTTCATCTGAGTTCCACATACATTTGCATAGCCACCGGGGTTTTCTGGTCTATTGTATTGTTTTATTATAGACAGGAGTCTGCCATCCATCCTTTTCCTTTTCTAATCACAAATAAACATTCATTTTCATGTTTGTTTCAGGTGAGTCGCTCGCCCGTTTTCAAAGCTATGCTTGAGAATGAAATGGAAGAAAGTCGTAGTGGTACCATAAAGATCAGCGACGTTTCATTCGATGCCCTCCGCGCCTTTGTCAATTATTTGTACACAGCAGAAGCCTGTCTTGATGAGCAAATGGCTTATGACCTTTTAGTTTTGGCTGAGAAGTATCAGGTGAAGCATCTGAAGTCACATTGCGAGAAGTTCCTAATATCAAAACTGAACTGGGACAACTCAATCATGAACTACACCTTTGCACACCAGCACAATGGCAAGCATATGATCGATGCAGCTCTGTCGGTGATTATCGACAACATGGACAAGCTTACCAAGAGGGAGGAGTACATGGAGCTCGTCGAGAAGGATCCACGGCTTGTCGTGGAAATCTACGAAGCATACATGTCTAAACAGGTAAATACTGCTGCTTGTAAGGATTGTTCTGTGAAATAAAACTCAAGTAGATCTTATAGCCATTGTGATTTGTTTTGTGTGCTTGCAAGAACTGTTTTGTTACTTAGATTACGATGAGCATGCACTCCAATAATACCTCGAATGTATCTTGTTAAACAAAAACTAGAACGTAATCCAATCGATATAAATATGCTTGTTTGGCTA TCGGCGTTCAAAAAGTAATCTTTCATCGATCGTCGTCACTCTCTTTCAAACCTTTTCCGTTGAATCGAACGAACGAACGAGAATCTTTCACTGAATTGCAGCACCGACGACGAACTTTCCGATGCATCGCCGCCGGTGCGTGTCGTCCAGAGCCATTTCGGACGCAGAGAGTGAGTCCGATAACGAAATGATGAAGTGCTTGTCGTGTCTGGAGGATTACAGGTCACGCGACGCCGGAACCTGCAAGGAGTGCTACGAGGAAGCTAATGAGACTGAGGAAGAGCTCAAGCGTGAGATCGAAGACTTGAAAGCTAAAGTTGCTTTCCTCAGGTTTTGGTCCCCTCTCGATCATCTTCATAATCGGTCGAATGCTCCTTGCTTTACTGATGTTGTTTTGATCGCCTCCGGCGATGGCGCTGAGGGATATGCTGTGCCACTTCCCGCTCATAAAGCTGTCTTGGTGAGTCGCTCGCCCGTTTTCAAAGCTATGCTTGAGAATGAAATGGAAGAAAGTCGTAGTGGTACCATAAAGATCAGCGACGTTTCATTCGATGCCCTCCGCGCCTTTGTCAATTATTTGTACACAGCAGAAGCCTGTCTTGATGAGCAAATGGCTTATGACCTTTTAGTTTTGGCTGAGAAGTATCAGGTGAAGCATCTGAAGTCACATTGCGAGAAGTTCCTAATATCAAAACTGAACTGGGACAACTCAATCATGAACTACACCTTTGCACACCAGCACAATGGCAAGCATATGATCGATGCAGCTCTGTCGGTGATTATCGACAACATGGACAAGCTTACCAAGAGGGAGGAGTACATGGAGCTCGTCGAGAAGGATCCACGGCTTGTCGTGGAAATCTACGAAGCATACATGTCTAAACAGGTAAATACTGCTGCTTGTAAGGATTGTTCTGTGAAATAAAACTCAAGTAGATCTTATAGCCATTGTGATTTGTTTTGTGTGCTTGCAAGAACTGTTTTGTTACTTAGATTACGATGAGCATGCACTCCAATAATACCTCGAATGTATCTTGTTAAACAAAAACTAGAACGTAATCCAATCGATATAAATATGCTTGTTTGGCTA ATGCATCGCCGCCGGTGCGTGTCGTCCAGAGCCATTTCGGACGCAGAGAGTGAGTCCGATAACGAAATGATGAAGTGCTTGTCGTGTCTGGAGGATTACAGGTCACGCGACGCCGGAACCTGCAAGGAGTGCTACGAGGAAGCTAATGAGACTGAGGAAGAGCTCAAGCGTGAGATCGAAGACTTGAAAGCTAAAGTTGCTTTCCTCAGGTTTTGGTCCCCTCTCGATCATCTTCATAATCGGTCGAATGCTCCTTGCTTTACTGATGTTGTTTTGATCGCCTCCGGCGATGGCGCTGAGGGATATGCTGTGCCACTTCCCGCTCATAAAGCTGTCTTGGTGAGTCGCTCGCCCGTTTTCAAAGCTATGCTTGAGAATGAAATGGAAGAAAGTCGTAGTGGTACCATAAAGATCAGCGACGTTTCATTCGATGCCCTCCGCGCCTTTGTCAATTATTTGTACACAGCAGAAGCCTGTCTTGATGAGCAAATGGCTTATGACCTTTTAGTTTTGGCTGAGAAGTATCAGGTGAAGCATCTGAAGTCACATTGCGAGAAGTTCCTAATATCAAAACTGAACTGGGACAACTCAATCATGAACTACACCTTTGCACACCAGCACAATGGCAAGCATATGATCGATGCAGCTCTGTCGGTGATTATCGACAACATGGACAAGCTTACCAAGAGGGAGGAGTACATGGAGCTCGTCGAGAAGGATCCACGGCTTGTCGTGGAAATCTACGAAGCATACATGTCTAAACAGGTAAATACTGCTGCTTGTAAGGATTGTTCTGTGAAATAA MHRRRCVSSRAISDAESESDNEMMKCLSCLEDYRSRDAGTCKECYEEANETEEELKREIEDLKAKVAFLRFWSPLDHLHNRSNAPCFTDVVLIASGDGAEGYAVPLPAHKAVLVSRSPVFKAMLENEMEESRSGTIKISDVSFDALRAFVNYLYTAEACLDEQMAYDLLVLAEKYQVKHLKSHCEKFLISKLNWDNSIMNYTFAHQHNGKHMIDAALSVIIDNMDKLTKREEYMELVEKDPRLVVEIYEAYMSKQVNTAACKDCSVK Homology
BLAST of CmoCh09G010560 vs. ExPASy Swiss-Prot
Match: Q6DBN1 (BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana OX=3702 GN=At4g08455 PE=1 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 5.2e-97 Identity = 183/237 (77.22%), Postives = 207/237 (87.34%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy Swiss-Prot
Match: Q7ZX06 (Speckle-type POZ protein A OS=Xenopus laevis OX=8355 GN=spop-a PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.3e-19 Identity = 58/169 (34.32%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy Swiss-Prot
Match: Q0IHH9 (Speckle-type POZ protein B OS=Xenopus laevis OX=8355 GN=spop-b PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.3e-19 Identity = 58/169 (34.32%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy Swiss-Prot
Match: Q6P8B3 (Speckle-type POZ protein OS=Xenopus tropicalis OX=8364 GN=spop PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.3e-19 Identity = 58/169 (34.32%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy Swiss-Prot
Match: Q0VCW1 (Speckle-type POZ protein OS=Bos taurus OX=9913 GN=SPOP PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.8e-18 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy TrEMBL
Match: A0A6J1F7E6 (BTB/POZ domain-containing protein At4g08455 OS=Cucurbita moschata OX=3662 GN=LOC111443043 PE=4 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 2.3e-148 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy TrEMBL
Match: A0A6J1ILT3 (BTB/POZ domain-containing protein At4g08455-like OS=Cucurbita maxima OX=3661 GN=LOC111476767 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145 Identity = 263/267 (98.50%), Postives = 265/267 (99.25%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy TrEMBL
Match: A0A6J1CDJ9 (BTB/POZ domain-containing protein At4g08455 OS=Momordica charantia OX=3673 GN=LOC111010480 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 1.0e-143 Identity = 257/267 (96.25%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy TrEMBL
Match: A0A1S3BQZ2 (BTB/POZ domain-containing protein At4g08455 OS=Cucumis melo OX=3656 GN=LOC103492576 PE=4 SV=1) HSP 1 Score: 504.6 bits (1298), Expect = 2.5e-139 Identity = 250/267 (93.63%), Postives = 258/267 (96.63%), Query Frame = 0
BLAST of CmoCh09G010560 vs. ExPASy TrEMBL
Match: A0A6J1FR49 (BTB/POZ domain-containing protein At4g08455-like OS=Cucurbita moschata OX=3662 GN=LOC111446158 PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 7.1e-134 Identity = 241/267 (90.26%), Postives = 258/267 (96.63%), Query Frame = 0
BLAST of CmoCh09G010560 vs. NCBI nr
Match: XP_022936416.1 (BTB/POZ domain-containing protein At4g08455 [Cucurbita moschata]) HSP 1 Score: 534.6 bits (1376), Expect = 4.7e-148 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CmoCh09G010560 vs. NCBI nr
Match: XP_023534900.1 (BTB/POZ domain-containing protein At4g08455 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 525.8 bits (1353), Expect = 2.2e-145 Identity = 263/267 (98.50%), Postives = 263/267 (98.50%), Query Frame = 0
BLAST of CmoCh09G010560 vs. NCBI nr
Match: XP_022976333.1 (BTB/POZ domain-containing protein At4g08455-like [Cucurbita maxima]) HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145 Identity = 263/267 (98.50%), Postives = 265/267 (99.25%), Query Frame = 0
BLAST of CmoCh09G010560 vs. NCBI nr
Match: KAG7025010.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 521.9 bits (1343), Expect = 3.2e-144 Identity = 267/289 (92.39%), Postives = 267/289 (92.39%), Query Frame = 0
BLAST of CmoCh09G010560 vs. NCBI nr
Match: XP_022139624.1 (BTB/POZ domain-containing protein At4g08455 [Momordica charantia]) HSP 1 Score: 519.2 bits (1336), Expect = 2.1e-143 Identity = 257/267 (96.25%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of CmoCh09G010560 vs. TAIR 10
Match: AT4G08455.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 355.5 bits (911), Expect = 3.7e-98 Identity = 183/237 (77.22%), Postives = 207/237 (87.34%), Query Frame = 0
BLAST of CmoCh09G010560 vs. TAIR 10
Match: AT2G40450.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 78.6 bits (192), Expect = 8.6e-15 Identity = 53/171 (30.99%), Postives = 90/171 (52.63%), Query Frame = 0
BLAST of CmoCh09G010560 vs. TAIR 10
Match: AT1G01640.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.9e-14 Identity = 50/163 (30.67%), Postives = 87/163 (53.37%), Query Frame = 0
BLAST of CmoCh09G010560 vs. TAIR 10
Match: AT1G01640.2 (BTB/POZ domain-containing protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.9e-14 Identity = 50/163 (30.67%), Postives = 87/163 (53.37%), Query Frame = 0
BLAST of CmoCh09G010560 vs. TAIR 10
Match: AT5G48510.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 73.2 bits (178), Expect = 3.6e-13 Identity = 58/180 (32.22%), Postives = 92/180 (51.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|