CmoCh09G009640 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATAACGGTCGAATAGGATCATTTTTTGCTCGAGACCTTTTACTATTTATCATTAGTGGAAGTTAGAATTAATTCCCGTATATCTACTTCTATCGATGTGAGGAGGAAAGAAACCGTTAACCTTACTATTTTTTATCATGTGGGAGTTAGAATTAATTGTCGTTTATCTACTTCTATCAATGTGGGGAGGAAAGAAATGGTTGTATTCAACTACAAAGTTTATTTTGTACACCCGAGAGGTTCTATTTTTTTTTCGTTGATGGGAGTTATGGGTATCGGTTTATATGGTTCTAACAAACCAGCTTTGAATTTTGAAACATCGGCTAATCAGTCTTATCCTGTAGTGTTGTAA ATGTATAACGGTCGAATAGGATCATTTTTTGCTCGAGACCTTTTACTATTTATCATTATTAGAATTAATTCCCGTATATCTACTTCTATCGATGTGAGGAGGAAAGAAACCGTTAACCTTACTATTTTTTATCATGTGGGAGTTAGAATTAATTGTCGTTTATCTACTTCTATCAATGTGGGGAGGAAAGAAATGGTTGTATTCAACTACAAAGTTTATTTTGTACACCCGAGAGGTTCTATTTTTTTTTCGTTGATGGGAGTTATGGGTATCGGTTTATATGGTTCTAACAAACCAGCTTTGAATTTTGAAACATCGGCTAATCAGTCTTATCCTGTAGTGTTGTAA ATGTATAACGGTCGAATAGGATCATTTTTTGCTCGAGACCTTTTACTATTTATCATTATTAGAATTAATTCCCGTATATCTACTTCTATCGATGTGAGGAGGAAAGAAACCGTTAACCTTACTATTTTTTATCATGTGGGAGTTAGAATTAATTGTCGTTTATCTACTTCTATCAATGTGGGGAGGAAAGAAATGGTTGTATTCAACTACAAAGTTTATTTTGTACACCCGAGAGGTTCTATTTTTTTTTCGTTGATGGGAGTTATGGGTATCGGTTTATATGGTTCTAACAAACCAGCTTTGAATTTTGAAACATCGGCTAATCAGTCTTATCCTGTAGTGTTGTAA MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPALNFETSANQSYPVVL Homology
BLAST of CmoCh09G009640 vs. ExPASy Swiss-Prot
Match: Q4VZL8 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhD PE=2 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13 Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy Swiss-Prot
Match: Q09FZ6 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Platanus occidentalis OX=4403 GN=ndhD PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.6e-13 Identity = 48/115 (41.74%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy Swiss-Prot
Match: Q0ZIW8 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhD PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.6e-13 Identity = 48/115 (41.74%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy Swiss-Prot
Match: B2LMP8 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Guizotia abyssinica OX=4230 GN=ndhD PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12 Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy Swiss-Prot
Match: Q1KXQ3 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Helianthus annuus OX=4232 GN=ndhD PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12 Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy TrEMBL
Match: A0A6B9QIA5 (NADH-plastoquinone oxidoreductase subunit 4 OS=Corydalis trisecta OX=2682942 GN=ndhD PE=3 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 9.6e-19 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy TrEMBL
Match: A0A7L8HZ51 (NADH-plastoquinone oxidoreductase subunit 4 OS=Hippeastrum rutilum OX=214526 GN=ndhD PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 6.2e-18 Identity = 58/115 (50.43%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy TrEMBL
Match: A0A3P6DRL5 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC143T45662Z PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17 Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy TrEMBL
Match: A0A1Y3BU67 (Putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr00c0703g0576951 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.2e-15 Identity = 54/115 (46.96%), Postives = 67/115 (58.26%), Query Frame = 0
BLAST of CmoCh09G009640 vs. ExPASy TrEMBL
Match: G7JFZ4 (NAD(P)H-quinone oxidoreductase chain 4 OS=Medicago truncatula OX=3880 GN=MTR_4g050950 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.5e-13 Identity = 47/115 (40.87%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of CmoCh09G009640 vs. NCBI nr
Match: QHE65873.1 (NADH-plastoquinone oxidoreductase subunit 4 [Corydalis trisecta]) HSP 1 Score: 102.8 bits (255), Expect = 2.0e-18 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of CmoCh09G009640 vs. NCBI nr
Match: YP_010010482.1 (NADH-plastoquinone oxidoreductase subunit 4 [Hippeastrum rutilum] >QOE56828.1 NADH-plastoquinone oxidoreductase subunit 4 [Hippeastrum rutilum]) HSP 1 Score: 100.1 bits (248), Expect = 1.3e-17 Identity = 58/115 (50.43%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of CmoCh09G009640 vs. NCBI nr
Match: VDD26381.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 99.4 bits (246), Expect = 2.2e-17 Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = 0
BLAST of CmoCh09G009640 vs. NCBI nr
Match: KAG5631586.1 (hypothetical protein H5410_003303 [Solanum commersonii]) HSP 1 Score: 98.2 bits (243), Expect = 4.9e-17 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of CmoCh09G009640 vs. NCBI nr
Match: OTF84302.1 (putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit [Helianthus annuus]) HSP 1 Score: 91.7 bits (226), Expect = 4.6e-15 Identity = 54/115 (46.96%), Postives = 67/115 (58.26%), Query Frame = 0
BLAST of CmoCh09G009640 vs. TAIR 10
Match: ATCG01050.1 (NADH-Ubiquinone/plastoquinone (complex I) protein ) HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11 Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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