CmoCh09G006840 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh09G006840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr09: 3393200 .. 3394408 (-)
RNA-Seq ExpressionCmoCh09G006840
SyntenyCmoCh09G006840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCACCTTCACAACGACTCGCTCAACTCTCTGTGTTAAACTCCATCTTTTCTTCATCATCTTCTTCGATTCCTCTTCGTCTTCCTTCTTCTTCATTCTCTTTCTCCACTTCCCCTAAACAATCCTCTGCTCTTCCGCACAGGCTCAGCCATAGAGATTGGTTGTCTCCTAATGAAGTCATCAAAATCATCCAACAAATCAGAGATCCTCCCGCTGTGCTCGCGTTCATCCACCAATGGTCCAATCGCAAGGACTACAAACCCAACAAAGAAATCTACACTCTGGTTGTGTCCAGGCTTGCGGAGGGGTGTTTGTTTGATGATATTGAAACAGTGATGCTGAGAATAAAATCCGAAAGGAATTTTCGGTTGTCCGATGAATTTTTCTACCACGTTATCAAGATTTATGGCAATGTTGCTGGGCGTATAGGTAAAGCGATTGAAACCCTTTTCGATATGCCTAATTATAACTGCTGGCCGAGTGTTAAAACCTTTAATTTTGTGCTTAATTTGCTTGTTTCGGCGAAGATGTTTGACGTTGTTCATGAGGTGTATATGGGTGCTCCTAAGTTGGGGATTGAGATTGATGCTTGTTGTCTTAATATACTCATCAAAGGGTTGTGCGAGAGTGGGAATTTGAATGCTGCACTCAAGGTGTTCGATGAATTTCCTCAACAAAAGTGTAGGCCAAATGTGAGAACATTCTCAACGCTTATGCATGCATTGTGCGACAATGGTGAACTAGAGAGAGCATCTGAGCTTTTCTCTAGAATGGAAAACGAAGGTGTTTGTCCAGATACTATAACGTTTAACATATTGATTTCGGGTCTTAGAAAGCAGAAGAGGATTGAAGAGGCCATAGAACTTTTGGATAGAATGAAGCTCAAAGGCTGCTACCCCAATGCAGGGACTTATCAAGAGGTTTTGTATGGCCTGCTCGACTCGGGTAGGTTGATCGAGGCGAGGGATTGTATGCGTCGAATGATTTTGGATCGTATGGACCCAAGCTTTGTTTCTTACAAGAAATTGTTGTCTGGGTTATGCAAGAAGAATTTGACTGAGGATGTGGATTGGGTTCTAAAGCAGATGGTTATGCAAGGTTTCGTCCCGAAAATGGAGATGTGGAAAGCGATTTTACGCTGTATGTTAGCAGGAAATGAAGATTACAGTGAAGCCACTGGTAAAGTAATCGAAAAACTTATATGA

mRNA sequence

ATGGTTTCACCTTCACAACGACTCGCTCAACTCTCTGTGTTAAACTCCATCTTTTCTTCATCATCTTCTTCGATTCCTCTTCGTCTTCCTTCTTCTTCATTCTCTTTCTCCACTTCCCCTAAACAATCCTCTGCTCTTCCGCACAGGCTCAGCCATAGAGATTGGTTGTCTCCTAATGAAGTCATCAAAATCATCCAACAAATCAGAGATCCTCCCGCTGTGCTCGCGTTCATCCACCAATGGTCCAATCGCAAGGACTACAAACCCAACAAAGAAATCTACACTCTGGTTGTGTCCAGGCTTGCGGAGGGGTGTTTGTTTGATGATATTGAAACAGTGATGCTGAGAATAAAATCCGAAAGGAATTTTCGGTTGTCCGATGAATTTTTCTACCACGTTATCAAGATTTATGGCAATGTTGCTGGGCGTATAGGTAAAGCGATTGAAACCCTTTTCGATATGCCTAATTATAACTGCTGGCCGAGTGTTAAAACCTTTAATTTTGTGCTTAATTTGCTTGTTTCGGCGAAGATGTTTGACGTTGTTCATGAGGTGTATATGGGTGCTCCTAAGTTGGGGATTGAGATTGATGCTTGTTGTCTTAATATACTCATCAAAGGGTTGTGCGAGAGTGGGAATTTGAATGCTGCACTCAAGGTGTTCGATGAATTTCCTCAACAAAAGTGTAGGCCAAATGTGAGAACATTCTCAACGCTTATGCATGCATTGTGCGACAATGGTGAACTAGAGAGAGCATCTGAGCTTTTCTCTAGAATGGAAAACGAAGGTGTTTGTCCAGATACTATAACGTTTAACATATTGATTTCGGGTCTTAGAAAGCAGAAGAGGATTGAAGAGGCCATAGAACTTTTGGATAGAATGAAGCTCAAAGGCTGCTACCCCAATGCAGGGACTTATCAAGAGGTTTTGTATGGCCTGCTCGACTCGGGTAGGTTGATCGAGGCGAGGGATTGTATGCGTCGAATGATTTTGGATCGTATGGACCCAAGCTTTGTTTCTTACAAGAAATTGTTGTCTGGGTTATGCAAGAAGAATTTGACTGAGGATGTGGATTGGGTTCTAAAGCAGATGGTTATGCAAGGTTTCGTCCCGAAAATGGAGATGTGGAAAGCGATTTTACGCTGTATGTTAGCAGGAAATGAAGATTACAGTGAAGCCACTGGTAAAGTAATCGAAAAACTTATATGA

Coding sequence (CDS)

ATGGTTTCACCTTCACAACGACTCGCTCAACTCTCTGTGTTAAACTCCATCTTTTCTTCATCATCTTCTTCGATTCCTCTTCGTCTTCCTTCTTCTTCATTCTCTTTCTCCACTTCCCCTAAACAATCCTCTGCTCTTCCGCACAGGCTCAGCCATAGAGATTGGTTGTCTCCTAATGAAGTCATCAAAATCATCCAACAAATCAGAGATCCTCCCGCTGTGCTCGCGTTCATCCACCAATGGTCCAATCGCAAGGACTACAAACCCAACAAAGAAATCTACACTCTGGTTGTGTCCAGGCTTGCGGAGGGGTGTTTGTTTGATGATATTGAAACAGTGATGCTGAGAATAAAATCCGAAAGGAATTTTCGGTTGTCCGATGAATTTTTCTACCACGTTATCAAGATTTATGGCAATGTTGCTGGGCGTATAGGTAAAGCGATTGAAACCCTTTTCGATATGCCTAATTATAACTGCTGGCCGAGTGTTAAAACCTTTAATTTTGTGCTTAATTTGCTTGTTTCGGCGAAGATGTTTGACGTTGTTCATGAGGTGTATATGGGTGCTCCTAAGTTGGGGATTGAGATTGATGCTTGTTGTCTTAATATACTCATCAAAGGGTTGTGCGAGAGTGGGAATTTGAATGCTGCACTCAAGGTGTTCGATGAATTTCCTCAACAAAAGTGTAGGCCAAATGTGAGAACATTCTCAACGCTTATGCATGCATTGTGCGACAATGGTGAACTAGAGAGAGCATCTGAGCTTTTCTCTAGAATGGAAAACGAAGGTGTTTGTCCAGATACTATAACGTTTAACATATTGATTTCGGGTCTTAGAAAGCAGAAGAGGATTGAAGAGGCCATAGAACTTTTGGATAGAATGAAGCTCAAAGGCTGCTACCCCAATGCAGGGACTTATCAAGAGGTTTTGTATGGCCTGCTCGACTCGGGTAGGTTGATCGAGGCGAGGGATTGTATGCGTCGAATGATTTTGGATCGTATGGACCCAAGCTTTGTTTCTTACAAGAAATTGTTGTCTGGGTTATGCAAGAAGAATTTGACTGAGGATGTGGATTGGGTTCTAAAGCAGATGGTTATGCAAGGTTTCGTCCCGAAAATGGAGATGTGGAAAGCGATTTTACGCTGTATGTTAGCAGGAAATGAAGATTACAGTGAAGCCACTGGTAAAGTAATCGAAAAACTTATATGA

Protein sequence

MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI
Homology
[Close]
BLAST of CmoCh09G006840 vs. ExPASy Swiss-Prot
Match: Q9LUD6 (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g14580 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 8.2e-123
Identity = 209/377 (55.44%), Postives = 283/377 (75.07%), Query Frame = 0 

Query: 19  SSSSSSIPLRLPSSSFSFSTSPKQSSALPH--RLSHRDWLSPNEVIKIIQQIRDPPAVLA 78
           S SSS + +   SSS  +++S ++ S      RL H+DWL+PNEV+KI   ++DP  +L 
Sbjct: 21  SLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLP 80

Query: 79  FIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKI 138
               +S RKDY+P + +Y L++++  +  ++D+IE VM  IK E+  R S+EFFY++++I
Sbjct: 81  AYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRI 140

Query: 139 YGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEI 198
           YGN+AGRI +AIE LF MP++ CWPS K+FNF+LNLLVSAK+FD +H++++ APKLG+EI
Sbjct: 141 YGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI 200

Query: 199 DACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELF 258
           DACCLNILIKGLCESGNL AAL++ DEFPQQK RPNV TFS L+   C+ G+ E A +L 
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260

Query: 259 SRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDS 318
            RME E + PDTITFNILISGLRK+ R+EE I+LL+RMK+KGC PN GTYQEVLYGLLD 
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320

Query: 319 GRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMW 378
            R +EA++ M +MI   M PSF+SYKK++ GLC+     ++DWVL+QMV  GFVPK  MW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380

Query: 379 KAILRCMLAGNEDYSEA 394
             +++C+++ N D S+A
Sbjct: 381 WKVVQCVVSKNNDDSQA 397

[Close]
BLAST of CmoCh09G006840 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-41
Identity = 95/328 (28.96%), Postives = 173/328 (52.74%), Query Frame = 0 

Query: 56  LSPNEVIKIIQQIRDPPAVLAFIHQWSNR--KDYKPNKEIYTLVVSRLAEGCLFDDIETV 115
           ++P++VIK+++  +D    +A     +      Y  ++  +  +V RL     F   E +
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 116 MLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLL 175
           ++R+K E N  +S++    + + YG V  R   ++     M +++C PS K +  VL +L
Sbjct: 74  IVRMKIE-NCVVSEDILLSICRGYGRV-HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 133

Query: 176 VSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCES-GNLNAALKVFDEFPQQKCRPN 235
           V     ++  + Y    ++G+      LN+LIK LC + G ++A LK+F E P++ C P+
Sbjct: 134 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 193

Query: 236 VRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLD 295
             T+ TL+  LC  G ++ A +LF+ M  +   P  +T+  LI+GL   K ++EA+  L+
Sbjct: 194 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 253

Query: 296 RMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKN 355
            MK KG  PN  TY  ++ GL   GR ++A +    M+     P+ V+Y  L++GLCK+ 
Sbjct: 254 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 313

Query: 356 LTEDVDWVLKQMVMQGFVPKMEMWKAIL 381
             ++   +L +M +QG  P   ++  ++
Sbjct: 314 KIQEAVELLDRMNLQGLKPDAGLYGKVI 339

[Close]
BLAST of CmoCh09G006840 vs. ExPASy Swiss-Prot
Match: Q8LDU5 (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 3.1e-37
Identity = 94/358 (26.26%), Postives = 186/358 (51.96%), Query Frame = 0 

Query: 31  SSSFSFSTSPKQSSALPHRLSHRDWL-SPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKP 90
           SS F F +S +  +  P   + +  + SP  V K+I    DP          S + +++ 
Sbjct: 23  SSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRH 82

Query: 91  NKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIE 150
           ++  + +++ +L  G  F+ I+ V+ + +S   + L+ E F ++IK+Y   A    K + 
Sbjct: 83  SRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTGEIFTYLIKVYAE-AKLPEKVLS 142

Query: 151 TLFDMPNYNCWPSVKTFNFVLNLLVSAKMF-DVVHEVYMGAPKLGIEIDACCLNILIKGL 210
           T + M  +N  P  K  N +L++LVS + +     E++  +   G+  +    N+L++  
Sbjct: 143 TFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF 202

Query: 211 CESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDT 270
           C + +L+ A ++F +  ++   P+V ++  L+   C  G++  A EL   M N+G  PD 
Sbjct: 203 CLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR 262

Query: 271 ITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRR 330
           +++  L++ L ++ ++ EA +LL RMKLKGC P+   Y  ++ G     R ++AR  +  
Sbjct: 263 LSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDD 322

Query: 331 MILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAG 387
           M+ +   P+ VSY+ L+ GLC + + ++    L++M+ +GF P      ++  C++ G
Sbjct: 323 MLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF----SVSNCLVKG 374

[Close]
BLAST of CmoCh09G006840 vs. ExPASy Swiss-Prot
Match: Q9LQQ1 (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.3e-37
Identity = 97/344 (28.20%), Postives = 177/344 (51.45%), Query Frame = 0 

Query: 41  KQSSALP-HRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSN---RKDYKPNKEIYTL 100
           K SS  P H+ + + W      +  +++I DP   L+  HQ+     R DY      Y+ 
Sbjct: 32  KASSHEPTHKFTRKPW-EEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPS----YSS 91

Query: 101 VVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPN 160
           ++ +LA+   FD ++ + LR+   RN R  +  F  +I+ YG  AG + KAI+    + +
Sbjct: 92  LIYKLAKSRNFDAVDQI-LRLVRYRNVRCRESLFMGLIQHYGK-AGSVDKAIDVFHKITS 151

Query: 161 YNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNA 220
           ++C  ++++ N ++N+LV     +     + GA  + +  ++   NILIKG  +  +  A
Sbjct: 152 FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEA 211

Query: 221 ALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILIS 280
           A KVFDE  + + +P+V T+++L+  LC N ++ +A  L   M  + + P+ +TF +L+ 
Sbjct: 212 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 271

Query: 281 GLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDP 340
           GL  +    EA +L+  M+ +GC P    Y  ++  L   GR+ EA+  +  M   R+ P
Sbjct: 272 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 331

Query: 341 SFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAIL 381
             V Y  L++ LC +    +   VL +M M+G  P    ++ ++
Sbjct: 332 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368

[Close]
BLAST of CmoCh09G006840 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-36
Identity = 101/366 (27.60%), Postives = 178/366 (48.63%), Query Frame = 0 

Query: 25  IPLRLPSSSFSFSTSPKQSS-----ALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIH 84
           IP+R+   S+    S   SS     ++  R S    +SPN  +++++   + P       
Sbjct: 6   IPIRISFFSYFLKESRILSSNPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFK 65

Query: 85  QWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGN 144
                  +K      + ++   A    FD +E ++ RI+ E N  + +  F  V + YG 
Sbjct: 66  SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE-NRVIIERSFIVVFRAYGK 125

Query: 145 VAGRIGKAIETLFDM-PNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVY----MGAPKLGI 204
            A    KA++    M   + C  SVK+FN VLN++++  ++    E Y         + I
Sbjct: 126 -AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 185

Query: 205 EIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASE 264
             +    N++IK LC+   ++ A++VF   P++KC P+  T+ TLM  LC    ++ A  
Sbjct: 186 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 245

Query: 265 LFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLL 324
           L   M++EG  P  + +N+LI GL K+  +    +L+D M LKGC PN  TY  +++GL 
Sbjct: 246 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 305

Query: 325 DSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKME 381
             G+L +A   + RM+  +  P+ V+Y  L++GL K+    D   +L  M  +G+     
Sbjct: 306 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 365

[Close]
BLAST of CmoCh09G006840 vs. ExPASy TrEMBL
Match: A0A6J1F762 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111442728 PE=4 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 7.3e-207
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0 

Query: 50  LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 109
           LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD
Sbjct: 21  LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 80

Query: 110 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 169
           IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV
Sbjct: 81  IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 140

Query: 170 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 229
           LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC
Sbjct: 141 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 200

Query: 230 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 289
           RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE
Sbjct: 201 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 260

Query: 290 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 349
           LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC
Sbjct: 261 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 320

Query: 350 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI
Sbjct: 321 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 373

[Close]
BLAST of CmoCh09G006840 vs. ExPASy TrEMBL
Match: A0A6J1IHV8 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477066 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.9e-202
Identity = 343/352 (97.44%), Postives = 349/352 (99.15%), Query Frame = 0 

Query: 50  LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 109
           LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD
Sbjct: 21  LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 80

Query: 110 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 169
           IETVMLRIK+ERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV
Sbjct: 81  IETVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 140

Query: 170 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 229
           LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGN NAALKVFDEFPQQKC
Sbjct: 141 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNFNAALKVFDEFPQQKC 200

Query: 230 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 289
           RPNVRTFSTLMHALCDNGELERASELFS+MENEGVCPDTITFNILISGLRKQKRIEEAIE
Sbjct: 201 RPNVRTFSTLMHALCDNGELERASELFSKMENEGVCPDTITFNILISGLRKQKRIEEAIE 260

Query: 290 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 349
           LL+RMKLKGCYPNAGTYQEVLYGLLDSGRLIEA+DCMRRMILD MDPSFVSYKKLLSGLC
Sbjct: 261 LLERMKLKGCYPNAGTYQEVLYGLLDSGRLIEAKDCMRRMILDGMDPSFVSYKKLLSGLC 320

Query: 350 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL 402
           KKNLTEDVDWVLKQMVMQGF+PKMEMWKAILRC LAGNEDYS+ATGKVIEKL
Sbjct: 321 KKNLTEDVDWVLKQMVMQGFIPKMEMWKAILRCTLAGNEDYSDATGKVIEKL 372

[Close]
BLAST of CmoCh09G006840 vs. ExPASy TrEMBL
Match: A0A0A0KZE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621180 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.8e-197
Identity = 340/402 (84.58%), Postives = 367/402 (91.29%), Query Frame = 0 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           M+  S RL+QL +LNSIFSSSS SIPL LPSSS SFSTSPKQ S  PH+LSHRDWLSPNE
Sbjct: 1   MIRSSLRLSQLFLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFPHKLSHRDWLSPNE 60

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VI IIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTLVVSRLAEG LFDDIE VMLRIK+E
Sbjct: 61  VINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAE 120

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AALKV DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLL 240

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           H LC+NGEL RA ELF +MENEGVCPDTITFNILISGLRK+KRIEEAIELL RMKLKGCY
Sbjct: 241 HGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCY 300

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLD+G+ IEARDCM RMI + MDPSFVSYKKLLSGLCKK LTEDVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDWV 360

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           LKQMVMQGFVPK+ MWK ILRCML+GNE+  + T +V EK +
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCMLSGNEECIDITDEVFEKFV 402

[Close]
BLAST of CmoCh09G006840 vs. ExPASy TrEMBL
Match: A0A5D3DWG4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001860 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 6.4e-195
Identity = 336/402 (83.58%), Postives = 367/402 (91.29%), Query Frame = 0 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           M+  S RL+QLS+LNSIFSSSS SIPL LPSSS SFSTSPKQ S   H+LSHRDWLSPNE
Sbjct: 1   MIRSSLRLSQLSLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFSHKLSHRDWLSPNE 60

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VIKIIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTL+VSRLAEG LFDDIE VMLRIK+E
Sbjct: 61  VIKIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLIVSRLAEGRLFDDIEKVMLRIKAE 120

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLSKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AA K+ DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAAFKLLDEFPQQRCRPNVRTFSTLL 240

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           H LC+NGELERA ELF +MENEGV PDTITFNILISGLRK+KRIEEAIELL RM+LKGC 
Sbjct: 241 HGLCENGELERALELFCKMENEGVWPDTITFNILISGLRKKKRIEEAIELLRRMELKGCD 300

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLD+G+ IEARDCM RMI D MDPSFVSYKKLLSGLCKKNLT+DVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISDGMDPSFVSYKKLLSGLCKKNLTQDVDWV 360

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           LKQMVMQGFVPK+ MWK ILRC+L+GNE+  + T  V EK++
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCVLSGNEECIDITDDVFEKVV 402

[Close]
BLAST of CmoCh09G006840 vs. ExPASy TrEMBL
Match: A0A1S3CJT2 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501764 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 6.4e-195
Identity = 336/402 (83.58%), Postives = 367/402 (91.29%), Query Frame = 0 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           M+  S RL+QLS+LNSIFSSSS SIPL LPSSS SFSTSPKQ S   H+LSHRDWLSPNE
Sbjct: 1   MIRSSLRLSQLSLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFSHKLSHRDWLSPNE 60

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VIKIIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTL+VSRLAEG LFDDIE VMLRIK+E
Sbjct: 61  VIKIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLIVSRLAEGRLFDDIEKVMLRIKAE 120

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLSKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AA K+ DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAAFKLLDEFPQQRCRPNVRTFSTLL 240

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           H LC+NGELERA ELF +MENEGV PDTITFNILISGLRK+KRIEEAIELL RM+LKGC 
Sbjct: 241 HGLCENGELERALELFCKMENEGVWPDTITFNILISGLRKKKRIEEAIELLRRMELKGCD 300

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLD+G+ IEARDCM RMI D MDPSFVSYKKLLSGLCKKNLT+DVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISDGMDPSFVSYKKLLSGLCKKNLTQDVDWV 360

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           LKQMVMQGFVPK+ MWK ILRC+L+GNE+  + T  V EK++
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCVLSGNEECIDITDDVFEKVV 402

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: KAG7024666.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 810.1 bits (2091), Expect = 8.8e-231
Identity = 401/402 (99.75%), Postives = 402/402 (100.00%), Query Frame = 0 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE
Sbjct: 91  MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 150

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE
Sbjct: 151 VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 210

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 211 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 270

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM
Sbjct: 271 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 330

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY
Sbjct: 331 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 390

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV
Sbjct: 391 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 450

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL+
Sbjct: 451 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 492

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: KAG6591788.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 809.3 bits (2089), Expect = 1.5e-230
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE
Sbjct: 91  MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 150

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE
Sbjct: 151 VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 210

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 211 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 270

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM
Sbjct: 271 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 330

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY
Sbjct: 331 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 390

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV
Sbjct: 391 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 450

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL 402
           LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL
Sbjct: 451 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL 491

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: XP_022935997.1 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucurbita moschata])

HSP 1 Score: 729.6 bits (1882), Expect = 1.5e-206
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0 

Query: 50  LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 109
           LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD
Sbjct: 21  LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 80

Query: 110 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 169
           IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV
Sbjct: 81  IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 140

Query: 170 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 229
           LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC
Sbjct: 141 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 200

Query: 230 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 289
           RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE
Sbjct: 201 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 260

Query: 290 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 349
           LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC
Sbjct: 261 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 320

Query: 350 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI
Sbjct: 321 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 373

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: XP_022976791.1 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucurbita maxima])

HSP 1 Score: 714.9 bits (1844), Expect = 3.8e-202
Identity = 343/352 (97.44%), Postives = 349/352 (99.15%), Query Frame = 0 

Query: 50  LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 109
           LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD
Sbjct: 21  LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 80

Query: 110 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 169
           IETVMLRIK+ERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV
Sbjct: 81  IETVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 140

Query: 170 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 229
           LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGN NAALKVFDEFPQQKC
Sbjct: 141 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNFNAALKVFDEFPQQKC 200

Query: 230 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 289
           RPNVRTFSTLMHALCDNGELERASELFS+MENEGVCPDTITFNILISGLRKQKRIEEAIE
Sbjct: 201 RPNVRTFSTLMHALCDNGELERASELFSKMENEGVCPDTITFNILISGLRKQKRIEEAIE 260

Query: 290 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 349
           LL+RMKLKGCYPNAGTYQEVLYGLLDSGRLIEA+DCMRRMILD MDPSFVSYKKLLSGLC
Sbjct: 261 LLERMKLKGCYPNAGTYQEVLYGLLDSGRLIEAKDCMRRMILDGMDPSFVSYKKLLSGLC 320

Query: 350 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL 402
           KKNLTEDVDWVLKQMVMQGF+PKMEMWKAILRC LAGNEDYS+ATGKVIEKL
Sbjct: 321 KKNLTEDVDWVLKQMVMQGFIPKMEMWKAILRCTLAGNEDYSDATGKVIEKL 372

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: XP_038897506.1 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Benincasa hispida])

HSP 1 Score: 710.3 bits (1832), Expect = 9.5e-201
Identity = 349/402 (86.82%), Postives = 375/402 (93.28%), Query Frame = 0 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           M+ PS RL QLS+LNSIFSSSSSSIPL L SSS SFSTS +Q SA PHRLSHRDWLSPNE
Sbjct: 1   MILPSLRLTQLSLLNSIFSSSSSSIPLHLLSSSSSFSTSSRQPSAFPHRLSHRDWLSPNE 60

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VI IIQQI+ PP++LAF+HQWSNRKDYKPNKEIYTLVVSRLAEG LFDDIE VMLRIK+E
Sbjct: 61  VIIIIQQIKHPPSLLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAE 120

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSD+FFYHVIKIYG+VAGRIGKAI+TLFDMPNYNCWPS+KTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDDFFYHVIKIYGHVAGRIGKAIDTLFDMPNYNCWPSLKTFNFVLNLLVSAKMFD 180

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNL+AALKVFDEFPQQ+C PNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLDAALKVFDEFPQQRCTPNVRTFSTLL 240

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           HALC+NGELERASELFS+MENEGVCPDTITFNILISGLRKQKRIEEAIELL RMKLKGCY
Sbjct: 241 HALCENGELERASELFSKMENEGVCPDTITFNILISGLRKQKRIEEAIELLGRMKLKGCY 300

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLD+ + IEARDCM RMI   M+PSFVSYKKLLSGLCKKNLTEDVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTEKFIEARDCMLRMISGGMEPSFVSYKKLLSGLCKKNLTEDVDWV 360

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           LKQMVMQGFVPKM MWK ILRCML+GNE+ ++ T KV EK++
Sbjct: 361 LKQMVMQGFVPKMGMWKVILRCMLSGNEECTDITDKVTEKVM 402

[Close]
BLAST of CmoCh09G006840 vs. TAIR 10
Match: AT3G14580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 441.8 bits (1135), Expect = 5.8e-124
Identity = 209/377 (55.44%), Postives = 283/377 (75.07%), Query Frame = 0 

Query: 19  SSSSSSIPLRLPSSSFSFSTSPKQSSALPH--RLSHRDWLSPNEVIKIIQQIRDPPAVLA 78
           S SSS + +   SSS  +++S ++ S      RL H+DWL+PNEV+KI   ++DP  +L 
Sbjct: 21  SLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLP 80

Query: 79  FIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKI 138
               +S RKDY+P + +Y L++++  +  ++D+IE VM  IK E+  R S+EFFY++++I
Sbjct: 81  AYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRI 140

Query: 139 YGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEI 198
           YGN+AGRI +AIE LF MP++ CWPS K+FNF+LNLLVSAK+FD +H++++ APKLG+EI
Sbjct: 141 YGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI 200

Query: 199 DACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELF 258
           DACCLNILIKGLCESGNL AAL++ DEFPQQK RPNV TFS L+   C+ G+ E A +L 
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260

Query: 259 SRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDS 318
            RME E + PDTITFNILISGLRK+ R+EE I+LL+RMK+KGC PN GTYQEVLYGLLD 
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320

Query: 319 GRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMW 378
            R +EA++ M +MI   M PSF+SYKK++ GLC+     ++DWVL+QMV  GFVPK  MW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380

Query: 379 KAILRCMLAGNEDYSEA 394
             +++C+++ N D S+A
Sbjct: 381 WKVVQCVVSKNNDDSQA 397

[Close]
BLAST of CmoCh09G006840 vs. TAIR 10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-42
Identity = 95/328 (28.96%), Postives = 173/328 (52.74%), Query Frame = 0 

Query: 56  LSPNEVIKIIQQIRDPPAVLAFIHQWSNR--KDYKPNKEIYTLVVSRLAEGCLFDDIETV 115
           ++P++VIK+++  +D    +A     +      Y  ++  +  +V RL     F   E +
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 116 MLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLL 175
           ++R+K E N  +S++    + + YG V  R   ++     M +++C PS K +  VL +L
Sbjct: 74  IVRMKIE-NCVVSEDILLSICRGYGRV-HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 133

Query: 176 VSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCES-GNLNAALKVFDEFPQQKCRPN 235
           V     ++  + Y    ++G+      LN+LIK LC + G ++A LK+F E P++ C P+
Sbjct: 134 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 193

Query: 236 VRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLD 295
             T+ TL+  LC  G ++ A +LF+ M  +   P  +T+  LI+GL   K ++EA+  L+
Sbjct: 194 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 253

Query: 296 RMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKN 355
            MK KG  PN  TY  ++ GL   GR ++A +    M+     P+ V+Y  L++GLCK+ 
Sbjct: 254 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 313

Query: 356 LTEDVDWVLKQMVMQGFVPKMEMWKAIL 381
             ++   +L +M +QG  P   ++  ++
Sbjct: 314 KIQEAVELLDRMNLQGLKPDAGLYGKVI 339

[Close]
BLAST of CmoCh09G006840 vs. TAIR 10
Match: AT4G01400.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). )

HSP 1 Score: 157.5 bits (397), Expect = 2.2e-38
Identity = 94/358 (26.26%), Postives = 186/358 (51.96%), Query Frame = 0 

Query: 31  SSSFSFSTSPKQSSALPHRLSHRDWL-SPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKP 90
           SS F F +S +  +  P   + +  + SP  V K+I    DP          S + +++ 
Sbjct: 23  SSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRH 82

Query: 91  NKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIE 150
           ++  + +++ +L  G  F+ I+ V+ + +S   + L+ E F ++IK+Y   A    K + 
Sbjct: 83  SRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTGEIFTYLIKVYAE-AKLPEKVLS 142

Query: 151 TLFDMPNYNCWPSVKTFNFVLNLLVSAKMF-DVVHEVYMGAPKLGIEIDACCLNILIKGL 210
           T + M  +N  P  K  N +L++LVS + +     E++  +   G+  +    N+L++  
Sbjct: 143 TFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF 202

Query: 211 CESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDT 270
           C + +L+ A ++F +  ++   P+V ++  L+   C  G++  A EL   M N+G  PD 
Sbjct: 203 CLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR 262

Query: 271 ITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRR 330
           +++  L++ L ++ ++ EA +LL RMKLKGC P+   Y  ++ G     R ++AR  +  
Sbjct: 263 LSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDD 322

Query: 331 MILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAG 387
           M+ +   P+ VSY+ L+ GLC + + ++    L++M+ +GF P      ++  C++ G
Sbjct: 323 MLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF----SVSNCLVKG 374

[Close]
BLAST of CmoCh09G006840 vs. TAIR 10
Match: AT1G07740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 3.8e-38
Identity = 97/344 (28.20%), Postives = 177/344 (51.45%), Query Frame = 0 

Query: 41  KQSSALP-HRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSN---RKDYKPNKEIYTL 100
           K SS  P H+ + + W      +  +++I DP   L+  HQ+     R DY      Y+ 
Sbjct: 32  KASSHEPTHKFTRKPW-EEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPS----YSS 91

Query: 101 VVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPN 160
           ++ +LA+   FD ++ + LR+   RN R  +  F  +I+ YG  AG + KAI+    + +
Sbjct: 92  LIYKLAKSRNFDAVDQI-LRLVRYRNVRCRESLFMGLIQHYGK-AGSVDKAIDVFHKITS 151

Query: 161 YNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNA 220
           ++C  ++++ N ++N+LV     +     + GA  + +  ++   NILIKG  +  +  A
Sbjct: 152 FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEA 211

Query: 221 ALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILIS 280
           A KVFDE  + + +P+V T+++L+  LC N ++ +A  L   M  + + P+ +TF +L+ 
Sbjct: 212 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 271

Query: 281 GLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDP 340
           GL  +    EA +L+  M+ +GC P    Y  ++  L   GR+ EA+  +  M   R+ P
Sbjct: 272 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 331

Query: 341 SFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAIL 381
             V Y  L++ LC +    +   VL +M M+G  P    ++ ++
Sbjct: 332 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368

[Close]
BLAST of CmoCh09G006840 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-37
Identity = 101/366 (27.60%), Postives = 178/366 (48.63%), Query Frame = 0 

Query: 25  IPLRLPSSSFSFSTSPKQSS-----ALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIH 84
           IP+R+   S+    S   SS     ++  R S    +SPN  +++++   + P       
Sbjct: 6   IPIRISFFSYFLKESRILSSNPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFK 65

Query: 85  QWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGN 144
                  +K      + ++   A    FD +E ++ RI+ E N  + +  F  V + YG 
Sbjct: 66  SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE-NRVIIERSFIVVFRAYGK 125

Query: 145 VAGRIGKAIETLFDM-PNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVY----MGAPKLGI 204
            A    KA++    M   + C  SVK+FN VLN++++  ++    E Y         + I
Sbjct: 126 -AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 185

Query: 205 EIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASE 264
             +    N++IK LC+   ++ A++VF   P++KC P+  T+ TLM  LC    ++ A  
Sbjct: 186 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 245

Query: 265 LFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLL 324
           L   M++EG  P  + +N+LI GL K+  +    +L+D M LKGC PN  TY  +++GL 
Sbjct: 246 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 305

Query: 325 DSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKME 381
             G+L +A   + RM+  +  P+ V+Y  L++GL K+    D   +L  M  +G+     
Sbjct: 306 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 365

The following BLAST results are available for this feature:
BLAST of CmoCh09G006840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LUD68.2e-12355.44Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidop... [more]
Q9FNL22.1e-4128.96Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... [more]
Q8LDU53.1e-3726.26Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
Q9LQQ15.3e-3728.20Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop... [more]
O494361.5e-3627.60Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
BLAST of CmoCh09G006840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F7627.3e-207100.00pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucurbit... [more]
A0A6J1IHV81.9e-20297.44pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucurbit... [more]
A0A0A0KZE41.8e-19784.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621180 PE=4 SV=1[more]
A0A5D3DWG46.4e-19583.58Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CJT26.4e-19583.58pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucumis ... [more]
BLAST of CmoCh09G006840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024666.18.8e-23199.75Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6591788.11.5e-230100.00Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022935997.11.5e-206100.00pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucurbita ... [more]
XP_022976791.13.8e-20297.44pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucurbita ... [more]
XP_038897506.19.5e-20186.82pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Benincasa ... [more]
BLAST of CmoCh09G006840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G14580.15.8e-12455.44Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G46100.11.5e-4228.96Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G01400.32.2e-3826.26FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT1G07740.13.8e-3828.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G20090.11.1e-3727.60Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 122..248
e-value: 8.9E-25
score: 89.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 249..401
e-value: 8.4E-34
score: 119.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 339..369
e-value: 0.0034
score: 17.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 235..268
e-value: 5.0E-9
score: 33.8
coord: 200..233
e-value: 1.1E-7
score: 29.6
coord: 269..303
e-value: 1.3E-10
score: 38.8
coord: 339..371
e-value: 0.0013
score: 16.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 266..313
e-value: 2.3E-12
score: 46.9
coord: 197..245
e-value: 6.4E-13
score: 48.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 12.912469
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 337..371
score: 10.073492
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 10.928473
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 12.879585
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 7..399
NoneNo IPR availablePANTHERPTHR47932:SF29SUBFAMILY NOT NAMEDcoord: 7..399

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G006840.1CmoCh09G006840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding