CmoCh09G002230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G002230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	THO complex, subunit
Location	Cmo_Chr09: 1038253 .. 1043163 (-)
RNA-Seq Expression	CmoCh09G002230
Synteny	CmoCh09G002230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTAATTTTCAATAACTACATTTATATGACTAAACAACAATAATCCGCCCGACCGGCAGCCGATCGCCCCGTCGCGCCATTTTCTAGGTCGATAACCAAGCCGCTTTCTCATTCTGCTGCTACAAACTTGGATTCAGCCTCCATCAAAGCTCGGACCAGAGCATAGCGGGTGACTCTGACCGAATCAGGCGGCCAACAATCTACAGATATGAACGAGAAGATAGAGGGAATGCTCATAGAAGACGAGACCGAGCCCCCGCCGCCGGACAGCGATACGGGCAAAATGTCTCCCTACGAAATGCTGCGAGAGAGTAAAAGTTCTGTGGAGGAGATCGTCGCCAAGATGCTCTCTATCAAGAAGCAAGGCGAGCCTAAAACTCAGCTCGGAGAACTCGTTACGCAGATGCTCCTTCACTTCGTAACGCTTCGCCAGGTTCTTATTTCTATCCGCTTTCTCTTTTAGGGTTGTAGGTTATTTTCAAGATTCATTGGTTCGAAATGGTCTTTTTTTTTTTTCCTTGCTAATTTGCCATGCGGCGCCACGAACTACAATTATACTGTTGTAGATTTCAATTTTAAATTGCAGCCATTGATGACTCTCGTGGCATAATGTCTGTTCACAGGCCAACCGCTCTATTTTGCTGGAAGAGGACCGAGTGAAAGCTGAAACAGAGAGAGCAAAAGCTCCAGTTGACTTCACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAGGCCTGTAAAGACTTCAAATCAAAGTATTCTGATAGTGAACTTGTGTCTGAGGATGAGTTTTTCCGGGATGCACCCGAAGACATTAAGAATTCCATAAGGTCAAAGGACAGCGCGCATAATCTGATGCTGCAGAGGCTTCACTTCGAGCTTTTCCAGGTGATCTTTAGTTGTCGTTCATACTCTCTTTGAATTAATTAGCACGGATGCAGAATTTTTCTGGTAATTAAAGCTACCAATAACTCGGTTAGGACGGACAAAAGCAATAGCTTCAAGTTATATACAAAATTTTGAGGAGGCATCACCTTCCTCTTGGTCGATTCTGTGGTTCTAAAAAAAAATTGGTGACTCCATTGGCTTTTACTACTATTTTTAAGAATTGCGGGAAATATAGCATCTTGTGCGTCCTTAACTACTTGCATAAGACATCCTAAACATTAAAATTTGAATTATGACGTCAAATTCACCTCGTAACTGAGCTTAAATCTTTCCCTTTTTAGAATGGGTGAATCTATGATGTTTTCCATGTTTTTGGTTTTTATTTGAATGTTCCAATTTTCCACCTTTTGGTCGTGGATGTACATAGTTGATTCTTTTTTAGTGATTTTTTTCATTGTTGCTGTTGAGTGTATTAATAATATCCATCATTTTACCAGCGCAAAGAACTTCGCAAACGGCGAGATGAACTTGAACAACATAAGAAAAGCCTTCTTGAAGTTATTGCTAATAGAAAGAAATTCATGTCAAGTCTTCCCTCACACCTCAAGTCCTTGAAAAAGGCTTCCTTGCCTGTACAGAATCAGTTGGGAATATTGCAGACAAAGAAATTAAAGCAACACCAACTAGCAGAGCTGCTTCCACCTCCTCTTTATGTAATCTACTCACAATTCTTGGCACAAAAGGAAGCATTTAATGAAAGCATTGAGTTGGAGATAGTAGGAATTGTCAAAGATGCTCAAGCTTTTGCACGCCATCAAGCAAACGAGGAAACTGGTACCTGGGTGTATATCTTCTCTCGACCATTAGTTGAATAGTTATATCATATATGATAGTATTTTTATTGTCAGATTGTTTTAATTTTAGATAGTAGGATTGGATGCATATGCTACAAAATGACTTCTTTTTAAATCATCTTATCACGTAATACCCTATACATACGAATTGAATTTATTATTCATTGAAATCATCACACAATTCTAAATCCCGGACCATATTTATCTTATAAATAATGTCAATTTGGAGATAACTGAACACTACTTTTTTTGGATTGCAGAGTCTATATCAAAAACAGCATTCACAGATAACTCTTTCTTCATTTGTTTTTTTCTTTTTTTTTCCTGTAAGAGAGTAATTCTTTCATTGCAAATATTTTAGGTGCATCAACCAATGCTGAGAACTCCAAATTGGAGGATGATGCCCCTGACGAAGATGATGATGGCCAAAGGAGGAAAAAACGGCCAAAGAAGATTCCAGCTAAGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCGCTAAAGATCATCCTACATATATATGACAATGAAACCTGTGACAAGTCAATGAAATTGCTTTCTGTGAAGTTTGAATGCCTGTTAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGGACCTGAGAATAACATCTTATGCAGCTTGTTCCCTGATGACACTGGCCTTGAGCTGCCTCACCAGGTATGAATTCAGAAATTTGCGTTTATGTTCTTATTGTTCTGCCCCAACTTTACATTTTCAACGAAAAAGAGGGGGAAGCCTTGATGATATATTATTTTGTCTTAAATGATGCAGTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTGACAAGAGAACCTCTCGACCATATAAGTGGGCCCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCACCCCTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATGTTGTATCAGGCCTCTCAATGTATCGTCAGCAAATCCGAATACAGACAGTTGTGCAAAGATTACGCTCTCAGAAAAAGGCTCAGCTTGCTCTTGTGTGAGTCATTGATTTGTATTCAAAGTTTTAGATTATAAATGGCTTTGAAGACTGATAGAAGATGGATTTGTAGCATAGTGATCAAATTGAACATCTGTTGTTTCTCTGATCACTTGCAATTTCATGCACTATGCTTGTGTGATTAACACTTTATTTTCTCCAGAAAACTATATATGCCATGTTTACTTTTACTTCTACAGCATTTTATATAATGGAATATTTTTCCGTTGATGGAAGGATCACTGATTCAGCCAAGTATGGTTTGGTTTGTGTTGAGAAATTGGGATTTTTCTACTGACTAACAGGGAACAGCTTGATTCACTTGAAAAACTTAAATGGTCAGTTCTGACATGTTATGATGTCTCATGGGTTTGGCATCAACCTTCATGCTGTTTGTAAGGTTGGTCGCTCGTAGGTTACCCTACTAGTCAGTCATCATCTTTGACTACAATGGAGAGAGAGAAATTTCAGGATCCTGTAGATGTTATGTTTGAAAAATCTGGCATTTCGAGAGAGGAGATCAACGGTGCTAGGGAAGATGGGAAACTTCCTGCTCTAGTTTCATCGACATCTGTCTTTAACAATACTCAAGTTACTCCCCCCTTGAGAACACCCAACCTCGAGCATTCCAAACAGTTGACTTTAATTTCCAAAAGCATTACACCTCAAACCAATTACTCTAGGATACTAAGTTTCAATAAACTGATGAAGATTATGAGTTGATGCAAGATCTCAACAGCGATCAGGATGAGCCTGTGCAGACTGAGCTTTCAGCAGATGATGCAGCATCTATTCCCTCCAACTACATAACAAGAAAGACATGGATGGATTATGAGTCCAAGGAAGCCTTGTTATGGCCAGGAACATTGATTCACCTGTCGAAAATCTTAAATTGCAAGACAAGGTAACTTCTTTTTTTTTTTTTTCCCTTTATAAAAATTATGTTATATTGATTTTCTGAATGTTGACATCAATATCGTTTTGGCAGATTAAAGTCAGCATGGAGTACCCTCTTTAGGCCTCCTCTCTTCACTTTGAATCTTTACTCGATGAATTCTGAAGAAAACCATGATGAGAGTGACAACTCTGATTGGTATAATGAACGTCAGATCATGGAAGCTGAGGTAAGGAGGAAAGTCACATGATCTAGAAAGTATATGTGATGGAAAAGGCTCTTTTATGTTGTAGATTTTTTAAATGCACGTAACTAACCAGTACTTTTTCTAAATGGGGTGTATGTGATGACGTACTGACATTTTTATGAATTTGATCCCTTCCGAGCTCGAATACTGGTTGTTGACCTGGTAATATTTCACTTAGTTGATCTGTGTTTTTGGTTTTGTAGGTGAATCTCCGTAAACTTGAGATGCTGCCTCTGGATCAAGAGAACTATATTTTGTCTCATCAAATTTGTTGTCATGCTATGTTGTTTAACTACTGCATCGACGAGGCATCCCTGTTCTCTGAAAGGAGAAATTGTAGTTCTGTCACTGACGTTGGATTATACAAACCTGTTAGTGGTAGTTTGCATGCCAGTACTTGGAGGAAGAGATCGTAGGAAGATGATATCCCGGAAAGATATTGAAGGCTCTCCCGGCTATCCTTGCTAAGAACTTTTAGGATCTTAAAAATATTACTTTAGCACCTCCGGCTGCTGCTGCTCATGGTGGAACAGTTCTAGAAAATCTGCCTGCCTGGAAAATATGAAGAATGTGATAATTTCCTTCTTAGCCAATTTCTTCAGTATTGAAATATTGGTTGATGCAGTGGCCATGGATCGCTACATTACCTGAACCCGATTCTCAGCTATAGGTAGATGATGCGCAACCTCCTTGACCAAATACAAGCTTGAATGTTCAGCCAAACTGATCACTTTGTTCTCGTGCATTTGTGTATATAATGAGAAAGTTCGTTTTCTTTAAATCCCTTTTCTTTGTAATCGAGTTGGGTAATTGAGAGAATTATTACTATATAGCACTGAGGCATAACTTTTCATGTCAAAACTCACAAGGTTGAGTTTCAATTGTATTGATCGACTACCGAGAGAATCATGTTTGTTGATTGACTTCCCCG

mRNA sequence

AAAATTAATTTTCAATAACTACATTTATATGACTAAACAACAATAATCCGCCCGACCGGCAGCCGATCGCCCCGTCGCGCCATTTTCTAGGTCGATAACCAAGCCGCTTTCTCATTCTGCTGCTACAAACTTGGATTCAGCCTCCATCAAAGCTCGGACCAGAGCATAGCGGGTGACTCTGACCGAATCAGGCGGCCAACAATCTACAGATATGAACGAGAAGATAGAGGGAATGCTCATAGAAGACGAGACCGAGCCCCCGCCGCCGGACAGCGATACGGGCAAAATGTCTCCCTACGAAATGCTGCGAGAGAGTAAAAGTTCTGTGGAGGAGATCGTCGCCAAGATGCTCTCTATCAAGAAGCAAGGCGAGCCTAAAACTCAGCTCGGAGAACTCGTTACGCAGATGCTCCTTCACTTCGTAACGCTTCGCCAGGCCAACCGCTCTATTTTGCTGGAAGAGGACCGAGTGAAAGCTGAAACAGAGAGAGCAAAAGCTCCAGTTGACTTCACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAGGCCTGTAAAGACTTCAAATCAAAGTATTCTGATAGTGAACTTGTGTCTGAGGATGAGTTTTTCCGGGATGCACCCGAAGACATTAAGAATTCCATAAGGTCAAAGGACAGCGCGCATAATCTGATGCTGCAGAGGCTTCACTTCGAGCTTTTCCAGCGCAAAGAACTTCGCAAACGGCGAGATGAACTTGAACAACATAAGAAAAGCCTTCTTGAAGTTATTGCTAATAGAAAGAAATTCATGTCAAGTCTTCCCTCACACCTCAAGTCCTTGAAAAAGGCTTCCTTGCCTGTACAGAATCAGTTGGGAATATTGCAGACAAAGAAATTAAAGCAACACCAACTAGCAGAGCTGCTTCCACCTCCTCTTTATGTAATCTACTCACAATTCTTGGCACAAAAGGAAGCATTTAATGAAAGCATTGAGTTGGAGATAGTAGGAATTGTCAAAGATGCTCAAGCTTTTGCACGCCATCAAGCAAACGAGGAAACTGGTGCATCAACCAATGCTGAGAACTCCAAATTGGAGGATGATGCCCCTGACGAAGATGATGATGGCCAAAGGAGGAAAAAACGGCCAAAGAAGATTCCAGCTAAGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCGCTAAAGATCATCCTACATATATATGACAATGAAACCTGTGACAAGTCAATGAAATTGCTTTCTGTGAAGTTTGAATGCCTGTTAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGGACCTGAGAATAACATCTTATGCAGCTTGTTCCCTGATGACACTGGCCTTGAGCTGCCTCACCAGTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTGACAAGAGAACCTCTCGACCATATAAGTGGGCCCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCACCCCTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATGTTGTATCAGGCCTCTCAATGTATCGTCAGCAAATCCGAATACAGACAGTTGTGCAAAGATTACGCTCTCAGAAAAAGGCTCAGCTTGCTCTTGTCGATCAGGATGAGCCTGTGCAGACTGAGCTTTCAGCAGATGATGCAGCATCTATTCCCTCCAACTACATAACAAGAAAGACATGGATGGATTATGAGTCCAAGGAAGCCTTGTTATGGCCAGGAACATTGATTCACCTGTCGAAAATCTTAAATTGCAAGACAAGATTAAAGTCAGCATGGAGTACCCTCTTTAGGCCTCCTCTCTTCACTTTGAATCTTTACTCGATGAATTCTGAAGAAAACCATGATGAGAGTGACAACTCTGATTGGTATAATGAACGTCAGATCATGGAAGCTGAGGTAAGGAGGAAAGTGAATCTCCGTAAACTTGAGATGCTGCCTCTGGATCAAGAGAACTATATTTTGTCTCATCAAATTTGTTGTCATGCTATGTTGTTTAACTACTGCATCGACGAGGCATCCCTGTTCTCTGAAAGGAGAAATTGTAGTTCTGTCACTGACGTTGGATTATACAAACCTGTTAGTGGTAGTTTGCATGCCAGTACTTGGAGGAAGAGATCGTAGGAAGATGATATCCCGGAAAGATATTGAAGGCTCTCCCGGCTATCCTTGCTAAGAACTTTTAGGATCTTAAAAATATTACTTTAGCACCTCCGGCTGCTGCTGCTCATGGTGGAACAGTTCTAGAAAATCTGCCTGCCTGGAAAATATGAAGAATGTGATAATTTCCTTCTTAGCCAATTTCTTCAGTATTGAAATATTGGTTGATGCAGTGGCCATGGATCGCTACATTACCTGAACCCGATTCTCAGCTATAGGTAGATGATGCGCAACCTCCTTGACCAAATACAAGCTTGAATGTTCAGCCAAACTGATCACTTTGTTCTCGTGCATTTGTGTATATAATGAGAAAGTTCGTTTTCTTTAAATCCCTTTTCTTTGTAATCGAGTTGGGTAATTGAGAGAATTATTACTATATAGCACTGAGGCATAACTTTTCATGTCAAAACTCACAAGGTTGAGTTTCAATTGTATTGATCGACTACCGAGAGAATCATGTTTGTTGATTGACTTCCCCG

Coding sequence (CDS)

ATGAACGAGAAGATAGAGGGAATGCTCATAGAAGACGAGACCGAGCCCCCGCCGCCGGACAGCGATACGGGCAAAATGTCTCCCTACGAAATGCTGCGAGAGAGTAAAAGTTCTGTGGAGGAGATCGTCGCCAAGATGCTCTCTATCAAGAAGCAAGGCGAGCCTAAAACTCAGCTCGGAGAACTCGTTACGCAGATGCTCCTTCACTTCGTAACGCTTCGCCAGGCCAACCGCTCTATTTTGCTGGAAGAGGACCGAGTGAAAGCTGAAACAGAGAGAGCAAAAGCTCCAGTTGACTTCACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAGGCCTGTAAAGACTTCAAATCAAAGTATTCTGATAGTGAACTTGTGTCTGAGGATGAGTTTTTCCGGGATGCACCCGAAGACATTAAGAATTCCATAAGGTCAAAGGACAGCGCGCATAATCTGATGCTGCAGAGGCTTCACTTCGAGCTTTTCCAGCGCAAAGAACTTCGCAAACGGCGAGATGAACTTGAACAACATAAGAAAAGCCTTCTTGAAGTTATTGCTAATAGAAAGAAATTCATGTCAAGTCTTCCCTCACACCTCAAGTCCTTGAAAAAGGCTTCCTTGCCTGTACAGAATCAGTTGGGAATATTGCAGACAAAGAAATTAAAGCAACACCAACTAGCAGAGCTGCTTCCACCTCCTCTTTATGTAATCTACTCACAATTCTTGGCACAAAAGGAAGCATTTAATGAAAGCATTGAGTTGGAGATAGTAGGAATTGTCAAAGATGCTCAAGCTTTTGCACGCCATCAAGCAAACGAGGAAACTGGTGCATCAACCAATGCTGAGAACTCCAAATTGGAGGATGATGCCCCTGACGAAGATGATGATGGCCAAAGGAGGAAAAAACGGCCAAAGAAGATTCCAGCTAAGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCGCTAAAGATCATCCTACATATATATGACAATGAAACCTGTGACAAGTCAATGAAATTGCTTTCTGTGAAGTTTGAATGCCTGTTAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGGACCTGAGAATAACATCTTATGCAGCTTGTTCCCTGATGACACTGGCCTTGAGCTGCCTCACCAGTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTGACAAGAGAACCTCTCGACCATATAAGTGGGCCCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCACCCCTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATGTTGTATCAGGCCTCTCAATGTATCGTCAGCAAATCCGAATACAGACAGTTGTGCAAAGATTACGCTCTCAGAAAAAGGCTCAGCTTGCTCTTGTCGATCAGGATGAGCCTGTGCAGACTGAGCTTTCAGCAGATGATGCAGCATCTATTCCCTCCAACTACATAACAAGAAAGACATGGATGGATTATGAGTCCAAGGAAGCCTTGTTATGGCCAGGAACATTGATTCACCTGTCGAAAATCTTAAATTGCAAGACAAGATTAAAGTCAGCATGGAGTACCCTCTTTAGGCCTCCTCTCTTCACTTTGAATCTTTACTCGATGAATTCTGAAGAAAACCATGATGAGAGTGACAACTCTGATTGGTATAATGAACGTCAGATCATGGAAGCTGAGGTAAGGAGGAAAGTGAATCTCCGTAAACTTGAGATGCTGCCTCTGGATCAAGAGAACTATATTTTGTCTCATCAAATTTGTTGTCATGCTATGTTGTTTAACTACTGCATCGACGAGGCATCCCTGTTCTCTGAAAGGAGAAATTGTAGTTCTGTCACTGACGTTGGATTATACAAACCTGTTAGTGGTAGTTTGCATGCCAGTACTTGGAGGAAGAGATCGTAG

Protein sequence

MNEKIEGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQLGELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKRRDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDAPDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCDKSMKLLSVKFECLLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQLALVDQDEPVQTELSADDAASIPSNYITRKTWMDYESKEALLWPGTLIHLSKILNCKTRLKSAWSTLFRPPLFTLNLYSMNSEENHDESDNSDWYNERQIMEAEVRRKVNLRKLEMLPLDQENYILSHQICCHAMLFNYCIDEASLFSERRNCSSVTDVGLYKPVSGSLHASTWRKRS

Homology

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BLAST of CmoCh09G002230 vs. ExPASy Swiss-Prot
Match: F4K4J0 (THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 5.5e-185
Identity = 391/802 (48.75%), Postives = 491/802 (61.22%), Query Frame = 0


Query: 6   EGMLIEDETEPP--------PPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKT 65
           EGM+  DE   P         P  + GK SP E+LRESK+SVEEIVAKMLS+KKQG  K+
Sbjct: 8   EGMVTADEFPTPEVTTIETIQPPREPGK-SPLELLRESKTSVEEIVAKMLSMKKQGNHKS 67

Query: 66  QLGELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVK 125
           ++ EL+TQM L+FV LRQANR+IL EED+VKAETERAKAPVDFTTLQL+NLMYEKSHYVK
Sbjct: 68  EIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEKSHYVK 127

Query: 126 AIKACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELR 185
           AIKAC+DFKSKY D +LV E +FFR APE IK+   S DS+H LM +RL+FEL QRKEL 
Sbjct: 128 AIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFELHQRKELC 187

Query: 186 KRRDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAE 245
           K R  LEQ KKSLLE IA RKKF+SSLP HLKSLKKASLPVQN LGI  TKKLKQH LAE
Sbjct: 188 KHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKLKQHNLAE 247

Query: 246 LLPPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLED 305
           LLPPPLYV+YSQ LAQKEAF ESIELE+VG +KDAQA+AR Q+ +++G S+N E+S+LED
Sbjct: 248 LLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSSNTESSRLED 307

Query: 306 DAPDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKF 365
           D PD+DDDGQRR+KRPKK+ +K   + AG+YQVHPLKI+LHIYD+E  D KS+KL+ +KF
Sbjct: 308 DGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSLKLVILKF 367

Query: 366 ECLLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRP 425
           E LLKLN++CVG EGS +GPE NI C+LFPDD GLE PHQS KL++G+   F + RTSRP
Sbjct: 368 EYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFDENRTSRP 427

Query: 426 YKWAQHLAGIDFLPELPPLVSAQESASGETVRSDV-VSGLSMYRQQIRIQTVVQRLRSQK 485
           YKW QHLAGID    + P++  QE+ + +  +SD  V  LS+YRQQ R+QTV++R+R +K
Sbjct: 428 YKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRK 487

Query: 486 KAQLALVDQ----------------------------DEPVQTELSADDAASIPSNYITR 545
           KA LAL +Q                            D  +  + SA  + S+  N + +
Sbjct: 488 KAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSCSLTLNSVEQ 547

Query: 546 ------------------------------------------------------------ 605
                                                                       
Sbjct: 548 VPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSNQARSRQLAL 607

Query: 606 ------------------------------------------------------KTWMDY 656
                                                                  +W+DY
Sbjct: 608 MTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPEKADNSWVDY 667

[Close]

BLAST of CmoCh09G002230 vs. ExPASy Swiss-Prot
Match: F4HRC1 (THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.3e-138
Identity = 271/461 (58.79%), Postives = 346/461 (75.05%), Query Frame = 0


Query: 23  TGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQLGELVTQMLLHFVTLRQANRSILL 82
           T + SP E+L+++K+SVE I+AKMLSIK+QG PK++  EL+TQM L+F+ LRQANRSIL+
Sbjct: 12  TAEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILI 71

Query: 83  EEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYSDSELVSEDEFFR 142
           EE++V+ ETE AK+PVDFTTL+L+NLMYEKSHY+KA KA +DFKS+Y + +L+SE +FF 
Sbjct: 72  EEEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFS 131

Query: 143 DAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKRRDELEQHKKSLLEVIANRKKFMS 202
           DAPE IK+   S DS+H+LML+RL+FEL QRKEL K R  LEQ KKSLLE  A R KF+S
Sbjct: 132 DAPEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLS 191

Query: 203 SLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFNESIE 262
           SLP HLKSLKKASLPVQ+QL +   KKLK H LAELLPPPLYVIYSQF+A KEAF E+I+
Sbjct: 192 SLPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENID 251

Query: 263 LEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDAPDEDDDGQRRKKRPKKIPAKVNI 322
           +E+ G +KDAQ +AR QA +      N+E+ +LE        D +R++KR K    KV  
Sbjct: 252 VEVSGSLKDAQTYARQQAEQ------NSESLRLEVGV-----DEERQRKRLK----KVGS 311

Query: 323 EHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFECLLKLNIICVGIEGSHEGPENNIL 382
           +  G+YQVHPLK++LH+YD+E  D KS +L+ +KFE LLKLN++CVGIE S +G E NIL
Sbjct: 312 DEGGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNIL 371

Query: 383 CSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQES 442
           C+LFPDD+GLE PHQSAKL++G    F   RTSRPYKWAQHLAGI+ LPE+ P  + +  
Sbjct: 372 CNLFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDK-- 431

Query: 443 ASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQLALV 483
              +   SD   G +       +QTV+QR+RSQKK +L LV
Sbjct: 432 ---DIQYSDTAKGYASASDHRNVQTVLQRIRSQKKTKLTLV 452

[Close]

BLAST of CmoCh09G002230 vs. ExPASy Swiss-Prot
Match: Q13769 (THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 9.2e-39
Identity = 132/459 (28.76%), Postives = 235/459 (51.20%), Query Frame = 0


Query: 29  YEMLRESKSSVEEIVAKMLSIKKQG--EPKTQLGELVTQMLLHFVTLRQANRSILLEEDR 88
           YE+ + +   ++ ++A++  +K +G  +   ++ E   Q  +HF+TL++ NR   +   +
Sbjct: 52  YELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKK 111

Query: 89  VKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYSDSELVSEDEFFRDAPE 148
            + +T  AK  VD   LQL NL+YE  H  K I  C +FKSK+ + +LVS +EF+++AP 
Sbjct: 112 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPP 171

Query: 149 DIKNSIRSKDSAHNLMLQRLHFELFQRKELRKRRDELEQHKKSLLEVIANRKKFMSSLPS 208
           DI  +  +    H   L RL +EL QRK L ++  E   +K+ +L+ I  +K+++SSL  
Sbjct: 172 DISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQP 231

Query: 209 HLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFNESIELEIV 268
            L S+ +ASLPVQ  L +   +  KQ++ A  LPPPLYV++ Q  A  +A ++++ + I 
Sbjct: 232 RLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIE 291

Query: 269 GIVKDAQAFARHQANEETGASTNAENSKLEDDAPDEDDDGQRRKKRPKKIPAKVNIEHAG 328
           G V +A+A  +   + +            +D++  + ++ Q  K+R   +  +++ +   
Sbjct: 292 GSVDEAKALFKPPEDSQ------------DDESDSDAEEEQTTKRRRPTLGVQLDDKRKE 351

Query: 329 IYQVHPLKIILHIYDNETCDKSMKLLSVKFECLLKLNIICVGIE-------------GSH 388
           + + HPL ++L +     C K   +L + F  L+ LNI+ V  +             G  
Sbjct: 352 MLKRHPLSVMLDL----KC-KDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDL 411

Query: 389 EGPENNILCSLFPDDTGLELPHQSAKLVVGET--LAFSD--KRTSRPYKWAQHLAGIDFL 448
             P++ + C L+P D G + P+ + +    +   L  SD       PY W Q L G+ F 
Sbjct: 412 LSPDSVLSC-LYPGDHGKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFP 471

Query: 449 PELP-PLVSAQESASG-------ETVRSDVVSGLSMYRQ 461
            E P   V A  S S        + +++ V S L++++Q
Sbjct: 472 KEQPQQTVIADHSLSASHMETTMKLLKTRVQSRLALHKQ 492

[Close]

BLAST of CmoCh09G002230 vs. ExPASy Swiss-Prot
Match: Q5ZJK1 (THO complex subunit 5 homolog OS=Gallus gallus OX=9031 GN=THOC5 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.2e-38
Identity = 134/470 (28.51%), Postives = 239/470 (50.85%), Query Frame = 0


Query: 29  YEMLRESKSSVEEIVAKMLSIKKQG--EPKTQLGELVTQMLLHFVTLRQANRSILLEEDR 88
           YE+ +E+   ++ ++A++  +K +G  +  +++ E   Q  +HF+TL++ NR   +   +
Sbjct: 51  YELYKETCQELQRLMAEIQELKSRGVKDNASEIDERRVQSCVHFMTLKKLNRLAHIRLKK 110

Query: 89  VKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYSDSELVSEDEFFRDAPE 148
            + +T  AK  VD   LQL NL+YE  H  K I  C +FKSK+ + ELVS +EF+ +AP 
Sbjct: 111 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSEAPT 170

Query: 149 DIKNSIRSKDSAHNLMLQRLHFELFQRKELRKRRDELEQHKKSLLEVIANRKKFMSSLPS 208
           +I     +    H   L RL +EL QRK L +R  E +  K+ +L+ I  +K+++SSL  
Sbjct: 171 EISRPDITLTEPHQQTLARLDWELEQRKRLAERYKECQTIKEKILKEIEVKKEYLSSLQP 230

Query: 209 HLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFNESIELEIV 268
            L S+ +ASLPVQ  L +   +  KQ++ A  LPPPLYV++ Q  A  +A ++ + + I 
Sbjct: 231 RLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIE 290

Query: 269 GIVKDAQAFARHQANEETGASTNAENSKLEDDAPDEDDDGQRRKKRPKKIPAKVNIEHAG 328
           G V++A+A  +   + +            +D++  + ++ Q  K+R   +  +++ +   
Sbjct: 291 GSVEEAKALYKPPEDSQ------------DDESDSDMEEEQTTKRRRPTLGVQLDDKRKE 350

Query: 329 IYQVHPLKI----------ILHIYDNETCDKS-MKLLSVKFECLLKLNIICVGIE----- 388
           + + HPL +          +LH+      + + M +L + F  L+ LNI+ V  +     
Sbjct: 351 MLKRHPLSVTVDLKCKDENVLHLTFYYLMNLNIMTVLHLTFYYLMNLNIMTVKTKVTTAA 410

Query: 389 --------GSHEGPENNILCSLFPDDTGLELPHQSAKLVVGET--LAFSDKRT--SRPYK 448
                   G    P++ + C L+P D G + P+ + +    +   L  SD  T    PY 
Sbjct: 411 ELTTAISAGDLLSPDSLLSC-LYPGDHGKKTPNPANQFQFDKVGILTLSDYVTELGHPYV 470

Query: 449 WAQHLAGIDFLPELPP-LVSAQESASG-------ETVRSDVVSGLSMYRQ 461
           W Q L G+ F  + P   V+A  S S        + +R+ + S L++++Q
Sbjct: 471 WVQKLGGLHFPKDQPQHTVTADNSLSASHMEMTMKLLRTRLQSRLALHKQ 507

[Close]

BLAST of CmoCh09G002230 vs. ExPASy Swiss-Prot
Match: A4IFQ0 (THO complex subunit 5 homolog OS=Bos taurus OX=9913 GN=THOC5 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.9e-37
Identity = 127/459 (27.67%), Postives = 231/459 (50.33%), Query Frame = 0


Query: 29  YEMLRESKSSVEEIVAKMLSIKKQG--EPKTQLGELVTQMLLHFVTLRQANRSILLEEDR 88
           YE+ + +   ++ ++A++  +K +G  +   ++ +   Q  +HF+TL++ NR   +   +
Sbjct: 52  YELYKYTCQELQRLMAEIQDLKSRGGKDAAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKK 111

Query: 89  VKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYSDSELVSEDEFFRDAPE 148
            + +T  AK  VD   LQL NL+YE  H  K I  C +FKSK+ + +LVS +EF+++AP 
Sbjct: 112 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPP 171

Query: 149 DIKNSIRSKDSAHNLMLQRLHFELFQRKELRKRRDELEQHKKSLLEVIANRKKFMSSLPS 208
           DI  +  +    H   L RL +EL QRK L ++  E   +K+ +L+ I  +K+++SSL  
Sbjct: 172 DISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQP 231

Query: 209 HLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFNESIELEIV 268
            L S  +ASLPVQ  L +   +  KQ++ A  LPPPLYV++ Q  A  +A ++ + + I 
Sbjct: 232 RLNSNMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKMLSVAIE 291

Query: 269 GIVKDAQAFARHQANEETGASTNAENSKLEDDAPDEDDDGQRRKKRPKKIPAKVNIEHAG 328
           G V +A+A  +   + +            +D++  + ++ Q  K+R   +  +++ +   
Sbjct: 292 GSVDEAKALFKPPEDSQ------------DDESDSDAEEEQTTKRRRPTLGVQLDDKRKE 351

Query: 329 IYQVHPLKIILHIYDNETCDKSMKLLSVKFECLLKLNIICVGIE-------------GSH 388
           + + HPL ++L +     C K   +L + F  L+ LNI+ V                G  
Sbjct: 352 MLKRHPLSVLLDL----KC-KDDSVLHLTFYYLMNLNIMTVKARVTTATELITPISAGDL 411

Query: 389 EGPENNILCSLFPDDTGLELPHQSAKLVVGE----TLAFSDKRTSRPYKWAQHLAGIDFL 448
             P++ + C L+P D G + P+ + +    +    TL         PY W Q L G+ F 
Sbjct: 412 LSPDSVLSC-LYPGDHGKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFP 471

Query: 449 PELP--------PLVSAQESASGETVRSDVVSGLSMYRQ 461
            E P         L ++    + + +++ V S L++++Q
Sbjct: 472 KEQPQHTVITDHSLSASHMETTMKLLKTRVQSRLALHKQ 492

[Close]

BLAST of CmoCh09G002230 vs. ExPASy TrEMBL
Match: A0A6J1J206 (THO complex subunit 5B OS=Cucurbita maxima OX=3661 GN=LOC111481103 PE=3 SV=1)

HSP 1 Score: 992.3 bits (2564), Expect = 9.9e-286
Identity = 559/803 (69.61%), Postives = 595/803 (74.10%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDETEPPP +S+TGK+SPYEMLRESKSSVEEIV KMLSIKK GEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLG+LQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG VKDAQAFARHQAN++ GASTN E+SKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETC+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           L KLNIICVGIEGSHEGPENNILC+LFPDDTGLELPHQSAKLVV ETL+FSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSD+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLNIMEKEKVRD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 -----------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDY 656
                                        DQDEP+QTEL+ADD ASIPSN ITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

[Close]

BLAST of CmoCh09G002230 vs. ExPASy TrEMBL
Match: A0A0A0KZS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639830 PE=3 SV=1)

HSP 1 Score: 983.8 bits (2542), Expect = 3.5e-283
Identity = 550/800 (68.75%), Postives = 593/800 (74.12%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDETEP PPDS+TGK+SP+EMLRESKS VE+IV KMLSIKK GE KTQL
Sbjct: 1   MDEEIEEGMLIEDETEPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGESKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEFFRDAPE+IKNS+RSKDSAHNLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSMRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKK LLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKGLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG +KDAQAFARHQAN+ETGAS NAE++KLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGASNNAESNKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPAKVNIEHAGIYQVHPLKIILHIYD+ETC+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDSETCEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           LLKLN+ICVGIEGSHEGPENNILC+LFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK
Sbjct: 361 LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQES SGE VR D+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNPEVRTPNLEHSKQLTLISKSIT 600

Query: 601 --------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDYESK 656
                                     DQD+PVQ EL+ADD AS+PSN IT K W+DY SK
Sbjct: 601 PQTNYSRMLSFNKHDEDYELMIDVDSDQDDPVQAELAADDVASVPSNNITTKKWIDYGSK 660

[Close]

BLAST of CmoCh09G002230 vs. ExPASy TrEMBL
Match: A0A6J1FJR5 (THO complex subunit 5B OS=Cucurbita moschata OX=3662 GN=LOC111445974 PE=3 SV=1)

HSP 1 Score: 983.8 bits (2542), Expect = 3.5e-283
Identity = 555/803 (69.12%), Postives = 592/803 (73.72%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDETEPPP +S+TGK+SPYEMLRESKSSVEEIV KMLSIKK GEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEFF+DAPEDIK SIRSKDSAHNLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFQDAPEDIKKSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLG+LQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG VKDAQAFARHQAN++ GASTN E+SKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETC+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           L KLNIICVGIEGSHEGPENNILC+LFPDDTGLELPHQ AKLVV ETL+FSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQPAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSD+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYAASQESSLTIMEKEKVRD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 -----------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDY 656
                                        DQDEP+QTEL+ADD AS PSN ITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASTPSNDITRKTWMDY 660

[Close]

BLAST of CmoCh09G002230 vs. ExPASy TrEMBL
Match: A0A5A7VBI1 (THO complex subunit 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00890 PE=3 SV=1)

HSP 1 Score: 976.5 bits (2523), Expect = 5.6e-281
Identity = 550/803 (68.49%), Postives = 592/803 (73.72%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDET P PPDS+TGK+SP+EMLRESKS VE+IV KMLSIKK GEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEFFRDAPE+IKNS RSKDSAHNLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG +KDAQAFARHQAN+ETG+S NAE++KLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGSSNNAESNKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNE C+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNEICEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           LLKLN+ICVGIEGSHEGPENNILC+LFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK
Sbjct: 361 LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQES SGE VR D+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNTEVTSLRTPNLEHSKQLTLISK 600

Query: 601 -----------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDY 656
                                        D+D+PVQ EL+ADD AS+PSN ITRK W+DY
Sbjct: 601 SITPQTNYSRMLSFNKHDEDYELMIDVDSDRDDPVQAELAADDVASVPSNDITRKKWIDY 660

[Close]

BLAST of CmoCh09G002230 vs. ExPASy TrEMBL
Match: A0A1S3BTI6 (THO complex subunit 5B OS=Cucumis melo OX=3656 GN=LOC103493544 PE=3 SV=1)

HSP 1 Score: 976.5 bits (2523), Expect = 5.6e-281
Identity = 550/803 (68.49%), Postives = 592/803 (73.72%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDET P PPDS+TGK+SP+EMLRESKS VE+IV KMLSIKK GEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEFFRDAPE+IKNS RSKDSAHNLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG +KDAQAFARHQAN+ETG+S NAE++KLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGSSNNAESNKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNE C+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNEICEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           LLKLN+ICVGIEGSHEGPENNILC+LFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK
Sbjct: 361 LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQES SGE VR D+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNTEVTSLRTPNLEHSKQLTLISK 600

Query: 601 -----------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDY 656
                                        D+D+PVQ EL+ADD AS+PSN ITRK W+DY
Sbjct: 601 SITPQTNYSRMLSFNKHDEDYELMIDVDSDRDDPVQAELAADDVASVPSNDITRKKWIDY 660

[Close]

BLAST of CmoCh09G002230 vs. NCBI nr
Match: KAG6591379.1 (THO complex subunit 5B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1091.3 bits (2821), Expect = 0.0e+00
Identity = 580/655 (88.55%), Postives = 589/655 (89.92%), Query Frame = 0


Query: 1   MNEKIEGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQLG 60
           MNEKIEGMLIEDE+EPPPPDSD+GKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQLG
Sbjct: 1   MNEKIEGMLIEDESEPPPPDSDSGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQLG 60

Query: 61  ELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIK 120
           ELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIK
Sbjct: 61  ELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIK 120

Query: 121 ACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKRR 180
           ACKDFKSKYSDSELVSEDEFFRDAPEDIKNS RSKDSAHNLMLQRLHFELFQRKELRKRR
Sbjct: 121 ACKDFKSKYSDSELVSEDEFFRDAPEDIKNSTRSKDSAHNLMLQRLHFELFQRKELRKRR 180

Query: 181 DELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLP 240
           DELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLP
Sbjct: 181 DELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLP 240

Query: 241 PPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDAP 300
           PPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDAP
Sbjct: 241 PPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDAP 300

Query: 301 DEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCDKSMKLLSVKFECLL 360
           DEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCDKSMKLLSVKFECLL
Sbjct: 301 DEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCDKSMKLLSVKFECLL 360

Query: 361 KLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWA 420
           KLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWA
Sbjct: 361 KLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWA 420

Query: 421 QHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQLA 480
           QHLAGIDFLPELPPLVSAQESASGETVRSD+VSGLSMYRQQIRIQTVVQRLRSQKKAQLA
Sbjct: 421 QHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQIRIQTVVQRLRSQKKAQLA 480

Query: 481 LVDQDEPVQTELSADDAASIPSNYITRKTWMDYESKEALLWPGTLIHLSKILNCKTRLKS 540
           LV+ D PV+                                          L  +  +K 
Sbjct: 481 LVNIDSPVEN-----------------------------------------LKLQDEIKV 540

Query: 541 AWSTLFRPPLFTLNLYSMNSEENHDESDNSDWYNERQIMEAEVRRKVNLRKLEMLPLDQE 600
           +     RPPLFTLNLYSM SEENHDESDNSDWYNERQIMEAE    VNLRKLEMLPLDQE
Sbjct: 541 SMEYPLRPPLFTLNLYSMKSEENHDESDNSDWYNERQIMEAE----VNLRKLEMLPLDQE 600

Query: 601 NYILSHQICCHAMLFNYCIDEASLFSERRNCSSVTDVGLYKPVSGSLHASTWRKR 656
           NYI SHQICC AMLFNYCIDEASLFSERRNCSSVTD+GLYKPVSGSLHA   R R
Sbjct: 601 NYISSHQICCLAMLFNYCIDEASLFSERRNCSSVTDIGLYKPVSGSLHARVLRGR 610

[Close]

BLAST of CmoCh09G002230 vs. NCBI nr
Match: XP_022982205.1 (THO complex subunit 5B [Cucurbita maxima])

HSP 1 Score: 992.3 bits (2564), Expect = 2.0e-285
Identity = 559/803 (69.61%), Postives = 595/803 (74.10%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDETEPPP +S+TGK+SPYEMLRESKSSVEEIV KMLSIKK GEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLG+LQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG VKDAQAFARHQAN++ GASTN E+SKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETC+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           L KLNIICVGIEGSHEGPENNILC+LFPDDTGLELPHQSAKLVV ETL+FSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSD+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLNIMEKEKVRD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 -----------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDY 656
                                        DQDEP+QTEL+ADD ASIPSN ITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

[Close]

BLAST of CmoCh09G002230 vs. NCBI nr
Match: KAG7037799.1 (THO complex subunit 5B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 987.3 bits (2551), Expect = 6.5e-284
Identity = 557/803 (69.36%), Postives = 594/803 (73.97%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDETEPPP +S+TGK+SPYEMLRESKSSVEEIV KMLSIKK GEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEF RDAPEDIKNSIRSKDSAHNLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLG+LQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG VKDAQAFARHQAN++ GASTN E+SKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNETC+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           L KLNIICVGIEGSHEGPENNILC+LFPDDTGLELPHQSAKLVV ETL+FSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSD+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 -----------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDY 656
                                        DQDEP+QTEL+ADD ASIPSN ITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

[Close]

BLAST of CmoCh09G002230 vs. NCBI nr
Match: KAG6608471.1 (THO complex subunit 5B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 984.2 bits (2543), Expect = 5.5e-283
Identity = 556/803 (69.24%), Postives = 593/803 (73.85%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDETEPPP +S+TGK+SPYEMLRESKSSVEEIV KMLSIKK GEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEF RDAPEDIKNSIRSKDSA NLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAQNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLG+LQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG VKDAQAFARHQAN++ GASTN E+SKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNETC+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           L KLNIICVGIEGSHEGPENNILC+LFPDDTGLELPHQSAKLVV ETL+FSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSD+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 -----------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDY 656
                                        DQDEP+QTEL+ADD ASIPSN ITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

[Close]

BLAST of CmoCh09G002230 vs. NCBI nr
Match: XP_004141378.1 (THO complex subunit 5B [Cucumis sativus] >KGN55195.1 hypothetical protein Csa_012617 [Cucumis sativus])

HSP 1 Score: 983.8 bits (2542), Expect = 7.2e-283
Identity = 550/800 (68.75%), Postives = 593/800 (74.12%), Query Frame = 0


Query: 1   MNEKI-EGMLIEDETEPPPPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQL 60
           M+E+I EGMLIEDETEP PPDS+TGK+SP+EMLRESKS VE+IV KMLSIKK GE KTQL
Sbjct: 1   MDEEIEEGMLIEDETEPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGESKTQL 60

Query: 61  GELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
            ELVTQM LHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKR 180
           KACKDFKSKY D ELVSEDEFFRDAPE+IKNS+RSKDSAHNLMLQRL +ELFQRKEL KR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSMRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240
           RDELEQHKK LLEVIANRKKF+SSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKGLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDA 300
           PPPLYVIYSQFLAQKEAF E+IELEIVG +KDAQAFARHQAN+ETGAS NAE++KLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGASNNAESNKLEDDA 300

Query: 301 PDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFEC 360
           PDEDDDGQRR+KRPKKIPAKVNIEHAGIYQVHPLKIILHIYD+ETC+ KSMKLLS+KFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDSETCEPKSMKLLSLKFEC 360

Query: 361 LLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420
           LLKLN+ICVGIEGSHEGPENNILC+LFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK
Sbjct: 361 LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQ 480
           WAQHLAGIDFLPELPPLVSAQES SGE VR D+VSGLSMYRQQ RIQTVVQRLRS+KKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALV-------------------------------------------------------- 540
           LALV                                                        
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD 540

Query: 541 ------------------------------------------------------------ 600
                                                                       
Sbjct: 541 PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNPEVRTPNLEHSKQLTLISKSIT 600

Query: 601 --------------------------DQDEPVQTELSADDAASIPSNYITRKTWMDYESK 656
                                     DQD+PVQ EL+ADD AS+PSN IT K W+DY SK
Sbjct: 601 PQTNYSRMLSFNKHDEDYELMIDVDSDQDDPVQAELAADDVASVPSNNITTKKWIDYGSK 660

[Close]

BLAST of CmoCh09G002230 vs. TAIR 10
Match: AT5G42920.2 (THO complex, subunit 5 )

HSP 1 Score: 649.0 bits (1673), Expect = 3.9e-186
Identity = 391/802 (48.75%), Postives = 491/802 (61.22%), Query Frame = 0


Query: 6   EGMLIEDETEPP--------PPDSDTGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKT 65
           EGM+  DE   P         P  + GK SP E+LRESK+SVEEIVAKMLS+KKQG  K+
Sbjct: 8   EGMVTADEFPTPEVTTIETIQPPREPGK-SPLELLRESKTSVEEIVAKMLSMKKQGNHKS 67

Query: 66  QLGELVTQMLLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVK 125
           ++ EL+TQM L+FV LRQANR+IL EED+VKAETERAKAPVDFTTLQL+NLMYEKSHYVK
Sbjct: 68  EIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEKSHYVK 127

Query: 126 AIKACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELR 185
           AIKAC+DFKSKY D +LV E +FFR APE IK+   S DS+H LM +RL+FEL QRKEL 
Sbjct: 128 AIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFELHQRKELC 187

Query: 186 KRRDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAE 245
           K R  LEQ KKSLLE IA RKKF+SSLP HLKSLKKASLPVQN LGI  TKKLKQH LAE
Sbjct: 188 KHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKLKQHNLAE 247

Query: 246 LLPPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGASTNAENSKLED 305
           LLPPPLYV+YSQ LAQKEAF ESIELE+VG +KDAQA+AR Q+ +++G S+N E+S+LED
Sbjct: 248 LLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSSNTESSRLED 307

Query: 306 DAPDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKF 365
           D PD+DDDGQRR+KRPKK+ +K   + AG+YQVHPLKI+LHIYD+E  D KS+KL+ +KF
Sbjct: 308 DGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSLKLVILKF 367

Query: 366 ECLLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRP 425
           E LLKLN++CVG EGS +GPE NI C+LFPDD GLE PHQS KL++G+   F + RTSRP
Sbjct: 368 EYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFDENRTSRP 427

Query: 426 YKWAQHLAGIDFLPELPPLVSAQESASGETVRSDV-VSGLSMYRQQIRIQTVVQRLRSQK 485
           YKW QHLAGID    + P++  QE+ + +  +SD  V  LS+YRQQ R+QTV++R+R +K
Sbjct: 428 YKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRK 487

Query: 486 KAQLALVDQ----------------------------DEPVQTELSADDAASIPSNYITR 545
           KA LAL +Q                            D  +  + SA  + S+  N + +
Sbjct: 488 KAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSCSLTLNSVEQ 547

Query: 546 ------------------------------------------------------------ 605
                                                                       
Sbjct: 548 VPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSNQARSRQLAL 607

Query: 606 ------------------------------------------------------KTWMDY 656
                                                                  +W+DY
Sbjct: 608 MTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPEKADNSWVDY 667

[Close]

BLAST of CmoCh09G002230 vs. TAIR 10
Match: AT5G42920.1 (THO complex, subunit 5 )

HSP 1 Score: 528.1 bits (1359), Expect = 1.0e-149
Identity = 318/691 (46.02%), Postives = 405/691 (58.61%), Query Frame = 0


Query: 109 MYEKSHYVKAIKACKDFKSKYSDSELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLHF 168
           MYEKSHYVKAIKAC+DFKSKY D +LV E +FFR APE IK+   S DS+H LM +RL+F
Sbjct: 1   MYEKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNF 60

Query: 169 ELFQRKELRKRRDELEQHKKSLLEVIANRKKFMSSLPSHLKSLKKASLPVQNQLGILQTK 228
           EL QRKEL K R  LEQ KKSLLE IA RKKF+SSLP HLKSLKKASLPVQN LGI  TK
Sbjct: 61  ELHQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTK 120

Query: 229 KLKQHQLAELLPPPLYVIYSQFLAQKEAFNESIELEIVGIVKDAQAFARHQANEETGAST 288
           KLKQH LAELLPPPLYV+YSQ LAQKEAF ESIELE+VG +KDAQA+AR Q+ +++G S+
Sbjct: 121 KLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSS 180

Query: 289 NAENSKLEDDAPDEDDDGQRRKKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCD-K 348
           N E+S+LEDD PD+DDDGQRR+KRPKK+ +K   + AG+YQVHPLKI+LHIYD+E  D K
Sbjct: 181 NTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTK 240

Query: 349 SMKLLSVKFECLLKLNIICVGIEGSHEGPENNILCSLFPDDTGLELPHQSAKLVVGETLA 408
           S+KL+ +KFE LLKLN++CVG EGS +GPE NI C+LFPDD GLE PHQS KL++G+   
Sbjct: 241 SLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQT 300

Query: 409 FSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDV-VSGLSMYRQQIRIQT 468
           F + RTSRPYKW QHLAGID    + P++  QE+ + +  +SD  V  LS+YRQQ R+QT
Sbjct: 301 FDENRTSRPYKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQT 360

Query: 469 VVQRLRSQKKAQLALVDQ----------------------------DEPVQTELSADDAA 528
           V++R+R +KKA LAL +Q                            D  +  + SA  + 
Sbjct: 361 VLRRIRLRKKAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSC 420

Query: 529 SIPSNYITR--------------------------------------------------- 588
           S+  N + +                                                   
Sbjct: 421 SLTLNSVEQVPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSN 480

Query: 589 ------------------------------------------------------------ 648
                                                                       
Sbjct: 481 QARSRQLALMTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPE 540

Query: 649 ---KTWMDYESKEALLWPGTLIHLSKILNCKTRLKSAWSTLFRPPLFTLNLYSMNSEENH 656
               +W+DY S+E  L         K+   +  ++ +     RPPLF+L+L++ +S  N 
Sbjct: 541 KADNSWVDYGSREFALVFSRKTDGGKLWKLEAMVQISMEYPLRPPLFSLSLHASSSSGNE 600

[Close]

BLAST of CmoCh09G002230 vs. TAIR 10
Match: AT1G45233.2 (THO complex, subunit 5 )

HSP 1 Score: 495.0 bits (1273), Expect = 9.5e-140
Identity = 271/461 (58.79%), Postives = 346/461 (75.05%), Query Frame = 0


Query: 23  TGKMSPYEMLRESKSSVEEIVAKMLSIKKQGEPKTQLGELVTQMLLHFVTLRQANRSILL 82
           T + SP E+L+++K+SVE I+AKMLSIK+QG PK++  EL+TQM L+F+ LRQANRSIL+
Sbjct: 12  TAEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILI 71

Query: 83  EEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYSDSELVSEDEFFR 142
           EE++V+ ETE AK+PVDFTTL+L+NLMYEKSHY+KA KA +DFKS+Y + +L+SE +FF 
Sbjct: 72  EEEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFS 131

Query: 143 DAPEDIKNSIRSKDSAHNLMLQRLHFELFQRKELRKRRDELEQHKKSLLEVIANRKKFMS 202
           DAPE IK+   S DS+H+LML+RL+FEL QRKEL K R  LEQ KKSLLE  A R KF+S
Sbjct: 132 DAPEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLS 191

Query: 203 SLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFNESIE 262
           SLP HLKSLKKASLPVQ+QL +   KKLK H LAELLPPPLYVIYSQF+A KEAF E+I+
Sbjct: 192 SLPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENID 251

Query: 263 LEIVGIVKDAQAFARHQANEETGASTNAENSKLEDDAPDEDDDGQRRKKRPKKIPAKVNI 322
           +E+ G +KDAQ +AR QA +      N+E+ +LE        D +R++KR K    KV  
Sbjct: 252 VEVSGSLKDAQTYARQQAEQ------NSESLRLEVGV-----DEERQRKRLK----KVGS 311

Query: 323 EHAGIYQVHPLKIILHIYDNETCD-KSMKLLSVKFECLLKLNIICVGIEGSHEGPENNIL 382
           +  G+YQVHPLK++LH+YD+E  D KS +L+ +KFE LLKLN++CVGIE S +G E NIL
Sbjct: 312 DEGGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNIL 371

Query: 383 CSLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQES 442
           C+LFPDD+GLE PHQSAKL++G    F   RTSRPYKWAQHLAGI+ LPE+ P  + +  
Sbjct: 372 CNLFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDK-- 431

Query: 443 ASGETVRSDVVSGLSMYRQQIRIQTVVQRLRSQKKAQLALV 483
              +   SD   G +       +QTV+QR+RSQKK +L LV
Sbjct: 432 ---DIQYSDTAKGYASASDHRNVQTVLQRIRSQKKTKLTLV 452

The following BLAST results are available for this feature:

BLAST of CmoCh09G002230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K4J0	5.5e-185	48.75	THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1	[more]
F4HRC1	1.3e-138	58.79	THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1	[more]
Q13769	9.2e-39	28.76	THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2	[more]
Q5ZJK1	1.2e-38	28.51	THO complex subunit 5 homolog OS=Gallus gallus OX=9031 GN=THOC5 PE=2 SV=1	[more]
A4IFQ0	3.9e-37	27.67	THO complex subunit 5 homolog OS=Bos taurus OX=9913 GN=THOC5 PE=2 SV=1	[more]

BLAST of CmoCh09G002230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J206	9.9e-286	69.61	THO complex subunit 5B OS=Cucurbita maxima OX=3661 GN=LOC111481103 PE=3 SV=1	[more]
A0A0A0KZS2	3.5e-283	68.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639830 PE=3 SV=1	[more]
A0A6J1FJR5	3.5e-283	69.12	THO complex subunit 5B OS=Cucurbita moschata OX=3662 GN=LOC111445974 PE=3 SV=1	[more]
A0A5A7VBI1	5.6e-281	68.49	THO complex subunit 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3BTI6	5.6e-281	68.49	THO complex subunit 5B OS=Cucumis melo OX=3656 GN=LOC103493544 PE=3 SV=1	[more]

BLAST of CmoCh09G002230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591379.1	0.0e+00	88.55	THO complex subunit 5B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982205.1	2.0e-285	69.61	THO complex subunit 5B [Cucurbita maxima]	[more]
KAG7037799.1	6.5e-284	69.36	THO complex subunit 5B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608471.1	5.5e-283	69.24	THO complex subunit 5B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004141378.1	7.2e-283	68.75	THO complex subunit 5B [Cucumis sativus] >KGN55195.1 hypothetical protein Csa_01...	[more]

BLAST of CmoCh09G002230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42920.2	3.9e-186	48.75	THO complex, subunit 5	[more]
AT5G42920.1	1.0e-149	46.02	THO complex, subunit 5	[more]
AT1G45233.2	9.5e-140	58.79	THO complex, subunit 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..316
IPR019163	THO complex, subunit 5	PFAM	PF09766	FmiP_Thoc5	coord: 72..428 e-value: 4.5E-102 score: 342.1
IPR019163	THO complex, subunit 5	PANTHER	PTHR13375	FMS INTERACTING PROTEIN	coord: 19..655

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G002230.1	CmoCh09G002230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0032786	positive regulation of DNA-templated transcription, elongation
cellular_component	GO:0000445	THO complex part of transcription export complex
molecular_function	GO:0003729	mRNA binding