CmoCh08G006860 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G006860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor TINY-like
Location	Cmo_Chr08: 4379264 .. 4379908 (+)
RNA-Seq Expression	CmoCh08G006860
Synteny	CmoCh08G006860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGCCAAAGAGCTCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCAGCTGCGTTGTGCATTAAAGGTGACTCGGCTATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATACAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAGTTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCAGCTGTTCTTTCTCCGACCAGTTGGCGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

mRNA sequence

ATGGCGAAGCCAAAGAGCTCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCAGCTGCGTTGTGCATTAAAGGTGACTCGGCTATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATACAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAGTTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCAGCTGTTCTTTCTCCGACCAGTTGGCGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

Coding sequence (CDS)

ATGGCGAAGCCAAAGAGCTCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCAGCTGCGTTGTGCATTAAAGGTGACTCGGCTATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATACAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAGTTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCAGCTGTTCTTTCTCCGACCAGTTGGCGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

Protein sequence

MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAMATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD

Homology

[Close]

BLAST of CmoCh08G006860 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.2e-37
Identity = 91/167 (54.49%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 25  VSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEM 84
           VS    A+      KR RD  +HPV+RGVR R+WGKWVSEIR+PRKKSRIWLGTFPTPEM
Sbjct: 26  VSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEM 85

Query: 85  AARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM----------- 144
           AARAHD AAL IKG +AILN+PELA   PRP SL P DIQ AA KAA M           
Sbjct: 86  AARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTS 145

Query: 145 -ATALPSPS--------------EEEELSEIVELPNIEDDFGTESLN 166
            +++L S S              E EEL EIVELP++   +  +S N
Sbjct: 146 SSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

[Close]

BLAST of CmoCh08G006860 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-37
Identity = 89/168 (52.98%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +K  +D  +HPV+RGVRKR+WGKWVSEIR+PRKKSRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAMATA--------------------- 157
           G SAILN+P+LA   PRP+SL P DIQ AA KAA M T+                     
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 158 ---LPSPSEEEELSEIVELPNIEDDFG--TESLNEFKLVTESWEWWEY 180
                S +  EEL EIVELP++   +   T+  NEF + ++S + W Y
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLWPY 190

[Close]

BLAST of CmoCh08G006860 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 100/205 (48.78%), Postives = 119/205 (58.05%), Query Frame = 0


Query: 11  TPPPLSSSFPSTRPVSGAGPAQPDPPP-----RKRTRDCN--------RHPVFRGVRKRS 70
           +P   SS        +    ++ + PP     RKR RD +        +HPV+RGVR RS
Sbjct: 9   SPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRS 68

Query: 71  WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPAS 130
           WGKWVSEIRQPRKK+RIWLGTF T +MAARAHD AAL IKG SA+LN+PELAS  PRPAS
Sbjct: 69  WGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPAS 128

Query: 131 LMPHDIQAAAAKAAAM-----------ATALPSPSE----------EEELSEIVELPNIE 180
             PHDIQ AAA+AAAM           A   P  SE          EE L +IVELPNIE
Sbjct: 129 SSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIE 188

[Close]

BLAST of CmoCh08G006860 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 93/176 (52.84%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +KR R     P +RGVR R+WGKWVSEIR+PRKKSRIWLGTF TPEMAARAHDAAAL IK
Sbjct: 34  KKRVRS---DPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIK 93

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM------------------------ 157
           G SA+LN+PELA++LPRPAS  P D+QAAAA AAAM                        
Sbjct: 94  GTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQ 153

Query: 158 ----------ATALPSPSEE-----EELSEIVELPNIEDDFGTESLNEFKLVTESW 175
                     +++L   SEE     EELSEIVELP++E  +  ESL+EF  V  ++
Sbjct: 154 LSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDSAY 205

[Close]

BLAST of CmoCh08G006860 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.2e-33
Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 34  DPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAA 93
           D    K  ++ N+ PV+RGVR RSWGKWVSEIR+PRKKSRIWLGTFPT EMA RAHD AA
Sbjct: 3   DSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAA 62

Query: 94  LCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM---ATALPSPSEEEE 146
           + IKG SAILN+PEL+  LPRP SL P D++AAA KAA M    TA  S +E  E
Sbjct: 63  MSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSE 117

[Close]

BLAST of CmoCh08G006860 vs. ExPASy TrEMBL
Match: A0A6J1HGN7 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111464158 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYV 180
           HDIQAAAAKAAAMATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYV
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYV 180

Query: 181 AMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           AMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD
Sbjct: 181 AMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 214

[Close]

BLAST of CmoCh08G006860 vs. ExPASy TrEMBL
Match: A0A6J1KJR8 (ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 GN=LOC111494646 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.6e-112
Identity = 207/216 (95.83%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKSS+PTTPPPLSSSFPSTRPV GAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSYPTTPPPLSSSFPSTRPVPGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSA LNYPELAS+LPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSATLNYPELASYLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPS--EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180
           HDIQAAAAKAAAMATALPSPS  EEEELSEIVELPNIEDDFGTESLNEFKLV ESWEWWE
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEEEELSEIVELPNIEDDFGTESLNEFKLVAESWEWWE 180

Query: 181 YVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           YVAMPLAAEF  CSFSDQLAAEDSLFPCSFYGALWD
Sbjct: 181 YVAMPLAAEFDGCSFSDQLAAEDSLFPCSFYGALWD 216

[Close]

BLAST of CmoCh08G006860 vs. ExPASy TrEMBL
Match: A0A6J1D072 (dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 GN=LOC111015808 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82
Identity = 170/220 (77.27%), Postives = 179/220 (81.36%), Query Frame = 0


Query: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+S P T P           VSGAG  QPD P  KR RDCNRHP+FRGVRKRSWGK
Sbjct: 1   MAKPKNSDPQTIP----------AVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAAL IKGDSAILNYPELA FLPRPASL P
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTP 120

Query: 121 HDIQAAAAKAAAM----ATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEW 180
           HDIQAAAAKAAAM    +T+ PSPSEEEELSEIVELPNIEDDF TES +EF LVTESWEW
Sbjct: 121 HDIQAAAAKAAAMVNFKSTSSPSPSEEEELSEIVELPNIEDDFATESQSEFALVTESWEW 180

Query: 181 WEYVAMP--LAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           WE VAMP  LAAEFG   +S+Q  AE++LFP  FYGALWD
Sbjct: 181 WECVAMPLELAAEFGGDFYSNQTTAEENLFPGCFYGALWD 210

[Close]

BLAST of CmoCh08G006860 vs. ExPASy TrEMBL
Match: A0A5D3BW76 (Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002010 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 165/219 (75.34%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 1   MAKPKSSFP---TTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRS 60
           MAKPK+S P   TTP       P+TRP              KR RDCN+HPVFRGVRKRS
Sbjct: 1   MAKPKNSNPQNKTTP------LPTTRPAG------------KRPRDCNKHPVFRGVRKRS 60

Query: 61  WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPAS 120
           WGKWVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPAS
Sbjct: 61  WGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPAS 120

Query: 121 LMPHDIQAAAAKAAAMA--TALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180
           LMP D+QAAAAKAAAM    +   PSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE
Sbjct: 121 LMPQDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180

Query: 181 WWEYVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           WWE VAMPLAAEFG   FS+Q  AE+  +P SFYG LWD
Sbjct: 181 WWESVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of CmoCh08G006860 vs. ExPASy TrEMBL
Match: A0A1S3CGW5 (dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103500606 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 165/219 (75.34%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 1   MAKPKSSFP---TTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRS 60
           MAKPK+S P   TTP       P+TRP              KR RDCN+HPVFRGVRKRS
Sbjct: 1   MAKPKNSNPQNKTTP------LPTTRPAG------------KRPRDCNKHPVFRGVRKRS 60

Query: 61  WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPAS 120
           WGKWVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPAS
Sbjct: 61  WGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPAS 120

Query: 121 LMPHDIQAAAAKAAAMA--TALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180
           LMP D+QAAAAKAAAM    +   PSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE
Sbjct: 121 LMPQDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180

Query: 181 WWEYVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           WWE VAMPLAAEFG   FS+Q  AE+  +P SFYG LWD
Sbjct: 181 WWESVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of CmoCh08G006860 vs. NCBI nr
Match: XP_022964007.1 (ethylene-responsive transcription factor TINY-like [Cucurbita moschata])

HSP 1 Score: 431.4 bits (1108), Expect = 4.5e-117
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYV 180
           HDIQAAAAKAAAMATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYV
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYV 180

Query: 181 AMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           AMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD
Sbjct: 181 AMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 214

[Close]

BLAST of CmoCh08G006860 vs. NCBI nr
Match: XP_023514993.1 (ethylene-responsive transcription factor ERF036-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421.4 bits (1082), Expect = 4.7e-114
Identity = 211/217 (97.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPS---EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWW 180
           HDIQAAAAKAAAMATALPSPS   EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWW
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWW 180

Query: 181 EYVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           EYVAMPLAAEFG CSFSDQ AAEDS+FPCSFYGALWD
Sbjct: 181 EYVAMPLAAEFGGCSFSDQWAAEDSIFPCSFYGALWD 217

[Close]

BLAST of CmoCh08G006860 vs. NCBI nr
Match: KAG6593479.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025823.1 Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 210/215 (97.67%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS FPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPS-EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180
           HDIQAAAAKAAAMATALPSPS EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180

Query: 181 VAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           VAMPLAAEFG CS SDQL AEDSLFPCSFYGALWD
Sbjct: 181 VAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 215

[Close]

BLAST of CmoCh08G006860 vs. NCBI nr
Match: XP_023000389.1 (ethylene-responsive transcription factor TINY-like [Cucurbita maxima])

HSP 1 Score: 414.1 bits (1063), Expect = 7.5e-112
Identity = 207/216 (95.83%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKSS+PTTPPPLSSSFPSTRPV GAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSYPTTPPPLSSSFPSTRPVPGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSA LNYPELAS+LPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSATLNYPELASYLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPS--EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180
           HDIQAAAAKAAAMATALPSPS  EEEELSEIVELPNIEDDFGTESLNEFKLV ESWEWWE
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEEEELSEIVELPNIEDDFGTESLNEFKLVAESWEWWE 180

Query: 181 YVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           YVAMPLAAEF  CSFSDQLAAEDSLFPCSFYGALWD
Sbjct: 181 YVAMPLAAEFDGCSFSDQLAAEDSLFPCSFYGALWD 216

[Close]

BLAST of CmoCh08G006860 vs. NCBI nr
Match: XP_022146662.1 (dehydration-responsive element-binding protein 3 [Momordica charantia])

HSP 1 Score: 315.8 bits (808), Expect = 2.8e-82
Identity = 170/220 (77.27%), Postives = 179/220 (81.36%), Query Frame = 0


Query: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+S P T P           VSGAG  QPD P  KR RDCNRHP+FRGVRKRSWGK
Sbjct: 1   MAKPKNSDPQTIP----------AVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAAL IKGDSAILNYPELA FLPRPASL P
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTP 120

Query: 121 HDIQAAAAKAAAM----ATALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEW 180
           HDIQAAAAKAAAM    +T+ PSPSEEEELSEIVELPNIEDDF TES +EF LVTESWEW
Sbjct: 121 HDIQAAAAKAAAMVNFKSTSSPSPSEEEELSEIVELPNIEDDFATESQSEFALVTESWEW 180

Query: 181 WEYVAMP--LAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 215
           WE VAMP  LAAEFG   +S+Q  AE++LFP  FYGALWD
Sbjct: 181 WECVAMPLELAAEFGGDFYSNQTTAEENLFPGCFYGALWD 210

[Close]

BLAST of CmoCh08G006860 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 91/167 (54.49%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 25  VSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEM 84
           VS    A+      KR RD  +HPV+RGVR R+WGKWVSEIR+PRKKSRIWLGTFPTPEM
Sbjct: 26  VSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEM 85

Query: 85  AARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM----------- 144
           AARAHD AAL IKG +AILN+PELA   PRP SL P DIQ AA KAA M           
Sbjct: 86  AARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTS 145

Query: 145 -ATALPSPS--------------EEEELSEIVELPNIEDDFGTESLN 166
            +++L S S              E EEL EIVELP++   +  +S N
Sbjct: 146 SSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

[Close]

BLAST of CmoCh08G006860 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-38
Identity = 89/168 (52.98%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +K  +D  +HPV+RGVRKR+WGKWVSEIR+PRKKSRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAMATA--------------------- 157
           G SAILN+P+LA   PRP+SL P DIQ AA KAA M T+                     
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 158 ---LPSPSEEEELSEIVELPNIEDDFG--TESLNEFKLVTESWEWWEY 180
                S +  EEL EIVELP++   +   T+  NEF + ++S + W Y
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLWPY 190

[Close]

BLAST of CmoCh08G006860 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 8.4e-37
Identity = 100/205 (48.78%), Postives = 119/205 (58.05%), Query Frame = 0


Query: 11  TPPPLSSSFPSTRPVSGAGPAQPDPPP-----RKRTRDCN--------RHPVFRGVRKRS 70
           +P   SS        +    ++ + PP     RKR RD +        +HPV+RGVR RS
Sbjct: 9   SPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRS 68

Query: 71  WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPAS 130
           WGKWVSEIRQPRKK+RIWLGTF T +MAARAHD AAL IKG SA+LN+PELAS  PRPAS
Sbjct: 69  WGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPAS 128

Query: 131 LMPHDIQAAAAKAAAM-----------ATALPSPSE----------EEELSEIVELPNIE 180
             PHDIQ AAA+AAAM           A   P  SE          EE L +IVELPNIE
Sbjct: 129 SSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIE 188

[Close]

BLAST of CmoCh08G006860 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 93/176 (52.84%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +KR R     P +RGVR R+WGKWVSEIR+PRKKSRIWLGTF TPEMAARAHDAAAL IK
Sbjct: 34  KKRVRS---DPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIK 93

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM------------------------ 157
           G SA+LN+PELA++LPRPAS  P D+QAAAA AAAM                        
Sbjct: 94  GTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQ 153

Query: 158 ----------ATALPSPSEE-----EELSEIVELPNIEDDFGTESLNEFKLVTESW 175
                     +++L   SEE     EELSEIVELP++E  +  ESL+EF  V  ++
Sbjct: 154 LSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDSAY 205

[Close]

BLAST of CmoCh08G006860 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 5.1e-34
Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 34  DPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAA 93
           D    K  ++ N+ PV+RGVR RSWGKWVSEIR+PRKKSRIWLGTFPT EMA RAHD AA
Sbjct: 3   DSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAA 62

Query: 94  LCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM---ATALPSPSEEEE 146
           + IKG SAILN+PEL+  LPRP SL P D++AAA KAA M    TA  S +E  E
Sbjct: 63  MSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSE 117

The following BLAST results are available for this feature:

BLAST of CmoCh08G006860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	2.2e-37	54.49	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	2.8e-37	52.98	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LU18	1.2e-35	48.78	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	2.0e-35	52.84	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	7.2e-33	64.35	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh08G006860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGN7	2.2e-117	100.00	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KJR8	3.6e-112	95.83	ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1D072	1.3e-82	77.27	dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 ...	[more]
A0A5D3BW76	2.1e-80	75.34	Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuw...	[more]
A0A1S3CGW5	2.1e-80	75.34	dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CmoCh08G006860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964007.1	4.5e-117	100.00	ethylene-responsive transcription factor TINY-like [Cucurbita moschata]	[more]
XP_023514993.1	4.7e-114	97.24	ethylene-responsive transcription factor ERF036-like [Cucurbita pepo subsp. pepo...	[more]
KAG6593479.1	1.8e-113	97.67	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
XP_023000389.1	7.5e-112	95.83	ethylene-responsive transcription factor TINY-like [Cucurbita maxima]	[more]
XP_022146662.1	2.8e-82	77.27	dehydration-responsive element-binding protein 3 [Momordica charantia]	[more]

BLAST of CmoCh08G006860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	1.5e-38	54.49	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	2.0e-38	52.98	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	8.4e-37	48.78	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	1.4e-36	52.84	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	5.1e-34	64.35	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 72..88 score: 66.52 coord: 50..61 score: 65.61
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 49..112 e-value: 4.4E-34 score: 129.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 48..98 e-value: 5.9E-15 score: 55.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 49..106 score: 22.721256
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 50..108 e-value: 2.02791E-20 score: 79.2379
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 49..107 e-value: 5.1E-24 score: 86.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 29..151
None	No IPR available	PANTHER	PTHR31985:SF5	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042	coord: 29..151
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 49..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G006860.1	CmoCh08G006860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity