CmoCh08G004540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G004540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Translation initiation factor IF-2
Location	Cmo_Chr08: 2814009 .. 2814497 (-)
RNA-Seq Expression	CmoCh08G004540
Synteny	CmoCh08G004540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGTTTTTCTGCTTGTTTCTCTTTGAATTCTACTCAAGCAGCTAAGCTTCTAGACAGTGATGGAGGTCTGATCGAAAAGGTTAGGCTTCCGGTGAAAGCGGCGGAGCTGATGCTGGAGAGGCCTGGCTATGTCATCTCTTCGGTTGACGTGCTCCGGCGGACTCGCCGGATTTCGGCCTTGAAAGCCGATGATGAGCTTGTGGGTGGTAAAATATATGTGCTGGTGGCTTTAGGGAGAATTGGGTCCAAAGTTTCAGTGGTGGAATTGGAGAATTTGGAGTTGGGCTGCAAGAATAAAGGGAAGAAGATTGGCTCGAAGGTGCTGCCCGCGGCGGCGGCGGAGGAAGGAAAGAAAGAGGATATCGGAAGTGGAATTAGTGGTTCTGATCAATTGAGTTGTGGTCGTGGGAATTATAAGCGATGGAATCCCAATTTGGAATCGATTTCTGAGGACTTTTGCCATTCTTTTAGAGAGAAACATTAG

mRNA sequence

ATGGGGTGTTTTTCTGCTTGTTTCTCTTTGAATTCTACTCAAGCAGCTAAGCTTCTAGACAGTGATGGAGGTCTGATCGAAAAGGTTAGGCTTCCGGTGAAAGCGGCGGAGCTGATGCTGGAGAGGCCTGGCTATGTCATCTCTTCGGTTGACGTGCTCCGGCGGACTCGCCGGATTTCGGCCTTGAAAGCCGATGATGAGCTTGTGGGTGGTAAAATATATGTGCTGGTGGCTTTAGGGAGAATTGGGTCCAAAGTTTCAGTGGTGGAATTGGAGAATTTGGAGTTGGGCTGCAAGAATAAAGGGAAGAAGATTGGCTCGAAGGTGCTGCCCGCGGCGGCGGCGGAGGAAGGAAAGAAAGAGGATATCGGAAGTGGAATTAGTGGTTCTGATCAATTGAGTTGTGGTCGTGGGAATTATAAGCGATGGAATCCCAATTTGGAATCGATTTCTGAGGACTTTTGCCATTCTTTTAGAGAGAAACATTAG

Coding sequence (CDS)

ATGGGGTGTTTTTCTGCTTGTTTCTCTTTGAATTCTACTCAAGCAGCTAAGCTTCTAGACAGTGATGGAGGTCTGATCGAAAAGGTTAGGCTTCCGGTGAAAGCGGCGGAGCTGATGCTGGAGAGGCCTGGCTATGTCATCTCTTCGGTTGACGTGCTCCGGCGGACTCGCCGGATTTCGGCCTTGAAAGCCGATGATGAGCTTGTGGGTGGTAAAATATATGTGCTGGTGGCTTTAGGGAGAATTGGGTCCAAAGTTTCAGTGGTGGAATTGGAGAATTTGGAGTTGGGCTGCAAGAATAAAGGGAAGAAGATTGGCTCGAAGGTGCTGCCCGCGGCGGCGGCGGAGGAAGGAAAGAAAGAGGATATCGGAAGTGGAATTAGTGGTTCTGATCAATTGAGTTGTGGTCGTGGGAATTATAAGCGATGGAATCCCAATTTGGAATCGATTTCTGAGGACTTTTGCCATTCTTTTAGAGAGAAACATTAG

Protein sequence

MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

Homology

[Close]

BLAST of CmoCh08G004540 vs. ExPASy TrEMBL
Match: A0A6J1H9B3 (uncharacterized protein LOC111461238 OS=Cucurbita moschata OX=3662 GN=LOC111461238 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS
Sbjct: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120
           ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK
Sbjct: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120

Query: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
           EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
Sbjct: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 162

[Close]

BLAST of CmoCh08G004540 vs. ExPASy TrEMBL
Match: A0A6J1KXJ6 (uncharacterized protein LOC111498053 OS=Cucurbita maxima OX=3661 GN=LOC111498053 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.3e-82
Identity = 159/162 (98.15%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFSLNSTQ+AKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS
Sbjct: 1   MGCFSACFSLNSTQSAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120
           ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGK+
Sbjct: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKE 120

Query: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
           EDIGSGI+GSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
Sbjct: 121 EDIGSGITGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 162

[Close]

BLAST of CmoCh08G004540 vs. ExPASy TrEMBL
Match: A0A5D3D319 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001640 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.2e-60
Identity = 126/165 (76.36%), Postives = 138/165 (83.64%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFS  ST  AKLLD DGGLI KV+LPVKAAELMLE PG+VIS VDVLRRTRRIS
Sbjct: 1   MGCFSACFSSKSTNTAKLLDIDGGLIGKVKLPVKAAELMLESPGHVISPVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPA---AAAEE 120
           ALKADDELVGGKIYV+VA+GRIGSKVS+ ELEN +L CKN+ KK GSKV PA   AA   
Sbjct: 61  ALKADDELVGGKIYVVVAVGRIGSKVSMAELENFDLTCKNRVKKNGSKVQPAVATAAMVA 120

Query: 121 GKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
            ++E+IG G+ GSDQL+C RGNYKRWNPNLESI EDF  SFREKH
Sbjct: 121 AEEEEIGGGVCGSDQLNCVRGNYKRWNPNLESIYEDFSLSFREKH 165

[Close]

BLAST of CmoCh08G004540 vs. ExPASy TrEMBL
Match: A0A1S3BSD7 (uncharacterized protein LOC103492762 OS=Cucumis melo OX=3656 GN=LOC103492762 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.1e-59
Identity = 126/165 (76.36%), Postives = 138/165 (83.64%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFS  ST  AKLLD DGGLI KV+LPVKAAELMLE PG+VIS VDVLRRTRRIS
Sbjct: 1   MGCFSACFSSKSTNTAKLLDIDGGLIGKVKLPVKAAELMLESPGHVISPVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPA---AAAEE 120
           ALKADDELVGGKIYV+VA+GRIGSKVS+ ELEN +L CKN+ KK GSKV PA   AA   
Sbjct: 61  ALKADDELVGGKIYVVVAVGRIGSKVSMAELENFDLTCKNRVKKNGSKVQPAVATAAMVA 120

Query: 121 GKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
            ++E+IG G+ GSDQL+C RGNYKRWNPNLESI EDF  SFREKH
Sbjct: 121 VEEEEIGGGVCGSDQLNCVRGNYKRWNPNLESIYEDFSLSFREKH 165

[Close]

BLAST of CmoCh08G004540 vs. ExPASy TrEMBL
Match: A0A0A0K830 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407620 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58
Identity = 124/165 (75.15%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFS  ST  AKLLD DGGLI K +LPVKAAELMLE PG+VIS VDVLRRTRRIS
Sbjct: 1   MGCFSACFSSKSTNTAKLLDIDGGLIGKFKLPVKAAELMLESPGHVISPVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPA---AAAEE 120
           ALKADDEL+GGKIYV+VA+GRIGSKVS+ ELEN +L CKN+ KK GSKV PA   AA   
Sbjct: 61  ALKADDELLGGKIYVVVAVGRIGSKVSMAELENFDLTCKNRVKKNGSKVQPAVATAAMVA 120

Query: 121 GKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
            ++E+IG G+ GSDQL+C RGNYKRWNPNLESI EDF  SFREKH
Sbjct: 121 EEEEEIGGGVCGSDQLNCVRGNYKRWNPNLESICEDFSLSFREKH 165

[Close]

BLAST of CmoCh08G004540 vs. NCBI nr
Match: XP_022960525.1 (uncharacterized protein LOC111461238 [Cucurbita moschata])

HSP 1 Score: 318.5 bits (815), Expect = 3.2e-83
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS
Sbjct: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120
           ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK
Sbjct: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120

Query: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
           EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
Sbjct: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 162

[Close]

BLAST of CmoCh08G004540 vs. NCBI nr
Match: KAG6593234.1 (hypothetical protein SDJN03_12710, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS
Sbjct: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120
           ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK
Sbjct: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120

Query: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
           EDIGSG SGSDQLSCGRGNYKRWNPNLESISEDFCHSFRE+H
Sbjct: 121 EDIGSGTSGSDQLSCGRGNYKRWNPNLESISEDFCHSFRERH 162

[Close]

BLAST of CmoCh08G004540 vs. NCBI nr
Match: XP_023004874.1 (uncharacterized protein LOC111498053 [Cucurbita maxima])

HSP 1 Score: 314.7 bits (805), Expect = 4.7e-82
Identity = 159/162 (98.15%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFSLNSTQ+AKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS
Sbjct: 1   MGCFSACFSLNSTQSAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120
           ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGK+
Sbjct: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKE 120

Query: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
           EDIGSGI+GSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
Sbjct: 121 EDIGSGITGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 162

[Close]

BLAST of CmoCh08G004540 vs. NCBI nr
Match: XP_023514542.1 (uncharacterized protein LOC111778799 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.2 bits (783), Expect = 1.7e-79
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS
Sbjct: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120
           ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLP AAAEEGKK
Sbjct: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLP-AAAEEGKK 120

Query: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
           EDIGSGISGSDQLSCGRGN KRWNPNLESISEDFCHSFRE H
Sbjct: 121 EDIGSGISGSDQLSCGRGNCKRWNPNLESISEDFCHSFRELH 161

[Close]

BLAST of CmoCh08G004540 vs. NCBI nr
Match: XP_038899061.1 (uncharacterized protein LOC120086461 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-60
Identity = 130/162 (80.25%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRIS 60
           MGCFSACFSL ST  AKLLD DGGLI KVRLPVKAAELMLERPG VIS VDVLRRTRRIS
Sbjct: 1   MGCFSACFSLKSTNTAKLLDIDGGLIGKVRLPVKAAELMLERPGQVISPVDVLRRTRRIS 60

Query: 61  ALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAAEEGKK 120
           ALKADDELVGGKIYV+VA+GRIGSKVS+ ELEN ELGCKN+ KK GSKV PAAA      
Sbjct: 61  ALKADDELVGGKIYVVVAVGRIGSKVSMTELENFELGCKNRVKKNGSKVQPAAATAATAA 120

Query: 121 EDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH 163
           E+      GSDQLSC RGNYKRWNPNLESISEDF  SFREKH
Sbjct: 121 EE------GSDQLSCVRGNYKRWNPNLESISEDFSLSFREKH 156

[Close]

BLAST of CmoCh08G004540 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 8.1e-08
Identity = 48/165 (29.09%), Postives = 78/165 (47.27%), Query Frame = 0


Query: 1   MGCFSACFSLNSTQA---AKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTR 60
           MG + +C +LN T +   AK++  DGG +  + +P KAAELM+E P Y +     ++  R
Sbjct: 1   MGNYVSC-ALNKTSSSPLAKVILPDGG-VRDIHVPTKAAELMMEMPSYFLVDTKSVKVGR 60

Query: 61  RISALKADDEL-VGG-KIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVLPAAAA 120
           +   L ADD+L +GG  +YV   + R  S  +  ++  L L  K + K  G + +     
Sbjct: 61  KFIPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTGKKRTKNCGHRRVSPENE 120

Query: 121 EEGKKEDIGSGISGSDQLSCGRGNY-------KRWNPNLESISED 154
           +      IG  ++  D        +       K   P LE+I+ED
Sbjct: 121 DNDDVRLIGPKLNLEDIEEFSAAEFIHRISVSKSKKPQLETIAED 163

[Close]

BLAST of CmoCh08G004540 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 6.9e-07
Identity = 44/147 (29.93%), Postives = 68/147 (46.26%), Query Frame = 0


Query: 9   SLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDEL 68
           S +S+ AAK++  DGG +  +  P+KAAELM+E P + +     L+  R+   L ADD+L
Sbjct: 13  SSSSSSAAKVILPDGG-VRNIHAPMKAAELMMEIPSFFLVDAKSLKIGRKFCPLAADDDL 72

Query: 69  --VGGKIYVLVALGRIGSKVSVVELENLELGCKNKGK-KIGSKVLPAAAAEEGKKEDIGS 128
              G  +YV   + R  S  +  +L  L +  K + + ++GS    AA         +  
Sbjct: 73  QIKGCHVYVAFPMTRATSAANASDLARLFVAAKKQRRHRVGSDHSSAAVKHCHNNGRVSP 132

Query: 129 GISGSDQLSCGRGNYKRWNPNLESISE 153
              G D      G+      NLE I E
Sbjct: 133 DGEGDDVKVISAGS----KLNLEDIEE 154

The following BLAST results are available for this feature:

BLAST of CmoCh08G004540 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G004540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9B3	1.6e-83	100.00	uncharacterized protein LOC111461238 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]
A0A6J1KXJ6	2.3e-82	98.15	uncharacterized protein LOC111498053 OS=Cucurbita maxima OX=3661 GN=LOC111498053...	[more]
A0A5D3D319	9.2e-60	76.36	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BSD7	2.1e-59	76.36	uncharacterized protein LOC103492762 OS=Cucumis melo OX=3656 GN=LOC103492762 PE=...	[more]
A0A0A0K830	1.0e-58	75.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407620 PE=4 SV=1	[more]

BLAST of CmoCh08G004540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960525.1	3.2e-83	100.00	uncharacterized protein LOC111461238 [Cucurbita moschata]	[more]
KAG6593234.1	2.7e-82	98.77	hypothetical protein SDJN03_12710, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023004874.1	4.7e-82	98.15	uncharacterized protein LOC111498053 [Cucurbita maxima]	[more]
XP_023514542.1	1.7e-79	98.15	uncharacterized protein LOC111778799 [Cucurbita pepo subsp. pepo]	[more]
XP_038899061.1	2.9e-60	80.25	uncharacterized protein LOC120086461 [Benincasa hispida]	[more]

BLAST of CmoCh08G004540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03280.1	8.1e-08	29.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G17350.1	6.9e-07	29.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..152 e-value: 1.6E-20 score: 74.2
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..153
None	No IPR available	PANTHER	PTHR33052:SF83	OS01G0304400 PROTEIN	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G004540.1	CmoCh08G004540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity