
CmoCh08G004240 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCTCTAAGCTTTTGGTTCCTTTTCTTCTCCTTGCTTTCATCTCATTGTCGTCGATCCCTCTCGCCTGTGCTCAAAAATCTCTCTCCGCCTACGATATTCTCCAGCAGTACGGCTTCCCTGTCGGCATTCTTCCCGTTGGTGTTACTGGCTACGAGTTCAACAAAGCCACCGGAGAGTTCAGCCTCTTTTTGAATCGGAAGTGCAGATTCTGGATCGATTCCTACGAATTGGAGTACAAACCTACCGTCAAAGGCGTGATTTCTCAAGGCGTAATCAAAAATTTGAAAGGTGTTAGTGTTAAGATCTTGTTGATTTGGTTCAACATCGTTGAAGTCGTTAGCGATAGTGACGAACTTCGATTCTCTATCGGAGTTGCCTCTGCTAATTTTCCGATTAATAGTTTCTATGAATCGCCGCAGTGTGGATGTGGATTTGACTGCGACAAGGTTGGGAGCTTGGTTTCGGCTTCTTGAAATTTGGTAATATATGTGTTTAATAATTTATGGAGTGTTTTGTTTTGACGATGTTTTGTTGCTTTGAACTTAAATTTAAGTGCAGTTTAGGTGATCGAGATTTGCTCTATCTATTGTTCTGTTCTACTTTTGTTGAAATAATCGTCTCTTCGGGGGAAAATAGAATTGTATTTTTCTGCCATTGTGATCTGCTGCCTGTCTCTGATTCTCTTGATGCATTCGATTGCTTATTTATGATTTGAACAATTCAATCTATTAGGTTTAATGGTTCCACATTTTTAATCATCTATGGCATCAATCGCATAATCAGTTTGTCTGAAACCCTAGATTCTTATCTTCATCAGTCGGATTCCGTTTACTGGCTTCTTTTTCTTACTCTGCCTACTTTTCAGTTCGTCAATCAGATGATATTCCGCCTTTTTTTCATTGGCAGCCTCTCCCTCAGGTTTCATTTTCTCACTGAGGCCTATTGTTCAATTAGTCAATTATGAGTCAGTTAGATCATATTCCTTTTGTTTTTCCATTGGCAATCGCTTCCTGTCTGTTAGCTAGTTACCAGATCTTGAAAAATATGCCTTGTTGTTGGTCATATTCTGCCTTTGAACTATTTAGTACTCCCACCATAATGGGAGAAGGTACAGTTATAGAATCAATTCTTATCCATCTGGATTGTTCATTTCAAGTTCTTTTAGACCATTGTTTTTTGTTCCTTTTTCACATAATCTGGAACTCCCAGACTGAAAACATACTTTTTGGGATCCTGTTTTTTTTAGAAAGAAAGTCTGACCCCACTCCCAACCCAGATTGTGGAGACATCAGGGGTTTCGATTTGAACAAGCAATTGGGGGTTGATTCTTGGGATCTTGTTAGAGACCCACCACCCCTACCCCTTGGGGGCTGCTTCTTGGGATCTTGTTAGGTGAGGTAAAAGTCTAAGACCACCATATCAGCGTGAAGGATCTGTTCAGGATTGATGAGAGGGACTAATTTAGGGAATAGTCATGGATATATAAGTAAGAATACATCTCCATTGGTACGAGGCCTTTTGGTAAAACAAGAAGCAAAGTCACGAGAGCTTATGCTCAAAGTGTCATACCATTCTAGAGAGACAGGATCTTTGTACATCAGAGTCTACTCTTCGTTTTTAATCATAGATATCATCAAGAAGAGAAGCTCATGTTGGAGTTCAATCTTCAGCCACTGTTTGCACTACCAAATTCTTTTTGCAACATCGCTTTATTTGAATGTCTTGGAAAGTTCATCGAATGGAAACTTGGGGGAATATTGGAACTCAATGTTTGTATGATCTGCTCTTGGAGAATGAGCATTCTATGAGTTGCACGTGTTTGATTAGCATGTCCATAGTTCTCGTAAACCTATTTTTTTGGTGCTACCCTCTATTTCTGTGATCTTAAATTTAGAATCTTCCCAGTCAGCCATAGCATTTCCACATCAATTTTCCAGGAAAATGGTGGGATTAAAATTTTCTCAGCGAGAAAGGGGGAGAGATGGGAGATCCTATTTTTAGAACAACCAAGGAAAAGAAACAACTATTTTTCCCCCCTCAATGGTCTCATTGCCACAGCATTAGCATTAGCCTCAGCCTCAGCCTCCCTTGCCCACATTCTTCCACATCTCCATGTCGACCGCCGCTGCATCGCCTGCCACCAACAACGGCGAAGCACCGTCGGTGTACGACATTCTCCGGGAATTCAACTTCCCAATAGGCCTCCTCCCAGAAGGTGTTGTGGGTTGTAGTCTTGATCGAACCACCGGAAAATTGGAGGCTTATTTGAATGAAGCTTGCCAATTCTCGCCGGAAGATCCATATGAATTGAGATACAAAGCCACCATTAGTGGGCAGATCTCAAAGAATAGGCTAACGGATCTGAAAGGGGTGACTGTTAAATTCATGTTCTTCTGGGTCAACATTGTGGAGGTGGTGAGAAACGGCGACGATCTGCTGTTCTCGGTCGGGGTGGCCACGGCGTCGTTTCCAGTGGATAATTTCTCCGAGTGCCTGCCGCCGGGTGGGTGTGGAGCCGATTGCAAGAATGGAAAAGGGGGGAAAATTAAAACCAAATCTCTTGTTTCACCAGCTTGA ATGAGTTTCTCTAAGCTTTTGGTTCCTTTTCTTCTCCTTGCTTTCATCTCATTGTCGTCGATCCCTCTCGCCTGTGCTCAAAAATCTCTCTCCGCCTACGATATTCTCCAGCAGTACGGCTTCCCTGTCGGCATTCTTCCCGTTGGTGTTACTGGCTACGAGTTCAACAAAGCCACCGGAGAGTTCAGCCTCTTTTTGAATCGGAAGTGCAGATTCTGGATCGATTCCTACGAATTGGAGTACAAACCTACCGTCAAAGGCGTGATTTCTCAAGGCGTAATCAAAAATTTGAAAGGTGTTAGTGTTAAGATCTTGTTGATTTGGTTCAACATCGTTGAAGTCGTTAGCGATAGTGACGAACTTCGATTCTCTATCGGAGTTGCCTCTGCTAATTTTCCGATTAATAGTTTCTATGAATCGCCGCAGTGTGGATGTGGATTTGACTGCGACAAGCCTCAGCCTCAGCCTCCCTTGCCCACATTCTTCCACATCTCCATGTCGACCGCCGCTGCATCGCCTGCCACCAACAACGGCGAAGCACCGTCGGTGTACGACATTCTCCGGGAATTCAACTTCCCAATAGGCCTCCTCCCAGAAGGTGTTGTGGGTTGTAGTCTTGATCGAACCACCGGAAAATTGGAGGCTTATTTGAATGAAGCTTGCCAATTCTCGCCGGAAGATCCATATGAATTGAGATACAAAGCCACCATTAGTGGGCAGATCTCAAAGAATAGGCTAACGGATCTGAAAGGGGTGACTGTTAAATTCATGTTCTTCTGGGTCAACATTGTGGAGGTGGTGAGAAACGGCGACGATCTGCTGTTCTCGGTCGGGGTGGCCACGGCGTCGTTTCCAGTGGATAATTTCTCCGAGTGCCTGCCGCCGGGTGGGTGTGGAGCCGATTGCAAGAATGGAAAAGGGGGGAAAATTAAAACCAAATCTCTTGTTTCACCAGCTTGA ATGAGTTTCTCTAAGCTTTTGGTTCCTTTTCTTCTCCTTGCTTTCATCTCATTGTCGTCGATCCCTCTCGCCTGTGCTCAAAAATCTCTCTCCGCCTACGATATTCTCCAGCAGTACGGCTTCCCTGTCGGCATTCTTCCCGTTGGTGTTACTGGCTACGAGTTCAACAAAGCCACCGGAGAGTTCAGCCTCTTTTTGAATCGGAAGTGCAGATTCTGGATCGATTCCTACGAATTGGAGTACAAACCTACCGTCAAAGGCGTGATTTCTCAAGGCGTAATCAAAAATTTGAAAGGTGTTAGTGTTAAGATCTTGTTGATTTGGTTCAACATCGTTGAAGTCGTTAGCGATAGTGACGAACTTCGATTCTCTATCGGAGTTGCCTCTGCTAATTTTCCGATTAATAGTTTCTATGAATCGCCGCAGTGTGGATGTGGATTTGACTGCGACAAGCCTCAGCCTCAGCCTCCCTTGCCCACATTCTTCCACATCTCCATGTCGACCGCCGCTGCATCGCCTGCCACCAACAACGGCGAAGCACCGTCGGTGTACGACATTCTCCGGGAATTCAACTTCCCAATAGGCCTCCTCCCAGAAGGTGTTGTGGGTTGTAGTCTTGATCGAACCACCGGAAAATTGGAGGCTTATTTGAATGAAGCTTGCCAATTCTCGCCGGAAGATCCATATGAATTGAGATACAAAGCCACCATTAGTGGGCAGATCTCAAAGAATAGGCTAACGGATCTGAAAGGGGTGACTGTTAAATTCATGTTCTTCTGGGTCAACATTGTGGAGGTGGTGAGAAACGGCGACGATCTGCTGTTCTCGGTCGGGGTGGCCACGGCGTCGTTTCCAGTGGATAATTTCTCCGAGTGCCTGCCGCCGGGTGGGTGTGGAGCCGATTGCAAGAATGGAAAAGGGGGGAAAATTAAAACCAAATCTCTTGTTTCACCAGCTTGA MSFSKLLVPFLLLAFISLSSIPLACAQKSLSAYDILQQYGFPVGILPVGVTGYEFNKATGEFSLFLNRKCRFWIDSYELEYKPTVKGVISQGVIKNLKGVSVKILLIWFNIVEVVSDSDELRFSIGVASANFPINSFYESPQCGCGFDCDKPQPQPPLPTFFHISMSTAAASPATNNGEAPSVYDILREFNFPIGLLPEGVVGCSLDRTTGKLEAYLNEACQFSPEDPYELRYKATISGQISKNRLTDLKGVTVKFMFFWVNIVEVVRNGDDLLFSVGVATASFPVDNFSECLPPGGCGADCKNGKGGKIKTKSLVSPA Homology
BLAST of CmoCh08G004240 vs. ExPASy Swiss-Prot
Match: Q9M015 (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.2e-09 Identity = 26/95 (27.37%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of CmoCh08G004240 vs. ExPASy TrEMBL
Match: A0A6J1KX02 (uncharacterized protein LOC111497901 OS=Cucurbita maxima OX=3661 GN=LOC111497901 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 2.4e-83 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CmoCh08G004240 vs. ExPASy TrEMBL
Match: A0A6J1H8I6 (uncharacterized protein LOC111461036 OS=Cucurbita moschata OX=3662 GN=LOC111461036 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 2.4e-83 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CmoCh08G004240 vs. ExPASy TrEMBL
Match: A0A6J1H965 (uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC111460763 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 7.9e-79 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CmoCh08G004240 vs. ExPASy TrEMBL
Match: A0A6J1KXK7 (uncharacterized protein At5g01610-like OS=Cucurbita maxima OX=3661 GN=LOC111498062 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76 Identity = 146/151 (96.69%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of CmoCh08G004240 vs. ExPASy TrEMBL
Match: A0A371H333 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_20056 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75 Identity = 143/305 (46.89%), Postives = 210/305 (68.85%), Query Frame = 0
BLAST of CmoCh08G004240 vs. NCBI nr
Match: KAG7030212.1 (hypothetical protein SDJN02_08559, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 639.8 bits (1649), Expect = 1.2e-179 Identity = 317/319 (99.37%), Postives = 317/319 (99.37%), Query Frame = 0
BLAST of CmoCh08G004240 vs. NCBI nr
Match: KAG7014357.1 (hypothetical protein SDJN02_24534, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 392.9 bits (1008), Expect = 2.7e-105 Identity = 204/319 (63.95%), Postives = 240/319 (75.24%), Query Frame = 0
BLAST of CmoCh08G004240 vs. NCBI nr
Match: XP_022960235.1 (uncharacterized protein LOC111461036 [Cucurbita moschata] >XP_023004679.1 uncharacterized protein LOC111497901 [Cucurbita maxima] >XP_023514716.1 uncharacterized protein LOC111778935 [Cucurbita pepo subsp. pepo] >KAG6593207.1 hypothetical protein SDJN03_12683, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 318.9 bits (816), Expect = 4.9e-83 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CmoCh08G004240 vs. NCBI nr
Match: XP_023522913.1 (uncharacterized protein LOC111786963 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303.9 bits (777), Expect = 1.6e-78 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CmoCh08G004240 vs. NCBI nr
Match: XP_022959809.1 (uncharacterized protein At5g01610-like [Cucurbita moschata] >XP_023514557.1 uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo] >KAG6593208.1 hypothetical protein SDJN03_12684, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 303.9 bits (777), Expect = 1.6e-78 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CmoCh08G004240 vs. TAIR 10
Match: AT4G02360.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 153.7 bits (387), Expect = 2.5e-37 Identity = 71/138 (51.45%), Postives = 92/138 (66.67%), Query Frame = 0
BLAST of CmoCh08G004240 vs. TAIR 10
Match: AT1G02816.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 152.5 bits (384), Expect = 5.6e-37 Identity = 74/148 (50.00%), Postives = 97/148 (65.54%), Query Frame = 0
BLAST of CmoCh08G004240 vs. TAIR 10
Match: AT4G02370.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 148.3 bits (373), Expect = 1.1e-35 Identity = 71/147 (48.30%), Postives = 95/147 (64.63%), Query Frame = 0
BLAST of CmoCh08G004240 vs. TAIR 10
Match: AT1G02813.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 135.6 bits (340), Expect = 7.1e-32 Identity = 66/147 (44.90%), Postives = 91/147 (61.90%), Query Frame = 0
BLAST of CmoCh08G004240 vs. TAIR 10
Match: AT5G19590.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 86.3 bits (212), Expect = 5.0e-17 Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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