CmoCh08G004110 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGCGCCCATTTGGCTTATCCTCTGAGTTAGGGTTTCCGTTTCATCTTCCTTTCTTCCTGATTTTTCTTTAGGGTTTTTCACTTTTTCAGTATCTTCGTGTAATCTCAAGCAATGAGGTAAATTACTGCTCTCTTTTACACTCTGTCAAGCTAGATTGCACTCTGTTCTATGTCATTTTTTATCCGTGATCTTCGTTTGTGTCATTTTTACTTCTCGAACTGTACTGGATCGCTCGAAATGTATGAGATCATTGTAGCTTCGTTGTTGAGTTTATCTGTTGTACTTTGGCCATGGGGAATCGGAGTCATCTTGTAAGTTGTTGTGTTGAAATGGCTTACGAAATGATAATAGTCGTGGGAATTTTATTTTTTTTCTTCCTGTTTTGTTATTGATGTGCTTGTTGGGCTTGGATGGTTTTGGGCTGGAATATCGCGGAGGTTTAATTAGGGTTCTAAATAGTGTTCCTGCGAGTTTTGATTCTTGTGTTAACTATGTTGCCTTTGCTATTTCTTCTCGCGTTCGGCCATTTCTCCATGGATCCTAGGATTATCTGTCAAATCGCATGTATTTGGGTTGAAAAACAAGTTATTTATTGCTATCATATTCTATGCAATTGGTGGGGATGCACATTTGTTTTTAATTTATAGGTTTAATTAGGCTTGTTGTTAAGGTTGTGTTATGGTATAAGTCATTTTAGTAAATTCTTGCAGTATCTTGTTGCCTTTGCGGCTGAATTTAGTTCGAAACCAACGACTTGGCTGGTGGTTCAGTTTTTTGAGTTTGGGGGGCTTTACTTTTTGACGTGCCTTTGGAGACCGATGCAATATTTTTAATACATCTATGGTTACTGTTAACATTTGCTTAATACAATGTAGTCGTCATCCTGAGGTGAAATGGGCCCAGAGATTGGACAAGGTCTTTATCACTGTGCAACTCTCAGACTCGAAGGATTCTAAGGTTAATCTTGAGCCAGATGGAGTCTTCACTTTCTCTGGTAGCGCCGGCTCAGAGAATCACCATTACGAACTGAAGTTGGAGCTTTTTGATAAAGTTAATGTTGAAGTACGTAGACATATTACCTCTTGCTAGAGTCTGCCATAGCTTTCCGATTTAGAGTTTGCTATCGTATGATAAATTGACCTCGTAGTTTACTTGTTTCTCCTTGTAACAGGAAAGTAAAGTTAACATTGGGGTTCGGAGCATATTCTGTATCCTAGAAAAGGCAGAGAAGGGATGGTGGAAAAGGCTATTGCGAGGAGATGGAAAGCCACCCCATTATGTCAAAGTAGATTGGGACAAATGGGTGGATGAGGATGAAGACGATGGTAGTCTAGTCGTGTGCTATGTTTTTGGGTTATCACTATGTATTAAACTTCTCATCCTGTCTGTGAAGCTAATATGTGTTGATTACCTCTTTGGTTGTTCAGGAACAGCTGCTGGTCTAGGTGACTTGGATTTGGGAGGCATGGACTTTTCGGTAAGGATGTGCTATTTGAAGTGATTGCGATGATCTGTATCTCTATTATCTTGTTCTAATCATATTTTATCTTGCAGAAATTTGGTGGCATGGGCGGCATGGATGGTATGGGTGACATGGGTGACATGGGCGACGATAATGACTCCGACGATAGTGATGATGATGGTAAGCTCCCATTTTTCTTTAGCAATGAAGAGTTACTCTGTCTAAAGTCATTGACGATAGTATCTTAAGTAGTTAATAGTAAAGTTAAGAAACGGTCATACGGGCAAATGAATTCTCGTCCACAGTCTTGGGACGACATTTTCACACTTCAAACATTGACTATATGCCTTGTTCGCTATATTTGTAGAACTAGAACAGGAGATGTCGAATCCAGCGAAAAGTGAATCTGCCAAGCCCGAGGCAGAAGTCGCCAAAGAAGGTGGAGTTGGGTCCTCAGAAGGGAAAAAGGAATCTGCAGCAGCAGCTAGCACATGATTTTGCAGGGTTCAAAAATAACCAAGAAGCATTTGATGATGTTTTCATGGTTGTGGCTTGAATTTTTGAGCTTTATGATGATGTTGGCTAATTTCAGTACTCTGGAACTGCTATTTTTCAACTGCTTAAATCTTTGCAATCCAGGAAAAGTATTATTTCACTACTTCATAGATGCATTCAGATGAGTTGGAACTGAGTTATCTGTGGATTTTTTTTTTTTCTCAGTTTATGATATCTGGTAATATGGAGAGATCAATCCATGGTTGGTTTGGGTTGGGTTGGCTGTTTAAATTAGCTGGGAAATAGATCCAAGATTCTTATGAATCAAACTTCTTTGTTTCAACTTTTAACAAATTGCTTGTTGTTTTTTGATGTGATAT AAAGCGCCCATTTGGCTTATCCTCTGAGTTAGGGTTTCCGTTTCATCTTCCTTTCTTCCTGATTTTTCTTTAGGGTTTTTCACTTTTTCAGTATCTTCGTGTAATCTCAAGCAATGAGTCGTCATCCTGAGGTGAAATGGGCCCAGAGATTGGACAAGGTCTTTATCACTGTGCAACTCTCAGACTCGAAGGATTCTAAGGTTAATCTTGAGCCAGATGGAGTCTTCACTTTCTCTGGTAGCGCCGGCTCAGAGAATCACCATTACGAACTGAAGTTGGAGCTTTTTGATAAAGTTAATGTTGAAGAAAGTAAAGTTAACATTGGGGTTCGGAGCATATTCTGTATCCTAGAAAAGGCAGAGAAGGGATGGTGGAAAAGGCTATTGCGAGGAGATGGAAAGCCACCCCATTATGTCAAAGTAGATTGGGACAAATGGGTGGATGAGGATGAAGACGATGGAACAGCTGCTGGTCTAGGTGACTTGGATTTGGGAGGCATGGACTTTTCGAAATTTGGTGGCATGGGCGGCATGGATGGTATGGGTGACATGGGTGACATGGGCGACGATAATGACTCCGACGATAGTGATGATGATGAACTAGAACAGGAGATGTCGAATCCAGCGAAAAGTGAATCTGCCAAGCCCGAGGCAGAAGTCGCCAAAGAAGGTGGAGTTGGGTCCTCAGAAGGGAAAAAGGAATCTGCAGCAGCAGCTAGCACATGATTTTGCAGGGTTCAAAAATAACCAAGAAGCATTTGATGATGTTTTCATGGTTGTGGCTTGAATTTTTGAGCTTTATGATGATGTTGGCTAATTTCAGTACTCTGGAACTGCTATTTTTCAACTGCTTAAATCTTTGCAATCCAGGAAAAGTATTATTTCACTACTTCATAGATGCATTCAGATGAGTTGGAACTGAGTTATCTGTGGATTTTTTTTTTTTCTCAGTTTATGATATCTGGTAATATGGAGAGATCAATCCATGGTTGGTTTGGGTTGGGTTGGCTGTTTAAATTAGCTGGGAAATAGATCCAAGATTCTTATGAATCAAACTTCTTTGTTTCAACTTTTAACAAATTGCTTGTTGTTTTTTGATGTGATAT ATGAGTCGTCATCCTGAGGTGAAATGGGCCCAGAGATTGGACAAGGTCTTTATCACTGTGCAACTCTCAGACTCGAAGGATTCTAAGGTTAATCTTGAGCCAGATGGAGTCTTCACTTTCTCTGGTAGCGCCGGCTCAGAGAATCACCATTACGAACTGAAGTTGGAGCTTTTTGATAAAGTTAATGTTGAAGAAAGTAAAGTTAACATTGGGGTTCGGAGCATATTCTGTATCCTAGAAAAGGCAGAGAAGGGATGGTGGAAAAGGCTATTGCGAGGAGATGGAAAGCCACCCCATTATGTCAAAGTAGATTGGGACAAATGGGTGGATGAGGATGAAGACGATGGAACAGCTGCTGGTCTAGGTGACTTGGATTTGGGAGGCATGGACTTTTCGAAATTTGGTGGCATGGGCGGCATGGATGGTATGGGTGACATGGGTGACATGGGCGACGATAATGACTCCGACGATAGTGATGATGATGAACTAGAACAGGAGATGTCGAATCCAGCGAAAAGTGAATCTGCCAAGCCCGAGGCAGAAGTCGCCAAAGAAGGTGGAGTTGGGTCCTCAGAAGGGAAAAAGGAATCTGCAGCAGCAGCTAGCACATGA MSRHPEVKWAQRLDKVFITVQLSDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDKVNVEESKVNIGVRSIFCILEKAEKGWWKRLLRGDGKPPHYVKVDWDKWVDEDEDDGTAAGLGDLDLGGMDFSKFGGMGGMDGMGDMGDMGDDNDSDDSDDDELEQEMSNPAKSESAKPEAEVAKEGGVGSSEGKKESAAAAST Homology
BLAST of CmoCh08G004110 vs. ExPASy Swiss-Prot
Match: P0C8Z0 (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_027940 PE=1 SV=2) HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53 Identity = 124/225 (55.11%), Postives = 153/225 (68.00%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy Swiss-Prot
Match: Q6YYB0 (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0359500 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.5e-53 Identity = 124/228 (54.39%), Postives = 153/228 (67.11%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy Swiss-Prot
Match: Q8L7U4 (Co-chaperone protein p23-1 OS=Arabidopsis thaliana OX=3702 GN=P23-1 PE=1 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.8e-46 Identity = 110/194 (56.70%), Postives = 132/194 (68.04%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy Swiss-Prot
Match: Q9FR62 (Co-chaperone protein p23-1 OS=Brassica napus OX=3708 GN=P23-1 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.3e-35 Identity = 83/186 (44.62%), Postives = 118/186 (63.44%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy Swiss-Prot
Match: Q6ID70 (Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-28 Identity = 58/114 (50.88%), Postives = 81/114 (71.05%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy TrEMBL
Match: A0A6J1H829 (uncharacterized protein OsI_027940-like OS=Cucurbita moschata OX=3662 GN=LOC111460930 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy TrEMBL
Match: A0A6J1KR22 (uncharacterized protein OsI_027940-like OS=Cucurbita maxima OX=3661 GN=LOC111497888 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100 Identity = 194/202 (96.04%), Postives = 198/202 (98.02%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy TrEMBL
Match: A0A5A7VKQ8 (HSP20-like chaperones superfamily protein isoform 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001950 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 9.1e-89 Identity = 181/206 (87.86%), Postives = 187/206 (90.78%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy TrEMBL
Match: A0A1S3BRT4 (uncharacterized protein OsI_027940 OS=Cucumis melo OX=3656 GN=LOC103492824 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 4.5e-88 Identity = 182/206 (88.35%), Postives = 188/206 (91.26%), Query Frame = 0
BLAST of CmoCh08G004110 vs. ExPASy TrEMBL
Match: A0A6J1D735 (uncharacterized protein OsI_027940 OS=Momordica charantia OX=3673 GN=LOC111017953 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 7.7e-88 Identity = 182/208 (87.50%), Postives = 187/208 (89.90%), Query Frame = 0
BLAST of CmoCh08G004110 vs. NCBI nr
Match: XP_022960075.1 (uncharacterized protein OsI_027940-like [Cucurbita moschata]) HSP 1 Score: 394.8 bits (1013), Expect = 4.4e-106 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CmoCh08G004110 vs. NCBI nr
Match: XP_023514819.1 (uncharacterized protein OsI_027940-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105 Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CmoCh08G004110 vs. NCBI nr
Match: KAG6593192.1 (hypothetical protein SDJN03_12668, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105 Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of CmoCh08G004110 vs. NCBI nr
Match: XP_023004662.1 (uncharacterized protein OsI_027940-like [Cucurbita maxima]) HSP 1 Score: 375.6 bits (963), Expect = 2.8e-100 Identity = 194/202 (96.04%), Postives = 198/202 (98.02%), Query Frame = 0
BLAST of CmoCh08G004110 vs. NCBI nr
Match: KAG7030223.1 (hypothetical protein SDJN02_08570 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 372.9 bits (956), Expect = 1.8e-99 Identity = 200/236 (84.75%), Postives = 201/236 (85.17%), Query Frame = 0
BLAST of CmoCh08G004110 vs. TAIR 10
Match: AT4G02450.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47 Identity = 110/194 (56.70%), Postives = 132/194 (68.04%), Query Frame = 0
BLAST of CmoCh08G004110 vs. TAIR 10
Match: AT4G02450.2 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47 Identity = 110/194 (56.70%), Postives = 132/194 (68.04%), Query Frame = 0
BLAST of CmoCh08G004110 vs. TAIR 10
Match: AT3G03773.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 127.9 bits (320), Expect = 9.4e-30 Identity = 58/114 (50.88%), Postives = 81/114 (71.05%), Query Frame = 0
BLAST of CmoCh08G004110 vs. TAIR 10
Match: AT3G03773.2 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 125.6 bits (314), Expect = 4.7e-29 Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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