CmoCh08G003790 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G003790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Shikimate_dh_N domain-containing protein
Location	Cmo_Chr08: 2356962 .. 2359313 (-)
RNA-Seq Expression	CmoCh08G003790
Synteny	CmoCh08G003790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCACACATCTCCATCCCGCCTGCCATCAACTGGTTGGGATCTCGGAGAATCACAGAAAACAGAACGAAAATGGAGTCTCTGATTTTGGTTCCATCTAGTAGGCACGTTTCAATCACCAATTCTTCTGCGTTTTCCTCCGATTTTAAAGTTCAATTCACTTCTAGAAAGCGCGCCATGAACTTCCGAGCTTCTTCTCCGCAGATTCTCCCTTGCAATGTCGTTCTGGAGCGATTAACTCCGAGGTCTTATATTCGTTACGGGCCACCGTATGGTGATCAAGATGACGATCCTGAAGAGCAGGTTGAAAGCCTCAGGGTTCCTGATGCTTGGTCGGTCCCTTCCAAGGCATTGGAGGTATTGCTTTCCGGTCTTATTGATTTTTTGTTCGATTAGGTCCGTTTTGGAACTTCGTTTTGCAATCTTGAACGTGTTGATTAGCTTTGTTCGTAATAATGGCACATTTTCGATGTTTAGAACTGGTGACTGTGGTGTGTTGACATTGTTATCCATGTGATATTTTAGCAGAAATTTGACATTCTCCTCTAGAATTTGTGTTGCTAAAAATTTCAGTGGGGTGTGTAATGTTCTCCCGCAGTCTCGGGCATTGGCTTATTGTCCAAGCCATGGATATAGTCTGCTAGTGAAGATATCGGAGTTAGTTTCTAAAACTGGCCCGAATTTGATGACTATATCTATGATGCCATAGAATGAATCTTCAAGAGCCACCACACAAGTTTGTTCAGTCACCAGAGTATGTTAAGGGCACGGCTTTTGATGCATTTTTCCGATGAACAATTTTTTTTCAGTAGAATAGAAAATGTGTAACAGCCAAAACAGAAGCACACCGCTTCTACTTAGGGAGAGATTTTCATACCCTTATAAAGAATGTTTCGTTCTCCTCTCTAACCGATGTGGAATCTCACAGTCCACTCCCTTCGGAGCCCAACGTTCTCGTTGACACTCGTTTCCTTCTTTGATTGATGTGGGACCCCCACCAATCCACTCCCCTTCGAAACTCAGCCTCCTTGCAGGCACATAGCGCGGTGCCTTTTGTAACAGCTCAAGCCCACCGCCAGCAGATATTGTTTCTTTGGGCTTTTCCTTTTGGGTTTTCCCTCGAAGTTTTTAAAACGCATATGCTAGGGAGAGGTTTCCACACCTTATAAAGAATGCTTCGTTCTCTTCCCCAACCGATGTGGAATCTCACAAAACGCTTCTACGCTAGATCTTAAATGAATTTTGATGTGTGAGCTGGGAAAGATTTTCCAAGTTGGTATCAATAATATCAGGCCCCAAAGTCAAACATGTCGAGAATACCACTATTTTACATTTGTTTCCATGATCTAAGACAGTTTTTTATCATTCTTCTCCAATAGTTATTGCGAATGAGATTGGAAATCCTTGAAATCTACTTGGTTTTTCAATTTTTTCACTTCATAATTAAATCTACCTTTGTATTTACCTTCTGAAAGTTCTTCCAAATGCTTTAGTTTTTCAATCTTGCAGAAAGCATGTAGCAAGAACAAGTTTGAGAGATCTGAGTTACAGCCTTACTTAGCTCTTTTCAATAATCTTTCAGATCTTTCCTTTATGAATAATCTGTTTAGGTATTTTTCAGGAATCAGAATGGCTTAGGGTTACCCTGCACAAATGGCTGGACGAAGAGTACTGTCCAGAGGAAACTAATGTAGAGATAAGCAAGGTTGCTGCAAAATCGTACTACAATTCTTTGTTAGAGAAGAGGACAGAGCTAGCCGATATTTTATTGAACATGGCAAGAGAATTGGAATCTATTTCATATAAGGAAAGTTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTCAAAGAATAGAGCTGTCTTAACTGTTCATCCCCTTCATTTTTCAAAGTAACTTGCTAATTTATCTCTGACTTTTCTTTCTTATGAGTAGCTCATCTGTTGTCAGATCAGATCTATATTTATGGACAAACAATTCTTGTATTACTCTTCGTTCTTCAATGTCAAAGCAACTTTCTGTGACTGAGTATGGATGTTCTTAAACCAGATCCTGCAAGTTTGGCTCCAAGACCTCAACTCTTGCTCTGAAAGGCATAGCACTTTCAGAAATGCGTTCAAGTGGTGGCTCGAAGGCAAAGCTAGAATTTGTAAGTACTATTAGCTAAGGCATCTATTTGGTCCTTCAAAGATACTCGAGTAGGTTTTTTAAGTCTTTTGAGGAGGATTGAATCTATGATATTTTGATTAATGAGTTGTGGTATGGTTAAGCTAGCACAACCTCGAATTAGAGCACCAATCTTAGGGACGGTAAGTACAACAACAAACTTGGATTGGAG

mRNA sequence

ATCCACACATCTCCATCCCGCCTGCCATCAACTGGTTGGGATCTCGGAGAATCACAGAAAACAGAACGAAAATGGAGTCTCTGATTTTGGTTCCATCTAGTAGGCACGTTTCAATCACCAATTCTTCTGCGTTTTCCTCCGATTTTAAAGTTCAATTCACTTCTAGAAAGCGCGCCATGAACTTCCGAGCTTCTTCTCCGCAGATTCTCCCTTGCAATGTCGTTCTGGAGCGATTAACTCCGAGGTCTTATATTCGTTACGGGCCACCGTATGGTGATCAAGATGACGATCCTGAAGAGCAGGTTGAAAGCCTCAGGGTTCCTGATGCTTGGTCGGTCCCTTCCAAGGCATTGGAGGAATCAGAATGGCTTAGGGTTACCCTGCACAAATGGCTGGACGAAGAGTACTGTCCAGAGGAAACTAATGTAGAGATAAGCAAGGTTGCTGCAAAATCGTACTACAATTCTTTGTTAGAGAAGAGGACAGAGCTAGCCGATATTTTATTGAACATGGCAAGAGAATTGGAATCTATTTCATATAAGGAAAGTTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTCAAAGAATAGAGCTGTCTTAACTGTTCATCCCCTTCATTTTTCAAAATCCTGCAAGTTTGGCTCCAAGACCTCAACTCTTGCTCTGAAAGGCATAGCACTTTCAGAAATGCGTTCAAGTGGTGGCTCGAAGGCAAAGCTAGAATTTGTAAGTACTATTAGCTAAGGCATCTATTTGGTCCTTCAAAGATACTCGAGTAGGTTTTTTAAGTCTTTTGAGGAGGATTGAATCTATGATATTTTGATTAATGAGTTGTGGTATGGTTAAGCTAGCACAACCTCGAATTAGAGCACCAATCTTAGGGACGGTAAGTACAACAACAAACTTGGATTGGAG

Coding sequence (CDS)

ATGGAGTCTCTGATTTTGGTTCCATCTAGTAGGCACGTTTCAATCACCAATTCTTCTGCGTTTTCCTCCGATTTTAAAGTTCAATTCACTTCTAGAAAGCGCGCCATGAACTTCCGAGCTTCTTCTCCGCAGATTCTCCCTTGCAATGTCGTTCTGGAGCGATTAACTCCGAGGTCTTATATTCGTTACGGGCCACCGTATGGTGATCAAGATGACGATCCTGAAGAGCAGGTTGAAAGCCTCAGGGTTCCTGATGCTTGGTCGGTCCCTTCCAAGGCATTGGAGGAATCAGAATGGCTTAGGGTTACCCTGCACAAATGGCTGGACGAAGAGTACTGTCCAGAGGAAACTAATGTAGAGATAAGCAAGGTTGCTGCAAAATCGTACTACAATTCTTTGTTAGAGAAGAGGACAGAGCTAGCCGATATTTTATTGAACATGGCAAGAGAATTGGAATCTATTTCATATAAGGAAAGTTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTCAAAGAATAGAGCTGTCTTAA

Protein sequence

MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSYIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVEISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

Homology

[Close]

BLAST of CmoCh08G003790 vs. ExPASy TrEMBL
Match: A0A6J1H695 (uncharacterized protein LOC111460840 OS=Cucurbita moschata OX=3662 GN=LOC111460840 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60
           MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60

Query: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120
           IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE
Sbjct: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120

Query: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180
           ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL
Sbjct: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmoCh08G003790 vs. ExPASy TrEMBL
Match: A0A6J1KR31 (uncharacterized protein LOC111497897 OS=Cucurbita maxima OX=3661 GN=LOC111497897 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.1e-93
Identity = 178/181 (98.34%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60
           MESLILVPSSRHVSITNSSAFSSDF VQFTSRKR MNFRASSPQILPCNV LERLTPRSY
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFSVQFTSRKRGMNFRASSPQILPCNVFLERLTPRSY 60

Query: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120
           IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE
Sbjct: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120

Query: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180
           ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL
Sbjct: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmoCh08G003790 vs. ExPASy TrEMBL
Match: A0A6J1D9Y8 (uncharacterized protein LOC111018405 OS=Momordica charantia OX=3673 GN=LOC111018405 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.7e-75
Identity = 147/182 (80.77%), Postives = 162/182 (89.01%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLE-RLTPRS 60
           MESLIL+P+SRHVS++NSS F SDF V FT+ KRA+NFRAS PQIL  N +   + TPRS
Sbjct: 1   MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRS 60

Query: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y RYGPPYG++DDDPE QVESLRVPD WSVP+KALEESEWLRVTLHKWLD+EYCPEETNV
Sbjct: 61  YTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEWLRVTLHKWLDDEYCPEETNV 120

Query: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EIS+VAA SYYNSLLEKRT+L DILL MARELESISYKESFHGAF SANAAVNLIAQ+IE
Sbjct: 121 EISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFXSANAAVNLIAQKIE 180

Query: 181 LS 182
           LS
Sbjct: 181 LS 182

[Close]

BLAST of CmoCh08G003790 vs. ExPASy TrEMBL
Match: A0A1S3BS97 (uncharacterized protein LOC103492727 OS=Cucumis melo OX=3656 GN=LOC103492727 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.8e-71
Identity = 145/182 (79.67%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLE-RLTPRS 60
           MESLIL+P S+HVSITNSSAFS  F  QF+SRKRA+NF    PQ L  N     + T RS
Sbjct: 1   MESLILIPPSKHVSITNSSAFSFHFSSQFSSRKRAINFPQFCPQTLHSNGRWHAQTTSRS 60

Query: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           YIR GPPYG++DDDPE +VESLRVPD WSVPSKALEESEWLRVTLHKWLD+EYCPEETNV
Sbjct: 61  YIRNGPPYGEEDDDPELEVESLRVPDEWSVPSKALEESEWLRVTLHKWLDDEYCPEETNV 120

Query: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISKVAA SYYNSLL+K T+L +ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAANSYYNSLLKKTTDLGEILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 182
           LS
Sbjct: 181 LS 182

[Close]

BLAST of CmoCh08G003790 vs. ExPASy TrEMBL
Match: A0A5D3D403 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002040 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.8e-71
Identity = 145/182 (79.67%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLE-RLTPRS 60
           MESLIL+P S+HVSITNSSAFS  F  QF+SRKRA+NF    PQ L  N     + T RS
Sbjct: 1   MESLILIPPSKHVSITNSSAFSFHFSSQFSSRKRAINFPQFCPQTLHSNGRWHAQTTSRS 60

Query: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           YIR GPPYG++DDDPE +VESLRVPD WSVPSKALEESEWLRVTLHKWLD+EYCPEETNV
Sbjct: 61  YIRNGPPYGEEDDDPELEVESLRVPDEWSVPSKALEESEWLRVTLHKWLDDEYCPEETNV 120

Query: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISKVAA SYYNSLL+K T+L +ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAANSYYNSLLKKTTDLGEILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 182
           LS
Sbjct: 181 LS 182

[Close]

BLAST of CmoCh08G003790 vs. NCBI nr
Match: XP_022959936.1 (uncharacterized protein LOC111460840 [Cucurbita moschata] >XP_022959937.1 uncharacterized protein LOC111460840 [Cucurbita moschata])

HSP 1 Score: 355.1 bits (910), Expect = 3.5e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60
           MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60

Query: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120
           IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE
Sbjct: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120

Query: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180
           ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL
Sbjct: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmoCh08G003790 vs. NCBI nr
Match: XP_023515033.1 (uncharacterized protein LOC111779179 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60
           MESLILVPSSRHVSITNSSAFSSDF VQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFSVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60

Query: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120
           IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE
Sbjct: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120

Query: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180
           ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL
Sbjct: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmoCh08G003790 vs. NCBI nr
Match: XP_023004672.1 (uncharacterized protein LOC111497897 [Cucurbita maxima] >XP_023004673.1 uncharacterized protein LOC111497897 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 178/181 (98.34%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60
           MESLILVPSSRHVSITNSSAFSSDF VQFTSRKR MNFRASSPQILPCNV LERLTPRSY
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFSVQFTSRKRGMNFRASSPQILPCNVFLERLTPRSY 60

Query: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120
           IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE
Sbjct: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120

Query: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180
           ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL
Sbjct: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmoCh08G003790 vs. NCBI nr
Match: KAG7025555.1 (hypothetical protein SDJN02_12051 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 176/181 (97.24%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLERLTPRSY 60
           MESLILVPSSRHVSITNSSAFSSDF VQFTSRKRA+NFRASSP ILPCNV L+RLTPRSY
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFSVQFTSRKRAINFRASSPLILPCNVFLDRLTPRSY 60

Query: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120
           IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE
Sbjct: 61  IRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVE 120

Query: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180
           ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL
Sbjct: 121 ISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIEL 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmoCh08G003790 vs. NCBI nr
Match: XP_022150155.1 (uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150156.1 uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150157.1 uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150158.1 uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150159.1 uncharacterized protein LOC111018405 [Momordica charantia])

HSP 1 Score: 289.7 bits (740), Expect = 1.8e-74
Identity = 147/182 (80.77%), Postives = 162/182 (89.01%), Query Frame = 0


Query: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLE-RLTPRS 60
           MESLIL+P+SRHVS++NSS F SDF V FT+ KRA+NFRAS PQIL  N +   + TPRS
Sbjct: 1   MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRS 60

Query: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y RYGPPYG++DDDPE QVESLRVPD WSVP+KALEESEWLRVTLHKWLD+EYCPEETNV
Sbjct: 61  YTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEWLRVTLHKWLDDEYCPEETNV 120

Query: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EIS+VAA SYYNSLLEKRT+L DILL MARELESISYKESFHGAF SANAAVNLIAQ+IE
Sbjct: 121 EISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFXSANAAVNLIAQKIE 180

Query: 181 LS 182
           LS
Sbjct: 181 LS 182

[Close]

BLAST of CmoCh08G003790 vs. TAIR 10
Match: AT4G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 164.5 bits (415), Expect = 8.1e-41
Identity = 92/178 (51.69%), Postives = 124/178 (69.66%), Query Frame = 0


Query: 7   VPSSRHVSITNSSAFSSDFK---VQF--TSRKRAMNFRASSPQILPCNVVLERLTPRSYI 66
           V  S  +S+T    F +  +   V F  T R+R+++F  +S    P    L+    +S I
Sbjct: 13  VVKSHPLSLTKHLDFPATIRRRSVSFPATIRRRSVSFPITSAPKFPS---LKLQKSQSSI 72

Query: 67  RYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVEI 126
             G      ++D E  V++L +P+ W +PS+A+EESEWLRVTLHKWLD+EYCPE TNVEI
Sbjct: 73  HEG------EEDSESAVQALTIPEEWLLPSRAIEESEWLRVTLHKWLDDEYCPEPTNVEI 132

Query: 127 SKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           S+VAAKSYY+SLLEK +++ +ILL MA++L SISY+ESFHGAF+SANAA+NLI  RIE
Sbjct: 133 SEVAAKSYYSSLLEKESDMGEILLKMAQDLTSISYQESFHGAFTSANAAINLIVDRIE 181

The following BLAST results are available for this feature:

BLAST of CmoCh08G003790 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G003790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H695	1.7e-94	100.00	uncharacterized protein LOC111460840 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A6J1KR31	7.1e-93	98.34	uncharacterized protein LOC111497897 OS=Cucurbita maxima OX=3661 GN=LOC111497897...	[more]
A0A6J1D9Y8	8.7e-75	80.77	uncharacterized protein LOC111018405 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A1S3BS97	5.8e-71	79.67	uncharacterized protein LOC103492727 OS=Cucumis melo OX=3656 GN=LOC103492727 PE=...	[more]
A0A5D3D403	5.8e-71	79.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmoCh08G003790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959936.1	3.5e-94	100.00	uncharacterized protein LOC111460840 [Cucurbita moschata] >XP_022959937.1 unchar...	[more]
XP_023515033.1	1.3e-93	99.45	uncharacterized protein LOC111779179 [Cucurbita pepo subsp. pepo]	[more]
XP_023004672.1	1.5e-92	98.34	uncharacterized protein LOC111497897 [Cucurbita maxima] >XP_023004673.1 uncharac...	[more]
KAG7025555.1	2.1e-91	97.24	hypothetical protein SDJN02_12051 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022150155.1	1.8e-74	80.77	uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150156.1 uncha...	[more]

BLAST of CmoCh08G003790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03150.1	8.1e-41	51.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36776	EXPRESSED PROTEIN	coord: 7..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G003790.1	CmoCh08G003790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003855	3-dehydroquinate dehydratase activity
molecular_function	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity