CmoCh08G001890 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G001890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	serine/threonine-protein kinase pakD isoform X1
Location	Cmo_Chr08: 1105441 .. 1107052 (-)
RNA-Seq Expression	CmoCh08G001890
Synteny	CmoCh08G001890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGGAGTGTGTGTGGTTATTCAAAACTCACCACCTCTTGTTCATGCCTGAACCAAACGCCTCTAATCCAAGGTGCATTTCTCTCTCTCTTTCTTTCTTGAAGTTAAGGGTTTATACCCAAATTTAATGATGTGGGTTACTTCTTTTCTGGGTTTTAAAGCTTATGCCTATTCAAATTTCATGGCTTCCTCTCTCTCTCTCTAGAAATTGTGTCAAATTTAAGATGATCAATGGTTTTCTTTGTGGGTTTTTTACCTCATGCCTTTCTCTCTCTACAAATTGGGTAAAATTTAAGGTTTTGTTCGTGGGTTATGTAAGACGAACACGACTCTCCACAACGGTATGATATTGTCCCCTTTGAACATTAGCTCTCATGGCTTTGCTTTCAGTTTTCTGAAAAGTCGATTGAGATCTATTCCTTATTTATAAATCTATGATCATTCTCTAAATTAGGGAGGTAGACGTTCATCTTCCTAATTAGTTTTTTTTAACCCTATGGCTTTCTCTCTCTAGAAATTGTGTAAAATTGAAAGCAATTGAATGTTTTTCTTGGTGGGTTTTTACCTCATGGCTCTCTCTCTCTAGAAATGGTGTAAAATTGAAGGCAATGAGTGTTTTTCTTTGTGGGTTTTTACCTCATGCCTCTCTCTCTCTCTCTCTAGAAATTTGTGTAAAATTGAAGGTGGAAGTAGAATTGGGCCATTAAGACTTTTGGGTTTGGGCTTAAATGCTTGGCCCATTTAAACATATTACGAACACGACGATCGAAGTAGATATCCATTAGAATATCTCCTTGAATTAGTTCTCAAAGAACGACATTCAAATATCAACTTTTTTTTTTTTTTTTTTATATGTTCTAAGGGTAGTTTTGAAACATTTATAAATAATAAAAAATGATACGGTTAACGTGAGTAATTTTGAAATGTTTTCGATCGAAACAAACCCGTTTTTGTTTCATCTTTTCTAAATTTGAAATTTTTAACCCAAATTGTGCACCATTTTAGGGTTTTAAGAGAAGGGTTTTCCCCAAAAAAGTTGATATCAATGAGTATTATGCATGATATGAAATGGGTACTCCTCCACAGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTAGGAACCCAATGGAGAACAACATCTTCAAAACCAAGAGATCAATACCCAATTCCATCACCAAATGGAGCATTCAATTCCAACAACAACAACAAAATGAGAAAATGCACTTCTCTCAAGATAGCAACTTCCTTCACAAGAGTATGTCTTTGTGCACCCATCTCTTCTTACAATGAAATCTTCCAACAAGCTGATATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCCAAGCCTTTTCCTACTACTACTACTAATAACATCGTTCTTCCAACTCCTCGACTTAGCGGTGAGAATAGTCGACGGGTTTTCCGGGGAAAGTCCCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTGGAAGAAGAGGCTATGATGCAAGTTAGGAGAAGAAACCAAATGGAAGTTATAAGGAAGAGGAATTTGATGAGAAGGAAGAAGCTTGGTCCAAGCCCTCTTAGCAAAATGGTTATAGCTGAGGAATAACAATGACAT

mRNA sequence

TCTTGGAGTGTGTGTGGTTATTCAAAACTCACCACCTCTTGTTCATGCCTGAACCAAACGCCTCTAATCCAAGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTAGGAACCCAATGGAGAACAACATCTTCAAAACCAAGAGATCAATACCCAATTCCATCACCAAATGGAGCATTCAATTCCAACAACAACAACAAAATGAGAAAATGCACTTCTCTCAAGATAGCAACTTCCTTCACAAGAGTATGTCTTTGTGCACCCATCTCTTCTTACAATGAAATCTTCCAACAAGCTGATATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCCAAGCCTTTTCCTACTACTACTACTAATAACATCGTTCTTCCAACTCCTCGACTTAGCGGTGAGAATAGTCGACGGGTTTTCCGGGGAAAGTCCCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTGGAAGAAGAGGCTATGATGCAAGTTAGGAGAAGAAACCAAATGGAAGTTATAAGGAAGAGGAATTTGATGAGAAGGAAGAAGCTTGGTCCAAGCCCTCTTAGCAAAATGGTTATAGCTGAGGAATAACAATGACAT

Coding sequence (CDS)

ATGCCTGAACCAAACGCCTCTAATCCAAGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTAGGAACCCAATGGAGAACAACATCTTCAAAACCAAGAGATCAATACCCAATTCCATCACCAAATGGAGCATTCAATTCCAACAACAACAACAAAATGAGAAAATGCACTTCTCTCAAGATAGCAACTTCCTTCACAAGAGTATGTCTTTGTGCACCCATCTCTTCTTACAATGAAATCTTCCAACAAGCTGATATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCCAAGCCTTTTCCTACTACTACTACTAATAACATCGTTCTTCCAACTCCTCGACTTAGCGGTGAGAATAGTCGACGGGTTTTCCGGGGAAAGTCCCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTGGAAGAAGAGGCTATGATGCAAGTTAGGAGAAGAAACCAAATGGAAGTTATAAGGAAGAGGAATTTGATGAGAAGGAAGAAGCTTGGTCCAAGCCCTCTTAGCAAAATGGTTATAGCTGAGGAATAA

Protein sequence

MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNNNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE

Homology

[Close]

BLAST of CmoCh08G001890 vs. ExPASy TrEMBL
Match: A0A6J1H871 (uncharacterized protein LOC111461019 OS=Cucurbita moschata OX=3662 GN=LOC111461019 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNNNKMRKCTSLK 60
           MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNNNKMRKCTSLK
Sbjct: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNNNKMRKCTSLK 60

Query: 61  IATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENS 120
           IATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENS
Sbjct: 61  IATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENS 120

Query: 121 RRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAE 180
           RRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAE
Sbjct: 121 RRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of CmoCh08G001890 vs. ExPASy TrEMBL
Match: A0A6J1KR77 (uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.1e-93
Identity = 178/184 (96.74%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNN---NKMRKCT 60
           MPEPNASNPRKPWYQRAMEIVGTQWRTTSSK RDQYPIPSPNGAFNSN+N   NKMRKCT
Sbjct: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKSRDQYPIPSPNGAFNSNSNNKHNKMRKCT 60

Query: 61  SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSG 120
           SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTP+LSG
Sbjct: 61  SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPQLSG 120

Query: 121 ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMV 180
           ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMV
Sbjct: 121 ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMV 180

Query: 181 IAEE 182
           IAEE
Sbjct: 181 IAEE 184

[Close]

BLAST of CmoCh08G001890 vs. ExPASy TrEMBL
Match: A0A1S3CBJ3 (serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.5e-74
Identity = 161/203 (79.31%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 1   MPEPNAS-NPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNS--------NNNN 60
           MPEPN S NPRKPWYQRAMEIVGTQW+ TSSK R +  I +PNG FNS        NNNN
Sbjct: 1   MPEPNTSNNPRKPWYQRAMEIVGTQWK-TSSKSR-EITITTPNGTFNSKANNGNKNNNNN 60

Query: 61  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNN---- 120
           KMRKCTSLKIATSFTRVCLCAPISSYNEIFQQA+IPPRRSHSYPRSKPFPT + NN    
Sbjct: 61  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNN 120

Query: 121 --------IVLPTPRLSGENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK 180
                   I+LP+ RLSGE+SRR FRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK
Sbjct: 121 NHIITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK 180

Query: 181 RNLM-RRKKLGPSPLSKMVIAEE 182
           RNLM RRKKLGPSPLSKMVIAEE
Sbjct: 181 RNLMRRRKKLGPSPLSKMVIAEE 201

[Close]

BLAST of CmoCh08G001890 vs. ExPASy TrEMBL
Match: A0A1S3CBM1 (serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73
Identity = 160/204 (78.43%), Postives = 168/204 (82.35%), Query Frame = 0


Query: 1   MPEPNASN--PRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNS--------NNN 60
           MPEPN SN   RKPWYQRAMEIVGTQW+ TSSK R +  I +PNG FNS        NNN
Sbjct: 1   MPEPNTSNNPSRKPWYQRAMEIVGTQWK-TSSKSR-EITITTPNGTFNSKANNGNKNNNN 60

Query: 61  NKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNN--- 120
           NKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQA+IPPRRSHSYPRSKPFPT + NN   
Sbjct: 61  NKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGN 120

Query: 121 ---------IVLPTPRLSGENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIR 180
                    I+LP+ RLSGE+SRR FRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIR
Sbjct: 121 NNHIITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIR 180

Query: 181 KRNLM-RRKKLGPSPLSKMVIAEE 182
           KRNLM RRKKLGPSPLSKMVIAEE
Sbjct: 181 KRNLMRRRKKLGPSPLSKMVIAEE 202

[Close]

BLAST of CmoCh08G001890 vs. ExPASy TrEMBL
Match: A0A5D3DLW3 (Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001260 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.2e-70
Identity = 153/193 (79.27%), Postives = 161/193 (83.42%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNS--------NNNNKMRKCTSLKI 69
           RKPWYQRAMEIVGTQW+ TSSK R +  I +PNG FNS        NNNNKMRKCTSLKI
Sbjct: 5   RKPWYQRAMEIVGTQWK-TSSKSR-EITITTPNGTFNSKANNGNKNNNNNKMRKCTSLKI 64

Query: 70  ATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNN------------IV 129
           ATSFTRVCLCAPISSYNEIFQQA+IPPRRSHSYPRSKPFPT + NN            I+
Sbjct: 65  ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNHIITHERIL 124

Query: 130 LPTPRLSGENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM-RRKKL 182
           LP+ RLSGE+SRR FRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM RRKKL
Sbjct: 125 LPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKKL 184

[Close]

BLAST of CmoCh08G001890 vs. NCBI nr
Match: XP_022960213.1 (uncharacterized protein LOC111461019 [Cucurbita moschata])

HSP 1 Score: 362.5 bits (929), Expect = 2.2e-96
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNNNKMRKCTSLK 60
           MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNNNKMRKCTSLK
Sbjct: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNNNKMRKCTSLK 60

Query: 61  IATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENS 120
           IATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENS
Sbjct: 61  IATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENS 120

Query: 121 RRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAE 180
           RRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAE
Sbjct: 121 RRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of CmoCh08G001890 vs. NCBI nr
Match: XP_023004121.1 (uncharacterized protein LOC111497548 [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 8.6e-93
Identity = 178/184 (96.74%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNN---NKMRKCT 60
           MPEPNASNPRKPWYQRAMEIVGTQWRTTSSK RDQYPIPSPNGAFNSN+N   NKMRKCT
Sbjct: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKSRDQYPIPSPNGAFNSNSNNKHNKMRKCT 60

Query: 61  SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSG 120
           SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTP+LSG
Sbjct: 61  SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPQLSG 120

Query: 121 ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMV 180
           ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMV
Sbjct: 121 ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMV 180

Query: 181 IAEE 182
           IAEE
Sbjct: 181 IAEE 184

[Close]

BLAST of CmoCh08G001890 vs. NCBI nr
Match: XP_023515076.1 (uncharacterized protein LOC111779211 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 175/184 (95.11%), Postives = 177/184 (96.20%), Query Frame = 0


Query: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNN---NKMRKCT 60
           MPEPNASNPRKPWYQRAMEIVGTQWRTTSSK RDQYPIPSPNGA NSNNN   NKMRKCT
Sbjct: 1   MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKSRDQYPIPSPNGALNSNNNNKHNKMRKCT 60

Query: 61  SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSG 120
           SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFP  TT+NIVLPTPRLSG
Sbjct: 61  SLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFP--TTSNIVLPTPRLSG 120

Query: 121 ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMV 180
           ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQM+VIRKRNLMRRKKLGPSPLSKMV
Sbjct: 121 ENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMDVIRKRNLMRRKKLGPSPLSKMV 180

Query: 181 IAEE 182
           IAEE
Sbjct: 181 IAEE 182

[Close]

BLAST of CmoCh08G001890 vs. NCBI nr
Match: KAG7025383.1 (hypothetical protein SDJN02_11878, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.1 bits (858), Expect = 3.7e-88
Identity = 171/177 (96.61%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNN-----NKMRKCTSLKIATS 69
           RKPWYQRAMEIVGTQWRTT SKPRDQYPIPSPNGAFNSNNN     NKMRKCTSLKIATS
Sbjct: 14  RKPWYQRAMEIVGTQWRTTPSKPRDQYPIPSPNGAFNSNNNNNNKHNKMRKCTSLKIATS 73

Query: 70  FTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENSRRVF 129
           FTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENSRRVF
Sbjct: 74  FTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENSRRVF 133

Query: 130 RGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE 182
           RGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE
Sbjct: 134 RGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE 190

[Close]

BLAST of CmoCh08G001890 vs. NCBI nr
Match: KAG6592971.1 (hypothetical protein SDJN03_12447, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWRTTSSKPRDQYPIPSPNGAFNSNNN----NKMRKCTSLKIATSF 69
           RKPWYQRAMEIVGTQWRTT SKPRDQYPIPSPNGAFNSNNN    NKMRKCTSLKIATSF
Sbjct: 11  RKPWYQRAMEIVGTQWRTTPSKPRDQYPIPSPNGAFNSNNNNNKHNKMRKCTSLKIATSF 70

Query: 70  TRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENSRRVFR 129
           TRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFP  TT+NIVLPTPRLSGENSRRVFR
Sbjct: 71  TRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFP--TTSNIVLPTPRLSGENSRRVFR 130

Query: 130 GKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE 182
           GKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE
Sbjct: 131 GKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE 184

[Close]

BLAST of CmoCh08G001890 vs. TAIR 10
Match: AT3G59680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 178.7 bits (452), Expect = 4.2e-45
Identity = 106/195 (54.36%), Postives = 136/195 (69.74%), Query Frame = 0


Query: 1   MPEPNASNPRKPWYQRAMEIV--GTQWRTTSSKPRDQYP---IPSPNGAFNSNNNN---- 60
           M +  AS  RKPWYQRAM +    T WRT       Q P    PS N + NS ++N    
Sbjct: 32  MQDSKASPARKPWYQRAMAVARFATNWRTIPKSSSQQQPENFRPSRNPSVNSKSSNHNQI 91

Query: 61  --KMRKCTSLKI-ATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNI 120
             ++RKC+SLK+ A SFTRVCLCAPI  Y+++F +  +PPRRS SYP SKP P  T   +
Sbjct: 92  YHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVF-RIHVPPRRSSSYPPSKPLPMETA--V 151

Query: 121 VLPTPRLSGENSRRVFRGKSLTDDVLMRRFVV-EEEAMMQVRRRNQMEVIRKRNLMRR-K 180
            + T R+S ++ RR+FRGKSL ++ LMRRFVV EEEA+M+ R+R+QME++RKRN MRR K
Sbjct: 152 AVATARMSVDSGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQMEIVRKRNQMRRKK 211

Query: 181 KLGPSPLSKMVIAEE 182
           KLGPSPLS+MVIAE+
Sbjct: 212 KLGPSPLSRMVIAED 223

[Close]

BLAST of CmoCh08G001890 vs. TAIR 10
Match: AT3G59680.1 (unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 175.3 bits (443), Expect = 4.6e-44
Identity = 103/186 (55.38%), Postives = 132/186 (70.97%), Query Frame = 0


Query: 10  RKPWYQRAMEIV--GTQWRTTSSKPRDQYP---IPSPNGAFNSNNNN------KMRKCTS 69
           RKPWYQRAM +    T WRT       Q P    PS N + NS ++N      ++RKC+S
Sbjct: 13  RKPWYQRAMAVARFATNWRTIPKSSSQQQPENFRPSRNPSVNSKSSNHNQIYHQLRKCSS 72

Query: 70  LKI-ATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSG 129
           LK+ A SFTRVCLCAPI  Y+++F +  +PPRRS SYP SKP P  T   + + T R+S 
Sbjct: 73  LKVAANSFTRVCLCAPIGPYDDVF-RIHVPPRRSSSYPPSKPLPMETA--VAVATARMSV 132

Query: 130 ENSRRVFRGKSLTDDVLMRRFVV-EEEAMMQVRRRNQMEVIRKRNLMRR-KKLGPSPLSK 182
           ++ RR+FRGKSL ++ LMRRFVV EEEA+M+ R+R+QME++RKRN MRR KKLGPSPLS+
Sbjct: 133 DSGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQMEIVRKRNQMRRKKKLGPSPLSR 192

The following BLAST results are available for this feature:

BLAST of CmoCh08G001890 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G001890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H871	1.1e-96	100.00	uncharacterized protein LOC111461019 OS=Cucurbita moschata OX=3662 GN=LOC1114610...	[more]
A0A6J1KR77	4.1e-93	96.74	uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548...	[more]
A0A1S3CBJ3	2.5e-74	79.31	serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CBM1	2.8e-73	78.43	serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DLW3	2.2e-70	79.27	Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of CmoCh08G001890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960213.1	2.2e-96	100.00	uncharacterized protein LOC111461019 [Cucurbita moschata]	[more]
XP_023004121.1	8.6e-93	96.74	uncharacterized protein LOC111497548 [Cucurbita maxima]	[more]
XP_023515076.1	1.2e-89	95.11	uncharacterized protein LOC111779211 [Cucurbita pepo subsp. pepo]	[more]
KAG7025383.1	3.7e-88	96.61	hypothetical protein SDJN02_11878, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6592971.1	3.9e-85	95.45	hypothetical protein SDJN03_12447, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh08G001890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59680.2	4.2e-45	54.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G59680.1	4.6e-44	55.38	unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..49
None	No IPR available	PANTHER	PTHR36772	SERINE/THREONINE-KINASE	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001890.1	CmoCh08G001890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity