CmoCh08G001730 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G001730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Squamosa promoter-binding-like protein 16
Location	Cmo_Chr08: 996835 .. 999772 (+)
RNA-Seq Expression	CmoCh08G001730
Synteny	CmoCh08G001730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTTCTCTCATTTTTCTATTTGTTTTCTCTCTTTACTCAACAGATTTTCCCCTTCTCTCCCACCAAAATCCCATGGATTTGGGTCTCTAAACAATACAATTCTCAACACTTCCAAAATACCCATTTCCAACTACATTATCCACTCTTCCCAATTTCTCATTCTAATTTCTTCCTTCTTTTGCTTTCTCTAACTCTTCATCCGCCCAAATCCGATTCCCTTTTGGTTTTTGAACCCGTTTCTCATCCTTCTGTTTCTTCAGTTCTTCCTCTTTCAGCTTCCTCAGGTTGAAGTTGGAGCTTCACTCGTGAGTTTCTTCTAATTTATTGCTGTTTTTTGTTTGTTTTTGTATGAATGCAATTTGTAGGGATTGAAATTAGTTTATCATGATTTGATGATGCTGCAGAATTGGGTTTCTGTTGGAATTTTCTGTTGTTCTGGATTTTAATCTTGGTGATGATGAGCTACTTTCGTTATACTTTTTACAAAATTTGAGCATAGATCTTAGAGAATTGTGACTGAAGTGGATAGTTCATGTTGATGGGCCATATTCCTCGTCTTTTGCAGCCTAAAATTTGATCTAGTTGAGGAAATTTTGACAGTACTGATTGTATTACTTGTTTGTGTTGTATTTGCTTAAGCTTGAGTTGTATCCTTCCTATTGCTGCTCAATCGTTCATCGTTCATCGTTCATCGTCTGGTTTCTTACTCTTATTGAGGGAAATTTGTATTGGGAATCGGTGTTGTTTAGAGAAAAGGAAAACGTTCAAAAAATTGTAAAGTATAGAAGGAAACTGAGAGTGTGTTGGAGTAGAGGAAGTTGGTTGATGTATTTGAGACTCAGGGGCATTGGTCATATGGGTGAAGGATCAATGGATGACATCGAAGGAACTAGAGTTACTTTGATCGAGTCGTTGTCGTCGTCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGGTGTGTTGGAATGTTTAGAACATCATATGCTGTAATTTTCTTCATTGATTCAGCCTTCTTATGGTTTTCTTTTCTGATCATTAGAATTCAAGTTATGCAGATGGGGTATACTTTTAGGCTGTTCGTTTTTTTCTGTGTTAGCGGTGGGTTTGGGCTGTTACAAAGGTATCAGAACCAGTCACCGGGCGATGTACCAATGAGGACGTTGGGTCCCCAAGGGGATGGATCGTGAACTCCCACATCGGTTGGAGAGGAGAACGAAGCATTCCTTATAAGGGTGTAGAAACCTTTCCCTAGTAGACGTGTTTTAAAACTGTGAGACTGACGGCAATACGAAATAGGCCAAAGCGGACAACATCTGCTAGCGGTGGGATTGAGCTATTACAAATGGTATCAAAGCTAGACACTGAGGGGTGTGCTAGCGAGGACGTTGGGCTCCCAATGGGGGTAGATTGTGAGATCTCACATTGGTTGGAGAGGGGAACGAAATATTCCTTATGAGTGTGAAAACCTTTTCCTAGTAGACGCGCTTTAAAATCGTGAGGCTGAGGGTGATACGTAACGGGCTAAAGTAGACACTATCTACTAGCGGTGGGCTTGGGTTGTTACAGTGGGTGGGATAAGCTCTCTTCTTTTACTCTATTTCACTACCTCGAGTTTGTGCTTGCATTTGTTTTCTGCTGTAACATGTTCAAGGCGTGCTCGTATCTTTACTCCTCGGACCCCGGACGCGGATGGCGGATTCCCATAATCTATTTGCTTTTTACCAGATAGTTGAATAAGTATTGGAAGCAAATCTTTGTGGGACTTGCATTTTATATGTTTCTTTTACTTCTTACCTTTGTCTGGTTGGTTCTGTTCTTGGTATTCATTTCAGTTCAATTACACATGTTCTTGTAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAACGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTTCGTTATATTAATTTAGGCATTCTCTTCCACGCTTGCATGTTTCGTCATCGAATGACTTGCTTGTACAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTACTGGCAATGATTTGAGCTCATCTTGGATCGGAATGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACATTGCTGACAGAAGAAAAAGTATGTTTCCCGGGCTGTCGGGCTGTGATTACAAAGAAAAACAGCCGCCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGGTGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTTGTCCATAGCGACGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGTCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGAAACATGGAAGAAGAGGGCTCATTCTTCTTGGTTCTGAAATAGATCTAAGCTAATATGGCTTATTCTCCTCAGAATTCAACCTTCCACTCTCTTGTTGCTTGTTTTTTTCTTGTTCGGGGAGTTTAAGGAATGCTTTTGTGTTGTCTGTGAAATGTCTCTTTAAATGTTTTAACTTTGTTCAGACTTGAATATTAATTTTCAGCCTCTATTTAGTTCC

mRNA sequence

CCTTTCTCTCATTTTTCTATTTGTTTTCTCTCTTTACTCAACAGATTTTCCCCTTCTCTCCCACCAAAATCCCATGGATTTGGGTCTCTAAACAATACAATTCTCAACACTTCCAAAATACCCATTTCCAACTACATTATCCACTCTTCCCAATTTCTCATTCTAATTTCTTCCTTCTTTTGCTTTCTCTAACTCTTCATCCGCCCAAATCCGATTCCCTTTTGGTTTTTGAACCCGTTTCTCATCCTTCTGTTTCTTCAGTTCTTCCTCTTTCAGCTTCCTCAGGTTGAAGTTGGAGCTTCACTCCTTGAGTTGTATCCTTCCTATTGCTGCTCAATCGTTCATCGTTCATCGTTCATCGTCTGGTTTCTTACTCTTATTGAGGGAAATTTGTATTGGGAATCGGTGTTGTTTAGAGAAAAGGAAAACGTTCAAAAAATTGTAAAGTATAGAAGGAAACTGAGAGTGTGTTGGAGTAGAGGAAGTTGGTTGATGTATTTGAGACTCAGGGGCATTGGTCATATGGGTGAAGGATCAATGGATGACATCGAAGGAACTAGAGTTACTTTGATCGAGTCGTTGTCGTCGTCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAACGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTACTGGCAATGATTTGAGCTCATCTTGGATCGGAATGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACATTGCTGACAGAAGAAAAAGTATGTTTCCCGGGCTGTCGGGCTGTGATTACAAAGAAAAACAGCCGCCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGGTGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTTGTCCATAGCGACGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGTCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGAAACATGGAAGAAGAGGGCTCATTCTTCTTGGTTCTGAAATAGATCTAAGCTAATATGGCTTATTCTCCTCAGAATTCAACCTTCCACTCTCTTGTTGCTTGTTTTTTTCTTGTTCGGGGAGTTTAAGGAATGCTTTTGTGTTGTCTGTGAAATGTCTCTTTAAATGTTTTAACTTTGTTCAGACTTGAATATTAATTTTCAGCCTCTATTTAGTTCC

Coding sequence (CDS)

ATGTATTTGAGACTCAGGGGCATTGGTCATATGGGTGAAGGATCAATGGATGACATCGAAGGAACTAGAGTTACTTTGATCGAGTCGTTGTCGTCGTCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAACGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTACTGGCAATGATTTGAGCTCATCTTGGATCGGAATGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACATTGCTGACAGAAGAAAAAGTATGTTTCCCGGGCTGTCGGGCTGTGATTACAAAGAAAAACAGCCGCCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGGTGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTTGTCCATAGCGACGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGTCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGA

Protein sequence

MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF

Homology

[Close]

BLAST of CmoCh08G001730 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.9e-42
Identity = 104/229 (45.41%), Postives = 124/229 (54.15%), Query Frame = 0


Query: 3   LRLRGIGHMGEGSMDDI----------EGTRVTLIESLSSSSSRLTKRSR--TPYNGPQV 62
           L+L G+G  G G               +G       + +++SS   KR R        Q 
Sbjct: 56  LKLGGLGEFGGGGAQPRVAVAGEPAKGKGPAAAATGAAAAASSAPAKRPRGAAAAGQQQC 115

Query: 63  PSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRK 122
           PSC VDGC  DLSKCRDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EFD+ K
Sbjct: 116 PSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAK 175

Query: 123 RSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMI 182
           RSCRKRLDGHNRRRRKPQP    +N+  +L S QG RF PF            +SW GMI
Sbjct: 176 RSCRKRLDGHNRRRRKPQPD--PMNSASYLASQQGARFSPFATP------RPEASWTGMI 235

Query: 183 KPEHNDALCSSNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVG 220
           K E +         L I+ R++      S      ++ PFL  G  + G
Sbjct: 236 KTEESPYYTHHQIPLGISSRQQHFVGSTSD---GGRRFPFLQEGEISFG 273

[Close]

BLAST of CmoCh08G001730 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-39
Identity = 112/278 (40.29%), Postives = 137/278 (49.28%), Query Frame = 0


Query: 49  QVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDD 108
           Q PSC VDGC +DL KCRDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EFD 
Sbjct: 101 QCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDA 160

Query: 109 RKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSW-I 168
            KRSCRKRLDGHNRRRRKPQP T+   +  F+ S QG RF PF +        L +SW  
Sbjct: 161 DKRSCRKRLDGHNRRRRKPQPDTMA--SASFIASQQGTRFSPFAHP------RLEASWPP 220

Query: 169 GMIKPE-------HNDALCSSNSQLDIADRRKSMFPGLSGCD----YKEKQPPFLNVG-- 228
           G++K E       H   L SS+S       R+  F  L         + ++ PFL  G  
Sbjct: 221 GVMKTEESPYHITHQIPLGSSSSS------RQQHFVALGAATPAYAKEGRRFPFLQEGEI 280

Query: 229 ----------------------------SNNVG--------NVQKVVGNGCALSLLSTPV 277
                                       S+  G         + +V+ + CALSLLS P 
Sbjct: 281 SFATGVVLEPPAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPA 340

[Close]

BLAST of CmoCh08G001730 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-39
Identity = 112/278 (40.29%), Postives = 137/278 (49.28%), Query Frame = 0


Query: 49  QVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDD 108
           Q PSC VDGC +DL KCRDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EFD 
Sbjct: 100 QCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDA 159

Query: 109 RKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSW-I 168
            KRSCRKRLDGHNRRRRKPQP T+   +  F+ S QG RF PF +        L +SW  
Sbjct: 160 DKRSCRKRLDGHNRRRRKPQPDTMA--SASFIASQQGTRFSPFAHP------RLEASWPP 219

Query: 169 GMIKPE-------HNDALCSSNSQLDIADRRKSMFPGLSGCD----YKEKQPPFLNVG-- 228
           G++K E       H   L SS+S       R+  F  L         + ++ PFL  G  
Sbjct: 220 GVMKTEESPYHITHQIPLGSSSSS------RQQHFVALGAATPAYAKEGRRFPFLQEGEI 279

Query: 229 ----------------------------SNNVG--------NVQKVVGNGCALSLLSTPV 277
                                       S+  G         + +V+ + CALSLLS P 
Sbjct: 280 SFATGVVLEPPAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPA 339

[Close]

BLAST of CmoCh08G001730 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.1e-38
Identity = 84/151 (55.63%), Postives = 96/151 (63.58%), Query Frame = 0


Query: 47  GPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEF 106
           G Q PSC VDGC +DLSK RDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EF
Sbjct: 109 GGQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEF 168

Query: 107 DDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSW 166
           D+ KRSCRKRLDGHNRRRRKPQ    ++++G F+ S QG RF  F      T      SW
Sbjct: 169 DEAKRSCRKRLDGHNRRRRKPQ--ADSMSSGSFMTSQQGTRFASF------TPPRPEPSW 228

Query: 167 IGMIKPEHNDALCSSNSQLDIADRRKSMFPG 198
            G+IK E        +    +   R+  F G
Sbjct: 229 PGIIKSEETPYYSHHHHPHPVMTSRQPHFVG 251

[Close]

BLAST of CmoCh08G001730 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-37
Identity = 102/226 (45.13%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 28  ESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 87
           E   SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI 
Sbjct: 78  EGSRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 137

Query: 88  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPR 147
           G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG +
Sbjct: 138 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSK 197

Query: 148 FLPF--GNQLLSTGNDLSSSW----IGMIKPEHNDALCSSNSQLDIADRRKS--MFPGLS 207
            L F  G+ +  T + L+ SW    + +    +  +   S S +  +   K+  MFP  S
Sbjct: 198 LLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISS 257

Query: 208 GCDYKE---KQPPFL--NVGSNNVGNVQKVVG----NGCALSLLST 237
             +      KQ PFL     S      +++      + CALSLLS+
Sbjct: 258 SPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of CmoCh08G001730 vs. ExPASy TrEMBL
Match: A0A6J1H521 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460645 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 3.5e-177
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS
Sbjct: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120

Query: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180
           NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS
Sbjct: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180

Query: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240
           SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA
Sbjct: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240

Query: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300
           GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS
Sbjct: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300

Query: 301 SIDLFRF 308
           SIDLFRF
Sbjct: 301 SIDLFRF 307

[Close]

BLAST of CmoCh08G001730 vs. ExPASy TrEMBL
Match: A0A6J1H6H4 (squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460645 PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 8.4e-171
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 11  MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 70
           MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60

Query: 71  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 130
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120

Query: 131 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 190
           TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR
Sbjct: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180

Query: 191 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 250
           RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240

Query: 251 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 308
           QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF
Sbjct: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 297

[Close]

BLAST of CmoCh08G001730 vs. ExPASy TrEMBL
Match: A0A6J1KTZ2 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497618 PE=4 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 1.3e-168
Identity = 295/307 (96.09%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MYLRLRGIGHMGEGSMDD EGTRVTLIESL SSS RLTKRSRTPYNGPQVPSCMVDGCSS
Sbjct: 1   MYLRLRGIGHMGEGSMDDNEGTRVTLIESL-SSSLRLTKRSRTPYNGPQVPSCMVDGCSS 60

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120

Query: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180
           NRRRRKPQPAT+TLNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSWIG IKPEHNDALCS
Sbjct: 121 NRRRRKPQPATMTLNAGRFLYSNQGPRFLPFGNQLLSACNDLSSSWIGTIKPEHNDALCS 180

Query: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240
           SNSQLD+ADRRKSMFPGLSGCDYKEKQPPFLNVGS+NVGNVQKVVGNGCALSLLSTPVEA
Sbjct: 181 SNSQLDVADRRKSMFPGLSGCDYKEKQPPFLNVGSSNVGNVQKVVGNGCALSLLSTPVEA 240

Query: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300
           GEINNLTSMVQSNLIPSSHF H+DGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS
Sbjct: 241 GEINNLTSMVQSNLIPSSHFSHTDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300

Query: 301 SIDLFRF 308
           SIDLF F
Sbjct: 301 SIDLFWF 306

[Close]

BLAST of CmoCh08G001730 vs. ExPASy TrEMBL
Match: A0A6J1KPU5 (squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497618 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 4.2e-162
Identity = 285/297 (95.96%), Postives = 289/297 (97.31%), Query Frame = 0


Query: 11  MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 70
           MGEGSMDD EGTRVTLIESL SSS RLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 1   MGEGSMDDNEGTRVTLIESL-SSSLRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60

Query: 71  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 130
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120

Query: 131 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 190
           T+TLNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSWIG IKPEHNDALCSSNSQLD+ADR
Sbjct: 121 TMTLNAGRFLYSNQGPRFLPFGNQLLSACNDLSSSWIGTIKPEHNDALCSSNSQLDVADR 180

Query: 191 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 250
           RKSMFPGLSGCDYKEKQPPFLNVGS+NVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 181 RKSMFPGLSGCDYKEKQPPFLNVGSSNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240

Query: 251 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 308
           QSNLIPSSHF H+DGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLF F
Sbjct: 241 QSNLIPSSHFSHTDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFWF 296

[Close]

BLAST of CmoCh08G001730 vs. ExPASy TrEMBL
Match: A0A0A0KAG4 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.3e-134
Identity = 249/332 (75.00%), Postives = 267/332 (80.42%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MY  LRGIG+M E SMDD++GTRV LIE   SSSSRL KRSR P +G QVPSCMVDGCSS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIE---SSSSRLMKRSRAPGSGAQVPSCMVDGCSS 60

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCE HSKTPKVTICG+EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 61  DLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120

Query: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180
           NRRRRKPQPAT+TLNAGRFLY NQGPRFLPFGNQLL+  +D+SSSWIGMIKPE+N  LC 
Sbjct: 121 NRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCG 180

Query: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQ-----------------PPFLNVGSNNVGNVQK 240
            NSQ D  DRRKSM PG    DYKEKQ                  PFLNVGS+N GNVQK
Sbjct: 181 GNSQFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQK 240

Query: 241 VVGNG--------CALSLLSTPVEAGEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSP 300
           V+GNG        CALSLLSTPVE GEI NL+SM QSNLIP +HF+HSDGLG E D +S 
Sbjct: 241 VLGNGSNRFFDSDCALSLLSTPVEPGEI-NLSSMSQSNLIPPAHFIHSDGLGLEGDPISS 300

Query: 301 RLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 308
            LVSDGSSDANIRCYS F+DGPDGSS+DLFRF
Sbjct: 301 GLVSDGSSDANIRCYSTFQDGPDGSSVDLFRF 328

[Close]

BLAST of CmoCh08G001730 vs. NCBI nr
Match: XP_022959621.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata] >XP_022959622.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata])

HSP 1 Score: 630.6 bits (1625), Expect = 7.3e-177
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS
Sbjct: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120

Query: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180
           NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS
Sbjct: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180

Query: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240
           SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA
Sbjct: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240

Query: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300
           GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS
Sbjct: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300

Query: 301 SIDLFRF 308
           SIDLFRF
Sbjct: 301 SIDLFRF 307

[Close]

BLAST of CmoCh08G001730 vs. NCBI nr
Match: KAG6592958.1 (putative DNA primase large subunit, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 624.8 bits (1610), Expect = 4.0e-175
Identity = 306/307 (99.67%), Postives = 306/307 (99.67%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MYLRLRGIGHMGEGSMDDIEGTRVTLIESL SSSSRLTKRSRTPYNGPQVPSCMVDGCSS
Sbjct: 590 MYLRLRGIGHMGEGSMDDIEGTRVTLIESL-SSSSRLTKRSRTPYNGPQVPSCMVDGCSS 649

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 650 DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 709

Query: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180
           NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS
Sbjct: 710 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 769

Query: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240
           SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA
Sbjct: 770 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 829

Query: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300
           GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS
Sbjct: 830 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 889

Query: 301 SIDLFRF 308
           SIDLFRF
Sbjct: 890 SIDLFRF 895

[Close]

BLAST of CmoCh08G001730 vs. NCBI nr
Match: XP_022959623.1 (squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita moschata] >KAG7025369.1 Squamosa promoter-binding-like protein 16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 609.4 bits (1570), Expect = 1.7e-170
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 11  MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 70
           MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60

Query: 71  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 130
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120

Query: 131 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 190
           TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR
Sbjct: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180

Query: 191 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 250
           RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240

Query: 251 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 308
           QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF
Sbjct: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 297

[Close]

BLAST of CmoCh08G001730 vs. NCBI nr
Match: XP_023513759.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513760.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513761.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 607.1 bits (1564), Expect = 8.6e-170
Identity = 295/307 (96.09%), Postives = 300/307 (97.72%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MYLRLRGIGHMGEGSMDD+EGTRVTLIES SSSSSRLTKRSRTPYNGPQVPSCMVDGCSS
Sbjct: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIES-SSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120

Query: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180
           NRRRRKPQPATI LNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSW+G IKPEHNDALCS
Sbjct: 121 NRRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCS 180

Query: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240
           SNSQLD ADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKV+GNGCALSLLSTPVEA
Sbjct: 181 SNSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEA 240

Query: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300
           GEINNLTSMVQSNLIPSSHF+H+DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGS
Sbjct: 241 GEINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGS 300

Query: 301 SIDLFRF 308
           SIDLFRF
Sbjct: 301 SIDLFRF 306

[Close]

BLAST of CmoCh08G001730 vs. NCBI nr
Match: XP_023004220.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima])

HSP 1 Score: 602.1 bits (1551), Expect = 2.8e-168
Identity = 295/307 (96.09%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MYLRLRGIGHMGEGSMDD EGTRVTLIESL SSS RLTKRSRTPYNGPQVPSCMVDGCSS
Sbjct: 1   MYLRLRGIGHMGEGSMDDNEGTRVTLIESL-SSSLRLTKRSRTPYNGPQVPSCMVDGCSS 60

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120

Query: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180
           NRRRRKPQPAT+TLNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSWIG IKPEHNDALCS
Sbjct: 121 NRRRRKPQPATMTLNAGRFLYSNQGPRFLPFGNQLLSACNDLSSSWIGTIKPEHNDALCS 180

Query: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240
           SNSQLD+ADRRKSMFPGLSGCDYKEKQPPFLNVGS+NVGNVQKVVGNGCALSLLSTPVEA
Sbjct: 181 SNSQLDVADRRKSMFPGLSGCDYKEKQPPFLNVGSSNVGNVQKVVGNGCALSLLSTPVEA 240

Query: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300
           GEINNLTSMVQSNLIPSSHF H+DGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS
Sbjct: 241 GEINNLTSMVQSNLIPSSHFSHTDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300

Query: 301 SIDLFRF 308
           SIDLF F
Sbjct: 301 SIDLFWF 306

[Close]

BLAST of CmoCh08G001730 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-38
Identity = 102/226 (45.13%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 28  ESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 87
           E   SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI 
Sbjct: 78  EGSRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 137

Query: 88  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPR 147
           G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG +
Sbjct: 138 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSK 197

Query: 148 FLPF--GNQLLSTGNDLSSSW----IGMIKPEHNDALCSSNSQLDIADRRKS--MFPGLS 207
            L F  G+ +  T + L+ SW    + +    +  +   S S +  +   K+  MFP  S
Sbjct: 198 LLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISS 257

Query: 208 GCDYKE---KQPPFL--NVGSNNVGNVQKVVG----NGCALSLLST 237
             +      KQ PFL     S      +++      + CALSLLS+
Sbjct: 258 SPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of CmoCh08G001730 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-38
Identity = 102/226 (45.13%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 28  ESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 87
           E   SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI 
Sbjct: 78  EGSRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 137

Query: 88  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPR 147
           G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG +
Sbjct: 138 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSK 197

Query: 148 FLPF--GNQLLSTGNDLSSSW----IGMIKPEHNDALCSSNSQLDIADRRKS--MFPGLS 207
            L F  G+ +  T + L+ SW    + +    +  +   S S +  +   K+  MFP  S
Sbjct: 198 LLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISS 257

Query: 208 GCDYKE---KQPPFL--NVGSNNVGNVQKVVG----NGCALSLLST 237
             +      KQ PFL     S      +++      + CALSLLS+
Sbjct: 258 SPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of CmoCh08G001730 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-38
Identity = 102/226 (45.13%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 28  ESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 87
           E   SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI 
Sbjct: 78  EGSRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 137

Query: 88  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPR 147
           G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG +
Sbjct: 138 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSK 197

Query: 148 FLPF--GNQLLSTGNDLSSSW----IGMIKPEHNDALCSSNSQLDIADRRKS--MFPGLS 207
            L F  G+ +  T + L+ SW    + +    +  +   S S +  +   K+  MFP  S
Sbjct: 198 LLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISS 257

Query: 208 GCDYKE---KQPPFL--NVGSNNVGNVQKVVG----NGCALSLLST 237
             +      KQ PFL     S      +++      + CALSLLS+
Sbjct: 258 SPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of CmoCh08G001730 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 140.2 bits (352), Expect = 2.8e-33
Identity = 88/225 (39.11%), Postives = 122/225 (54.22%), Query Frame = 0


Query: 31  SSSSSRLTKRSRTPYNGP--QVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICG 90
           SSS  R  +R R   +G   Q+P C V+GC  DL+  + Y+ RH+VC  HSKTPKVT+ G
Sbjct: 50  SSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAG 109

Query: 91  REQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRF------LYS 150
            EQRFCQQCSRFH L EFD  KRSCR+RL GHN RRRKPQPA++++ A R+      LY 
Sbjct: 110 IEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYE 169

Query: 151 N--QGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADRRKSMFPGLSG 210
           N   G      GNQ +   +  +     M +P     + S + Q++  +       G  G
Sbjct: 170 NGDAGMNGSFLGNQEIGWPSSRTLDTRVMRRP-----VSSPSWQINPMNVFSQGSVGGGG 229

Query: 211 CDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINN 246
             +   +     +    + + + +  + CALSLLS P +  + NN
Sbjct: 230 TSFSSPE-----IMDTKLESYKGIGDSNCALSLLSNPHQPHDNNN 264

[Close]

BLAST of CmoCh08G001730 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-30
Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 39  KRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCS 98
           K++++     QVP C +DGC  DLS  +DYHR+H+VCE HSK PKV + G E+RFCQQCS
Sbjct: 162 KKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCS 221

Query: 99  RFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLST 158
           RFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+ R     Q    L +    L+T
Sbjct: 222 RFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERVFDRRQHTSML-WNGLSLNT 281

Query: 159 GNDLSSSW 167
            ++   +W
Sbjct: 282 RSEEKYTW 287

The following BLAST results are available for this feature:

BLAST of CmoCh08G001730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YZE8	1.9e-42	45.41	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I57	9.6e-39	40.29	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
Q49I55	9.6e-39	40.29	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q0J0K1	8.1e-38	55.63	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]
B9DI20	1.8e-37	45.13	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]

BLAST of CmoCh08G001730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H521	3.5e-177	100.00	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1H6H4	8.4e-171	100.00	squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita moschata OX=36...	[more]
A0A6J1KTZ2	1.3e-168	96.09	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1KPU5	4.2e-162	95.96	squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KAG4	6.3e-134	75.00	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE...	[more]

BLAST of CmoCh08G001730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959621.1	7.3e-177	100.00	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata] >XP_02...	[more]
KAG6592958.1	4.0e-175	99.67	putative DNA primase large subunit, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022959623.1	1.7e-170	100.00	squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita moschata] >KAG70...	[more]
XP_023513759.1	8.6e-170	96.09	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_023004220.1	2.8e-168	96.09	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima]	[more]

BLAST of CmoCh08G001730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	1.3e-38	45.13	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	1.3e-38	45.13	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	1.3e-38	45.13	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	2.8e-33	39.11	squamosa promoter binding protein-like 9	[more]
AT1G27370.1	1.7e-30	50.00	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 53..126 e-value: 1.4E-28 score: 99.0
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 50..127 score: 31.743927
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 45..114 e-value: 1.1E-31 score: 110.8
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 51..132
None	No IPR available	PANTHER	PTHR31251:SF126	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A-RELATED	coord: 32..253
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 32..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001730.1	CmoCh08G001730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding