CmoCh08G001100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G001100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Cmo_Chr08: 570549 .. 572373 (+)
RNA-Seq Expression	CmoCh08G001100
Synteny	CmoCh08G001100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGGTTGAAGGGTAATTTCGAGGGGGGTATGAGCAACCGAATTAGGCGCCGGAGTGTGGCGTCCCACCACACCATACACTATTTCATAAAAATCTCTCCGCCTTTCTCTCTCGGAATTCTCTCTCGGAATTCTCTCTCAATCATCCTAATTTCGAGATCCATCCATCCATTGAATTTCAATTCAATTCAATCCCATCTCCATTTTGTTCCAATCCAATTCATTCCCTCTCCAATTCATCCAATCCCACCTCCACCTCCACCTCCAAATTCCCTCAACATTCATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCTCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCCAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGACTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTTGCCCCGACCCCCGACGGGTCCTACCTGGACGCCCAGGTGTCCATCCGCGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGTGATATGCCTACATGCAATATCAATCTGCTTAGATGGTATGTTCTTCCTCCCTTTTTTCTTTTTTTTTCTTTTTCTTTTTCTTTTTAATTATTATTATTGTTGGAGGTTCAAAGTAAGTAATATCTTCCCATTGGTACGAGGCCTTTTGAGGAAGCACAAATCAAAGCCATGAGAGCCTGGACAGTATCATCCCACCGTGGCATGAGAGCCTGGACAGTATCATCCCACCGTGGCATGAGAGCCTGGACAGTATCATCCCACCGTGGCATGAGAGCCTGGACAGTATCATCCCACCGTGGCATGAGAGCCTGGATAGTGGCATGAGAGTCCACTCAAAGTGGACAATATCATACCATTTTGTTCACCTAACAATTATAATTATTATTTCCATCATTTTTAATTATTTTGGATAAAAAACATCTTACTTAAATATTTTAATTATTAAATTTATATAGATGTTTTTTCTTTTTAAATTATATTAAAAATATTCTTAATTAATATAAAATATTTTGAATGCAGGATCAATATACGCGGATGAGATTGCAATTGCACTACACTATTGCTCGGAAGTCAATTATATTATATTATTTATTTTTATTGGGTTGAATATTTTATTGGAACTTTTTTCTTTTTTTCCTTTTTTTTTAAATCGAATTAATTTTTATTAAATATTACTACTTTAGAACGTCAAATAATTCTTTGACTAAATACACATTTGTTCTAAGTGTGAAATATAATGAAAAAAAAGGAAAAAAAAAGAGGGTTTCATTTAATTTGTACTAATATAAAGGGTGTTTATATTATTGTGATTATAATGTAAAGACAATGTAATTTGTTTTTTTA

mRNA sequence

AGTTGGTTGAAGGGTAATTTCGAGGGGGGTATGAGCAACCGAATTAGGCGCCGGAGTGTGGCGTCCCACCACACCATACACTATTTCATAAAAATCTCTCCGCCTTTCTCTCTCGGAATTCTCTCTCGGAATTCTCTCTCAATCATCCTAATTTCGAGATCCATCCATCCATTGAATTTCAATTCAATTCAATCCCATCTCCATTTTGTTCCAATCCAATTCATTCCCTCTCCAATTCATCCAATCCCACCTCCACCTCCACCTCCAAATTCCCTCAACATTCATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCTCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCCAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGACTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTTGCCCCGACCCCCGACGGGTCCTACCTGGACGCCCAGGTGTCCATCCGCGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGTGATATGCCTACATGCAATATCAATCTGCTTAGATGGATCAATATACGCGGATGAGATTGCAATTGCACTACACTATTGCTCGGAAGTCAATTATATTATATTATTTATTTTTATTGGGTTGAATATTTTATTGGAACTTTTTTCTTTTTTTCCTTTTTTTTTAAATCGAATTAATTTTTATTAAATATTACTACTTTAGAACGTCAAATAATTCTTTGACTAAATACACATTTGTTCTAAGTGTGAAATATAATGAAAAAAAAGGAAAAAAAAAGAGGGTTTCATTTAATTTGTACTAATATAAAGGGTGTTTATATTATTGTGATTATAATGTAAAGACAATGTAATTTGTTTTTTTA

Coding sequence (CDS)

ATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCTCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCCAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGACTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTTGCCCCGACCCCCGACGGGTCCTACCTGGACGCCCAGGTGTCCATCCGCGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGTGATATGCCTACATGCAATATCAATCTGCTTAGATGGATCAATATACGCGGATGA

Protein sequence

MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNINLLRWINIRG

Homology

[Close]

BLAST of CmoCh08G001100 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.4e-09
Identity = 49/156 (31.41%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 12  RPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLI 71
           RP     P  S  S     SK P  +   R      PKKR+S CCR  C  FCFL+L L+
Sbjct: 19  RPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCFCYTFCFLLL-LV 78

Query: 72  VVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLA 131
           V V  +  + YL+F PKLP + +   +++ F +      S L    ++ +  KNPN+K+ 
Sbjct: 79  VAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL---NQDSSLTTAFNVTITAKNPNEKIG 138

Query: 132 IKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTV 168
           I Y       +     +     L  F QG  +TT +
Sbjct: 139 IYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVI 170

[Close]

BLAST of CmoCh08G001100 vs. ExPASy TrEMBL
Match: A0A6J1H856 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461008 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.0e-134
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240

Query: 241 NLLRWINIRG 251
           NLLRWINIRG
Sbjct: 241 NLLRWINIRG 250

[Close]

BLAST of CmoCh08G001100 vs. ExPASy TrEMBL
Match: A0A6J1KTU7 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111498155 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 9.7e-133
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 85  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 144

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 145 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 204

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAI+YGKIEYDVMVGQAAEFGQRELQGFTQ RRSTTTVKADSGVKGKMLGV
Sbjct: 205 VEFKNPNDKLAIRYGKIEYDVMVGQAAEFGQRELQGFTQARRSTTTVKADSGVKGKMLGV 264

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPI VKLDCESKLKNIEAGDMPTCNI
Sbjct: 265 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPISVKLDCESKLKNIEAGDMPTCNI 324

Query: 241 NLLRWINIRG 251
           NLLRWINIRG
Sbjct: 325 NLLRWINIRG 334

[Close]

BLAST of CmoCh08G001100 vs. ExPASy TrEMBL
Match: A0A1S3BDG3 (uncharacterized protein LOC103488682 OS=Cucumis melo OX=3656 GN=LOC103488682 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.0e-105
Identity = 198/253 (78.26%), Postives = 220/253 (86.96%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 60
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 61  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 120
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 121 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE GDMP 
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 241 CNINLLRWINIRG 251
           CNINLLRWINIRG
Sbjct: 241 CNINLLRWINIRG 253

[Close]

BLAST of CmoCh08G001100 vs. ExPASy TrEMBL
Match: A0A0A0KCD8 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042460 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 196/253 (77.47%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 60
           MAD PLKPPLQ+PPGYKD    + S SSAS     PP  R KPR P+SYKPKKRK +CCR
Sbjct: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60

Query: 61  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 120
            CCC+FCFLILFLIVV +LA ALFYL++DPKLP+FHLLAFRISSFKV+ TPDGS+LD+QV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSTTPDGSFLDSQV 120

Query: 121 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           SIRVEFKNPN+KL+IKYGKIEYDV VGQA EFG+REL GFTQGRRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           L VED  RL+SK+QSKA+EVKVEA T VGVV QGW +GPI VKLDCESKLKNI+ GDMPT
Sbjct: 181 LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT 240

Query: 241 CNINLLRWINIRG 251
           CNINLLRWINIRG
Sbjct: 241 CNINLLRWINIRG 253

[Close]

BLAST of CmoCh08G001100 vs. ExPASy TrEMBL
Match: A0A5D3DEK8 (Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00040 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 9.8e-101
Identity = 192/247 (77.73%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 60
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 61  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 120
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 121 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE GDMP 
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 241 CNINLLR 245
           CNINLLR
Sbjct: 241 CNINLLR 247

[Close]

BLAST of CmoCh08G001100 vs. NCBI nr
Match: XP_022960198.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_023515084.1 NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 489.2 bits (1258), Expect = 2.1e-134
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240

Query: 241 NLLRWINIRG 251
           NLLRWINIRG
Sbjct: 241 NLLRWINIRG 250

[Close]

BLAST of CmoCh08G001100 vs. NCBI nr
Match: KAG6592899.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 485.3 bits (1248), Expect = 3.1e-133
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240

Query: 241 NLLRWINIR 250
           NLLRWINI+
Sbjct: 241 NLLRWINIQ 249

[Close]

BLAST of CmoCh08G001100 vs. NCBI nr
Match: XP_023005046.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 482.6 bits (1241), Expect = 2.0e-132
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 85  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 144

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 145 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 204

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAI+YGKIEYDVMVGQAAEFGQRELQGFTQ RRSTTTVKADSGVKGKMLGV
Sbjct: 205 VEFKNPNDKLAIRYGKIEYDVMVGQAAEFGQRELQGFTQARRSTTTVKADSGVKGKMLGV 264

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPI VKLDCESKLKNIEAGDMPTCNI
Sbjct: 265 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPISVKLDCESKLKNIEAGDMPTCNI 324

Query: 241 NLLRWINIRG 251
           NLLRWINIRG
Sbjct: 325 NLLRWINIRG 334

[Close]

BLAST of CmoCh08G001100 vs. NCBI nr
Match: KAG7025304.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474.9 bits (1221), Expect = 4.2e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240

Query: 241 NLLR 245
           NLLR
Sbjct: 241 NLLR 244

[Close]

BLAST of CmoCh08G001100 vs. NCBI nr
Match: XP_008445748.1 (PREDICTED: uncharacterized protein LOC103488682 [Cucumis melo])

HSP 1 Score: 390.6 bits (1002), Expect = 1.0e-104
Identity = 198/253 (78.26%), Postives = 220/253 (86.96%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 60
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 61  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 120
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 121 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE GDMP 
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 241 CNINLLRWINIRG 251
           CNINLLRWINIRG
Sbjct: 241 CNINLLRWINIRG 253

[Close]

BLAST of CmoCh08G001100 vs. TAIR 10
Match: AT2G46300.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 186.4 bits (472), Expect = 2.8e-47
Identity = 101/252 (40.08%), Postives = 146/252 (57.94%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MAD  + P LQ+PPGY+DP+ S      P  +    R    +PTSY+PKK++ SCCR CC
Sbjct: 1   MADYQMNPVLQKPPGYRDPNMSSPPPPPPPIQQQPMRKAVPMPTSYRPKKKRRSCCRFCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           C  C  ++  I ++ +  A+FYL FDPKLP F L +FR+  FK+A  PDG+ L A    R
Sbjct: 61  CCICITLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVAR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAE---FGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           VE KNPN KL   YG    D+ VG   +    G+  + GF QG +++T+VK ++ VK ++
Sbjct: 121 VEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQL 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           +    + RL +K+QSK + + V A+T VG+   G  +G + V L C     N    D P 
Sbjct: 181 VERGLAKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSLNKLDTDSPK 240

Query: 241 CNINLLRWINIR 250
           C +N L+W+ I+
Sbjct: 241 CILNTLKWVTIQ 252

[Close]

BLAST of CmoCh08G001100 vs. TAIR 10
Match: AT4G01110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits to 272 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 82/257 (31.91%), Postives = 134/257 (52.14%), Query Frame = 0


Query: 6   LKPPLQRPPGYKD-------PSASGSSASIPVSKPPAARNKPRLPTSYKP-KKRKSSCCR 65
           LKP LQ+PPGY++       P  S SS+S  + +PP    K  +P ++ P KKR+ S CR
Sbjct: 7   LKPVLQKPPGYRELHSQPQTPLGSSSSSSSMLRRPP----KHAIPAAFYPTKKRQWSRCR 66

Query: 66  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDG---SYLD 125
           + CC  C  +  +I+++ L  ++F+L + P+LP+  L +FR+S+F  +    G   S L 
Sbjct: 67  VFCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLT 126

Query: 126 AQVSIRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADS 185
           A+ + R++F+NPN KL   YG ++  V VG+       G  +++GF +   + T V    
Sbjct: 127 AEATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIVPI 186

Query: 186 GVKGKMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIE 245
            VK + +      RL +  +SK + VKV A+T VG+      +  + V + C        
Sbjct: 187 KVKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVRLQTL 246

Query: 246 AGDMPTCNINLLRWINI 249
              M  C I +L+WI +
Sbjct: 247 DSKMSKCTIKMLKWIKL 259

[Close]

BLAST of CmoCh08G001100 vs. TAIR 10
Match: AT1G01453.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-26
Identity = 78/254 (30.71%), Postives = 133/254 (52.36%), Query Frame = 0


Query: 2   ADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCC 61
           A+ PL+P LQ+PPG++D     S+     +  P  R +P  P     KKR+ S CR+ CC
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPAD---KKRRCSFCRVFCC 75

Query: 62  VFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVA--PTPDG-SYLDAQVS 121
             C L   +++++ +A A+F+L + PKLP+  L +F+IS+F  +   + DG S+L A  +
Sbjct: 76  CVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTT 135

Query: 122 IRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADSGVKG 181
             ++F+NPN KL   YG  +  V++G+          +++GF +   + T V   + V+ 
Sbjct: 136 SVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRK 195

Query: 182 KMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDM 241
           + +    + RL  + +SK + V V A+T VG+      +  + V L C   +       M
Sbjct: 196 RQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKM 255

Query: 242 PTCNINLLRWINIR 250
             C I +L+WI +R
Sbjct: 256 AQCTIKMLKWIKLR 266

[Close]

BLAST of CmoCh08G001100 vs. TAIR 10
Match: AT1G01453.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-25
Identity = 76/250 (30.40%), Postives = 130/250 (52.00%), Query Frame = 0


Query: 2   ADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCC 61
           A+ PL+P LQ+PPG++D     S+     +  P  R +P  P     KKR+ S CR+ CC
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPAD---KKRRCSFCRVFCC 75

Query: 62  VFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVA--PTPDG-SYLDAQVS 121
             C L   +++++ +A A+F+L + PKLP+  L +F+IS+F  +   + DG S+L A  +
Sbjct: 76  CVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTT 135

Query: 122 IRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADSGVKG 181
             ++F+NPN KL   YG  +  V++G+          +++GF +   + T V   + V+ 
Sbjct: 136 SVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRK 195

Query: 182 KMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDM 241
           + +    + RL  + +SK + V V A+T VG+      +  + V L C   +       M
Sbjct: 196 RQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKM 255

Query: 242 PTCNINLLRW 246
             C I +L+W
Sbjct: 256 AQCTIKMLKW 262

[Close]

BLAST of CmoCh08G001100 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 62.4 bits (150), Expect = 6.0e-10
Identity = 49/156 (31.41%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 12  RPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLI 71
           RP     P  S  S     SK P  +   R      PKKR+S CCR  C  FCFL+L L+
Sbjct: 19  RPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCFCYTFCFLLL-LV 78

Query: 72  VVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLA 131
           V V  +  + YL+F PKLP + +   +++ F +      S L    ++ +  KNPN+K+ 
Sbjct: 79  VAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL---NQDSSLTTAFNVTITAKNPNEKIG 138

Query: 132 IKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTV 168
           I Y       +     +     L  F QG  +TT +
Sbjct: 139 IYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVI 170

The following BLAST results are available for this feature:

BLAST of CmoCh08G001100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	8.4e-09	31.41	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of CmoCh08G001100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H856	1.0e-134	100.00	NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461008 PE=4 SV=1	[more]
A0A6J1KTU7	9.7e-133	98.80	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111498155 PE=4 SV=1	[more]
A0A1S3BDG3	5.0e-105	78.26	uncharacterized protein LOC103488682 OS=Cucumis melo OX=3656 GN=LOC103488682 PE=...	[more]
A0A0A0KCD8	1.2e-103	77.47	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042460 PE=4 ...	[more]
A0A5D3DEK8	9.8e-101	77.73	Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmoCh08G001100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960198.1	2.1e-134	100.00	NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_023515084.1 NDR1/HIN1-like pro...	[more]
KAG6592899.1	3.1e-133	99.60	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023005046.1	2.0e-132	98.80	NDR1/HIN1-like protein 13 [Cucurbita maxima]	[more]
KAG7025304.1	4.2e-130	100.00	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008445748.1	1.0e-104	78.26	PREDICTED: uncharacterized protein LOC103488682 [Cucumis melo]	[more]

BLAST of CmoCh08G001100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46300.1	2.8e-47	40.08	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01110.1	1.2e-26	31.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G01453.1	1.6e-26	30.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G01453.2	3.0e-25	30.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G65690.1	6.0e-10	31.41	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 121..223 e-value: 1.0E-9 score: 38.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR31234:SF35	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 1..245
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 1..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001100.1	CmoCh08G001100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane