CmoCh08G000890 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGATCATTTCATATGATTATGCTACAATCAAGATTTAATTCCCAAAAGGATAAAACGTGAAATTCCGTTCGCCAACAACAGCTCCGGAAAATCGGCACAATTTATAGATTTCAGATGGTTAAATGCGTTCTCTGACGGCTGCAATAACTCACGTTCAAGTTGGGAAATCTTCTCATCCATTCATCTCTACTGCCCATCTCTTGTTTCCGACTTAAAATTCTTCTCTCTAATCTTGTTTGGGGAAGATAATGAGCAGTTTCAAGGATTTTTGTTCGAAAAAGACCGTAATCGGTCTTGGATTGGGACAATTTTTGTCTCTTCTTACCACTTTCACTGGCTCTGCATCCTCTGAACTCGCGAAAAGAGGTACATTCTTCGTATTTTTCTGCGTCTTTTTCTTGGATTTTCATGTACTATTCTGAGTTGGAAATATGAGGATTCTGTGCACTATAAATAGTTTTGGTTTGAACTTCAACTTGTCTGGGAAGAACAGGGAGTTCTACAAAGCGCAAATGGAAGATCTATTTTCCTTTAATATGATTTAAGTTTTACTTAATGTTAAGAACTCATACAAAAGTCTAGCTTAAACAATATCCTCTATGAGGTTAATTCTCACCCCCACTTACTGTTGAACGCAATCACTTTAGCTTAAGCCTTTTGATTTAGTGGTAATTGAATAGTTTACTTTTTTGGAGCTAAATAAGAACTCGTGGCTTGTGATATCCCACATCGGTTGGGGAGGAGAACAAAACACCGTATATATGGGTGTGAAAACTTTAAGGGGAAGCTCGAAAGGACAAGCCGAAAGAGAAAAATATCTGTTAGCGATGGGCTTGGGCCGTTACAAATGGTAGAGGAGCCAGACACTGAACGAGTATCAGCGAAGATGATGGGCCCTGAAGGGGGGTGGATTGTGATATCCCACATCGGTTGGGGAGGAGAACGAAACACCTTTTATAAAGGTGTGGAAACCTCTCCGTAGTAAAAGCATTTTAAAAACCTCGAGGAGAAGTGAAAGGAAAAACCCAAAAAGGACAATATCGGCTGGCGGTGGACTTGGACCATTACATGGGACATTCTTAAATATGCAATAATTTATTAGTTATTAACACGTCATACTATTTTGGGCAGGAATTAATGCACCGACTTCACAGTCCTTTATAAACTATGTCCTCTTGGCCATTGTCTATGGAAGTATAGTGCTCTACCGTAAGAAAGCACTCAAGGTGATTGTGATTCTTTTTGCTTTGATACATTTTGGACTGATTGAATGGCTACCCGTTGAAATTTGATAGTTGATGGAGAAAGAAGCTAAACAATTGAATGTTCCTCATATTGTTGATGAAGTTTTCCAGACTATATTTTCTTGCTGCTTTTGAATTGTTTTGCATGGCAATAGCGAAGTTCAAAATATTTAGACAGAGTACATGTGGGGCACCAAACATAGTAATCGTAATGCTGTCATGAAAATCTTTTAAAGTTCACTTTGTGCATAAAAGTTTAACTTAGATATAGCTATCTTCGTTAGATAGATGGCTAAAGGTGGCCGTTGCATCCTATAATAATTTGGCTGTTGAATTAGAGATGTGAATTGTTGAAGGCTTGATTATACCAGTTGCTATCTGTGAGATTCCACATTGGTTGAAGAAGGGAACGAAGCATTCTTTATATGGGCGTGGAAACCTCTCCTTAGTAGACACGTTTTAAAACCATAATGCTGACGGCAATATGTAACGGGCCAAAGCGAATAATATCTATTAGCGGTGGACTTAGGCTATTACAAATTGTATCAGAGCCAAACACCAGGTGGTGTGCCAGCGAGGACGCTGGGCTCCCAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGATAGGAGAATGAAGCATTCCTTGTAAAGGTGTCGAAACCTCTTCCTAGTAGACGTGTTTTAAAACCGTGAGGCTAACGGCAATACGTAACGGGCCAAATCGGATAATATCTGACAGCATTACACTTTCTTTGTACAACGCTAAGGTGACATGGGAGCCCCTAATCTATTAGACATTCTCCACATGAAGATGTCAGAACAACTTGTGTTTAGTTATGCGGTTGATATTCTTTTCTTTTGCTAATTCATATCTCTGATGCGTGAATTTCTTACTTATCTTCTTTTTAAATCTTACAGGCCAAATGGTACTTCTACGTACCACTAGGATTGGTAGATGTAGAAGCCAACTACCTTGGTACGGAGATTTTTCTTGTCTTGACGATATTCTTTGATAAAACGAAACGTTATAGGACATACCAATATTAAGAACGTTCTTTCGCGCTGTGTGTTCTTCTTGTAAAAGAGGATTTTCATGAACCTTCTCTAATCATCATTGCCCATGAGTCATGATCTATAGAAGTCTATATATATATTAGTCTTTACTTCTTATATCGTAATACTTTGCCTAAATGTTTAATAATTTGATACTGACGTTGTGCTGATGTGAGGTGCAGTTGTGAAGGCCTATCAGTACACATCTCTGACAAGTGTCATGCTGCTGGATTGTTGGACAATCCCTTGTGTTATGCTGCTAACCTGGCTTTTCCTGAAAACAAAATACAGATTCAGGAAGATAGCTGGTGTTGTTGTTTGTGTTGCTGGTCTTGTCATGGTCATTTTTTCTGATGTTCATGCTGGTGACCGAGCTGGTAACGACACGAACACCATTAAGTCCTCTCTCCCTCTCTCTCTCACCCCTTAGCCTGTAACAGGCCAAGCCCACCGCCACCAAATATTGTCCTCTTTGGGTTTTTTCTTTCGGAATTCCTCTTAAGGTTTTAAAACGCGTCTACTAGGGAGAAGTTTTCACACCCTTATAAAGAATGCTTCGTTCCCCTCTCCAACCAATGCGGGATCTCACAATCCACCTCTCTTGGGGGACCAGCGTCCTCGCTGACACACCATTCAGTGCCTGACTCTGATATCATTTGTAATAGCTCAAGCCCACTGCTAGCAGATGTTGTCCTCTTTGGGCTTTCCCTTGAGGTTTTAAAACGCGCCTACTAGGGAGAGGTTCCCACACCCTTATAAGGAACGCTTCGTTCCCCTCTCCAACTAATGTGGCGTCTCACAATCCACCTCTCTTGGGGAACTAGTGTCCTCGTTGACTCACCGTTCAGTGCCTGGCTATGATATCATTTGTAGCTCAAGCTCACCGATAGCAGATATTGTTCTCTTTGGGCTTTCCCTTCCAGGCTTCCCCTCAAGGATTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCTTATAAATAACGCTTCATTCCCCTCTCCAACCAACCCCCAATTTGATTTTTATGACATTCTATTACATCCGTAGGCATTTTCGTGATGAACCTTGCAAAATGATGTTTCCTTGTACTTACATGCACCAATATGACCTGCAGGAGGAACCAGCCCACTTAAAGGGGATGCTCTTGTTATAGCTGCTGCTACCCTTTATGCTGTTACTAATGTCAGCGAGGTAAGGCCACATGTGTGCAGTAGCAGTTACTTTTTCCGTTACAGATAGACTCAAGCCATTTGATGATTGGTTTGTGATATACAATTATTAAACACTTAATAAATGTTTAACTTTCTACTGAAGGAATTTCTGGTGAAGAATGCTGATAGAGTTGAGCTAATGGCGATGTTGGGCACATGCGGTGCCATCGTCAGTGCAATTCAAATGTATCCTTAATTTTATATACGTCTCAATGTTCTATGGTATTTTTTTTATGCATATACATAAATTTTATATACGTCTCGATGTTTTTGGTTTTTTGATCTAAGAAATGTCTCGAAATCGAGCGGGCACTAAAGTGACATCTTTTAAAAGTTTATGTATCATGTTTCCCTTGATGATTTCCTTAGAGGCATAATTGAGCGCAATGAGTTAAAATCCATTCGATGGACAGCCGGAGCAGTAAGGCCTCTTCTCTTTCTCTCTTTAACTCGCACTGTCACACGGCATACCTTCCCTCCTTAGAAAAGTAGTACTTCATAAAGAGAATACCTTTCGGTTTGATAAAGATAAGATGTTTTCATTTGCAACATCAAGCCGAAATGAAAATCCTATGCCAAATGCAAAAATGGGGCGCAGCTAGGAATCCATCAACCTGACATGCTTCTGTTGTTGGTTTCGTCTGTCACTGGATCTTTTATGAAGCCAAGTCGTTTAATCCATATGACTTACTTTTACTTGCCAAAACTTTAGAGATGGGCTGCATAGATGGAGTTTTTAGTGTTAATTTGTGAGATCCCACATTGGAGAGAGTAACGAGTACCAGCAAGGACGCTGGGCCTTGAAGATGGATGGATTGTGAGATCTCACATCGGTTGGGGAGGAGAACGAATCAAAAGGGTGTGAAAACCTCTCTCTAGCAGTCGCATTTTAAAAACCTTGAGTGGAAGTCCATAAAAGAAAGCCCAAAGAGGACAATATCTACCAGCAGTGGGCTTGAGCGGTTACAAATGACAGCAGGTGTGCCAGTGGGGAGGTTGAGTCCTGAAGGGGGATGGACACGAGGCGATGTGCCAGCAAGGACGTTAGGCCCCAAGAGAGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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CGATCATTTCATATGATTATGCTACAATCAAGATTTAATTCCCAAAAGGATAAAACGTGAAATTCCGTTCGCCAACAACAGCTCCGGAAAATCGGCACAATTTATAGATTTCAGATGGTTAAATGCGTTCTCTGACGGCTGCAATAACTCACGTTCAAGTTGGGAAATCTTCTCATCCATTCATCTCTACTGCCCATCTCTTGTTTCCGACTTAAAATTCTTCTCTCTAATCTTGTTTGGGGAAGATAATGAGCAGTTTCAAGGATTTTTGTTCGAAAAAGACCGTAATCGGTCTTGGATTGGGACAATTTTTGTCTCTTCTTACCACTTTCACTGGCTCTGCATCCTCTGAACTCGCGAAAAGAGGAATTAATGCACCGACTTCACAGTCCTTTATAAACTATGTCCTCTTGGCCATTGTCTATGGAAGTATAGTGCTCTACCGTAAGAAAGCACTCAAGGCCAAATGGTACTTCTACGTACCACTAGGATTGGTAGATGTAGAAGCCAACTACCTTGTTGTGAAGGCCTATCAGTACACATCTCTGACAAGTGTCATGCTGCTGGATTGTTGGACAATCCCTTGTGTTATGCTGCTAACCTGGCTTTTCCTGAAAACAAAATACAGATTCAGGAAGATAGCTGGTGTTGTTGTTTGTGTTGCTGGTCTTGTCATGGTCATTTTTTCTGATGTTCATGCTGGTGACCGAGCTGGAGGAACCAGCCCACTTAAAGGGGATGCTCTTGTTATAGCTGCTGCTACCCTTTATGCTGTTACTAATGTCAGCGAGGAATTTCTGGTGAAGAATGCTGATAGAGTTGAGCTAATGGCGATGTTGGGCACATGCGGTGCCATCGTCAGTGCAATTCAAATAGGCATAATTGAGCGCAATGAGTTAAAATCCATTCGATGGACAGCCGGAGCAGCAATTCCTTTTGCTGGATTTTCTGTGGCTATGTTCATGTTTTACTCGCTTGTCCCTGTACTGCTTCAGGTTAGCGGATCCACAATGTTGAACCTCTCTTTACTGACCTCGGACATGTGGTCGATTGTAATTCGTGTCATCGCATATAACGAGATGGTTGATTGGCTTTACTACTTGGCCTTTGCTGTTGTTGTCATTGGACTTATTATTTATTCTGTGGGTGAAAAAGAAGAAGATCAACGTCGAGCTGACATCGCCGATGAAGAATCCGAGCACGACAAACATGCATACAAGAAATGTCCTTCGAGAAACTAGGAACAAGGAACTTCAACCATCAGGTCGGATAGAAAAAATTAGGAAAGAGGTGTCTAATCTAATCTCGATTTAGAGTTCACTTACTCTTTTGTGGGGTTTTTTATGGGCTTATTTTTTTCAACACGTATAACATTGTGGTCGAAAATATGTCTTTACTGTTTATATACGTATACGTAGGTGGACAAATATGTATTTGTTAATTATGC ATGAGCAGTTTCAAGGATTTTTGTTCGAAAAAGACCGTAATCGGTCTTGGATTGGGACAATTTTTGTCTCTTCTTACCACTTTCACTGGCTCTGCATCCTCTGAACTCGCGAAAAGAGGAATTAATGCACCGACTTCACAGTCCTTTATAAACTATGTCCTCTTGGCCATTGTCTATGGAAGTATAGTGCTCTACCGTAAGAAAGCACTCAAGGCCAAATGGTACTTCTACGTACCACTAGGATTGGTAGATGTAGAAGCCAACTACCTTGTTGTGAAGGCCTATCAGTACACATCTCTGACAAGTGTCATGCTGCTGGATTGTTGGACAATCCCTTGTGTTATGCTGCTAACCTGGCTTTTCCTGAAAACAAAATACAGATTCAGGAAGATAGCTGGTGTTGTTGTTTGTGTTGCTGGTCTTGTCATGGTCATTTTTTCTGATGTTCATGCTGGTGACCGAGCTGGAGGAACCAGCCCACTTAAAGGGGATGCTCTTGTTATAGCTGCTGCTACCCTTTATGCTGTTACTAATGTCAGCGAGGAATTTCTGGTGAAGAATGCTGATAGAGTTGAGCTAATGGCGATGTTGGGCACATGCGGTGCCATCGTCAGTGCAATTCAAATAGGCATAATTGAGCGCAATGAGTTAAAATCCATTCGATGGACAGCCGGAGCAGCAATTCCTTTTGCTGGATTTTCTGTGGCTATGTTCATGTTTTACTCGCTTGTCCCTGTACTGCTTCAGGTTAGCGGATCCACAATGTTGAACCTCTCTTTACTGACCTCGGACATGTGGTCGATTGTAATTCGTGTCATCGCATATAACGAGATGGTTGATTGGCTTTACTACTTGGCCTTTGCTGTTGTTGTCATTGGACTTATTATTTATTCTGTGGGTGAAAAAGAAGAAGATCAACGTCGAGCTGACATCGCCGATGAAGAATCCGAGCACGACAAACATGCATACAAGAAATGTCCTTCGAGAAACTAG MSSFKDFCSKKTVIGLGLGQFLSLLTTFTGSASSELAKRGINAPTSQSFINYVLLAIVYGSIVLYRKKALKAKWYFYVPLGLVDVEANYLVVKAYQYTSLTSVMLLDCWTIPCVMLLTWLFLKTKYRFRKIAGVVVCVAGLVMVIFSDVHAGDRAGGTSPLKGDALVIAAATLYAVTNVSEEFLVKNADRVELMAMLGTCGAIVSAIQIGIIERNELKSIRWTAGAAIPFAGFSVAMFMFYSLVPVLLQVSGSTMLNLSLLTSDMWSIVIRVIAYNEMVDWLYYLAFAVVVIGLIIYSVGEKEEDQRRADIADEESEHDKHAYKKCPSRN Homology
BLAST of CmoCh08G000890 vs. ExPASy Swiss-Prot
Match: Q5T1Q4 (Solute carrier family 35 member F1 OS=Homo sapiens OX=9606 GN=SLC35F1 PE=1 SV=2) HSP 1 Score: 225.7 bits (574), Expect = 7.6e-58 Identity = 124/298 (41.61%), Postives = 190/298 (63.76%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy Swiss-Prot
Match: Q8BGK5 (Solute carrier family 35 member F1 OS=Mus musculus OX=10090 GN=Slc35f1 PE=1 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 7.6e-58 Identity = 126/298 (42.28%), Postives = 189/298 (63.42%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy Swiss-Prot
Match: Q8IXU6 (Solute carrier family 35 member F2 OS=Homo sapiens OX=9606 GN=SLC35F2 PE=1 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 9.3e-56 Identity = 120/290 (41.38%), Postives = 184/290 (63.45%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy Swiss-Prot
Match: Q7TML3 (Solute carrier family 35 member F2 OS=Mus musculus OX=10090 GN=Slc35f2 PE=1 SV=2) HSP 1 Score: 213.0 bits (541), Expect = 5.1e-54 Identity = 119/290 (41.03%), Postives = 182/290 (62.76%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy Swiss-Prot
Match: Q0V9U2 (Solute carrier family 35 member F2 OS=Xenopus tropicalis OX=8364 GN=slc35f2 PE=2 SV=2) HSP 1 Score: 201.4 bits (511), Expect = 1.5e-50 Identity = 111/301 (36.88%), Postives = 182/301 (60.47%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy TrEMBL
Match: A0A6J1H7T4 (solute carrier family 35 member F1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461226 PE=3 SV=1) HSP 1 Score: 629.0 bits (1621), Expect = 1.1e-176 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy TrEMBL
Match: A0A6J1KS39 (solute carrier family 35 member F1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498156 PE=3 SV=1) HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169 Identity = 320/330 (96.97%), Postives = 323/330 (97.88%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy TrEMBL
Match: A0A0A0K8A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041160 PE=3 SV=1) HSP 1 Score: 567.4 bits (1461), Expect = 3.9e-158 Identity = 295/331 (89.12%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy TrEMBL
Match: A0A1S4DVU1 (solute carrier family 35 member F1-like OS=Cucumis melo OX=3656 GN=LOC103488648 PE=3 SV=1) HSP 1 Score: 564.3 bits (1453), Expect = 3.3e-157 Identity = 293/331 (88.52%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of CmoCh08G000890 vs. ExPASy TrEMBL
Match: A0A5A7V517 (Solute carrier family 35 member F1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00610 PE=3 SV=1) HSP 1 Score: 564.3 bits (1453), Expect = 3.3e-157 Identity = 293/331 (88.52%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of CmoCh08G000890 vs. NCBI nr
Match: XP_022960511.1 (solute carrier family 35 member F1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 629.0 bits (1621), Expect = 2.3e-176 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0
BLAST of CmoCh08G000890 vs. NCBI nr
Match: KAG6592880.1 (Solute carrier family 35 member F1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 622.9 bits (1605), Expect = 1.6e-174 Identity = 328/330 (99.39%), Postives = 328/330 (99.39%), Query Frame = 0
BLAST of CmoCh08G000890 vs. NCBI nr
Match: XP_023513440.1 (solute carrier family 35 member F1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 617.5 bits (1591), Expect = 6.9e-173 Identity = 325/330 (98.48%), Postives = 326/330 (98.79%), Query Frame = 0
BLAST of CmoCh08G000890 vs. NCBI nr
Match: XP_023005047.1 (solute carrier family 35 member F1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 605.1 bits (1559), Expect = 3.5e-169 Identity = 320/330 (96.97%), Postives = 323/330 (97.88%), Query Frame = 0
BLAST of CmoCh08G000890 vs. NCBI nr
Match: XP_011656528.1 (solute carrier family 35 member F1 [Cucumis sativus] >XP_031743416.1 solute carrier family 35 member F1 [Cucumis sativus] >KGN45980.1 hypothetical protein Csa_005531 [Cucumis sativus]) HSP 1 Score: 567.4 bits (1461), Expect = 8.1e-158 Identity = 295/331 (89.12%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of CmoCh08G000890 vs. TAIR 10
Match: AT3G59310.1 (Eukaryotic protein of unknown function (DUF914) ) HSP 1 Score: 419.1 bits (1076), Expect = 3.3e-117 Identity = 207/312 (66.35%), Postives = 256/312 (82.05%), Query Frame = 0
BLAST of CmoCh08G000890 vs. TAIR 10
Match: AT3G59340.1 (Eukaryotic protein of unknown function (DUF914) ) HSP 1 Score: 408.7 bits (1049), Expect = 4.5e-114 Identity = 202/311 (64.95%), Postives = 254/311 (81.67%), Query Frame = 0
BLAST of CmoCh08G000890 vs. TAIR 10
Match: AT3G59310.2 (Eukaryotic protein of unknown function (DUF914) ) HSP 1 Score: 402.9 bits (1034), Expect = 2.5e-112 Identity = 207/343 (60.35%), Postives = 256/343 (74.64%), Query Frame = 0
BLAST of CmoCh08G000890 vs. TAIR 10
Match: AT3G59320.1 (Eukaryotic protein of unknown function (DUF914) ) HSP 1 Score: 392.5 bits (1007), Expect = 3.3e-109 Identity = 194/313 (61.98%), Postives = 256/313 (81.79%), Query Frame = 0
BLAST of CmoCh08G000890 vs. TAIR 10
Match: AT3G59320.2 (Eukaryotic protein of unknown function (DUF914) ) HSP 1 Score: 273.9 bits (699), Expect = 1.7e-73 Identity = 134/216 (62.04%), Postives = 177/216 (81.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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