CmoCh07G010300 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G010300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	dof zinc finger protein 4-like
Location	Cmo_Chr07: 5100192 .. 5102189 (+)
RNA-Seq Expression	CmoCh07G010300
Synteny	CmoCh07G010300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGAAATTTTCTCTCTCCCCTCTCACCCTCTTTCTCTCTCTCTAAAAAACCCATCAATTTTTTTGAAGAACAATGGCATTTCCATCCATCATCCCATCAAATTTTGAAGAACAGGTAACCATTTCATTTCTTAATTTCTTCCCTTCAAAATTTTATTAATTGAAGACTATTTTGGTTTTCAGACGGTGTCGCCGCCGCCGGCGCTGCCACAAGGGCGGCCTGAGTCGATGACGGATCCGGCACGGTTGAAGTGCCCGAGATGTGAATCAAGAAACACCAAGTTTTGTTACTTCAACAACTATAGCCTGTCTCAACCCCGCCACTTCTGTAAGACCTGCCGCCGGTACTGGACCAGAGGCGGCGCTCTGAGAAGCGTCCCGGTAGGTGGTGGCTACCGCCGGAATAATAATAAAAGAACCAAAAGTGCGTCCAAATCTCCGGTTAACTCCCCATGCCAATCTTCTACTACTGCTGCAGCTGGTAATCATATCAACTCATGACGAAGCTTAATTCTTTTATTGAATCATCATTTTTATTTTATTATTATTATTATTATTTTAATTTTAGGATGTTTTTCACTTTTTATACCAACTTTTTAGCTCAATTTATTAAGATGTTTTATATATTTTTTTTAGGAAAAATAAAATTATCCATTAAAAAAATTGAAAAGAATATATGTGTGTAGTGTGGATTTTTTGTCGGAACCCGATTTCTATAAAAATAAATAGATAATTTTGTAGGGATGAAAAAATGAAATAGGAGGTGGGGACAAGGACGGGAAGGCTTTTTCGTCTCTATCTCGCCCCGTAGACATCTCTAGTTATCATGACCCTAAATTTTCTATTTAATCTAAGACCGGTACTGTACACATATCATGAACCTACATAGTTTCAACTAAGCCTAAATCGATAAAATTAGAGATCCCACATTGATTGGGGAGGAGAACGAAGCATTCCTTATAATGGTGTGGAAACCTCTCACTAGCAAACGTGTTTTAAAAATAGAGGGAAAGTCTGGAAGTGTAACGACCCAAGCTCACCGCTAGCATATATTGTCTTCTTTGGGCTTTCCCTCAAGACTTTAAAATGCGTCTATTAGGAAAATGTTTCAACACCCTTAATTCTTCGTTCTCCTCTGCAATCGATGTGGGATCTCTAATTTTATCGATGTAGGCTTAGTTGAAATTATGTAGGTTCATGATATGTGTACAGTATGAGTCTTAGGTTAAGTAGAAAATTTAGAGTCGTTACACCTAGAGATGTCATAGGGAAAGATAGAGACGAAAAAGCCTTCATGTCCTCGTCCACCCCTCTTATTTCATTTTTCATCCCCACAAAATTATCTATTTATTTTTGTAGGAATTGGATTCCTGTCTTTATTTGTCGAGGATAATCAATCGAGATTTGAGCGTTTGATACTCGTTACAACGTTTTAACTAGTTAAACTATAAAATATTTGGAAACCTAGATGAACTAACATAGTTTTGAGCAGGAGAAGCAATGAGATTAAATTACAATGCGATTAGTACACAAAATGAAGGAGGCAAGGGTTCAAGTTATCCCATTGGGATGGCCAACTTTTTAGGGTTGGATCAACATCAATGGCGGCCACAACAGCTTCAGCTTCACCAATTGCAACCAGCTCGGTTGCTCAGAAATAATGTCGTCGAGGCATCGTCGAGCTATAACGTGGTCGGGCAACAAAAGGTTAACAACAACAACGTGGGGAAGCCATTTTGGGGAGTTGTTGCAGGAAGTGATCGCCATTGTTGGACTGCTTTTAATCCTTCATCTTCTTCCCATTCTTAAATATGAGAGACTTTTATGTTTTTTTTTCTTTCTTAAGCATAGATTTTATTTTTGTAAGCAAATTAGGGTTTCATGTTGAACAACTCTTTTAAGTAGTTTTTATATGTGATGAGTGTTGTCTAAAATTTTTAATTAGGGAAAATAACATATTCAATTTTATATTTACATTAAAGAAAAAAAAGAAGAGAG

mRNA sequence

AATGAAATTTTCTCTCTCCCCTCTCACCCTCTTTCTCTCTCTCTAAAAAACCCATCAATTTTTTTGAAGAACAATGGCATTTCCATCCATCATCCCATCAAATTTTGAAGAACAGACGGTGTCGCCGCCGCCGGCGCTGCCACAAGGGCGGCCTGAGTCGATGACGGATCCGGCACGGTTGAAGTGCCCGAGATGTGAATCAAGAAACACCAAGTTTTGTTACTTCAACAACTATAGCCTGTCTCAACCCCGCCACTTCTGTAAGACCTGCCGCCGGTACTGGACCAGAGGCGGCGCTCTGAGAAGCGTCCCGGTAGGTGGTGGCTACCGCCGGAATAATAATAAAAGAACCAAAAGTGCGTCCAAATCTCCGGTTAACTCCCCATGCCAATCTTCTACTACTGCTGCAGCTGGAGAAGCAATGAGATTAAATTACAATGCGATTAGTACACAAAATGAAGGAGGCAAGGGTTCAAGTTATCCCATTGGGATGGCCAACTTTTTAGGGTTGGATCAACATCAATGGCGGCCACAACAGCTTCAGCTTCACCAATTGCAACCAGCTCGGTTGCTCAGAAATAATGTCGTCGAGGCATCGTCGAGCTATAACGTGGTCGGGCAACAAAAGGTTAACAACAACAACGTGGGGAAGCCATTTTGGGGAGTTGTTGCAGGAAGTGATCGCCATTGTTGGACTGCTTTTAATCCTTCATCTTCTTCCCATTCTTAAATATGAGAGACTTTTATGTTTTTTTTTCTTTCTTAAGCATAGATTTTATTTTTGTAAGCAAATTAGGGTTTCATGTTGAACAACTCTTTTAAGTAGTTTTTATATGTGATGAGTGTTGTCTAAAATTTTTAATTAGGGAAAATAACATATTCAATTTTATATTTACATTAAAGAAAAAAAAGAAGAGAG

Coding sequence (CDS)

ATGGCATTTCCATCCATCATCCCATCAAATTTTGAAGAACAGACGGTGTCGCCGCCGCCGGCGCTGCCACAAGGGCGGCCTGAGTCGATGACGGATCCGGCACGGTTGAAGTGCCCGAGATGTGAATCAAGAAACACCAAGTTTTGTTACTTCAACAACTATAGCCTGTCTCAACCCCGCCACTTCTGTAAGACCTGCCGCCGGTACTGGACCAGAGGCGGCGCTCTGAGAAGCGTCCCGGTAGGTGGTGGCTACCGCCGGAATAATAATAAAAGAACCAAAAGTGCGTCCAAATCTCCGGTTAACTCCCCATGCCAATCTTCTACTACTGCTGCAGCTGGAGAAGCAATGAGATTAAATTACAATGCGATTAGTACACAAAATGAAGGAGGCAAGGGTTCAAGTTATCCCATTGGGATGGCCAACTTTTTAGGGTTGGATCAACATCAATGGCGGCCACAACAGCTTCAGCTTCACCAATTGCAACCAGCTCGGTTGCTCAGAAATAATGTCGTCGAGGCATCGTCGAGCTATAACGTGGTCGGGCAACAAAAGGTTAACAACAACAACGTGGGGAAGCCATTTTGGGGAGTTGTTGCAGGAAGTGATCGCCATTGTTGGACTGCTTTTAATCCTTCATCTTCTTCCCATTCTTAA

Protein sequence

MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLNYNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNVVGQQKVNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS

Homology

[Close]

BLAST of CmoCh07G010300 vs. ExPASy Swiss-Prot
Match: Q9M2U1 (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 6.0e-27
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPA----LPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNN 67
           P+N+  Q  SPP +      Q R  SM + AR          L CPRC+S NTKFCYFNN
Sbjct: 34  PNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNN 93

Query: 68  YSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAA 114
           YSL+QPRHFCKTCRRYWTRGG+LR+VPVGGG+RR  NKR+KS SKS V     ++T+ ++
Sbjct: 94  YSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRR--NKRSKSRSKSTVVVSTDNTTSTSS 151

[Close]

BLAST of CmoCh07G010300 vs. ExPASy Swiss-Prot
Match: O80928 (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 65/103 (63.11%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 34  ARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRT 93
           A LKCPRCES NTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALR+VPVGGG RR  N+RT
Sbjct: 87  AALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR--NRRT 146

Query: 94  KSASKSPVNSPCQSSTTA-AAGEAMRLNYNAISTQNEGGKGSS 136
           KS S +  NS   S+ T+ ++G A  +  + I + + GG   S
Sbjct: 147 KSNSNNNNNSTATSNNTSFSSGNASTI--STILSSHYGGNQES 185

[Close]

BLAST of CmoCh07G010300 vs. ExPASy Swiss-Prot
Match: Q9LZ56 (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-25
Identity = 68/110 (61.82%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 20  PALPQG--RPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR 79
           P  P G  RP SM + AR          LKCPRC+S NTKFCYFNNYSL+QPRHFCK CR
Sbjct: 67  PGGPGGLIRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACR 126

Query: 80  RYWTRGGALRSVPVGGGYRRNNNKRTKSA------SKSPVNSPCQSSTTA 112
           RYWTRGGALRSVPVGGG RR  NKRTK++      S S  NS  Q S T+
Sbjct: 127 RYWTRGGALRSVPVGGGCRR--NKRTKNSSGGGGGSTSSGNSKSQDSATS 174

[Close]

BLAST of CmoCh07G010300 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 7.3e-25
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 24  QGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGG 83
           Q +     +  +LKCPRC+S NTKFCY+NNY+LSQPRHFCK+CRRYWT+GGALR+VPVGG
Sbjct: 17  QQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGG 76

Query: 84  GYRRNNNKRTKSASKSPVNSPCQSS 109
           G R+N  KR+ S+S S  +SP  SS
Sbjct: 77  GSRKNATKRSTSSSSS-ASSPSNSS 100

[Close]

BLAST of CmoCh07G010300 vs. ExPASy Swiss-Prot
Match: Q6Z345 (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24
Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 23  PQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVG 82
           P  R   +  P  +KCPRCES NTKFCY+NNY+LSQPRHFCK+CRRYWT+GG LR+VPVG
Sbjct: 32  PASRCGGIPSPEAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVG 91

Query: 83  GGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLNYNAIST--QNEGGKGSSYPIGM 142
           GG R+     + SA+ S  ++P     TAA   A      + S+   + GG G++ P   
Sbjct: 92  GGCRKTKRSGSSSAASSAPSTP-----TAATDNAKNQRRASASSPRSSSGGSGNTSPTAA 147

[Close]

BLAST of CmoCh07G010300 vs. ExPASy TrEMBL
Match: A0A6J1HF83 (dof zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111463431 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.0e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60
           MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60

Query: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLN 120
           HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLN
Sbjct: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLN 120

Query: 121 YNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNV 180
           YNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNV
Sbjct: 121 YNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNV 180

Query: 181 VGQQKVNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 219
           VGQQKVNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS
Sbjct: 181 VGQQKVNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 218

[Close]

BLAST of CmoCh07G010300 vs. ExPASy TrEMBL
Match: A0A6J1ICK3 (dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111471291 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 213/221 (96.38%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVS--PPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ 60
           MAFPSIIPSNFEEQTVS  PPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ 60

Query: 61  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMR 120
           PRHFCKTCRRYWTRGGALRSVPVGGGYRRN+NKRTKSASKSPVNSP QSSTTAAAGEAMR
Sbjct: 61  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNSNKRTKSASKSPVNSPSQSSTTAAAGEAMR 120

Query: 121 LNYNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSY 180
           LNYNAISTQ EGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLL NNV+EASSSY
Sbjct: 121 LNYNAISTQIEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLGNNVIEASSSY 180

Query: 181 NVVGQQKV-NNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 219
           NVVGQQKV NNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS
Sbjct: 181 NVVGQQKVNNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 221

[Close]

BLAST of CmoCh07G010300 vs. ExPASy TrEMBL
Match: A0A5A7SP42 (Dof zinc finger protein DOF5.1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00150 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.4e-64
Identity = 155/245 (63.27%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 17  SPPPALPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFCKTC 76
           SPPP+  Q RP SM D AR          LKCPRCES NTKFCYFNNYSLSQPRHFCKTC
Sbjct: 44  SPPPS--QVRPGSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTC 103

Query: 77  RRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTT-AAAGEAMRLNY-NAI 136
           RRYWTRGGALRSVPVGGGYRR NNKRTKS+SKSPVNS CQ +TT  +AGEAMRLNY NAI
Sbjct: 104 RRYWTRGGALRSVPVGGGYRR-NNKRTKSSSKSPVNSQCQPTTTEPSAGEAMRLNYNNAI 163

Query: 137 STQNEGGKGSS-------YPIGMANFLGLDQHQWRPQQLQLHQ-LQP-------ARLLRN 196
           ST NEG   S+       +PIG++NFLG DQ QWRP QLQLHQ  QP       ARLL N
Sbjct: 164 STPNEGAVDSTHHHHHHHHPIGISNFLGFDQIQWRP-QLQLHQTTQPSSLVANSARLLGN 223

Query: 197 NVVEASSSYNVV-----------------GQQKVNNNNVGKPFWGVVAGSD-RHCWTAFN 217
             + +S SY++V                 GQQ    NNVGKPFWGVV G+D RH W  FN
Sbjct: 224 GGINSSLSYSIVGEIQKKMDATTTKMEEDGQQVAEVNNVGKPFWGVVGGNDNRHYWNGFN 283

[Close]

BLAST of CmoCh07G010300 vs. ExPASy TrEMBL
Match: A0A1S3BI28 (dof zinc finger protein DOF5.1-like OS=Cucumis melo OX=3656 GN=LOC103490127 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.4e-64
Identity = 155/245 (63.27%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 17  SPPPALPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFCKTC 76
           SPPP+  Q RP SM D AR          LKCPRCES NTKFCYFNNYSLSQPRHFCKTC
Sbjct: 44  SPPPS--QVRPGSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTC 103

Query: 77  RRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTT-AAAGEAMRLNY-NAI 136
           RRYWTRGGALRSVPVGGGYRR NNKRTKS+SKSPVNS CQ +TT  +AGEAMRLNY NAI
Sbjct: 104 RRYWTRGGALRSVPVGGGYRR-NNKRTKSSSKSPVNSQCQPTTTEPSAGEAMRLNYNNAI 163

Query: 137 STQNEGGKGSS-------YPIGMANFLGLDQHQWRPQQLQLHQ-LQP-------ARLLRN 196
           ST NEG   S+       +PIG++NFLG DQ QWRP QLQLHQ  QP       ARLL N
Sbjct: 164 STPNEGAVDSTHHHHHHHHPIGISNFLGFDQIQWRP-QLQLHQTTQPSSLVANSARLLGN 223

Query: 197 NVVEASSSYNVV-----------------GQQKVNNNNVGKPFWGVVAGSD-RHCWTAFN 217
             + +S SY++V                 GQQ    NNVGKPFWGVV G+D RH W  FN
Sbjct: 224 GGINSSLSYSIVGEIQKKMDATTTKMEEDGQQVAEVNNVGKPFWGVVGGNDNRHYWNGFN 283

[Close]

BLAST of CmoCh07G010300 vs. ExPASy TrEMBL
Match: A0A6J1ILP5 (dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111478150 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.4e-63
Identity = 147/222 (66.22%), Postives = 160/222 (72.07%), Query Frame = 0


Query: 14  QTVSPPPALPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFC 73
           Q VSPP A PQ RPESM D AR          LKCPRCES NTKFCYFNNYSLSQPRHFC
Sbjct: 32  QLVSPPRAPPQVRPESMVDRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFC 91

Query: 74  KTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTA--AAGEAMRLNY 133
           KTCRRYWTRGGALRSVPVGGGYRR NNKRTKS SKSPVNS CQ +TT   + GE MRLNY
Sbjct: 92  KTCRRYWTRGGALRSVPVGGGYRR-NNKRTKSTSKSPVNSQCQPTTTTELSGGETMRLNY 151

Query: 134 NAISTQNEGGKGSSY-PIGMANFLGLDQHQWRPQQLQLHQLQPARLLRN--NVVEASSSY 193
                QNEG   S++ PIG+ +FLG DQ QWRP QLQLH+ QPARLL N     +ASSSY
Sbjct: 152 ----IQNEGVMNSTHPPIGITSFLGFDQIQWRP-QLQLHRAQPARLLGNGGGGDDASSSY 211

Query: 194 NVVGQQKVNNN----NVGKPFWGVVAGSDRHCWTAFNPSSSS 217
           ++VG+ +  +     NVGKPFW      DRH W AFNPSSSS
Sbjct: 212 SIVGKMEAEDGEHHVNVGKPFW------DRHYWNAFNPSSSS 241

[Close]

BLAST of CmoCh07G010300 vs. NCBI nr
Match: XP_022963131.1 (dof zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 447.6 bits (1150), Expect = 6.2e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60
           MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60

Query: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLN 120
           HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLN
Sbjct: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLN 120

Query: 121 YNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNV 180
           YNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNV
Sbjct: 121 YNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNV 180

Query: 181 VGQQKVNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 219
           VGQQKVNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS
Sbjct: 181 VGQQKVNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 218

[Close]

BLAST of CmoCh07G010300 vs. NCBI nr
Match: XP_022972784.1 (dof zinc finger protein DOF3.6-like [Cucurbita maxima])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 213/221 (96.38%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVS--PPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ 60
           MAFPSIIPSNFEEQTVS  PPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ 60

Query: 61  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMR 120
           PRHFCKTCRRYWTRGGALRSVPVGGGYRRN+NKRTKSASKSPVNSP QSSTTAAAGEAMR
Sbjct: 61  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNSNKRTKSASKSPVNSPSQSSTTAAAGEAMR 120

Query: 121 LNYNAISTQNEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSY 180
           LNYNAISTQ EGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLL NNV+EASSSY
Sbjct: 121 LNYNAISTQIEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLGNNVIEASSSY 180

Query: 181 NVVGQQKV-NNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 219
           NVVGQQKV NNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS
Sbjct: 181 NVVGQQKVNNNNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 221

[Close]

BLAST of CmoCh07G010300 vs. NCBI nr
Match: KAG7027323.1 (Dof zinc finger protein DOF3.6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.4 bits (1056), Expect = 4.9e-111
Identity = 202/205 (98.54%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 15  TVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 74
           TVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR+YWTRGG
Sbjct: 1   TVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRQYWTRGG 60

Query: 75  ALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLNYNAISTQNEGGKGS 134
           ALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLNYNAISTQNEGGKGS
Sbjct: 61  ALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLNYNAISTQNEGGKGS 120

Query: 135 SYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNVVGQQKV-NNNNVGK 194
           SYPIGMANFLGLDQHQWRPQQLQLHQLQPARLL NNVVEASSSYNVVGQQKV NNNNVGK
Sbjct: 121 SYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLGNNVVEASSSYNVVGQQKVNNNNNVGK 180

Query: 195 PFWGVVAGSDRHCWTAFNPSSSSHS 219
           PFWGVVAGSDRHCWTAFNPSSSSHS
Sbjct: 181 PFWGVVAGSDRHCWTAFNPSSSSHS 205

[Close]

BLAST of CmoCh07G010300 vs. NCBI nr
Match: XP_023517155.1 (dof zinc finger protein DOF2.4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.9 bits (995), Expect = 5.8e-104
Identity = 194/211 (91.94%), Postives = 195/211 (92.42%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR 67
           PSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR
Sbjct: 4   PSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR 63

Query: 68  RYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGEAMRLNYNAISTQ 127
           RYWTRGGALRSVPVGGGYRRN       ASKSPVNSPCQSSTTAAAGE MRLNYNAISTQ
Sbjct: 64  RYWTRGGALRSVPVGGGYRRN-------ASKSPVNSPCQSSTTAAAGEGMRLNYNAISTQ 123

Query: 128 NEGGKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLRNNVVEASSSYNVVGQQKVN 187
           NEG KGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLL NNVVEASSSYN+VGQQKV 
Sbjct: 124 NEGVKGSSYPIGMANFLGLDQHQWRPQQLQLHQLQPARLLGNNVVEASSSYNMVGQQKVK 183

Query: 188 NNNVGKPFWGVVAGSDRHCWTAFNPSSSSHS 219
               GKP WGVVAGSDRHCWTAFNPSSSSHS
Sbjct: 184 E---GKPLWGVVAGSDRHCWTAFNPSSSSHS 204

[Close]

BLAST of CmoCh07G010300 vs. NCBI nr
Match: XP_038877650.1 (dof zinc finger protein DOF5.1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 8.8e-68
Identity = 159/246 (64.63%), Postives = 175/246 (71.14%), Query Frame = 0


Query: 9   SNFEEQTVSPPPALPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQ 68
           SNF+  +  PPP  PQ RP SM + AR          LKCPRCES NTKFCYFNNYSLSQ
Sbjct: 37  SNFQLISPPPPPPPPQVRPGSMAERARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQ 96

Query: 69  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTT-AAAGEAM 128
           PRHFCKTCRRYWTRGGALRSVPVGGGYRR NNKR+KS SKSPVNS  Q +TT  +AGEAM
Sbjct: 97  PRHFCKTCRRYWTRGGALRSVPVGGGYRR-NNKRSKSTSKSPVNSQSQPTTTELSAGEAM 156

Query: 129 RLNY-NAISTQNEGGKGSS-YPIGMANFLGLDQHQWRPQQLQLHQLQP-------ARLLR 188
           RLNY NAIST NEG   S+ +PIG+ANFLG DQ QWRP QLQLHQ  P       ARLL 
Sbjct: 157 RLNYNNAISTPNEGALDSTHHPIGIANFLGFDQIQWRP-QLQLHQTHPSPLLANSARLLG 216

Query: 189 NNVVEASSSYNVVGQ---------QKVNNN------NVGKPFWGVVAGSD-RHCWTAFNP 219
           N  ++ASSSY++VGQ          K+  +      NVGKPFWGVV GSD RH W+ FNP
Sbjct: 217 NGGIDASSSYSIVGQIQKKMAETTTKMEEDGQQVEVNVGKPFWGVVGGSDHRHYWSGFNP 276

[Close]

BLAST of CmoCh07G010300 vs. TAIR 10
Match: AT3G55370.1 (OBF-binding protein 3 )

HSP 1 Score: 122.5 bits (306), Expect = 4.3e-28
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPA----LPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNN 67
           P+N+  Q  SPP +      Q R  SM + AR          L CPRC+S NTKFCYFNN
Sbjct: 34  PNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNN 93

Query: 68  YSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAA 114
           YSL+QPRHFCKTCRRYWTRGG+LR+VPVGGG+RR  NKR+KS SKS V     ++T+ ++
Sbjct: 94  YSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRR--NKRSKSRSKSTVVVSTDNTTSTSS 151

[Close]

BLAST of CmoCh07G010300 vs. TAIR 10
Match: AT3G55370.2 (OBF-binding protein 3 )

HSP 1 Score: 122.5 bits (306), Expect = 4.3e-28
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPA----LPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNN 67
           P+N+  Q  SPP +      Q R  SM + AR          L CPRC+S NTKFCYFNN
Sbjct: 34  PNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNN 93

Query: 68  YSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAA 114
           YSL+QPRHFCKTCRRYWTRGG+LR+VPVGGG+RR  NKR+KS SKS V     ++T+ ++
Sbjct: 94  YSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRR--NKRSKSRSKSTVVVSTDNTTSTSS 151

[Close]

BLAST of CmoCh07G010300 vs. TAIR 10
Match: AT3G55370.3 (OBF-binding protein 3 )

HSP 1 Score: 122.5 bits (306), Expect = 4.3e-28
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPA----LPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNN 67
           P+N+  Q  SPP +      Q R  SM + AR          L CPRC+S NTKFCYFNN
Sbjct: 79  PNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNN 138

Query: 68  YSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAA 114
           YSL+QPRHFCKTCRRYWTRGG+LR+VPVGGG+RR  NKR+KS SKS V     ++T+ ++
Sbjct: 139 YSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRR--NKRSKSRSKSTVVVSTDNTTSTSS 196

[Close]

BLAST of CmoCh07G010300 vs. TAIR 10
Match: AT2G37590.1 (DNA binding with one finger 2.4 )

HSP 1 Score: 121.3 bits (303), Expect = 9.5e-28
Identity = 65/103 (63.11%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 34  ARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRT 93
           A LKCPRCES NTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALR+VPVGGG RR  N+RT
Sbjct: 87  AALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR--NRRT 146

Query: 94  KSASKSPVNSPCQSSTTA-AAGEAMRLNYNAISTQNEGGKGSS 136
           KS S +  NS   S+ T+ ++G A  +  + I + + GG   S
Sbjct: 147 KSNSNNNNNSTATSNNTSFSSGNASTI--STILSSHYGGNQES 185

[Close]

BLAST of CmoCh07G010300 vs. TAIR 10
Match: AT5G02460.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-26
Identity = 68/110 (61.82%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 20  PALPQG--RPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR 79
           P  P G  RP SM + AR          LKCPRC+S NTKFCYFNNYSL+QPRHFCK CR
Sbjct: 67  PGGPGGLIRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACR 126

Query: 80  RYWTRGGALRSVPVGGGYRRNNNKRTKSA------SKSPVNSPCQSSTTA 112
           RYWTRGGALRSVPVGGG RR  NKRTK++      S S  NS  Q S T+
Sbjct: 127 RYWTRGGALRSVPVGGGCRR--NKRTKNSSGGGGGSTSSGNSKSQDSATS 174

The following BLAST results are available for this feature:

BLAST of CmoCh07G010300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2U1	6.0e-27	55.83	Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV...	[more]
O80928	1.3e-26	63.11	Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV...	[more]
Q9LZ56	2.5e-25	61.82	Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV...	[more]
Q94AR6	7.3e-25	63.53	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]
Q6Z345	1.3e-24	48.76	Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 ...	[more]

BLAST of CmoCh07G010300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HF83	3.0e-122	100.00	dof zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111463431 PE=...	[more]
A0A6J1ICK3	1.2e-115	96.38	dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111471291 ...	[more]
A0A5A7SP42	6.4e-64	63.27	Dof zinc finger protein DOF5.1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BI28	6.4e-64	63.27	dof zinc finger protein DOF5.1-like OS=Cucumis melo OX=3656 GN=LOC103490127 PE=4...	[more]
A0A6J1ILP5	1.4e-63	66.22	dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111478150 ...	[more]

BLAST of CmoCh07G010300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963131.1	6.2e-122	100.00	dof zinc finger protein 4-like [Cucurbita moschata]	[more]
XP_022972784.1	2.5e-115	96.38	dof zinc finger protein DOF3.6-like [Cucurbita maxima]	[more]
KAG7027323.1	4.9e-111	98.54	Dof zinc finger protein DOF3.6, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023517155.1	5.8e-104	91.94	dof zinc finger protein DOF2.4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038877650.1	8.8e-68	64.63	dof zinc finger protein DOF5.1-like isoform X1 [Benincasa hispida]	[more]

BLAST of CmoCh07G010300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55370.1	4.3e-28	55.83	OBF-binding protein 3	[more]
AT3G55370.2	4.3e-28	55.83	OBF-binding protein 3	[more]
AT3G55370.3	4.3e-28	55.83	OBF-binding protein 3	[more]
AT2G37590.1	9.5e-28	63.11	DNA binding with one finger 2.4	[more]
AT5G02460.1	1.8e-26	61.82	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 36..90 e-value: 1.8E-30 score: 104.8
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 38..74
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 36..90 score: 28.583717
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..109
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 32..159
None	No IPR available	PANTHER	PTHR31992:SF227	DOF ZINC FINGER PROTEIN DOF2.4-LIKE	coord: 32..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G010300.1	CmoCh07G010300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding