CmoCh07G005880 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G005880
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Rhamnogalacturonan endolyase
Location	Cmo_Chr07: 2657026 .. 2660326 (-)
RNA-Seq Expression	CmoCh07G005880
Synteny	CmoCh07G005880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAAAGACAGAAGAAGAAGCACACAGCCATGGATTTGGAAGCTTGAGCTCTCATCAATGGCGCTCCTTCTCTTATTCATCTTCACTTTATCGCTCGCCAAAGCACTGCCACAACAGCAGCATTCGTCCCCGCCGTTGGCACCCGACGTAGCCCTACAATGGCAGATTCGTGGACAGGTGCCAATCCTTCTTCTTCCTATATTTTTATTGCTTTATTACAAATGATTTCGTGTGACATCTTAAGTCCATTACTAATAGATATTGTCTTTTTTAGATTTTTTTTTAAAGATTTTTAAAATGCGTATGTGTGGTTCTCCGCCGCTAGCAGATATTGTCCTCTTTTAAACTTCCTCTCACTCGTTTTTAAAACACGTTTGTGTCATTTTTAGACTTTTACTCAAGGTTTTAAAATGCATGAGTGTGTTTCTATCCCCTTGTAAGAAATGTTTTGTTTTCCCCATCAATCCACCTTCTTCGGAGTCCAGCATTTTTACTTACATTCATTCCTTTCTCCAATCACTTTCTCTTTGAGCTTTTCCTTTCGGACTTCCTCTCAAAGTTTAAAAAACAAGTCTGTTGGGAAGAGGTTTCTATACTTAAATGCTTTGTTCTCTCCTCCAAACTATGAGATATCAGTGCCAATCTTAAATTATTTAACCATATAGTTTTTCTAATCATTGAAATTTTGCTAATAATCTCTGTCCAGGTGGCAATTGACAATGGGTTGATTCGAGTCACTTTTTCTCACGAAGGCAACGTTATTGGCATAAAATACAATAACATGGATAACATACTTGATTTTCACAATGCATACAATAACAGAGCGTAAATATCTAAATTTTTCTCTTATTATTATTATTATTATTACATTATAATATTCTTATAATTAGACTAAATTTATTATCGACATGTCGCGTAGATATTTGGATTTGGCTTGGAACACCCCAAATCAGACAAGTATTATTGAAAGGTAAATACGAAAAATATAAATTACATAAATAAATCCGTTTATTTAATTTTATAAGAAAAAAAATGAAAAAAATAAATATTTAAACTTTAGAACGGTATATTTACAGAGTAAAGGCAACCAATGTGAAGGTGGTTACAGCCACCGGTGACCAAATAGAGCTTTCATTCACCAGATATTGGAATTCTTCCGACCCTTTTTCAGTCCCTTCGAACATAGATCAGAGGTATTCCCCTTCCTATATTATGAAGAGTCGTAATTCCTAACAATATTGTGGAGAGTCGTAATTCCTAACAATAATTAATTTATTATTATCAGGTATATTTTGAGACGGGGCGATTCTGGATATTATACATATAGCATATTTGAACGGCTGGAAAATTGGCCTGAACTTGGAGTGGACGAGATCAGAATCGCCTACAAAGCCCTAAGAGACAAGTTAGTTTTGCCACGTCATGTTTTGTCATCCCTTGTTTATAGAATTATATTATTAATTTTGTGATGATTTGATGTAATTCTCAACGGTCAGATTTCATTACATGGCGATATCGGACGATCGACAGAGGATCATGCCCACGCAACTGGACCGGATGACTGGGCAGCGTCTCGCTTACGCGGAGGCGGTTCTCATAACCCAACCCACCAACCCGGACCTCAAAGGAGAGGTATAGTTTTATTTTATTTATACAAATATAAAGTATAATTTTTTATTTTTATGCAATGGGGGTATGATTGAGTGCGATGCAGGTGGACGATAAGTACCAGTACTCGCAAGAGAATATGGAGAACAGGGTGCATGGATGGGTGTCTAGGGACCCAAACGTGGGGTTCTGGATGATCACGGCCAGTGATGAGTTTCGTTCGGGGGGGCCGGTCAAGCAAGAACTCACATCCCACGTTGGCCCCACAACTCTTACGGTAAGCCATGCACACCCGATTTCAAAATTTTATTTTGTAATTATGTTTAATTAAATCAAATATATGATTTATTGTTTATAATTTAAAGGTGTTCAAGAGTAATCATTATGCGGGTAAGGATGCTTCGATGAGATTTAAGGAGGGAGAAGCATGGAAAAAGGTTTTGGGCCCGGTTTTCATTTATCTAAACTCGGACCCGACCGGCACTGAAACCCCGGGTTCACTATGGGAAGATGCTAAAAACCAGATGAGGATAGAGAGGGGGAAGTGGCCGTATGGGTTCGTCGAGTCGAAAGAATTTCCATGCTCAGAGGAAAGAGGCAGCGTTAGTGGCCGATTAATGGTCCGAGATAGGTTCGTGGGCCTCCCTCGCTGTCTTTGTCTAATTATAATTATGTTATTAAGGATAAACGACATCGTTTTTGTTTTGGGCCAGATTCGCCAAGAAGGGGCAAATGTGGGCCGATTCTGCGTTTGTGGGCCTCGCAGCTCCCGGGGAAGTGGGGTCTTGGCAAACTGAGAGCAAGGTCAAATTTAATTTTATATTTTTTTCTTTTAAATTTTAATATTTATATTTTTCCTTTTGATGAAACTGACAATCGACTTAATCCATAGGGGTATCAATTTTGGACACGAGCGGATCAAGATGGAAATTTCTTCATTCAAAATATAAGGCCAGGAAACTACAATCTCTACGCATGGGTACCCGGCGTCATTGGCGATTACAAGTACGACGGCGACGTCACCGTCACGGCGGCGAGTTCCACTAACCTGAGTGTGCTGATTTACGACCCACCACGACGAGGCCCAACTCTGTGGGAGATCGGCATCCCTGACCGGAAGGCAGCCGAGTTCTACATACCGGATCCTGAACCCACCTTAATGAGCCACTTTTACAACAACACCAAAATTCAAAACCCAGATAAGTTCCGGCAGTACGGTATCTGGGCACGCTACGCTGATTTGTACCCTGATCAGGATCTGGTGTACAACGTTGACACGGATGACTACCGCCGCCATTGGTTTTACGCTCACGTAACCAGAGCCACTGAATCCGGGGACTACCAAGCAACTACGTGGCAGATTGTGTTTCGTCTTCGAGGACCCATAAAGACCGGAACCTATACGCTCCGGTTGGCGTTGGCCTCCAGTAGTCATGGGGTGGTCGATGTCCGGTTCAACAACCCGATGGCCAGACGACCTGCTTTCACGACTGGGTATTGGAATGCAGGAAGAGATAACGCAATCGCAAGACATGGCATTCATGGGCTTTATCGGTTATTCAACTTCGATGTTCCCAGTTATTATTTGGTCGAAGGAGACAACGTAATCTATCTTACACAGAGAAGACATGCAGGTCCTTTCCAAGGAGTAATGTACGACTACATACGATTTGAAGGTGTAGAGTAG

mRNA sequence

ATGGAGAAGAAAGACAGAAGAAGAAGCACACAGCCATGGATTTGGAAGCTTGAGCTCTCATCAATGGCGCTCCTTCTCTTATTCATCTTCACTTTATCGCTCGCCAAAGCACTGCCACAACAGCAGCATTCGTCCCCGCCGTTGGCACCCGACGTAGCCCTACAATGGCAGATTCGTGGACAGGTGGCAATTGACAATGGGTTGATTCGAGTCACTTTTTCTCACGAAGGCAACGTTATTGGCATAAAATACAATAACATGGATAACATACTTGATTTTCACAATGCATACAATAACAGAGCATATTTGGATTTGGCTTGGAACACCCCAAATCAGACAAGTATTATTGAAAGAGTAAAGGCAACCAATGTGAAGGTGGTTACAGCCACCGGTGACCAAATAGAGCTTTCATTCACCAGATATTGGAATTCTTCCGACCCTTTTTCAGTCCCTTCGAACATAGATCAGAGGTATATTTTGAGACGGGGCGATTCTGGATATTATACATATAGCATATTTGAACGGCTGGAAAATTGGCCTGAACTTGGAGTGGACGAGATCAGAATCGCCTACAAAGCCCTAAGAGACAAATTTCATTACATGGCGATATCGGACGATCGACAGAGGATCATGCCCACGCAACTGGACCGGATGACTGGGCAGCGTCTCGCTTACGCGGAGGCGGTTCTCATAACCCAACCCACCAACCCGGACCTCAAAGGAGAGGTGGACGATAAGTACCAGTACTCGCAAGAGAATATGGAGAACAGGGTGCATGGATGGGTGTCTAGGGACCCAAACGTGGGGTTCTGGATGATCACGGCCAGTGATGAGTTTCGTTCGGGGGGGCCGGTCAAGCAAGAACTCACATCCCACGTTGGCCCCACAACTCTTACGGTGTTCAAGAGTAATCATTATGCGGGTAAGGATGCTTCGATGAGATTTAAGGAGGGAGAAGCATGGAAAAAGGTTTTGGGCCCGGTTTTCATTTATCTAAACTCGGACCCGACCGGCACTGAAACCCCGGGTTCACTATGGGAAGATGCTAAAAACCAGATGAGGATAGAGAGGGGGAAGTGGCCGTATGGGTTCGTCGAGTCGAAAGAATTTCCATGCTCAGAGGAAAGAGGCAGCGTTAGTGGCCGATTAATGGTCCGAGATAGATTCGCCAAGAAGGGGCAAATGTGGGCCGATTCTGCGTTTGTGGGCCTCGCAGCTCCCGGGGAAGTGGGGTCTTGGCAAACTGAGAGCAAGGGGTATCAATTTTGGACACGAGCGGATCAAGATGGAAATTTCTTCATTCAAAATATAAGGCCAGGAAACTACAATCTCTACGCATGGGTACCCGGCGTCATTGGCGATTACAAGTACGACGGCGACGTCACCGTCACGGCGGCGAGTTCCACTAACCTGAGTGTGCTGATTTACGACCCACCACGACGAGGCCCAACTCTGTGGGAGATCGGCATCCCTGACCGGAAGGCAGCCGAGTTCTACATACCGGATCCTGAACCCACCTTAATGAGCCACTTTTACAACAACACCAAAATTCAAAACCCAGATAAGTTCCGGCAGTACGGTATCTGGGCACGCTACGCTGATTTGTACCCTGATCAGGATCTGGTGTACAACGTTGACACGGATGACTACCGCCGCCATTGGTTTTACGCTCACGTAACCAGAGCCACTGAATCCGGGGACTACCAAGCAACTACGTGGCAGATTGTGTTTCGTCTTCGAGGACCCATAAAGACCGGAACCTATACGCTCCGGTTGGCGTTGGCCTCCAGTAGTCATGGGGTGGTCGATGTCCGGTTCAACAACCCGATGGCCAGACGACCTGCTTTCACGACTGGGTATTGGAATGCAGGAAGAGATAACGCAATCGCAAGACATGGCATTCATGGGCTTTATCGGTTATTCAACTTCGATGTTCCCAGTTATTATTTGGTCGAAGGAGACAACGTAATCTATCTTACACAGAGAAGACATGCAGGTCCTTTCCAAGGAGTAATGTACGACTACATACGATTTGAAGGTGTAGAGTAG

Coding sequence (CDS)

ATGGAGAAGAAAGACAGAAGAAGAAGCACACAGCCATGGATTTGGAAGCTTGAGCTCTCATCAATGGCGCTCCTTCTCTTATTCATCTTCACTTTATCGCTCGCCAAAGCACTGCCACAACAGCAGCATTCGTCCCCGCCGTTGGCACCCGACGTAGCCCTACAATGGCAGATTCGTGGACAGGTGGCAATTGACAATGGGTTGATTCGAGTCACTTTTTCTCACGAAGGCAACGTTATTGGCATAAAATACAATAACATGGATAACATACTTGATTTTCACAATGCATACAATAACAGAGCATATTTGGATTTGGCTTGGAACACCCCAAATCAGACAAGTATTATTGAAAGAGTAAAGGCAACCAATGTGAAGGTGGTTACAGCCACCGGTGACCAAATAGAGCTTTCATTCACCAGATATTGGAATTCTTCCGACCCTTTTTCAGTCCCTTCGAACATAGATCAGAGGTATATTTTGAGACGGGGCGATTCTGGATATTATACATATAGCATATTTGAACGGCTGGAAAATTGGCCTGAACTTGGAGTGGACGAGATCAGAATCGCCTACAAAGCCCTAAGAGACAAATTTCATTACATGGCGATATCGGACGATCGACAGAGGATCATGCCCACGCAACTGGACCGGATGACTGGGCAGCGTCTCGCTTACGCGGAGGCGGTTCTCATAACCCAACCCACCAACCCGGACCTCAAAGGAGAGGTGGACGATAAGTACCAGTACTCGCAAGAGAATATGGAGAACAGGGTGCATGGATGGGTGTCTAGGGACCCAAACGTGGGGTTCTGGATGATCACGGCCAGTGATGAGTTTCGTTCGGGGGGGCCGGTCAAGCAAGAACTCACATCCCACGTTGGCCCCACAACTCTTACGGTGTTCAAGAGTAATCATTATGCGGGTAAGGATGCTTCGATGAGATTTAAGGAGGGAGAAGCATGGAAAAAGGTTTTGGGCCCGGTTTTCATTTATCTAAACTCGGACCCGACCGGCACTGAAACCCCGGGTTCACTATGGGAAGATGCTAAAAACCAGATGAGGATAGAGAGGGGGAAGTGGCCGTATGGGTTCGTCGAGTCGAAAGAATTTCCATGCTCAGAGGAAAGAGGCAGCGTTAGTGGCCGATTAATGGTCCGAGATAGATTCGCCAAGAAGGGGCAAATGTGGGCCGATTCTGCGTTTGTGGGCCTCGCAGCTCCCGGGGAAGTGGGGTCTTGGCAAACTGAGAGCAAGGGGTATCAATTTTGGACACGAGCGGATCAAGATGGAAATTTCTTCATTCAAAATATAAGGCCAGGAAACTACAATCTCTACGCATGGGTACCCGGCGTCATTGGCGATTACAAGTACGACGGCGACGTCACCGTCACGGCGGCGAGTTCCACTAACCTGAGTGTGCTGATTTACGACCCACCACGACGAGGCCCAACTCTGTGGGAGATCGGCATCCCTGACCGGAAGGCAGCCGAGTTCTACATACCGGATCCTGAACCCACCTTAATGAGCCACTTTTACAACAACACCAAAATTCAAAACCCAGATAAGTTCCGGCAGTACGGTATCTGGGCACGCTACGCTGATTTGTACCCTGATCAGGATCTGGTGTACAACGTTGACACGGATGACTACCGCCGCCATTGGTTTTACGCTCACGTAACCAGAGCCACTGAATCCGGGGACTACCAAGCAACTACGTGGCAGATTGTGTTTCGTCTTCGAGGACCCATAAAGACCGGAACCTATACGCTCCGGTTGGCGTTGGCCTCCAGTAGTCATGGGGTGGTCGATGTCCGGTTCAACAACCCGATGGCCAGACGACCTGCTTTCACGACTGGGTATTGGAATGCAGGAAGAGATAACGCAATCGCAAGACATGGCATTCATGGGCTTTATCGGTTATTCAACTTCGATGTTCCCAGTTATTATTTGGTCGAAGGAGACAACGTAATCTATCTTACACAGAGAAGACATGCAGGTCCTTTCCAAGGAGTAATGTACGACTACATACGATTTGAAGGTGTAGAGTAG

Protein sequence

MEKKDRRRSTQPWIWKLELSSMALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIGIKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRYWNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGVE

Homology

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BLAST of CmoCh07G005880 vs. ExPASy Swiss-Prot
Match: Q8RJP2 (Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=rhiE PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.9e-31
Identity = 156/624 (25.00%), Postives = 248/624 (39.74%), Query Frame = 0


Query: 47  PLAPDVALQWQIRG-QVAIDNGLIRVTFSHEGNVIGIKYNNMDNILDFHNA-----YNNR 106
           PL    A++  + G    +DNGL++V F  +G+   +     + I     A      N  
Sbjct: 22  PLTATGAVKLTLDGMNSTLDNGLLKVRFGADGSAKEVWKGGTNLISRLSGAARDPDKNRS 81

Query: 107 AYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRYWNSSDPFSVPSNIDQRYIL 166
            YLD      N+  + ER     ++V+  T DQ+ L++       D  +    ++   I+
Sbjct: 82  FYLDYYSGGVNE-FVPER-----LEVIKQTPDQVHLAYI------DDQNGKLRLEYHLIM 141

Query: 167 RRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTG 226
            R  SG Y+Y +     + P + V E+R  Y+   D      + +  +R  P   D +  
Sbjct: 142 TRDVSGLYSYVVAANTGSAP-VTVSELRNVYRF--DATRLDTLFNSIRRGTPLLYDELEQ 201

Query: 227 QRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFR 286
                 E   +     PD  G V  KY ++    E+R   W       G WM+ AS E+ 
Sbjct: 202 LPKVQDETWRL-----PD--GSVYSKYDFAGYQRESRY--WGVMGNGYGAWMVPASGEYY 261

Query: 287 SGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTE 346
           SG  +KQEL  H     L     +H+   D   +      ++K+ GP  +Y+N       
Sbjct: 262 SGDALKQELLVHQDAIILNYLTGSHFGTPDMVAQ----PGFEKLYGPWLLYINQG----- 321

Query: 347 TPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSA 406
               L  D   +   ER  WPY +++   +P   +R +VSGRL             A  A
Sbjct: 322 NDRELVADVSRRAEHERASWPYRWLDDARYP--RQRATVSGRLRTE----------APHA 381

Query: 407 FVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGD 466
            V L +  E  ++  ++ GY F  R ++DG F + N+ PG Y L A+  G          
Sbjct: 382 TVVLNSSAE--NFDIQTTGYLFSARTNRDGRFSLSNVPPGEYRLSAYADGGTQIGLLAQQ 441

Query: 467 VTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNP 526
                   T L  +  D  +  P  W IG  DR+A EF                   +  
Sbjct: 442 TVRVEGKKTRLGQI--DARQPAPLAWAIGQADRRADEF-------------------RFG 501

Query: 527 DKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLR 586
           DK RQY    R+    P  DL + +     R+ W+YA           Q  +W I+F  R
Sbjct: 502 DKPRQY----RWQTEVP-ADLTFEIGKSRERKDWYYAQT---------QPGSWHILFNTR 559

Query: 587 GPIKTGTYTLRLALASSSHGVVDVRFNNPM----ARRPAFTTGYWNAGRDNAIARHGIH- 646
            P +   YTL +A+A++S+  +    ++P           TT  ++   D +I R  +  
Sbjct: 562 TPEQ--PYTLNIAIAAASNNGMTTPASSPQLAVKLNGQLLTTLKYD--NDKSIYRGAMQS 559

Query: 647 GLYRLFNFDVPSYYLVEGDNVIYL 660
           G Y   +  +P+  L +G N I L
Sbjct: 622 GRYHEAHIPLPAGALQQGGNRITL 559

[Close]

BLAST of CmoCh07G005880 vs. ExPASy TrEMBL
Match: A0A6J1HHQ6 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111463085 PE=3 SV=1)

HSP 1 Score: 1387.5 bits (3590), Expect = 0.0e+00
Identity = 661/661 (100.00%), Postives = 661/661 (100.00%), Query Frame = 0


Query: 22  MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIG 81
           MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIG
Sbjct: 1   MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIG 60

Query: 82  IKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRY 141
           IKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRY
Sbjct: 61  IKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRY 120

Query: 142 WNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM 201
           WNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM
Sbjct: 121 WNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM 180

Query: 202 AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW 261
           AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW
Sbjct: 181 AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW 240

Query: 262 VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW 321
           VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW
Sbjct: 241 VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW 300

Query: 322 KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSG 381
           KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSG
Sbjct: 301 KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSG 360

Query: 382 RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN 441
           RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN
Sbjct: 361 RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN 420

Query: 442 YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP 501
           YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP
Sbjct: 421 YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP 480

Query: 502 DPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR 561
           DPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR
Sbjct: 481 DPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR 540

Query: 562 ATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW 621
           ATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW
Sbjct: 541 ATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW 600

Query: 622 NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV 681
           NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV
Sbjct: 601 NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV 660

Query: 682 E 683
           E
Sbjct: 661 E 661

[Close]

BLAST of CmoCh07G005880 vs. ExPASy TrEMBL
Match: A0A6J1IPB6 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111478723 PE=3 SV=1)

HSP 1 Score: 1008.4 bits (2606), Expect = 1.4e-290
Identity = 477/692 (68.93%), Postives = 556/692 (80.35%), Query Frame = 0


Query: 1   MEKKDRRRSTQP-WIWKLELSSMALLLLFIFTLSLAKALPQQ--------QHSSPPLAPD 60
           MEKK + R  +P W WKL  S+M LL LF F+L+LA     Q        +++   L+ D
Sbjct: 40  MEKKGKARRQRPYWTWKLGFSAMPLLFLF-FSLTLAHKNSSQRRMVRKLVKNNESMLSRD 99

Query: 61  VALQWQIRGQVAIDNGLIRVTFSH-EGNVIGIKYNNMDNILDFHNAYNNRAYLDLAWNTP 120
           V ++W+ RGQV +DNGL+R+T S  EGNV+ +KYN +DN+L+  N   NR Y D+ WN P
Sbjct: 100 VTVEWENRGQVVMDNGLVRITLSSPEGNVVALKYNAIDNLLEIRNPQYNRGYWDVVWNRP 159

Query: 121 NQTSIIERVKATNVKVVTATGDQIELSFTRYWNSSDPFSVPSNIDQRYILRRGDSGYYTY 180
           N+ S  +RV+AT+ KV+TAT DQIELSFT+ WN +   S P NID+RYILRRGDSG+Y Y
Sbjct: 160 NRGSATDRVRATDFKVITATTDQIELSFTKTWNPNSHSSCPLNIDKRYILRRGDSGFYAY 219

Query: 181 SIFERLENWPELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAEAVL 240
           +IFERL+ WP++ VD+IR+ +K L  KFHYM +SDDRQRIMPT  DR TG  LAY EAVL
Sbjct: 220 AIFERLDGWPQIDVDQIRMVFKILGKKFHYMVVSDDRQRIMPTARDRETGHPLAYREAVL 279

Query: 241 ITQPTNPDLKGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELT 300
           +TQP N +LKGEVDDKYQYS ENMEN+VHGW S +P+VGFWMIT SDEFR+ GPVKQ+LT
Sbjct: 280 LTQPINSNLKGEVDDKYQYSLENMENKVHGWESMNPHVGFWMITPSDEFRTAGPVKQDLT 339

Query: 301 SHVGPTTLTVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAK 360
           SHVGPTTL++F S HYAGK+ SMRF EGEAWKKV GPVFIYLNS P GT  PG LWEDAK
Sbjct: 340 SHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFIYLNSGPVGT-GPGLLWEDAK 399

Query: 361 NQMRIERGKWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEV 420
           NQMRIE  +WPY FV S +FP S +RG+VSGRL+VRDR AKK  MW DSA+VGLAAPGE+
Sbjct: 400 NQMRIETSRWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGEL 459

Query: 421 GSWQTESKGYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTN 480
           GSWQTESKGYQFWTRAD  G F I NIRPGNYNLYAW+PGVIGDYKY  D+TVT  S+T 
Sbjct: 460 GSWQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWIPGVIGDYKYANDITVTLGSTTR 519

Query: 481 LSVLIYDPPRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQYGIWA 540
           L +LIYDPPR+GPTLWEIG+PDR AAEFYIPDP PTLM+ FYNN+ I  PDKFRQYG+W 
Sbjct: 520 LGLLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPHPTLMNRFYNNSDIHTPDKFRQYGLWE 579

Query: 541 RYADLYPDQDLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTGTYTL 600
           RYA+L+P QDLVYNV TDDYRRHWF+AHVTRAT  G YQATTWQIVFRL+GP ++G Y L
Sbjct: 580 RYAELFPRQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYML 639

Query: 601 RLALASSSHGVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYL 660
           RLALAS++  VV++RFNNP+ARR  F TGYW +GRDNAIARHGIHGLY LFNF VPS YL
Sbjct: 640 RLALASTTEAVVEIRFNNPLARRAHFLTGYWASGRDNAIARHGIHGLYWLFNFQVPSGYL 699

Query: 661 VEGDNVIYLTQRRHAGPFQGVMYDYIRFEGVE 683
           VE +N+IYLTQRRH GPFQGVMYDYIRFEGV+
Sbjct: 700 VEDENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 729

[Close]

BLAST of CmoCh07G005880 vs. ExPASy TrEMBL
Match: A0A1S3B1X3 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1)

HSP 1 Score: 1004.6 bits (2596), Expect = 2.0e-289
Identity = 474/696 (68.10%), Postives = 560/696 (80.46%), Query Frame = 0


Query: 1   MEKKDRRRSTQPWIWKLELSSMALLLLFIFTLSLAKA--LPQQQ----------HSSPPL 60
           ME K+ +  T         S+MA LL   F L+LA A  +PQQQ          ++   L
Sbjct: 1   MEIKNAKIRTTQHKKLRRFSTMAALLFLFFGLALAMAVPVPQQQDFSQQILVENNNKTML 60

Query: 61  APDVALQWQIRGQVAIDNGLIRVTFSH-EGNVIGIKYNNMDNILDFHNAYNNRAYLDLAW 120
           + DV L+ Q  GQV IDNG++RVTFS  +GNVI +KY  +DN+L+ HN + NR Y D+ W
Sbjct: 61  SRDVTLELQNHGQVIIDNGIVRVTFSRPDGNVIALKYKGVDNLLEIHNVHYNRGYWDVVW 120

Query: 121 NTPNQTSIIERVKATNVKVVTATGDQIELSFTRYWNSSDPFSVPSNIDQRYILRRGDSGY 180
           N PN+ S  +RV+ATN KV+TA  DQ+ELSFT+ W+ SD  S+P NID+RYI+RRGDSG+
Sbjct: 121 NRPNKASATDRVRATNFKVITANDDQVELSFTKTWDPSDASSLPLNIDKRYIVRRGDSGF 180

Query: 181 YTYSIFERLENWPELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAE 240
           Y+Y IFERL  WP++ VD+IRIAYK L DKFHYMA+SDDRQR+MPT  DR+ G+ L Y E
Sbjct: 181 YSYGIFERLNGWPQIDVDQIRIAYKLLGDKFHYMAVSDDRQRMMPTAEDRLAGKPLDYPE 240

Query: 241 AVLITQPTNPDLKGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQ 300
           AVL+T+P +P  +GEVDDKYQYS ENMENRVHGW S DP+VGFWMIT SDEFR+ GPVKQ
Sbjct: 241 AVLLTRPADPSFQGEVDDKYQYSLENMENRVHGWESSDPHVGFWMITPSDEFRTAGPVKQ 300

Query: 301 ELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWE 360
           +LTSHVGP TL++F S HYAGKD SMRF+EGEAWKKV GPVF YLNSDPTGT+ PGSLWE
Sbjct: 301 DLTSHVGPITLSMFVSTHYAGKDVSMRFREGEAWKKVFGPVFTYLNSDPTGTDNPGSLWE 360

Query: 361 DAKNQMRIERGKWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAP 420
           DAKNQM IE  +WPY FVES+EFP S++RGS+ G+L+VRDR+AK  QMWADSA+VGLAAP
Sbjct: 361 DAKNQMTIETSRWPYNFVESREFPSSDQRGSLRGQLLVRDRYAKYPQMWADSAYVGLAAP 420

Query: 421 GEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAAS 480
           GE+GSWQ ESKGYQFWTRAD+ G F I NIR G YNLYAWVPGV+GDYKYD ++T+T  S
Sbjct: 421 GELGSWQRESKGYQFWTRADEHGYFSIDNIRSGTYNLYAWVPGVLGDYKYDKEITITPRS 480

Query: 481 STNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQ-NPDKFRQY 540
           STNL++L++DPPR+GPTLWEIGIPDRKAAEFYIP P PTLM+ FYN++KI  + D FRQY
Sbjct: 481 STNLNLLVFDPPRQGPTLWEIGIPDRKAAEFYIPSPRPTLMNRFYNDSKIHIHDDNFRQY 540

Query: 541 GIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTG 600
           G+W RYA+LYP QDLVYNVDTDDYRR+WF+AHVTRAT SG Y+ATTWQIVFRL+ P K G
Sbjct: 541 GLWERYAELYPHQDLVYNVDTDDYRRNWFFAHVTRATNSGIYEATTWQIVFRLQRPKKIG 600

Query: 601 TYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVP 660
            Y LRLALASS+  V+D+RFNNP  +R  FTTGYW++G+DNAIARHGIHGLY LFNF VP
Sbjct: 601 NYMLRLALASSTEAVIDIRFNNPSTKRTHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVP 660

Query: 661 SYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGVE 683
           S YLVEG+NVIYLTQRRH G FQGVMYDYIRFE VE
Sbjct: 661 SQYLVEGENVIYLTQRRHTGAFQGVMYDYIRFEDVE 696

[Close]

BLAST of CmoCh07G005880 vs. ExPASy TrEMBL
Match: A0A0A0KIQ2 (Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_6G497340 PE=3 SV=1)

HSP 1 Score: 984.9 bits (2545), Expect = 1.6e-283
Identity = 462/673 (68.65%), Postives = 541/673 (80.39%), Query Frame = 0


Query: 22  MALLLLFIFTLSLAKALPQQQHSSPP----------LAPDVALQWQIRGQVAIDNGLIRV 81
           MA LL F F L+LA A+P QQ SS            L+ DV L+ Q  GQV IDNG++RV
Sbjct: 1   MAALLFFFFGLALAMAVPPQQDSSQQILEENNNKAMLSRDVTLELQNHGQVIIDNGIVRV 60

Query: 82  TFSH-EGNVIGIKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTAT 141
           T S  +G+VI +KYN +DN+L+  N  +NR Y D+ WN PN+ S  +RV ATN KV+T+ 
Sbjct: 61  TLSRPDGDVIALKYNGIDNLLEIRNVQSNRGYWDVVWNRPNKASATDRVIATNFKVITSN 120

Query: 142 GDQIELSFTRYWNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIA 201
            DQ+ELSF + W+ SDP S+PSNID+RYILRRGDSG+Y+Y IFERL  WP++ VD+IRIA
Sbjct: 121 SDQVELSFAKTWDPSDPSSLPSNIDKRYILRRGDSGFYSYGIFERLNGWPQIEVDQIRIA 180

Query: 202 YKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYS 261
           YK L DKFHYMAISD+RQR+MPT  DR+TG+ L Y EAVL+T+P +P  +GEVDDKYQYS
Sbjct: 181 YKLLGDKFHYMAISDNRQRMMPTAEDRLTGKPLDYPEAVLLTRPRDPSFRGEVDDKYQYS 240

Query: 262 QENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKD 321
            ENMEN+VHGW S DP+VGFWMIT SDEFR+ GPVKQ+LTSHVGP TL++F S HYAGKD
Sbjct: 241 LENMENKVHGWESSDPHVGFWMITPSDEFRTAGPVKQDLTSHVGPVTLSMFVSTHYAGKD 300

Query: 322 ASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEF 381
            SMRF+EGEAWKKV GPVF Y+NSDPTGT  PGSLW+DAKNQMRIE  KWPY FVES EF
Sbjct: 301 VSMRFQEGEAWKKVFGPVFTYINSDPTGTGKPGSLWDDAKNQMRIETSKWPYNFVESTEF 360

Query: 382 PCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDG 441
           P SE+RGS+SG+L+VRD FAK  QMW DSA+VGLAAPGE+GSWQ ESKGYQFWTRAD  G
Sbjct: 361 PSSEQRGSLSGQLLVRDGFAKYPQMWGDSAYVGLAAPGELGSWQRESKGYQFWTRADDHG 420

Query: 442 NFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGI 501
            F I NIR G YNLYAWVPGV+GDYKYD  +T+T  SSTNL++L++ PPR+GPTLWEIGI
Sbjct: 421 YFSIDNIRSGTYNLYAWVPGVLGDYKYDNQITITPRSSTNLNLLVFHPPRQGPTLWEIGI 480

Query: 502 PDRKAAEFYIPDPEPTLMSHFYNNTKIQ-NPDKFRQYGIWARYADLYPDQDLVYNVDTDD 561
           PDRKAAEFYIP P PTL + FYN++K+    D FRQYG+W RYA+LYP  DLVYNVDTDD
Sbjct: 481 PDRKAAEFYIPSPRPTLTNCFYNDSKLHIQDDNFRQYGLWERYAELYPHGDLVYNVDTDD 540

Query: 562 YRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNP 621
           Y R+WFYAHVTRAT SG Y+ATTWQIVF ++ P + G Y LRLALASS+  V+D+RFNNP
Sbjct: 541 YHRNWFYAHVTRATGSGTYEATTWQIVFHIQRPKQIGNYMLRLALASSTDAVIDIRFNNP 600

Query: 622 MARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQ 681
             ++P FTTGYW++G+DNAIARHGIHGL+ LFNF VPS  LVEG NVIYLTQRRH G FQ
Sbjct: 601 STKQPHFTTGYWSSGKDNAIARHGIHGLHWLFNFQVPSQLLVEGQNVIYLTQRRHTGEFQ 660

Query: 682 GVMYDYIRFEGVE 683
           GVMYDYIRFE VE
Sbjct: 661 GVMYDYIRFEDVE 673

[Close]

BLAST of CmoCh07G005880 vs. ExPASy TrEMBL
Match: A0A1S3B219 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1)

HSP 1 Score: 983.8 bits (2542), Expect = 3.6e-283
Identity = 449/623 (72.07%), Postives = 526/623 (84.43%), Query Frame = 0


Query: 62  VAIDNGLIRVTFSH-EGNVIGIKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVK 121
           V IDNG++RVTFS  +GNVI +KY  +DN+L+ HN + NR Y D+ WN PN+ S  +RV+
Sbjct: 2   VIIDNGIVRVTFSRPDGNVIALKYKGVDNLLEIHNVHYNRGYWDVVWNRPNKASATDRVR 61

Query: 122 ATNVKVVTATGDQIELSFTRYWNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWP 181
           ATN KV+TA  DQ+ELSFT+ W+ SD  S+P NID+RYI+RRGDSG+Y+Y IFERL  WP
Sbjct: 62  ATNFKVITANDDQVELSFTKTWDPSDASSLPLNIDKRYIVRRGDSGFYSYGIFERLNGWP 121

Query: 182 ELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLK 241
           ++ VD+IRIAYK L DKFHYMA+SDDRQR+MPT  DR+ G+ L Y EAVL+T+P +P  +
Sbjct: 122 QIDVDQIRIAYKLLGDKFHYMAVSDDRQRMMPTAEDRLAGKPLDYPEAVLLTRPADPSFQ 181

Query: 242 GEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTV 301
           GEVDDKYQYS ENMENRVHGW S DP+VGFWMIT SDEFR+ GPVKQ+LTSHVGP TL++
Sbjct: 182 GEVDDKYQYSLENMENRVHGWESSDPHVGFWMITPSDEFRTAGPVKQDLTSHVGPITLSM 241

Query: 302 FKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKW 361
           F S HYAGKD SMRF+EGEAWKKV GPVF YLNSDPTGT+ PGSLWEDAKNQM IE  +W
Sbjct: 242 FVSTHYAGKDVSMRFREGEAWKKVFGPVFTYLNSDPTGTDNPGSLWEDAKNQMTIETSRW 301

Query: 362 PYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGY 421
           PY FVES+EFP S++RGS+ G+L+VRDR+AK  QMWADSA+VGLAAPGE+GSWQ ESKGY
Sbjct: 302 PYNFVESREFPSSDQRGSLRGQLLVRDRYAKYPQMWADSAYVGLAAPGELGSWQRESKGY 361

Query: 422 QFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPR 481
           QFWTRAD+ G F I NIR G YNLYAWVPGV+GDYKYD ++T+T  SSTNL++L++DPPR
Sbjct: 362 QFWTRADEHGYFSIDNIRSGTYNLYAWVPGVLGDYKYDKEITITPRSSTNLNLLVFDPPR 421

Query: 482 RGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQ-NPDKFRQYGIWARYADLYPDQ 541
           +GPTLWEIGIPDRKAAEFYIP P PTLM+ FYN++KI  + D FRQYG+W RYA+LYP Q
Sbjct: 422 QGPTLWEIGIPDRKAAEFYIPSPRPTLMNRFYNDSKIHIHDDNFRQYGLWERYAELYPHQ 481

Query: 542 DLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSH 601
           DLVYNVDTDDYRR+WF+AHVTRAT SG Y+ATTWQIVFRL+ P K G Y LRLALASS+ 
Sbjct: 482 DLVYNVDTDDYRRNWFFAHVTRATNSGIYEATTWQIVFRLQRPKKIGNYMLRLALASSTE 541

Query: 602 GVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYL 661
            V+D+RFNNP  +R  FTTGYW++G+DNAIARHGIHGLY LFNF VPS YLVEG+NVIYL
Sbjct: 542 AVIDIRFNNPSTKRTHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSQYLVEGENVIYL 601

Query: 662 TQRRHAGPFQGVMYDYIRFEGVE 683
           TQRRH G FQGVMYDYIRFE VE
Sbjct: 602 TQRRHTGAFQGVMYDYIRFEDVE 624

[Close]

BLAST of CmoCh07G005880 vs. NCBI nr
Match: XP_022962664.1 (uncharacterized protein LOC111463085 [Cucurbita moschata])

HSP 1 Score: 1387.5 bits (3590), Expect = 0.0e+00
Identity = 661/661 (100.00%), Postives = 661/661 (100.00%), Query Frame = 0


Query: 22  MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIG 81
           MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIG
Sbjct: 1   MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIG 60

Query: 82  IKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRY 141
           IKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRY
Sbjct: 61  IKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRY 120

Query: 142 WNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM 201
           WNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM
Sbjct: 121 WNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM 180

Query: 202 AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW 261
           AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW
Sbjct: 181 AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW 240

Query: 262 VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW 321
           VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW
Sbjct: 241 VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW 300

Query: 322 KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSG 381
           KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSG
Sbjct: 301 KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSG 360

Query: 382 RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN 441
           RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN
Sbjct: 361 RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN 420

Query: 442 YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP 501
           YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP
Sbjct: 421 YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP 480

Query: 502 DPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR 561
           DPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR
Sbjct: 481 DPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR 540

Query: 562 ATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW 621
           ATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW
Sbjct: 541 ATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW 600

Query: 622 NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV 681
           NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV
Sbjct: 601 NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV 660

Query: 682 E 683
           E
Sbjct: 661 E 661

[Close]

BLAST of CmoCh07G005880 vs. NCBI nr
Match: KAG7026879.1 (rhiE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1367.4 bits (3538), Expect = 0.0e+00
Identity = 657/682 (96.33%), Postives = 661/682 (96.92%), Query Frame = 0


Query: 1   MEKKDRRRSTQPWIWKLELSSMALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRG 60
           MEKKDRRRSTQPWIWKLELSSMALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRG
Sbjct: 1   MEKKDRRRSTQPWIWKLELSSMALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRG 60

Query: 61  QVAIDNGLIRVTFSHEGNVIGIKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVK 120
           QVA+DNGLIRVTFSHEGNVIGIKYNNMDNILDFHNAYNNRA                 VK
Sbjct: 61  QVAMDNGLIRVTFSHEGNVIGIKYNNMDNILDFHNAYNNRA-----------------VK 120

Query: 121 ATNVKVVTATGDQIELSFTRYWNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWP 180
           ATNVKVVTATGDQIELSFTRYWNSSDPFSVP NIDQRYILRRGDSGYYTYSIFERLENWP
Sbjct: 121 ATNVKVVTATGDQIELSFTRYWNSSDPFSVPLNIDQRYILRRGDSGYYTYSIFERLENWP 180

Query: 181 ELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLK 240
           ELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLK
Sbjct: 181 ELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLK 240

Query: 241 GEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTV 300
           GEVDDKYQYSQENM+NRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTV
Sbjct: 241 GEVDDKYQYSQENMDNRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTV 300

Query: 301 FKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKW 360
           FKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNS+PTGTETPGSLWEDAKNQMRIERGKW
Sbjct: 301 FKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSEPTGTETPGSLWEDAKNQMRIERGKW 360

Query: 361 PYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGY 420
           PYGFVESKEFP SEERGSVSGRLMVRDRFAKKGQMWA+SAFVGLAAPGEVGSWQTESKGY
Sbjct: 361 PYGFVESKEFPSSEERGSVSGRLMVRDRFAKKGQMWAESAFVGLAAPGEVGSWQTESKGY 420

Query: 421 QFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPR 480
           QFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPR
Sbjct: 421 QFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPR 480

Query: 481 RGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQD 540
           RGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQ PDKFRQYGIWARYADLYPDQD
Sbjct: 481 RGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQTPDKFRQYGIWARYADLYPDQD 540

Query: 541 LVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHG 600
           LVYNVDTDDYRRHWFYAHVTRAT SGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHG
Sbjct: 541 LVYNVDTDDYRRHWFYAHVTRATGSGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHG 600

Query: 601 VVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLT 660
           VVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLT
Sbjct: 601 VVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLT 660

Query: 661 QRRHAGPFQGVMYDYIRFEGVE 683
           QRRHAGPFQGVMYDYIRFEGVE
Sbjct: 661 QRRHAGPFQGVMYDYIRFEGVE 665

[Close]

BLAST of CmoCh07G005880 vs. NCBI nr
Match: XP_023518133.1 (probable rhamnogalacturonate lyase B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1338.6 bits (3463), Expect = 0.0e+00
Identity = 635/661 (96.07%), Postives = 645/661 (97.58%), Query Frame = 0


Query: 22  MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIG 81
           M LLLLFIFTLSLAKA PQQQHSSPPLAPDV LQWQIRGQVA+DNGLIRVTFS EGNVIG
Sbjct: 1   MVLLLLFIFTLSLAKARPQQQHSSPPLAPDVFLQWQIRGQVAMDNGLIRVTFSREGNVIG 60

Query: 82  IKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRY 141
           IKYNNMDNILD+HNAYNNRAYLDLAWNTPNQTSIIERVKATNVKV+TATGDQIELSFTRY
Sbjct: 61  IKYNNMDNILDYHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVITATGDQIELSFTRY 120

Query: 142 WNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM 201
           WNSSDPFSVP NIDQRYILRRGDSGYYTYS+FERLE WPEL VDEIRIAYKALRDKFHYM
Sbjct: 121 WNSSDPFSVPLNIDQRYILRRGDSGYYTYSMFERLETWPELEVDEIRIAYKALRDKFHYM 180

Query: 202 AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW 261
           A+SDDRQR MPTQLDRMTGQRLAYAEAVLITQPTNPD+KGEVDDKYQYSQENM+NRVHGW
Sbjct: 181 AVSDDRQRTMPTQLDRMTGQRLAYAEAVLITQPTNPDVKGEVDDKYQYSQENMDNRVHGW 240

Query: 262 VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW 321
           VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW
Sbjct: 241 VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW 300

Query: 322 KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSG 381
           KKV GPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFP SEERGSVSG
Sbjct: 301 KKVFGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPRSEERGSVSG 360

Query: 382 RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN 441
           RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRAD+DGNFFIQNIRPGN
Sbjct: 361 RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADEDGNFFIQNIRPGN 420

Query: 442 YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP 501
           YNLYAWVPGVIGDYKYDGD+ VTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP
Sbjct: 421 YNLYAWVPGVIGDYKYDGDIIVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP 480

Query: 502 DPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR 561
           DPEPTL SHFYNNTKIQ PDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR
Sbjct: 481 DPEPTLTSHFYNNTKIQTPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR 540

Query: 562 ATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW 621
           AT SGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNP+ARRPAFTTGYW
Sbjct: 541 ATGSGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPLARRPAFTTGYW 600

Query: 622 NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV 681
           NAGRDNAIARHGIHGLYRLFNFDVP YYLVEGDNVIYLTQRRHAGPF GVMYDYIRFEGV
Sbjct: 601 NAGRDNAIARHGIHGLYRLFNFDVPIYYLVEGDNVIYLTQRRHAGPFLGVMYDYIRFEGV 660

Query: 682 E 683
           E
Sbjct: 661 E 661

[Close]

BLAST of CmoCh07G005880 vs. NCBI nr
Match: KAG6594914.1 (hypothetical protein SDJN03_11467, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1328.9 bits (3438), Expect = 0.0e+00
Identity = 639/661 (96.67%), Postives = 640/661 (96.82%), Query Frame = 0


Query: 22  MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAIDNGLIRVTFSHEGNVIG 81
           MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVA+DNGLIRVTFSHEGNVIG
Sbjct: 1   MALLLLFIFTLSLAKALPQQQHSSPPLAPDVALQWQIRGQVAMDNGLIRVTFSHEGNVIG 60

Query: 82  IKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRY 141
           IKYNNMDNILDFHNAYNNRA                 VKATNVKVVTATGDQIELSFTRY
Sbjct: 61  IKYNNMDNILDFHNAYNNRA-----------------VKATNVKVVTATGDQIELSFTRY 120

Query: 142 WNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM 201
           WNSSDPFSVP NIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM
Sbjct: 121 WNSSDPFSVPLNIDQRYILRRGDSGYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYM 180

Query: 202 AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW 261
           AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW
Sbjct: 181 AISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGW 240

Query: 262 VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW 321
           VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW
Sbjct: 241 VSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAW 300

Query: 322 KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSG 381
           KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFP SEERGSVSG
Sbjct: 301 KKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGKWPYGFVESKEFPSSEERGSVSG 360

Query: 382 RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN 441
           RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN
Sbjct: 361 RLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGN 420

Query: 442 YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP 501
           YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP
Sbjct: 421 YNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIP 480

Query: 502 DPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR 561
           DPEPTLMSHFYNNTKIQ PDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR
Sbjct: 481 DPEPTLMSHFYNNTKIQTPDKFRQYGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTR 540

Query: 562 ATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW 621
           AT SGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW
Sbjct: 541 ATGSGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYW 600

Query: 622 NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV 681
           NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV
Sbjct: 601 NAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGV 644

Query: 682 E 683
           E
Sbjct: 661 E 644

[Close]

BLAST of CmoCh07G005880 vs. NCBI nr
Match: XP_038882453.1 (probable rhamnogalacturonate lyase B [Benincasa hispida])

HSP 1 Score: 1034.2 bits (2673), Expect = 4.9e-298
Identity = 484/697 (69.44%), Postives = 568/697 (81.49%), Query Frame = 0


Query: 1   MEKKDRRRSTQPWIWKLELSSMALLLLFIFTLSLAKALPQQQHS--------------SP 60
           MEKK +RR  Q    KLELS+MA L+   F+ +LAKA PQQQ S               P
Sbjct: 1   MEKKGKRRRQQK---KLELSAMAALIFLFFSFTLAKAKPQQQQSFQQRMRRNLVENNNKP 60

Query: 61  PLAPDVALQWQIRGQVAIDNGLIRVTFSH-EGNVIGIKYNNMDNILDFHNAYNNRAYLDL 120
            L+ DV L+WQ  GQV IDNGL+RVT S  +GNVIG+KY  +DN+L+ HNA +NR Y D+
Sbjct: 61  TLSRDVTLEWQNHGQVVIDNGLVRVTLSRPDGNVIGLKYKGIDNVLEIHNAQHNRGYWDV 120

Query: 121 AWNTPNQTSIIERVKATNVKVVTATGDQIELSFTRYWNSSDPFSVPSNIDQRYILRRGDS 180
            WN PN+ S  +RV+AT  KV+T   DQIELSFT+ W+ SD  S+P NID+RYILRRGD 
Sbjct: 121 VWNRPNRASATDRVRATEFKVITVNSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDY 180

Query: 181 GYYTYSIFERLENWPELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAY 240
           G+Y+Y IFERL+ WP++ VD+IRI YK   DKFHYMAISD+RQRIMPT  DR+ G+ LAY
Sbjct: 181 GFYSYGIFERLDGWPQIDVDQIRIVYKLQGDKFHYMAISDNRQRIMPTLQDRLMGRPLAY 240

Query: 241 AEAVLITQPTNPDLKGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPV 300
            EAVL+T+P N +LKGEVDDKYQYS ENMEN+VHGW S +P+VGFWMIT+SDEFR+ GPV
Sbjct: 241 PEAVLLTRPINSNLKGEVDDKYQYSLENMENKVHGWESSEPHVGFWMITSSDEFRTAGPV 300

Query: 301 KQELTSHVGPTTLTVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSL 360
           KQ+LTSHVGPTTL++F S HYAGK+ SMRF EGEAWKKV GPVF YLNSDPTGT + GSL
Sbjct: 301 KQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFTYLNSDPTGTGSLGSL 360

Query: 361 WEDAKNQMRIERGKWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLA 420
           WEDAKNQMRIER KWPY FVES +FP S++RG+VSGRL+VRDR+AK   MWADSA+VGLA
Sbjct: 361 WEDAKNQMRIERSKWPYNFVESGDFPSSDQRGTVSGRLLVRDRYAKNSHMWADSAYVGLA 420

Query: 421 APGEVGSWQTESKGYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTA 480
           APGE GSWQ ESKGYQFWTRAD+ G F I NIRPGNYNLYAWVPGV+ DYKYD ++ VT 
Sbjct: 421 APGESGSWQKESKGYQFWTRADEQGYFSIDNIRPGNYNLYAWVPGVVADYKYDKEIIVTP 480

Query: 481 ASSTNLSVLIYDPPRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQ 540
            SSTNL++L++ PPR+GPTLWEIG+PDR AAEFYIP+P+PTLM+ FYNN+K    D FRQ
Sbjct: 481 RSSTNLNLLVFHPPRQGPTLWEIGVPDRTAAEFYIPNPQPTLMNRFYNNSKFHTQDNFRQ 540

Query: 541 YGIWARYADLYPDQDLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKT 600
           YG+W +Y++LYP+QDLVYNV TD+YRRHWF+AHVTRAT S +Y+ATTWQIVFRL+GP +T
Sbjct: 541 YGLWEQYSELYPNQDLVYNVTTDNYRRHWFFAHVTRATTSDNYEATTWQIVFRLQGPKQT 600

Query: 601 GTYTLRLALASSSHGVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDV 660
           G Y LRLALASS+  VVD+RFNNP A RP F+TGYW++G+DNAIARHGIHGLY LFNF V
Sbjct: 601 GNYMLRLALASSTDAVVDIRFNNPSATRPHFSTGYWSSGKDNAIARHGIHGLYWLFNFQV 660

Query: 661 PSYYLVEGDNVIYLTQRRHAGPFQGVMYDYIRFEGVE 683
           PS YLVE +NVIYLTQRRH GPFQGVMYDYIRFEGVE
Sbjct: 661 PSQYLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE 694

[Close]

BLAST of CmoCh07G005880 vs. TAIR 10
Match: AT2G22620.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 718.0 bits (1852), Expect = 7.2e-207
Identity = 336/620 (54.19%), Postives = 436/620 (70.32%), Query Frame = 0


Query: 62  VAIDNGLIRVTFSH-EGNVIGIKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVK 121
           V +DNG+++VTFS+ EG + GIKY+ +DN+LD  +  ++R Y D+ W  P +    ++++
Sbjct: 62  VVVDNGIVQVTFSNPEGLITGIKYHGIDNVLD--DKIDDRGYWDVVWYEPEKKQKTDKLE 121

Query: 122 ATNVKVVTATGDQIELSFTRYWNSSDPFS-VPSNIDQRYILRRGDSGYYTYSIFERLENW 181
            T  +++T   +QIE+SFTR W  S   S VP N+D+RYI+R G SG Y Y I ERLE W
Sbjct: 122 GTKFEIITQNEEQIEISFTRTWTISRRGSLVPLNVDKRYIIRSGVSGLYMYGILERLEGW 181

Query: 182 PELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTGQRLAYAEAVLITQPTNPDL 241
           P++ +D+IRI +K    KF +MAISDDRQR MP+  DR   + LAY EAVL+T P+NP  
Sbjct: 182 PDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRENSKSLAYKEAVLLTNPSNPMF 241

Query: 242 KGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTLT 301
           KGEVDDKY YS E+ +N VHGW+S DP VGFWMIT SDEFR GGP+KQ+LTSH GP TL+
Sbjct: 242 KGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRLGGPIKQDLTSHAGPITLS 301

Query: 302 VFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERGK 361
           +F S HYAGK+  M ++ GE WKKV GPV  YLNS  +  ++   LW DAK QM  E   
Sbjct: 302 MFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNS-VSPKDSTLRLWRDAKRQMAAEVKS 361

Query: 362 WPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESKG 421
           WPY F+ S+++P   +RG++ G+ +++D +  + +++   AFVGLA  GE GSWQTESKG
Sbjct: 362 WPYDFITSEDYPLRHQRGTLEGQFLIKDSYVSRLKIYGKFAFVGLAPIGEAGSWQTESKG 421

Query: 422 YQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDPP 481
           YQFWT+AD+ G F I+N+R GNY+LYAW  G IGDYKY+ ++T+T  S  N+  L+Y+PP
Sbjct: 422 YQFWTKADRRGRFIIENVRAGNYSLYAWGSGFIGDYKYEQNITITPGSEMNVGPLVYEPP 481

Query: 482 RRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPDQ 541
           R GPTLWEIG+PDR A EFYIPDP PTLM+  Y N      D+FRQYG+W RYADLYP  
Sbjct: 482 RNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPL---QDRFRQYGLWDRYADLYPQN 541

Query: 542 DLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSSH 601
           DLVY +   DYR  WF+AHV R   +  YQ TTWQI+F L+   + G YTLR+ALAS++ 
Sbjct: 542 DLVYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRIALASAAD 601

Query: 602 GVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIYL 661
             + +R N+P +    FTTG+   G+DNAIARHGIHGLYRL++ DV    L  GDN I+L
Sbjct: 602 SELQIRINDPKS-DAIFTTGF--IGKDNAIARHGIHGLYRLYSIDVAGNLLSVGDNTIFL 661

Query: 662 TQRRHAGPFQGVMYDYIRFE 680
           TQ R   PFQG+MYDYIR E
Sbjct: 662 TQTRSRTPFQGIMYDYIRLE 672

[Close]

BLAST of CmoCh07G005880 vs. TAIR 10
Match: AT1G09890.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 706.1 bits (1821), Expect = 2.8e-203
Identity = 336/621 (54.11%), Postives = 430/621 (69.24%), Query Frame = 0


Query: 64  IDNGLIRVTFSH-EGNVIGIKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVKAT 123
           +DNG+ RVT S  +G V GI+YN +DN+L+  N   NR Y DL W         + +K +
Sbjct: 1   MDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLVWGGSGTAGGFDVIKGS 60

Query: 124 NVKVVTATGDQIELSFTRYWN-SSDPFSVPSNIDQRYILRRGDSGYYTYSIFERLENWPE 183
           N +V+    +QIELSFTR W+ S +  +VP NID+R+++  G SG+YTY+I+E L+ WP 
Sbjct: 61  NFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSSGFYTYAIYEHLKEWPA 120

Query: 184 LGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRM--TGQRLAYAEAVLITQPTNPDL 243
             + E RIA+K  ++KFHYMA++DDRQR MP   DR+   GQ LAY EAVL+  P     
Sbjct: 121 FSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQF 180

Query: 244 KGEVDDKYQYSQENMENRVHGWV-SRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTTL 303
           KGEVDDKYQYS EN +  VHGW+ +  P+VGFW+IT S E+R+GGP KQ LTSHVGPT L
Sbjct: 181 KGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTGGPQKQNLTSHVGPTAL 240

Query: 304 TVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIERG 363
            VF S HY G+D   +F EGEAWKKV GPVF+YLNS       P  LW+DAK+QM +E  
Sbjct: 241 AVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDPLWLWQDAKSQMNVEAE 300

Query: 364 KWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTESK 423
            WPY F  S ++  +E+RG+V GRL+V+DR+  K  + A+  +VGLA PG  GSWQ E K
Sbjct: 301 SWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYVGLAVPGAAGSWQRECK 360

Query: 424 GYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYDP 483
            YQFWTR D++G F+I  IRPG YNLYAW+PG IGDYKYD  +T+T+     +  L+Y P
Sbjct: 361 EYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVITITSGCYIYVEDLVYQP 420

Query: 484 PRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYPD 543
           PR G TLWEIG PDR AAEFY+PDP P  +++ Y N    +PD+FRQYG+W RYA+LYPD
Sbjct: 421 PRNGATLWEIGFPDRSAAEFYVPDPNPKYINNLYQN----HPDRFRQYGLWERYAELYPD 480

Query: 544 QDLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTGTYTLRLALASSS 603
           +DLVY V + DYR+ WFYA VTR  ++  YQ TTWQI F L+   K  +YTLR+A+AS++
Sbjct: 481 KDLVYVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASAT 540

Query: 604 HGVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNVIY 663
              + +R NN  A  P FT+G    GRDN+IARHGIHGLY LFN +V    L+EG+N ++
Sbjct: 541 FSELQIRVNNANA-SPMFTSGL--IGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLF 600

Query: 664 LTQRRHAGPFQGVMYDYIRFE 680
           LTQ R   PFQG+MYDYIRFE
Sbjct: 601 LTQPRSTSPFQGIMYDYIRFE 614

[Close]

BLAST of CmoCh07G005880 vs. TAIR 10
Match: AT1G09910.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 704.1 bits (1816), Expect = 1.1e-202
Identity = 340/624 (54.49%), Postives = 431/624 (69.07%), Query Frame = 0


Query: 62  VAIDNGLIRVTFSHEGNVI-GIKYNNMDNILDFHNAYNNRAYLDLAWNTPNQTSIIERVK 121
           V +DNG+++VT S  G +I GI+YN +DN+L+  N   NR Y DL WN P    I + + 
Sbjct: 58  VVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWNEPGGKGIFDVIS 117

Query: 122 ATNVKVVTATGDQIELSFTRYWNSS-DPFSVPSNIDQRYILRRGDSGYYTYSIFERLENW 181
               +V+  T +Q+E+SF R W+ S +   +P NID+R+I+ RG SG Y+Y I+E L++W
Sbjct: 118 GVTFRVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGVYSYGIYEHLKDW 177

Query: 182 PELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRMTG--QRLAYAEAVLITQPTNP 241
           P   + E RIA+K  +DKFHYMA++DDR+RIMP   D   G  Q L Y EA L+T P +P
Sbjct: 178 PGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQEASLLTAPCDP 237

Query: 242 DLKGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVGPTT 301
            L+GEVDDKYQYS EN + RVHGW+S DP VGFW IT S+EFRSGGP+KQ LTSHVGPTT
Sbjct: 238 RLQGEVDDKYQYSCENKDLRVHGWISFDPPVGFWQITPSNEFRSGGPLKQNLTSHVGPTT 297

Query: 302 LTVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMRIER 361
           L VF S HYAGK    RF+ GE WKKV GPVFIYLNS   G + P  LW+DAK +M  E 
Sbjct: 298 LAVFHSTHYAGKTMMPRFEHGEPWKKVYGPVFIYLNSTANG-DDPLCLWDDAKIKMMAEV 357

Query: 362 GKWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQTES 421
            +WPY FV S ++P SEERG+  GRL++RDRF     + A  A+VGLA PG+ GSWQ E 
Sbjct: 358 ERWPYSFVASDDYPKSEERGTARGRLLIRDRFINNDLISARGAYVGLAPPGDSGSWQIEC 417

Query: 422 KGYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVLIYD 481
           KGYQFW  AD+ G F I N+RPG YNLYAWVP  IGDY     V VT+     +  ++Y+
Sbjct: 418 KGYQFWAIADEAGYFSIGNVRPGEYNLYAWVPSFIGDYHNGTIVRVTSGCMIEMGDIVYE 477

Query: 482 PPRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQYGIWARYADLYP 541
           PPR GPTLWEIGIPDRKA+EF+IPDP+PTL+    N   + + D+FRQYG+W +Y D+YP
Sbjct: 478 PPRDGPTLWEIGIPDRKASEFFIPDPDPTLV----NRVLVHHQDRFRQYGLWKKYTDMYP 537

Query: 542 DQDLVYNVDTDDYRRHWFYAHVTRATESGD-YQATTWQIVFRLRGPIKTGTYTLRLALAS 601
           + DLVY V   DYRR WF+AHV R  + GD ++ TTWQI+F L    +   Y LR+A+AS
Sbjct: 538 NDDLVYTVGVSDYRRDWFFAHVPR--KKGDVHEGTTWQIIFNLENIDQKANYKLRVAIAS 597

Query: 602 SSHGVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVEGDNV 661
           ++   + +R N+  A RP FTTG    GRDN+IARHGIHG+Y L+  ++P   LV+GDN 
Sbjct: 598 ATLAELQIRINDAEAIRPLFTTGL--IGRDNSIARHGIHGVYMLYAVNIPGNRLVQGDNT 657

Query: 662 IYLTQRRHAGPFQGVMYDYIRFEG 681
           I+L Q R  GPFQG+MYDYIR EG
Sbjct: 658 IFLKQPRCNGPFQGIMYDYIRLEG 672

[Close]

BLAST of CmoCh07G005880 vs. TAIR 10
Match: AT1G09880.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 701.0 bits (1808), Expect = 9.1e-202
Identity = 336/627 (53.59%), Postives = 443/627 (70.65%), Query Frame = 0


Query: 64  IDNGLIRVTFSH-EGNVIGIKYNNMDNILDFH-NAYNNRAYLDLAWNTPNQTS-----II 123
           ++N  +++T S+ EG V GI+YN +DN+L ++ N   +R Y D+ WN P + +      +
Sbjct: 1   MENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRGYWDVVWNFPGKKAKKTKGTL 60

Query: 124 ERVKATNVKVVTATGDQIELSFTRYWNSSDPFSVPSNIDQRYILRRGDSGYYTYSIFERL 183
           +R++AT ++V+T   ++IELSFTR WN+S   +VP NID+R+++ +  SG+Y+Y+IFERL
Sbjct: 61  DRIEATKMEVITQNDEKIELSFTRTWNTSSTTAVPVNIDKRFVMLQNSSGFYSYAIFERL 120

Query: 184 ENWPELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRM--TGQRLAYAEAVLITQP 243
           + WP + +D +R+ +K  + KFHYMAISDDRQR MP   DR+   GQ LAY EAV +  P
Sbjct: 121 QGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDDRVPPRGQPLAYPEAVQLLDP 180

Query: 244 TNPDLKGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVG 303
             P+ KGEVDDKY+YS E+ + +VHGW+S + +VGFW IT S+EFRS GP+KQ L SHVG
Sbjct: 181 IEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLGSHVG 240

Query: 304 PTTLTVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMR 363
           PT L VF S HY G D  M FK GEAWKKV GPVFIYLNS P G + P  LW +AKNQ +
Sbjct: 241 PTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGPVFIYLNSFPKGVD-PLLLWHEAKNQTK 300

Query: 364 IERGKWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQ 423
           IE  KWPY F  S +FP S++RGSVSGRL+VRDRF     + A+ ++VGLAAPG+VGSWQ
Sbjct: 301 IEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDRFISSEDIPANGSYVGLAAPGDVGSWQ 360

Query: 424 TESKGYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVL 483
            E KGYQFW++AD++G+F I N+R G YNLYA+ PG IGDY  D    ++  S  +L  L
Sbjct: 361 RECKGYQFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDYHNDTVFDISPGSKISLGDL 420

Query: 484 IYDPPRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQYGIWARYAD 543
           +Y+PPR G TLWEIG+PDR AAEFYIPDP P+ ++  Y N    + DK+RQYG+W RY++
Sbjct: 421 VYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLN----HSDKYRQYGLWERYSE 480

Query: 544 LYPDQDLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIK--TGTYTLRL 603
           LYPD+D+VYNVD DDY ++WF+  VTR   +G Y+ TTWQI F+    +K  TG + LR+
Sbjct: 481 LYPDEDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRI 540

Query: 604 ALASSSHGVVDVRFNNPMARRPAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVE 663
           ALA+S+   + VR N+  A  P F T     GRDN IARHGIHGLY L++ +VP+  L  
Sbjct: 541 ALATSNVAELQVRVNDLSADPPLFRTE--QIGRDNTIARHGIHGLYWLYSVNVPAASLHV 600

Query: 664 GDNVIYLTQRRHAGPFQGVMYDYIRFE 680
           G+N IYLTQ     PFQG+MYDYIR E
Sbjct: 601 GNNTIYLTQALATSPFQGLMYDYIRLE 620

[Close]

BLAST of CmoCh07G005880 vs. TAIR 10
Match: AT4G24430.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 675.6 bits (1742), Expect = 4.1e-194
Identity = 329/629 (52.31%), Postives = 429/629 (68.20%), Query Frame = 0


Query: 62  VAIDNGLIRVTFSH-EGNVIGIKYNNMDNILDFHNAYNNRAYLDLAWN---TPNQTSIIE 121
           V + NG ++VT S  +G V GI Y  +DN+L+ HN   NR Y DL W+   TP  T   E
Sbjct: 16  VVMGNGKVKVTISKPDGFVTGISYQGVDNLLETHNEDFNRGYWDLVWSDEGTPGTTGKSE 75

Query: 122 RVKATNVKVVTATGDQIELSFTRYWNSSDPFSV-PSNIDQRYILRRGDSGYYTYSIFERL 181
           R+K T+ +VV    + +E+SF+R W+SS   S+ P N+D+R+I+R+  +G+Y+Y+IFE L
Sbjct: 76  RIKGTSFEVVVENEELVEISFSRKWDSSLQDSIAPINVDKRFIMRKDVTGFYSYAIFEHL 135

Query: 182 ENWPELGVDEIRIAYKALRDKFHYMAISDDRQRIMPTQLDRM--TGQRLAYAEAVLITQP 241
             WP   + + RI YK  +DKF YMAI+D+RQR MP   DR+   G+ LAY EAVL+  P
Sbjct: 136 AEWPAFNLPQTRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKRGRPLAYPEAVLLVHP 195

Query: 242 TNPDLKGEVDDKYQYSQENMENRVHGWVSRDPNVGFWMITASDEFRSGGPVKQELTSHVG 301
              + KGEVDDKY+YS EN + +VHGW+S + ++G W I  S+EFRSGG  KQ LTSHVG
Sbjct: 196 VEDEFKGEVDDKYEYSSENKDLKVHGWISHNLDLGCWQIIPSNEFRSGGLSKQNLTSHVG 255

Query: 302 PTTLTVFKSNHYAGKDASMRFKEGEAWKKVLGPVFIYLNSDPTGTETPGSLWEDAKNQMR 361
           P +L +F S HYAG+D  M+ K G++WKKV GPVF YLN  P  T  P SLW+DAKNQM 
Sbjct: 256 PISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKTSDPLSLWQDAKNQML 315

Query: 362 IERGKWPYGFVESKEFPCSEERGSVSGRLMVRDRFAKKGQMWADSAFVGLAAPGEVGSWQ 421
            E   WPY F  S++FP S++RG +SGRL+V D+F     + A+ AFVGLA PGEVGSWQ
Sbjct: 316 TEVQSWPYDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANGAFVGLAPPGEVGSWQ 375

Query: 422 TESKGYQFWTRADQDGNFFIQNIRPGNYNLYAWVPGVIGDYKYDGDVTVTAASSTNLSVL 481
            ESKGYQFWT AD DG F I +IR G YNL  +V G IGDY+Y+  + +TA    ++  +
Sbjct: 376 LESKGYQFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQLINITAGCDIDVGNI 435

Query: 482 IYDPPRRGPTLWEIGIPDRKAAEFYIPDPEPTLMSHFYNNTKIQNPDKFRQYGIWARYAD 541
           +Y+PPR GPT+WEIGIPDR AAEF++PDP P  ++  Y    I +PD+FRQYG+W RY +
Sbjct: 436 VYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLY----IGHPDRFRQYGLWERYTE 495

Query: 542 LYPDQDLVYNVDTDDYRRHWFYAHVTRATESGDYQATTWQIVFRLRGPIKTGTYTLRLAL 601
           LYP +DLV+ +   DY++ WF+AHVTR      YQ TTWQI F+L    K+ TY +R+AL
Sbjct: 496 LYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYKIRIAL 555

Query: 602 ASSSHGVVDVRFNNPMARR--PAFTTGYWNAGRDNAIARHGIHGLYRLFNFDVPSYYLVE 661
           A+++   + VR N+    +  P FTTG    G DNAIARHGIHG+YRL+N DVPS  LVE
Sbjct: 556 ATANVAELQVRMNDDDTEKTTPIFTTGV--IGHDNAIARHGIHGIYRLYNVDVPSEKLVE 615

Query: 662 GDNVIYLTQ-RRHAGPFQGVMYDYIRFEG 681
           GDN ++LTQ     G F G+MYDYIR EG
Sbjct: 616 GDNTLFLTQTMTTTGAFNGLMYDYIRLEG 638

The following BLAST results are available for this feature:

BLAST of CmoCh07G005880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RJP2	1.9e-31	25.00	Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=rhiE PE...	[more]

BLAST of CmoCh07G005880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHQ6	0.0e+00	100.00	Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111463085 PE=3 ...	[more]
A0A6J1IPB6	1.4e-290	68.93	Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111478723 PE=3 SV...	[more]
A0A1S3B1X3	2.0e-289	68.10	Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1	[more]
A0A0A0KIQ2	1.6e-283	68.65	Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_6G497340 PE=3 SV=...	[more]
A0A1S3B219	3.6e-283	72.07	Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1	[more]

BLAST of CmoCh07G005880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962664.1	0.0e+00	100.00	uncharacterized protein LOC111463085 [Cucurbita moschata]	[more]
KAG7026879.1	0.0e+00	96.33	rhiE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023518133.1	0.0e+00	96.07	probable rhamnogalacturonate lyase B [Cucurbita pepo subsp. pepo]	[more]
KAG6594914.1	0.0e+00	96.67	hypothetical protein SDJN03_11467, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038882453.1	4.9e-298	69.44	probable rhamnogalacturonate lyase B [Benincasa hispida]	[more]

BLAST of CmoCh07G005880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22620.1	7.2e-207	54.19	Rhamnogalacturonate lyase family protein	[more]
AT1G09890.1	2.8e-203	54.11	Rhamnogalacturonate lyase family protein	[more]
AT1G09910.1	1.1e-202	54.49	Rhamnogalacturonate lyase family protein	[more]
AT1G09880.1	9.1e-202	53.59	Rhamnogalacturonate lyase family protein	[more]
AT4G24430.1	4.1e-194	52.31	Rhamnogalacturonate lyase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.40.1120		coord: 372..474 e-value: 3.6E-11 score: 45.1
None	No IPR available	GENE3D	2.60.120.260		coord: 482..678 e-value: 1.3E-12 score: 49.6
None	No IPR available	PANTHER	PTHR32018:SF6	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	coord: 57..680
None	No IPR available	PANTHER	PTHR32018	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	coord: 57..680
None	No IPR available	CDD	cd10320	RGL4_N	coord: 61..337 e-value: 1.06589E-66 score: 218.412
None	No IPR available	CDD	cd10317	RGL4_C	coord: 486..679 e-value: 6.59088E-45 score: 155.896
IPR029411	Rhamnogalacturonan lyase, domain III	PFAM	PF14683	CBM-like	coord: 484..677 e-value: 1.7E-48 score: 164.7
IPR029413	Rhamnogalacturonan lyase, domain II	PFAM	PF14686	fn3_3	coord: 398..471 e-value: 4.2E-26 score: 90.6
IPR029413	Rhamnogalacturonan lyase, domain II	CDD	cd10316	RGL4_M	coord: 375..474 e-value: 2.49633E-34 score: 123.898
IPR010325	Rhamnogalacturonate lyase	PFAM	PF06045	Rhamnogal_lyase	coord: 50..243 e-value: 2.6E-65 score: 219.9
IPR014718	Glycoside hydrolase-type carbohydrate-binding	GENE3D	2.70.98.10		coord: 60..344 e-value: 2.1E-13 score: 52.3
IPR011013	Galactose mutarotase-like domain superfamily	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 150..337
IPR013784	Carbohydrate-binding-like fold	SUPERFAMILY	49452	Starch-binding domain-like	coord: 374..474
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 482..679

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G005880.1	CmoCh07G005880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0102210	rhamnogalacturonan endolyase activity
molecular_function	GO:0003824	catalytic activity