CmoCh07G005130 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G005130
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr07: 2344405 .. 2344653 (+)
RNA-Seq ExpressionCmoCh07G005130
SyntenyCmoCh07G005130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATATTGCCATTCTGGTCGCAGAGGAATACGAGAGGAGGATGAAGAATCCAAGGCAAGAACAGAAGGCGGCGGCAGAGGTTCAAGATTTGGTTTCTGGGGTTTCCATCTCTGCAACTGCGAGTAGGGTGAAGAAGATGATGGAATTGGAATTGGAATTGGCCCAACCAAATGAATTCAAATGGGTTTTTGAACCCAAATCCCAAATCGGGCGAGCCGCATCCACTGGATTCTTCTCCGCCTGA

mRNA sequence

ATGGCGGATATTGCCATTCTGGTCGCAGAGGAATACGAGAGGAGGATGAAGAATCCAAGGCAAGAACAGAAGGCGGCGGCAGAGGTTCAAGATTTGGTTTCTGGGGTTTCCATCTCTGCAACTGCGAGTAGGGTGAAGAAGATGATGGAATTGGAATTGGAATTGGCCCAACCAAATGAATTCAAATGGGTTTTTGAACCCAAATCCCAAATCGGGCGAGCCGCATCCACTGGATTCTTCTCCGCCTGA

Coding sequence (CDS)

ATGGCGGATATTGCCATTCTGGTCGCAGAGGAATACGAGAGGAGGATGAAGAATCCAAGGCAAGAACAGAAGGCGGCGGCAGAGGTTCAAGATTTGGTTTCTGGGGTTTCCATCTCTGCAACTGCGAGTAGGGTGAAGAAGATGATGGAATTGGAATTGGAATTGGCCCAACCAAATGAATTCAAATGGGTTTTTGAACCCAAATCCCAAATCGGGCGAGCCGCATCCACTGGATTCTTCTCCGCCTGA

Protein sequence

MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNEFKWVFEPKSQIGRAASTGFFSA
Homology
BLAST of CmoCh07G005130 vs. ExPASy TrEMBL
Match: A0A6J1HEA8 (uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC111463202 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.9e-35
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60
          MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

BLAST of CmoCh07G005130 vs. ExPASy TrEMBL
Match: A0A6J1KS29 (uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.9e-33
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60
          MADIAILVAEEYERRMKNPRQE+KAAAEVQDLVSGVSISATASRVKKMMELELELA+ NE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

BLAST of CmoCh07G005130 vs. ExPASy TrEMBL
Match: A0A0A0KK75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.7e-17
Identity = 61/89 (68.54%), Postives = 71/89 (79.78%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQK-AAAEVQDL-VSGVSISATAS--RVKKMMELELE-- 60
          MADIAILVAEEYERR KNPR+ Q+    E+Q+L  SGVSISATA+  R+KKMME+  +  
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 -LAQPNEFKWVFEPKSQIGRAASTGFFSA 83
            A+ +EF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

BLAST of CmoCh07G005130 vs. ExPASy TrEMBL
Match: A0A6J1BTY3 (uncharacterized protein LOC111005739 OS=Momordica charantia OX=3673 GN=LOC111005739 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.4e-17
Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATAS--RVKKMMELELELAQP 60
          MADIAILVAEEYERRMKNP  + K   E+    SGVSISATA+  R+K+M    L+L +P
Sbjct: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQM----LQLGKP 60

Query: 61 N-EFKWVFEPKSQIGRAASTGFFSA 83
          N +FKWV EPKSQIGRAAS GFFSA
Sbjct: 61 NADFKWVSEPKSQIGRAASAGFFSA 81

BLAST of CmoCh07G005130 vs. ExPASy TrEMBL
Match: A0A5A7T3Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002530 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.4e-16
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQK-AAAEVQDLVSGVSISATASRV--KKMMELELE--- 60
          MADIAILVAEEYERR K+PR++Q+    E+QDL SGVSISATA+ +  KKMME+      
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 LAQPNEFKWVFEPKSQIGRAASTGFFSA 83
           A+ +EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of CmoCh07G005130 vs. NCBI nr
Match: XP_022962826.1 (uncharacterized protein LOC111463202 [Cucurbita moschata])

HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60
          MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

BLAST of CmoCh07G005130 vs. NCBI nr
Match: KAG6594853.1 (hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.3 bits (386), Expect = 9.1e-34
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60
          MADIAILVAEEYERR KNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE
Sbjct: 1  MADIAILVAEEYERRTKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

BLAST of CmoCh07G005130 vs. NCBI nr
Match: KAG7026817.1 (hypothetical protein SDJN02_10824, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 4.5e-33
Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60
          MADIAILVAEEYERR KNPRQEQKAAAEVQDLVSGV ISATASRVKKMMELELELAQPNE
Sbjct: 1  MADIAILVAEEYERRTKNPRQEQKAAAEVQDLVSGVFISATASRVKKMMELELELAQPNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

BLAST of CmoCh07G005130 vs. NCBI nr
Match: XP_023003555.1 (uncharacterized protein LOC111497122 [Cucurbita maxima])

HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60
          MADIAILVAEEYERRMKNPRQE+KAAAEVQDLVSGVSISATASRVKKMMELELELA+ NE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

BLAST of CmoCh07G005130 vs. NCBI nr
Match: XP_023517526.1 (uncharacterized protein LOC111781261 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29
Identity = 79/88 (89.77%), Postives = 80/88 (90.91%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSIS----ATASRVKKMM--ELELE 60
          MADIAILVAEEYERRMKNPRQEQK AAE+QDLVSGVSIS    ATASRVKKMM  ELELE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKGAAELQDLVSGVSISATATATASRVKKMMELELELE 60

Query: 61 LAQPNEFKWVFEPKSQIGRAASTGFFSA 83
          LAQ NEFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 LAQQNEFKWVFEPKSQIGRAASTGFFSA 88

BLAST of CmoCh07G005130 vs. TAIR 10
Match: AT5G65207.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.1e-04
Identity = 33/82 (40.24%), Postives = 41/82 (50.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60
          MADIAILVAEEYERRMK+     +++    D    +    T +  K  +E          
Sbjct: 1  MADIAILVAEEYERRMKHTTVGSRSSPVEFDWWKIIPAKMTIAFDKMKIE---------S 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
           K  FE KS+   A S GFFSA
Sbjct: 61 LKKNFEAKSEFALAISHGFFSA 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HEA88.9e-35100.00uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
A0A6J1KS294.9e-3396.34uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122... [more]
A0A0A0KK753.7e-1768.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1[more]
A0A6J1BTY36.4e-1767.06uncharacterized protein LOC111005739 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A5A7T3Y61.4e-1667.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
XP_022962826.11.8e-34100.00uncharacterized protein LOC111463202 [Cucurbita moschata][more]
KAG6594853.19.1e-3498.78hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026817.14.5e-3397.56hypothetical protein SDJN02_10824, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023003555.11.0e-3296.34uncharacterized protein LOC111497122 [Cucurbita maxima][more]
XP_023517526.11.8e-2989.77uncharacterized protein LOC111781261 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G65207.12.1e-0440.24unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36067EXPRESSED PROTEINcoord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G005130.1CmoCh07G005130.1mRNA