CmoCh07G003380 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G003380
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr07: 1575321 .. 1578280 (-)
RNA-Seq Expression	CmoCh07G003380
Synteny	CmoCh07G003380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGCTATGGCTATGGCTATGGCTATGGCTATGGCCGCCCTATTTCTCTCACTTCCTCATCACCCATCACCTCCATTTCACCCTTCCAAATTCCAATGGCTTTGGCGTTTTCTTCTGCACCAAGTTTCGTCCATTTCCCCATCTCAATCTCAAACTCCAACATCCTCAACGTCCCCTCTCTTCCCACCACCAATAACTCCCGCCCATCGCCGGCACCGTCGGCCAAGCGTCGAGCCTCTCTGAGCGTAAAATGTCACGGCGGTGACGCCGAGCCGGACAAAAAAGACCCTTTTGAAACAATCGACAAACTTTACAAGGACATAAAGAACGAACACATCGCTCCCTTCCAACCCAAATCTGTAATTTTACCATCTCATCTCTCCTCCCTTACAAACCATCAAAACAGAGGGTTTGAATTTCTTGTTTCATTTTGCAGAGGAAGCCGAACTTCATCTCTAATTTCATCAATGCCTTACAGAAAAGAATAATATTCTTAGTGCAGCCAACAAATGATGGACCGATGGTGGGTGTTAAATGGAGAGTAGGTACATTCTCCAAACTAAAATCTCTTAGTTTATTTCAGTTTAGAGCCGAAATTTGAGAGGTTTAAGGTTGTTGGTAATGGCAGGGTGGCATAAACCCCTGATGGTGTGGGATAATGGTGTCGGCATCCATTTCCACCAAAGCTATGTTGGAAAGTTGCTTATTAGGTACTTGAATTCAATCTATTTGTTTCCATTTTCAACGTCTCTTCGAGCTTTCTGCCATAGACGCCAACTAAATCCTTCTCTGTTTCGTTTTTCTTTGAAACTGAATGAATTGGATTCAGCAACTTGGAGAATCTACTAGACCCTGTTCTTCGCCTAGCGCCCAAAACACTGGTGAGTGAACCTACACACCTTCTTTCTCATTCCATTAGGTACTCTTTCTATATGTTATATAAAACCCATCTCTTTCTAAGACTTACAAATTTGTGGGGAACAGAGGAATTGGAGTTGGGTGCAGGGAAAACAGAGGAGAGCTGCAGCCCTGTGTGTGGGTTTCTTCCTCCTCATTCTCTCGCTCTTCTTCTTCAAGTTTTGTGTTCGGTAGGGCCGGCGTTCTATAATTTGCAGAGCCGAACAAAGAAAGAAGGGACAGTCAACTTCTTATGCATTTCAAATACACACATAAATTTCTACTCAATTGTTTCAAAATTGCCCTTTCTACGATGTTTCAAGTATAATGCAAGTTCACTTTGTCATTTACATTAATTTTACCAAAATGCCATGGTCCCTCATGTGCTGTATTAACGATTTACTTGATTGGTGAGCGTACTATGCCAATTCGTCAACATTTTGTTAGCGATACTTATGATAAACACTCGATCGGTTGAATAGAAGTATATAGTATGAAGTTCATGAATTTAATAAATATATAAATAGGAGGATAGTGTCCAGGAGTTGGTTGAGTTAAAGTGAATCAATCCAAACTTATTACCTAATTTCATCCTTAAATTTGCCAAATTTGTATGCTAATCAATTAGTTTTAGTCTAAAAAGTCCACCTAAATTTCTCTCACGGACATTCTTACAGACATAATATGTAACAACGTACGCACGCGTTTTAAAACATAATATGTAACAACCCAAAACGGACAATATCGGTCAATTATGGACTTTGGATTGTTACGAATGATATCAAAGTTAGACATCGTGTGCCAACAAGGACATTAGGCTCGAAGGGAGGGTAGATTGTGAGATCCCACCTAAGTTGGAGAGGAGAACAAACATTCCGAGTGTGAAAACACCTCCCTCGTTTTAAAATCGTGAACCTGATGACGATACATAACGTACTGAAATAAACAATATAATATTATGTTGGGCAACAAAGATTCTTGCTTGCAACTAAATGAAAAGAACGAAAAAGGAGGTTCTTTCCTTGTGGGGGCACATTGAGAAGCCAAGTTTGCAACACTAGACGTTGCCCACCGCCCGCTGCCAAGCATCAACTCTATCTGTGCGTAAAATGCAATGGCAGCAACAAAAGCTGGGTGCCGGGAAAAGATGACAACGACAACGACAAGACTCTCAAAAGAGTCCACAAACTTTACGAGGTGATCAAGAACAAAAACATGAACCAGGTGTATGAGGTAATAGCAGATGAACTTCCCGATGCTTACAATTCCATCCCTGCAATACGAGTCTTCCGAGCCATATTGGTAATTTCACAAATCCCATCTACCTCTTTTTCTTTTTCGTCTTCTGTTGATAATGGTTTATTATGTATGTGTTGCAGTCAATGTTAGAATTCTTCTCTCATATCTCCAAGACCTTCGTAAACAGCCTGAAATTCACAGCGAAGCCAACAACAAAAAATGGATCGATGGCGGGTGTTAAATGGAAATTAGGGTGGCAGAGAACCCTGATGACGCTGGGAAAGGGAATCGATATCCAGTCTCACCATATCTATGTAGGAAAATTGCTTATTGGGTATTGGAAACTGTTTCTTTAGTCTCTTGCCAATTCCTTACCTTCTTCAAGTTCTCAACTTGCAAACTCAAACTTTCTTCGTTTTCTGTTTTCTTCGAATGAATTGGATTCAGTAACATGGAGAGGATAATGGATGCTTCGGTTCAGCAGAAGCCCATAGAAGAGGTGAGTGAAGTGTTCAGTACAGGAGATCTTACTTCTTCTTGGCTTAGATAATTTGTTAATACATATATATATATATGCAATGATCTTACTCCTAGCAACTGCAAATGCTTAGGAGCAGAAGGATTTGAATTTGGAGCCGTCAAAGAAGAGGCGAGCAGCACCATTGTATCTGGGCTTCTTCTTCTTTGTTCTCTCGCTCTTCTTCTTCCAGTTTTCTGTTCGTTAATGGCCGGCGTTTGAGGTGGCTACTAAAAAAGTGTTTCAGAATTGCCTTTTGAGCTGACTATAATCTTTCAATTATGATACATTTGAATCGGGG

mRNA sequence

ATGGCTATGGCTATGGCTATGGCTATGGCTATGGCTATGGCCGCCCTATTTCTCTCACTTCCTCATCACCCATCACCTCCATTTCACCCTTCCAAATTCCAATGGCTTTGGCGTTTTCTTCTGCACCAAGTTTCGTCCATTTCCCCATCTCAATCTCAAACTCCAACATCCTCAACGTCCCCTCTCTTCCCACCACCAATAACTCCCGCCCATCGCCGGCACCGTCGGCCAAGCGTCGAGCCTCTCTGAGCGTAAAATGTCACGGCGGTGACGCCGAGCCGGACAAAAAAGACCCTTTTGAAACAATCGACAAACTTTACAAGGACATAAAGAACGAACACATCGCTCCCTTCCAACCCAAATCTAGGAAGCCGAACTTCATCTCTAATTTCATCAATGCCTTACAGAAAAGAATAATATTCTTAGTGCAGCCAACAAATGATGGACCGATGGTGGGTGTTAAATGGAGAGTAGGGTGGCATAAACCCCTGATGGTGTGGGATAATGGTGTCGGCATCCATTTCCACCAAAGCTATGTTGGAAAGTTGCTTATTAGCAACTTGGAGAATCTACTAGACCCTGTTCTTCGCCTAGCGCCCAAAACACTGGTGAGTGAACCTACACACCTTCTTTCTCATTCCATTAGCAACAAAAGCTGGGTGCCGGGAAAAGATGACAACGACAACGACAAGACTCTCAAAAGAGTCCACAAACTTTACGAGGTGATCAAGAACAAAAACATGAACCAGGTGTATGAGGTAATAGCAGATGAACTTCCCGATGCTTACAATTCCATCCCTGCAATACGAGTCTTCCGAGCCATATTGTCAATGTTAGAATTCTTCTCTCATATCTCCAAGACCTTCGTAAACAGCCTGAAATTCACAGCGAAGCCAACAACAAAAAATGGATCGATGGCGGGTGTTAAATGGAAATTAGGGTGGCAGAGAACCCTGATGACGCTGGGAAAGGGAATCGATATCCAGTCTCACCATATCTATGTAGGAAAATTGCTTATTGGTAACATGGAGAGGATAATGGATGCTTCGGTTCAGCAGAAGCCCATAGAAGAGGAGCAGAAGGATTTGAATTTGGAGCCGTCAAAGAAGAGGCGAGCAGCACCATTGTATCTGGGCTTCTTCTTCTTTGTTCTCTCGCTCTTCTTCTTCCAGTTTTCTGTTCGTTAATGGCCGGCGTTTGAGGTGGCTACTAAAAAAGTGTTTCAGAATTGCCTTTTGAGCTGACTATAATCTTTCAATTATGATACATTTGAATCGGGG

Coding sequence (CDS)

ATGGCTTTGGCGTTTTCTTCTGCACCAAGTTTCGTCCATTTCCCCATCTCAATCTCAAACTCCAACATCCTCAACGTCCCCTCTCTTCCCACCACCAATAACTCCCGCCCATCGCCGGCACCGTCGGCCAAGCGTCGAGCCTCTCTGAGCGTAAAATGTCACGGCGGTGACGCCGAGCCGGACAAAAAAGACCCTTTTGAAACAATCGACAAACTTTACAAGGACATAAAGAACGAACACATCGCTCCCTTCCAACCCAAATCTAGGAAGCCGAACTTCATCTCTAATTTCATCAATGCCTTACAGAAAAGAATAATATTCTTAGTGCAGCCAACAAATGATGGACCGATGGTGGGTGTTAAATGGAGAGTAGGGTGGCATAAACCCCTGATGGTGTGGGATAATGGTGTCGGCATCCATTTCCACCAAAGCTATGTTGGAAAGTTGCTTATTAGCAACTTGGAGAATCTACTAGACCCTGTTCTTCGCCTAGCGCCCAAAACACTGGTGAGTGAACCTACACACCTTCTTTCTCATTCCATTAGCAACAAAAGCTGGGTGCCGGGAAAAGATGACAACGACAACGACAAGACTCTCAAAAGAGTCCACAAACTTTACGAGGTGATCAAGAACAAAAACATGAACCAGGTGTATGAGGTAATAGCAGATGAACTTCCCGATGCTTACAATTCCATCCCTGCAATACGAGTCTTCCGAGCCATATTGTCAATGTTAGAATTCTTCTCTCATATCTCCAAGACCTTCGTAAACAGCCTGAAATTCACAGCGAAGCCAACAACAAAAAATGGATCGATGGCGGGTGTTAAATGGAAATTAGGGTGGCAGAGAACCCTGATGACGCTGGGAAAGGGAATCGATATCCAGTCTCACCATATCTATGTAGGAAAATTGCTTATTGGTAACATGGAGAGGATAATGGATGCTTCGGTTCAGCAGAAGCCCATAGAAGAGGAGCAGAAGGATTTGAATTTGGAGCCGTCAAAGAAGAGGCGAGCAGCACCATTGTATCTGGGCTTCTTCTTCTTTGTTCTCTCGCTCTTCTTCTTCCAGTTTTCTGTTCGTTAA

Protein sequence

MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEPDKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGVKWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTLVSEPTHLLSHSISNKSWVPGKDDNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFRAILSMLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHIYVGKLLIGNMERIMDASVQQKPIEEEQKDLNLEPSKKRRAAPLYLGFFFFVLSLFFFQFSVR

Homology

[Close]

BLAST of CmoCh07G003380 vs. ExPASy TrEMBL
Match: A0A6J1ELN6 (uncharacterized protein LOC111433705 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433705 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 3.1e-92
Identity = 175/190 (92.11%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60
           MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP
Sbjct: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60

Query: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120
           DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV
Sbjct: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120

Query: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTLVSEPTHLLSHS 180
           KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL           
Sbjct: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL----------- 178

Query: 181 ISNKSWVPGK 191
             N SWV GK
Sbjct: 181 -RNWSWVQGK 178

[Close]

BLAST of CmoCh07G003380 vs. ExPASy TrEMBL
Match: A0A6J1EFQ1 (uncharacterized protein LOC111433705 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433705 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.7e-91
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60
           MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP
Sbjct: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60

Query: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120
           DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV
Sbjct: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120

Query: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL 170
           KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL
Sbjct: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL 169

[Close]

BLAST of CmoCh07G003380 vs. ExPASy TrEMBL
Match: A0A6J1KWE5 (uncharacterized protein LOC111497026 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497026 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 7.7e-91
Identity = 176/182 (96.70%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 182 SNKSWVPGKD--DNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR 241
           SNKSWVPGKD  DNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR
Sbjct: 87  SNKSWVPGKDDNDNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR 146

Query: 242 AILSMLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI 301
           AIL +LEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI
Sbjct: 147 AILPVLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI 206

Query: 302 YVGKLLIGNMERIMDASVQQKPIEEEQKDLNLEPSKKRRAAPLYLGFFFFVLSLFFFQFS 361
           YVGKLLIGNMERIMDASVQ+KPIEEEQKDLNLEP KKRRAAPLYLGFFFFVLSLFFFQFS
Sbjct: 207 YVGKLLIGNMERIMDASVQRKPIEEEQKDLNLEPPKKRRAAPLYLGFFFFVLSLFFFQFS 266

[Close]

BLAST of CmoCh07G003380 vs. ExPASy TrEMBL
Match: A0A6J1KT91 (uncharacterized protein LOC111497026 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497026 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 2.8e-88
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0


Query: 182 SNKSWVPGKD--DNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR 241
           SNKSWVPGKD  DNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR
Sbjct: 87  SNKSWVPGKDDNDNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR 146

Query: 242 AILSMLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI 301
           AIL +LEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI
Sbjct: 147 AILPVLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI 206

Query: 302 YVGKLLIGNMERIMDASVQQKPIEEEQKDLNLEPSKKRRAAPLYLGFFFFVLSLFFFQFS 361
           YVGKLLIGNMERIMDASVQ+KPIEE  KDLNLEP KKRRAAPLYLGFFFFVLSLFFFQFS
Sbjct: 207 YVGKLLIGNMERIMDASVQRKPIEE--KDLNLEPPKKRRAAPLYLGFFFFVLSLFFFQFS 266

[Close]

BLAST of CmoCh07G003380 vs. ExPASy TrEMBL
Match: A0A6J1KMF7 (uncharacterized protein LOC111497027 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497027 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 4.4e-86
Identity = 163/190 (85.79%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60
           MALAFSSAPSF+HFPISISNSNILN PSLPTTNN RPSPAPSAKRRASLSVKCHGGDAEP
Sbjct: 106 MALAFSSAPSFIHFPISISNSNILNAPSLPTTNNPRPSPAPSAKRRASLSVKCHGGDAEP 165

Query: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120
           DK+DPFETIDKLYKDIKNEH APFQPKSRKPNF+SNFI +LQKRIIFLVQPTNDG  VGV
Sbjct: 166 DKEDPFETIDKLYKDIKNEHFAPFQPKSRKPNFVSNFIESLQKRIIFLVQPTNDGSTVGV 225

Query: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTLVSEPTHLLSHS 180
           KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENL+ PVLRLAPKTL           
Sbjct: 226 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLIGPVLRLAPKTL----------- 283

Query: 181 ISNKSWVPGK 191
             N SWVP K
Sbjct: 286 -RNWSWVPIK 283

[Close]

BLAST of CmoCh07G003380 vs. NCBI nr
Match: XP_023518450.1 (uncharacterized protein LOC111781941 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 1.7e-92
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 182 SNKSWVPGKDDNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFRAI 241
           SNKSWVPGKDDNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFRAI
Sbjct: 96  SNKSWVPGKDDNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFRAI 155

Query: 242 LSMLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHIYV 301
           L +LEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHIYV
Sbjct: 156 LPVLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHIYV 215

Query: 302 GKLLIGNMERIMDASVQQKPIEEEQKDLNLEPSKKRRAAPLYLGFFFFVLSLFFFQFSVR 361
           GKLLIGNMERIMDASVQQKPIEEEQKDLNLEP KKRRAAPLYLGFFFFVLSLFFFQFSVR
Sbjct: 216 GKLLIGNMERIMDASVQQKPIEEEQKDLNLEPPKKRRAAPLYLGFFFFVLSLFFFQFSVR 275

[Close]

BLAST of CmoCh07G003380 vs. NCBI nr
Match: XP_022926630.1 (uncharacterized protein LOC111433705 isoform X2 [Cucurbita moschata])

HSP 1 Score: 348.6 bits (893), Expect = 6.5e-92
Identity = 175/190 (92.11%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60
           MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP
Sbjct: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60

Query: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120
           DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV
Sbjct: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120

Query: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTLVSEPTHLLSHS 180
           KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL           
Sbjct: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL----------- 178

Query: 181 ISNKSWVPGK 191
             N SWV GK
Sbjct: 181 -RNWSWVQGK 178

[Close]

BLAST of CmoCh07G003380 vs. NCBI nr
Match: XP_022926629.1 (uncharacterized protein LOC111433705 isoform X1 [Cucurbita moschata])

HSP 1 Score: 345.5 bits (885), Expect = 5.5e-91
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60
           MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP
Sbjct: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60

Query: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120
           DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV
Sbjct: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120

Query: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL 170
           KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL
Sbjct: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL 169

[Close]

BLAST of CmoCh07G003380 vs. NCBI nr
Match: XP_023003403.1 (uncharacterized protein LOC111497026 isoform X1 [Cucurbita maxima])

HSP 1 Score: 344.0 bits (881), Expect = 1.6e-90
Identity = 176/182 (96.70%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 182 SNKSWVPGKD--DNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR 241
           SNKSWVPGKD  DNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR
Sbjct: 87  SNKSWVPGKDDNDNDNDKTLKRVHKLYEVIKNKNMNQVYEVIADELPDAYNSIPAIRVFR 146

Query: 242 AILSMLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI 301
           AIL +LEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI
Sbjct: 147 AILPVLEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHI 206

Query: 302 YVGKLLIGNMERIMDASVQQKPIEEEQKDLNLEPSKKRRAAPLYLGFFFFVLSLFFFQFS 361
           YVGKLLIGNMERIMDASVQ+KPIEEEQKDLNLEP KKRRAAPLYLGFFFFVLSLFFFQFS
Sbjct: 207 YVGKLLIGNMERIMDASVQRKPIEEEQKDLNLEPPKKRRAAPLYLGFFFFVLSLFFFQFS 266

[Close]

BLAST of CmoCh07G003380 vs. NCBI nr
Match: KAG6594695.1 (hypothetical protein SDJN03_11248, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.2 bits (879), Expect = 2.7e-90
Identity = 172/190 (90.53%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 1   MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 60
           MALAFSSAPSF+HFPISISNSNILN PSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP
Sbjct: 111 MALAFSSAPSFIHFPISISNSNILNAPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEP 170

Query: 61  DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGPMVGV 120
           DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDG MVGV
Sbjct: 171 DKKDPFETIDKLYKDIKNEHIAPFQPKSRKPNFISNFINALQKRIIFLVQPTNDGSMVGV 230

Query: 121 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTLVSEPTHLLSHS 180
           KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL           
Sbjct: 231 KWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTL----------- 288

Query: 181 ISNKSWVPGK 191
             N SWV GK
Sbjct: 291 -RNWSWVRGK 288

[Close]

BLAST of CmoCh07G003380 vs. TAIR 10
Match: AT4G22370.1 (unknown protein; Has 12 Blast hits to 12 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 6.9e-07
Identity = 26/70 (37.14%), Postives = 38/70 (54.29%), Query Frame = 0


Query: 245 LEFFSHISKTFVNSLKFTAKPTTKNGSMAGVKWKLGWQRTLMTLGKGIDIQSHHIYVGKL 304
           + FF  +       +K   KPT K+G   GV+W+L   ++ + LGKG      H+Y GKL
Sbjct: 1   MAFFYWLIMKLGKDIKIIVKPTFKDGMTVGVQWQLECDKSHIQLGKGFSFHICHMYQGKL 60

Query: 305 LIGNMERIMD 315
           LI N+E  M+
Sbjct: 61  LIKNVEMFME 70

The following BLAST results are available for this feature:

BLAST of CmoCh07G003380 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh07G003380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELN6	3.1e-92	92.11	uncharacterized protein LOC111433705 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EFQ1	2.7e-91	100.00	uncharacterized protein LOC111433705 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KWE5	7.7e-91	96.70	uncharacterized protein LOC111497026 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KT91	2.8e-88	95.60	uncharacterized protein LOC111497026 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KMF7	4.4e-86	85.79	uncharacterized protein LOC111497027 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmoCh07G003380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518450.1	1.7e-92	98.33	uncharacterized protein LOC111781941 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022926630.1	6.5e-92	92.11	uncharacterized protein LOC111433705 isoform X2 [Cucurbita moschata]	[more]
XP_022926629.1	5.5e-91	100.00	uncharacterized protein LOC111433705 isoform X1 [Cucurbita moschata]	[more]
XP_023003403.1	1.6e-90	96.70	uncharacterized protein LOC111497026 isoform X1 [Cucurbita maxima]	[more]
KAG6594695.1	2.7e-90	90.53	hypothetical protein SDJN03_11248, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh07G003380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22370.1	6.9e-07	37.14	unknown protein; Has 12 Blast hits to 12 proteins in 6 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..64
None	No IPR available	PANTHER	PTHR33698	NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN	coord: 82..172
None	No IPR available	PANTHER	PTHR33698:SF6	TRANSMEMBRANE PROTEIN	coord: 82..172 coord: 189..321
None	No IPR available	PANTHER	PTHR33698	NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN	coord: 189..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G003380.1	CmoCh07G003380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane