CmoCh07G003040 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTTGGTTTGCTTTCTTCAGATTTTCAGGAATGAACGTCCCGAAGAATTAATGGATTTGAATCAGCTTTTGAAAGGTTTTCTACATTCGGACAAACGGGGTGTATGAAGTCCAACTCCGCCATAATTCCTTCGCTTAGGATTCCAATATCTGTTTCTTGCTCCTCTGCCAATGCCCATTTTCAGAGAATATTCTCCAATTTGAGACCGTCTTTTACCGCAGAGGCCGAGCCCCAACACCGACGCCCACATTTTCCTTTCCCCCCAAATTTGTTCGCGTCTATGGGAATGGAAATTGCATATATTATGCTTACGTCTATGCTTACACCTTACTTTTACGCAACTGCAACGGAAGTCTTCCCAGTCCACGCCCACTGCGCCATTTCCTGACCGACGTGTTACTGTGCGAGGAAATTATGACATGCTATTTGCTAAGCATGGTCTGCGTGTCCAACACACGGTTGCATCGAGGCATTCCAGGCCCACTGCGTATAAGGTGTTCGATGAAAAGTCGCAACCGGAATTATGAGGCTCGCTTTCAACAGTGGCTTTTTGGTATGTTTCCTTAAAGACATGCACTGCTTTCGTCATATATCCATGGATGAATTTCTCCCATTGATGCTTTTTGTACGCCTCCGTTACTTAATGATCAAGTATCTATCTTCATAAAGTAAAAACATTAGAATTCTTGAGTTTGATTACTGTGGAATTATCAGAAACGGTGTTGGGTATATTGGTTGCAGCATATGATTGGTGGGATTTGGGTTGCTTACACTTACATCTACTGCATTTTTTTTGTAACTTGATGCCAAAGGAATGTCTGAAAAGAGGACCAAAAGAATGTCCAGAATGAAGAAATTATATCCCCTAAGAAAATTGGGGACAACTTTTTCAGTTTTTTCAGCCATCTGTTTTCACCCAATCATAGATATAGTTGAATAAAGAGCAGGCCAGAAATTCTGCCTCTCCAAACTTTCCATTTCCCAATCAAACACCATGGAGACTAAACGGTCCCTTCTGAGTTGCGAAAAGCAGCACAAAAGGCCAAATGAATGCAACAGAATCTCACATACTATTTATTATCGTCTACTTCTGCTGTTTCATTCTCTCTCTCTATGAGGCATAAAGTGGGTTTGAACTGAGCTTGGTACTCTTTTTAAGGGTCTTTTTCCACGTCCCCTTCAAGACTTATGCATCAACATAATCATTATTCAACTTAACATGAGGGTTTCTAGGCGGAGAGTATTGAGCAGCAGTTTCCATGATATCAACTTCAGACCCCCCATGGTTAGACCTTATGTTCGGTCCAAAATGCCCAGATTAAGATGGACGCCTGATCTCCATCGCTGCTTTGTTCATGCAGTTGAACGCCTGGGTGGAGAAGAGAGTAAGCTTGAGCTAATCCATCATGAATCTCTGTCAAGTTCTCTTCTTTTTCCTCTTCATTTTTACTCTTCTGATATTCAAATGAAACATTTTTTGGTTTTTCTTGCAGGAGCTACTCCAAAGATGGTATTACAGATAATGAATGTGAATGGTCTTACCATATCTCACGTAAAAAGCCATCTACAGGTGCAGATTTGTAGCTTTTTATGATTCGTTGTTACCCTTTTTCTCTCCTCTTCTGCTGGCAGCTTATGAACGTTCTTAATTAGTTTAATAATGCTTAGGTTTGCCATGGACAGATGTATAGGAGCTCAAAACAGGAGCAAGAAACGCCTCAAGGTTCTTCATTCCTATTTCTTATTTCAAGTTTACAACCTCTGTTCCTGTATGTTTATGCTTATATTCTTGAACAAGCATCGATCACCCTGGTCATAGTCAGATTTTTAAGTCAAAAACTGCAAATATAACATAATATATGCTTGCTCCTTGTGACAGTGAAAAAACTCAACAACCATGAGGTTCCAGGGCATCAACTTCCTGACCAGCTCCATGGACGTCGCTTCATCCATCAGAAACTTGCTCGGTTTGTGATTCTCTCCATACTCTTGATTACTGCAATGAAGTTTGGCATATATATAATACCAGAAGGTCTTTCAAGGAAAGAATCATACACTAGATGGCAAGCAATAGTAAAAGCACTATTTTATATCTCATGCATACATGATGAACAGTGTTTGCAACTTTAGGAAGGGGAGGGTGTTGTTAGGCTGATAAGGGGAAGAAGAGGGGATATATGCTTTTTTCGATCATTAGATCGATTTACAGAGAAAGTTTCTTTTCCAGGAAAGAGAAGCAAGAGATATCAAATGAACAAAGAAAGTGTAAAGAGAAGAAACCAAATTCTTACCTCATCTTCAAGGACATAACAAAACGGTGCACTGTTCAGGTACTCTCTCGCTCTGTACTTTCTCATATTCATATTCAAGATTCTTCATCAAACCACTCGGATTTGTTTGCTAAAGTAACTATTTTTGTTTCTAGTTTAAACCCAATTTTGTTTTCTTGTGATTCCTCACATTGGTTTGAGAGAGAAACGAAACATTCCTTATAAGAATGTAGAAACCTCTCCCTCCTCCTATGGACGTGTTTTAAAATCACGAGGGGAGTGATAATATCGGCTAGCGGTGTTACAAATGGTATCAGAGTCCGACACTGAGCGGTGTGCCAGCAAAGACGTTGACCCCCGAGTGGGGTGGAGTAGGGAACGAAGCATTCCTTATGAGGACGTGGAAACTTCTATCTAGTGCAGTCGTTTTAAAATTTTGAGGGAAATCCCAAAAGAAAAAACCCAAAAAAGACATTTTATACTTAGTGTGTTGGGCGGTTGAAGAAACAAGAAATATTAAAAACAAGAAACGGAACTAAGTTCAGTTTATTATAAACTATGCTCCTATTTTCAGGAACAAGATTGTTTTGGGAGTTCGAAGAGCCATGAAGATTTGAAAAGGTTGGGTCATAGCAACGCTGTAGAGAGAGTTGGCTATGAAACAATGTCTCTATGTCTGAGCTTAAGGTCTTTCCAGCCATTGATACTGAGTAAAGCTGCGAATTCTGATGTTAATGATGTGTCTCTCGAGCTTAGTCTTGCTTGAACTCAACAGCCAGTCGGATATAAAAATGTTGCAGGTTCCACCAAACACTTGAAATCAAACTCAGAAAATATATCTCATTCACGAGTTCTTCCTGCTTCATCACTTCCTTATTTCATGAAATCATTTTATAATAAAACTTTGGTATAAAGCCTCCTTATTTTGTTA TGCTTTGGTTTGCTTTCTTCAGATTTTCAGGAATGAACGTCCCGAAGAATTAATGGATTTGAATCAGCTTTTGAAAGGTTTTCTACATTCGGACAAACGGGGTGTATGAAGTCCAACTCCGCCATAATTCCTTCGCTTAGGATTCCAATATCTGTTTCTTGCTCCTCTGCCAATGCCCATTTTCAGAGAATATTCTCCAATTTGAGACCGTCTTTTACCGCAGAGGCCGAGCCCCAACACCGACGCCCACATTTTCCTTTCCCCCCAAATTTGTTCGCGTCTATGGGAATGGAAATTGCATATATTATGCTTACGTCTATGCTTACACCTTACTTTTACGCAACTGCAACGGAAGTCTTCCCAGTCCACGCCCACTGCGCCATTTCCTGACCGACGTGTTACTGTGCGAGGAAATTATGACATGCTATTTGCTAAGCATGGTCTGCGTGTCCAACACACGGTTGCATCGAGGCATTCCAGGCCCACTGCGTATAAGGTGTTCGATGAAAAGTCGCAACCGGAATTATGAGGCTCGCTTTCAACAGTGGCTTTTTGGGTCTTTTTCCACGTCCCCTTCAAGACTTATGCATCAACATAATCATTATTCAACTTAACATGAGGGTTTCTAGGCGGAGAGTATTGAGCAGCAGTTTCCATGATATCAACTTCAGACCCCCCATGGTTAGACCTTATGTTCGGTCCAAAATGCCCAGATTAAGATGGACGCCTGATCTCCATCGCTGCTTTGTTCATGCAGTTGAACGCCTGGGTGGAGAAGAGAGAGCTACTCCAAAGATGGTATTACAGATAATGAATGTGAATGGTCTTACCATATCTCACGTAAAAAGCCATCTACAGGTTTGCCATGGACAGATGTATAGGAGCTCAAAACAGGAGCAAGAAACGCCTCAAGTGAAAAAACTCAACAACCATGAGGTTCCAGGGCATCAACTTCCTGACCAGCTCCATGGACGTCGCTTCATCCATCAGAAACTTGCTCGGAAAGAGAAGCAAGAGATATCAAATGAACAAAGAAAGTGTAAAGAGAAGAAACCAAATTCTTACCTCATCTTCAAGGACATAACAAAACGGTGCACTGTTCAGGAACAAGATTGTTTTGGGAGTTCGAAGAGCCATGAAGATTTGAAAAGGTTGGGTCATAGCAACGCTGTAGAGAGAGTTGGCTATGAAACAATGTCTCTATGTCTGAGCTTAAGGTCTTTCCAGCCATTGATACTGAGTAAAGCTGCGAATTCTGATGTTAATGATGTGTCTCTCGAGCTTAGTCTTGCTTGAACTCAACAGCCAGTCGGATATAAAAATGTTGCAGGTTCCACCAAACACTTGAAATCAAACTCAGAAAATATATCTCATTCACGAGTTCTTCCTGCTTCATCACTTCCTTATTTCATGAAATCATTTTATAATAAAACTTTGGTATAAAGCCTCCTTATTTTGTTA ATGAGGCTCGCTTTCAACAGTGGCTTTTTGGGTCTTTTTCCACGTCCCCTTCAAGACTTATGCATCAACATAATCATTATTCAACTTAACATGAGGGTTTCTAGGCGGAGAGTATTGAGCAGCAGTTTCCATGATATCAACTTCAGACCCCCCATGGTTAGACCTTATGTTCGGTCCAAAATGCCCAGATTAAGATGGACGCCTGATCTCCATCGCTGCTTTGTTCATGCAGTTGAACGCCTGGGTGGAGAAGAGAGAGCTACTCCAAAGATGGTATTACAGATAATGAATGTGAATGGTCTTACCATATCTCACGTAAAAAGCCATCTACAGGTTTGCCATGGACAGATGTATAGGAGCTCAAAACAGGAGCAAGAAACGCCTCAAGTGAAAAAACTCAACAACCATGAGGTTCCAGGGCATCAACTTCCTGACCAGCTCCATGGACGTCGCTTCATCCATCAGAAACTTGCTCGGAAAGAGAAGCAAGAGATATCAAATGAACAAAGAAAGTGTAAAGAGAAGAAACCAAATTCTTACCTCATCTTCAAGGACATAACAAAACGGTGCACTGTTCAGGAACAAGATTGTTTTGGGAGTTCGAAGAGCCATGAAGATTTGAAAAGGTTGGGTCATAGCAACGCTGTAGAGAGAGTTGGCTATGAAACAATGTCTCTATGTCTGAGCTTAAGGTCTTTCCAGCCATTGATACTGAGTAAAGCTGCGAATTCTGATGTTAATGATGTGTCTCTCGAGCTTAGTCTTGCTTGA MRLAFNSGFLGLFPRPLQDLCINIIIIQLNMRVSRRRVLSSSFHDINFRPPMVRPYVRSKMPRLRWTPDLHRCFVHAVERLGGEERATPKMVLQIMNVNGLTISHVKSHLQVCHGQMYRSSKQEQETPQVKKLNNHEVPGHQLPDQLHGRRFIHQKLARKEKQEISNEQRKCKEKKPNSYLIFKDITKRCTVQEQDCFGSSKSHEDLKRLGHSNAVERVGYETMSLCLSLRSFQPLILSKAANSDVNDVSLELSLA Homology
BLAST of CmoCh07G003040 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 7.5e-21 Identity = 56/111 (50.45%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.6e-15 Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy Swiss-Prot
Match: Q8GUN5 (Protein PHR1-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=PHL1 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.8e-14 Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy Swiss-Prot
Match: B8ANX9 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. indica OX=39946 GN=PHR1 PE=3 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.1e-14 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy TrEMBL
Match: A0A6J1EJL4 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433904 PE=4 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 5.2e-142 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy TrEMBL
Match: A0A6J1KXG0 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497226 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 2.7e-138 Identity = 250/256 (97.66%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy TrEMBL
Match: A0A6J1EGK4 (myb family transcription factor PHL5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433904 PE=4 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 1.9e-136 Identity = 251/256 (98.05%), Postives = 251/256 (98.05%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy TrEMBL
Match: A0A6J1KU47 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497226 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 9.9e-133 Identity = 245/256 (95.70%), Postives = 249/256 (97.27%), Query Frame = 0
BLAST of CmoCh07G003040 vs. ExPASy TrEMBL
Match: A0A6J1EMH1 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111433904 PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 3.8e-124 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of CmoCh07G003040 vs. NCBI nr
Match: XP_022926938.1 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 513.5 bits (1321), Expect = 1.1e-141 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of CmoCh07G003040 vs. NCBI nr
Match: XP_023518345.1 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 505.0 bits (1299), Expect = 3.8e-139 Identity = 253/256 (98.83%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of CmoCh07G003040 vs. NCBI nr
Match: XP_023003718.1 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 501.1 bits (1289), Expect = 5.6e-138 Identity = 250/256 (97.66%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of CmoCh07G003040 vs. NCBI nr
Match: XP_022926939.1 (myb family transcription factor PHL5-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 495.0 bits (1273), Expect = 4.0e-136 Identity = 251/256 (98.05%), Postives = 251/256 (98.05%), Query Frame = 0
BLAST of CmoCh07G003040 vs. NCBI nr
Match: XP_023518346.1 (protein PHOSPHATE STARVATION RESPONSE 2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 486.5 bits (1251), Expect = 1.4e-133 Identity = 248/256 (96.88%), Postives = 249/256 (97.27%), Query Frame = 0
BLAST of CmoCh07G003040 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 110.2 bits (274), Expect = 2.6e-24 Identity = 54/77 (70.13%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of CmoCh07G003040 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 108.2 bits (269), Expect = 9.8e-24 Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 0
BLAST of CmoCh07G003040 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 2.8e-23 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of CmoCh07G003040 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 102.4 bits (254), Expect = 5.4e-22 Identity = 56/111 (50.45%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of CmoCh07G003040 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 102.1 bits (253), Expect = 7.0e-22 Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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