Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATCTACATCATCATAGAAGCGCTCCACCGCCAATACGATAATTTCCATCGCTCTTTGATCGATTACTGCCCTTAGTCTCCGCCGTTCCTTTGCTCCGTTGACATTGAACCCCCAGGAACTGAGCGAAATGGCCACTTCTGCATTATTACAAGCCATTCCGGCGAGATCGGCATCTCGAACTACCCTTAGGACACCAACGAACCGGTTGTGTTCCAGGAGGACGGCCTCCTTCCGTGTGCGATGCACGGCGGAGGTAATCATTATTTTGTCTTCACTTTTATTCTTTGTATATACAACCTAGGGCTTAATGTATGTCTAAATCTGTTTATTCGACTGGACTCTCAGGAGGAGCAGAGAGAGCAAGCGATTCCTACACCAGCTCCGCCGACGTCAAATCCGTCCCCTCCGCCACCGTCTCCGAAGCCGAAGGTAAACAATCCGTTTACATCCACCAGCCGTTCTCAATCGACGGATCGAACCGTAACAGATCGTAGATGAACATTGTCTTTAAATATCATCGTTAATTTCGAATCTGATAATATGATCCTCAGGTGAGCACGAAATTCTCGGACGTCCTCGCATTCAGCGGGCCAGCGCCAGAGAGAATCAACGGGCGGCTAGCAATGATAGGCTTTGTGGCCGCTGTAGCGGTTGAGGCATGGAAAGGTCAGGATGTATTGGAGCAAATAGGCAACGGAGGAATTCCATGGTTTGTGGGAACGAGCGTGGTTTTGACACTGGCATCGCTGATTCCGCTATTTAAAGGGGTGAGTGTGGAGTCTAAGTCGAAGGGGCTTATGACATCCGACGCGGAGCTGTGGAATGGGAGGTTTGCGATGTTGGGGCTCGTAGCTTTGGCCTTCACTGAATTTGTCAAGGGTGGAAGCCTCGTGTAGATTGTAGTTCTGAGATGTAGATTCGATGTCTCTAAGAGAACAACGAATATGTTACTTAATAGTTTTCTGTAACAATGATTATTAGTAATACTTCTTCGTTTGCCTATATGTTATTTTTTGTGTTTCTAATTAATTATGTGTACCAATAGCTATTAGTGCACTAATTAACATTTAATTTGAAC
mRNA sequence
CTCATCTACATCATCATAGAAGCGCTCCACCGCCAATACGATAATTTCCATCGCTCTTTGATCGATTACTGCCCTTAGTCTCCGCCGTTCCTTTGCTCCGTTGACATTGAACCCCCAGGAACTGAGCGAAATGGCCACTTCTGCATTATTACAAGCCATTCCGGCGAGATCGGCATCTCGAACTACCCTTAGGACACCAACGAACCGGTTGTGTTCCAGGAGGACGGCCTCCTTCCGTGTGCGATGCACGGCGGAGGAGGAGCAGAGAGAGCAAGCGATTCCTACACCAGCTCCGCCGACGTCAAATCCGTCCCCTCCGCCACCGTCTCCGAAGCCGAAGGTAAACAATCCGTTTACATCCACCAGCCGTTCTCAATCGACGGATCGAACCGTGAGCACGAAATTCTCGGACGTCCTCGCATTCAGCGGGCCAGCGCCAGAGAGAATCAACGGGCGGCTAGCAATGATAGGCTTTGTGGCCGCTGTAGCGGTTGAGGCATGGAAAGGTCAGGATGTATTGGAGCAAATAGGCAACGGAGGAATTCCATGGTTTGTGGGAACGAGCGTGGTTTTGACACTGGCATCGCTGATTCCGCTATTTAAAGGGGTGAGTGTGGAGTCTAAGTCGAAGGGGCTTATGACATCCGACGCGGAGCTGTGGAATGGGAGGTTTGCGATGTTGGGGCTCGTAGCTTTGGCCTTCACTGAATTTGTCAAGGGTGGAAGCCTCGTGTAGATTGTAGTTCTGAGATGTAGATTCGATGTCTCTAAGAGAACAACGAATATGTTACTTAATAGTTTTCTGTAACAATGATTATTAGTAATACTTCTTCGTTTGCCTATATGTTATTTTTTGTGTTTCTAATTAATTATGTGTACCAATAGCTATTAGTGCACTAATTAACATTTAATTTGAAC
Coding sequence (CDS)
ATGGCCACTTCTGCATTATTACAAGCCATTCCGGCGAGATCGGCATCTCGAACTACCCTTAGGACACCAACGAACCGGTTGTGTTCCAGGAGGACGGCCTCCTTCCGTGTGCGATGCACGGCGGAGGAGGAGCAGAGAGAGCAAGCGATTCCTACACCAGCTCCGCCGACGTCAAATCCGTCCCCTCCGCCACCGTCTCCGAAGCCGAAGGTAAACAATCCGTTTACATCCACCAGCCGTTCTCAATCGACGGATCGAACCGTGAGCACGAAATTCTCGGACGTCCTCGCATTCAGCGGGCCAGCGCCAGAGAGAATCAACGGGCGGCTAGCAATGATAGGCTTTGTGGCCGCTGTAGCGGTTGAGGCATGGAAAGGTCAGGATGTATTGGAGCAAATAGGCAACGGAGGAATTCCATGGTTTGTGGGAACGAGCGTGGTTTTGACACTGGCATCGCTGATTCCGCTATTTAAAGGGGTGAGTGTGGAGTCTAAGTCGAAGGGGCTTATGACATCCGACGCGGAGCTGTGGAATGGGAGGTTTGCGATGTTGGGGCTCGTAGCTTTGGCCTTCACTGAATTTGTCAAGGGTGGAAGCCTCGTGTAG
Protein sequence
MATSALLQAIPARSASRTTLRTPTNRLCSRRTASFRVRCTAEEEQREQAIPTPAPPTSNPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLAMIGFVAAVAVEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGRFAMLGLVALAFTEFVKGGSLV
Homology
BLAST of CmoCh06G013820 vs. ExPASy Swiss-Prot
Match:
P93735 (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELIP1 PE=1 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 3.9e-49
Identity = 115/192 (59.90%), Postives = 136/192 (70.83%), Query Frame = 0
Query: 18 TTLRTPTNRLCS-------RRTASFRVRCTAE-EEQREQAIPTPAPPTSNPSPPPPSPKP 77
TT + TN+L S +R VRC AE E + P P+ + P P PSP P
Sbjct: 17 TTRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGGPTNEDSSPAPSTSAAQPLPKSPSPPP 76
Query: 78 KVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLAMIGFVAAVAVEAWKGQDV 137
+ VSTKFSD+LAFSGPAPERINGRLAM+GFVAA+AVE KG++V
Sbjct: 77 PMK-------------PKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKGENV 136
Query: 138 LEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGRFAMLGLVAL 197
L QI +GG+ WF+GT+ +LTLASL+PLFKG+SVESKSKG+MTSDAELWNGRFAMLGLVAL
Sbjct: 137 LAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGLVAL 195
Query: 198 AFTEFVKGGSLV 202
AFTEFVKGG+LV
Sbjct: 197 AFTEFVKGGTLV 195
BLAST of CmoCh06G013820 vs. ExPASy Swiss-Prot
Match:
Q94K66 (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELIP2 PE=1 SV=1)
HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45
Identity = 112/210 (53.33%), Postives = 145/210 (69.05%), Query Frame = 0
Query: 1 MATSAL-LQAIPARSASRTTLRT--PTNRLCSRRTASFRVRCTAEEE--QREQAIPTPA- 60
MAT++ +Q++ A + T R TN+L +R A VRC A+ + + + ++P+ +
Sbjct: 1 MATASFNMQSVFAAPSGVLTTRNIRNTNQLFFKRIAPVGVRCMAQGDPIKEDPSVPSTST 60
Query: 61 ---PPTSNPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLA 120
PP SPPPP KPK VSTKF D+LAFSGPAPERINGRLA
Sbjct: 61 SATPPQMPQSPPPPVSKPK-----------------VSTKFGDLLAFSGPAPERINGRLA 120
Query: 121 MIGFVAAVAVEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMT 180
M+GFVAA+A+E KG++V QI +GG+ WF+GT+ +LTLAS++PLFKG+ E+KSKG MT
Sbjct: 121 MVGFVAAIAMELSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMT 180
Query: 181 SDAELWNGRFAMLGLVALAFTEFVKGGSLV 202
SDAELWNGRFAMLGLVALAFTE+V GG+LV
Sbjct: 181 SDAELWNGRFAMLGLVALAFTEYVTGGTLV 193
BLAST of CmoCh06G013820 vs. ExPASy Swiss-Prot
Match:
P11432 (Early light-induced protein, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 1.9e-43
Identity = 113/210 (53.81%), Postives = 140/210 (66.67%), Query Frame = 0
Query: 1 MATSALLQAIPARSASRTTLRTPTNRLCS---------RRTASFRVRCTAEEEQREQAIP 60
MA S+ Q+I + S + + R+ N+ + RR S +VR AE E +EQ+
Sbjct: 1 MAVSS-CQSIMSNSMTNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKV 60
Query: 61 TPAPPTSNPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLA 120
P T P+ P+P+P P +STKFSD++AFSGPAPERINGRLA
Sbjct: 61 AVDPTT--PTASTPTPQPAYTRP-----------PKMSTKFSDLMAFSGPAPERINGRLA 120
Query: 121 MIGFVAAVAVEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMT 180
MIGFVAA+ VE KGQ + EQ+ GG+ WF+GTSV+L+LASLIP F+GVSVESKSK +M+
Sbjct: 121 MIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMS 180
Query: 181 SDAELWNGRFAMLGLVALAFTEFVKGGSLV 202
SDAE WNGR AMLGLVALAFTEFVKG SLV
Sbjct: 181 SDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
BLAST of CmoCh06G013820 vs. ExPASy Swiss-Prot
Match:
Q01931 (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum OX=4153 GN=DSP-22 PE=2 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 4.0e-33
Identity = 96/213 (45.07%), Postives = 120/213 (56.34%), Query Frame = 0
Query: 1 MATSALLQAIPA---RSASRTTLRTPTNRLCS---------RRTASFRVRCTAEEEQREQ 60
MA+S IPA R S T P N RR A F VR E+ ++E+
Sbjct: 1 MASSTCYATIPAMSCRGQSTITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEE 60
Query: 61 AIPTPAPPTSNPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERING 120
T + P T +T RTV D+ +F G APERING
Sbjct: 61 QQQQKQQQTHDGGP-----------DLTPNRTEVTTKRTV-----DLFSFDGLAPERING 120
Query: 121 RLAMIGFVAAVAVEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKG 180
R AMIGFVAAV VE G+DV Q+ NGG+ WF+ TS VL LA+LIP+++G+S E+K+ G
Sbjct: 121 RSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNG 180
Query: 181 LMTSDAELWNGRFAMLGLVALAFTEFVKGGSLV 202
SDAE+WNGRFAM+GLVALAFTE+VKGG L+
Sbjct: 181 FWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197
BLAST of CmoCh06G013820 vs. ExPASy Swiss-Prot
Match:
P14895 (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare OX=4513 PE=2 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31
Identity = 82/165 (49.70%), Postives = 110/165 (66.67%), Query Frame = 0
Query: 40 TAEEEQREQAIPTPAPPTS-NPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAF 99
+A+E P+P+ TS +P+ P +PKP + + D LAF
Sbjct: 79 SAKETTSASTSPSPSQYTSPSPTTIPAAPKP--------------VTKKANPSVWDALAF 138
Query: 100 SGPAPERINGRLAMIGFVAAVAVEAWKGQDVLEQIG--NGGIPWFVGTSVVLTLASLIPL 159
SGPAPERINGRLAM+GFVAA++VEA +G +L+Q+G + G+ WF+ T+ V ++ASL+PL
Sbjct: 139 SGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPL 198
Query: 160 FKGVSVESKSKGLMTSDAELWNGRFAMLGLVALAFTEFVKGGSLV 202
+G SVESKS G+ ++DAELWNGRFAMLGLVALA TEF+ G V
Sbjct: 199 LQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229
BLAST of CmoCh06G013820 vs. ExPASy TrEMBL
Match:
A0A6J1FFS2 (early light-induced protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445323 PE=4 SV=1)
HSP 1 Score: 335.5 bits (859), Expect = 1.5e-88
Identity = 184/201 (91.54%), Postives = 184/201 (91.54%), Query Frame = 0
Query: 1 MATSALLQAIPARSASRTTLRTPTNRLCSRRTASFRVRCTAEEEQREQAIPTPAPPTSNP 60
MATSALLQAIPARSASRTTLRTPTNRLCSRRTASFRVRCTAEEEQREQAIPTPAPPTSNP
Sbjct: 1 MATSALLQAIPARSASRTTLRTPTNRLCSRRTASFRVRCTAEEEQREQAIPTPAPPTSNP 60
Query: 61 SPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLAMIGFVAAVA 120
SPPPPSPKPK VSTKFSDVLAFSGPAPERINGRLAMIGFVAAVA
Sbjct: 61 SPPPPSPKPK-----------------VSTKFSDVLAFSGPAPERINGRLAMIGFVAAVA 120
Query: 121 VEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGR 180
VEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGR
Sbjct: 121 VEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGR 180
Query: 181 FAMLGLVALAFTEFVKGGSLV 202
FAMLGLVALAFTEFVKGGSLV
Sbjct: 181 FAMLGLVALAFTEFVKGGSLV 184
BLAST of CmoCh06G013820 vs. ExPASy TrEMBL
Match:
A0A6J1IB88 (early light-induced protein 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473077 PE=4 SV=1)
HSP 1 Score: 330.1 bits (845), Expect = 6.4e-87
Identity = 181/201 (90.05%), Postives = 181/201 (90.05%), Query Frame = 0
Query: 1 MATSALLQAIPARSASRTTLRTPTNRLCSRRTASFRVRCTAEEEQREQAIPTPAPPTSNP 60
MATSALLQAIP SASRTT RTPTNRLCSRRTASFRVRCTAEEEQREQAIPTPAPPTSNP
Sbjct: 1 MATSALLQAIPVSSASRTTFRTPTNRLCSRRTASFRVRCTAEEEQREQAIPTPAPPTSNP 60
Query: 61 SPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLAMIGFVAAVA 120
SPPPPSPKPK VSTKFSDVLAFSGPAPERINGRLAMIGFVAAVA
Sbjct: 61 SPPPPSPKPK-----------------VSTKFSDVLAFSGPAPERINGRLAMIGFVAAVA 120
Query: 121 VEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGR 180
VEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGR
Sbjct: 121 VEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGR 180
Query: 181 FAMLGLVALAFTEFVKGGSLV 202
FAMLGLVALAFTEFVKGGSLV
Sbjct: 181 FAMLGLVALAFTEFVKGGSLV 184
BLAST of CmoCh06G013820 vs. ExPASy TrEMBL
Match:
A0A5D3D3B2 (Early light-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00800 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 3.8e-63
Identity = 144/208 (69.23%), Postives = 160/208 (76.92%), Query Frame = 0
Query: 1 MATSALLQAIPARSASRTTLRTPTN-------RLCSRRTASFRVRCTAEEEQREQAIPTP 60
MA SA++Q+IP+ +ASR RT TN RLCSR T +FRVRCTAEE+QREQAIP+
Sbjct: 1 MAASAVMQSIPSSTASRGVYRTTTNRLLPAAVRLCSRNTGAFRVRCTAEEDQREQAIPSS 60
Query: 61 APPTSNPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLAMI 120
P PSPP P P ST + STKF+D+LAFSGP PERINGRLAMI
Sbjct: 61 IP----PSPPKLEPAP------------SSTSKVTSTKFTDILAFSGPGPERINGRLAMI 120
Query: 121 GFVAAVAVEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSD 180
GFVAA+AVE KGQDV EQI NGGIPWFVGTSVVLTLASLIPLFKGVS ES SKG+M+S+
Sbjct: 121 GFVAALAVEVSKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSN 180
Query: 181 AELWNGRFAMLGLVALAFTEFVKGGSLV 202
AELWNGRFAMLGLVALAFTE+VKGGSLV
Sbjct: 181 AELWNGRFAMLGLVALAFTEYVKGGSLV 192
BLAST of CmoCh06G013820 vs. ExPASy TrEMBL
Match:
A0A1S3AXH6 (early light-induced protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483676 PE=4 SV=1)
HSP 1 Score: 249.6 bits (636), Expect = 1.1e-62
Identity = 143/208 (68.75%), Postives = 159/208 (76.44%), Query Frame = 0
Query: 1 MATSALLQAIPARSASRTTLRTPTN-------RLCSRRTASFRVRCTAEEEQREQAIPTP 60
MA SA++Q+IP+ +ASR RT TN RLCSR T +FRVRCT EE+QREQAIP+
Sbjct: 1 MAASAVMQSIPSSTASRGVYRTTTNRLLPAAVRLCSRNTGAFRVRCTGEEDQREQAIPSS 60
Query: 61 APPTSNPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLAMI 120
P PSPP P P ST + STKF+D+LAFSGP PERINGRLAMI
Sbjct: 61 IP----PSPPKLEPAP------------SSTSKVTSTKFTDILAFSGPGPERINGRLAMI 120
Query: 121 GFVAAVAVEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSD 180
GFVAA+AVE KGQDV EQI NGGIPWFVGTSVVLTLASLIPLFKGVS ES SKG+M+S+
Sbjct: 121 GFVAALAVEVSKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSN 180
Query: 181 AELWNGRFAMLGLVALAFTEFVKGGSLV 202
AELWNGRFAMLGLVALAFTE+VKGGSLV
Sbjct: 181 AELWNGRFAMLGLVALAFTEYVKGGSLV 192
BLAST of CmoCh06G013820 vs. ExPASy TrEMBL
Match:
A0A0A0LA49 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145780 PE=4 SV=1)
HSP 1 Score: 244.2 bits (622), Expect = 4.7e-61
Identity = 141/211 (66.82%), Postives = 159/211 (75.36%), Query Frame = 0
Query: 1 MATSALLQAIPARSASRTTLRTPTNRL-------CSRRTASFRVRCTAEEEQREQAIPT- 60
MA SA++Q+I + +A+R RT TNRL CSR TA+FRVRC AEE+QREQAIP+
Sbjct: 1 MAASAVMQSILSTTATRGVYRTTTNRLLPAALRPCSRSTAAFRVRCMAEEDQREQAIPSS 60
Query: 61 --PAPPTSNPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRL 120
P+PP PSP PPS + STK +D+LAFSGP PERINGRL
Sbjct: 61 IPPSPPKPEPSPSPPS-------------------KVTSTKLTDILAFSGPGPERINGRL 120
Query: 121 AMIGFVAAVAVEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLM 180
AMIGFVAA+AVE KGQDV EQI NGGIPWFVGTSVVLTLASLIPLFKGVS ES SKG+M
Sbjct: 121 AMIGFVAALAVEVSKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIM 180
Query: 181 TSDAELWNGRFAMLGLVALAFTEFVKGGSLV 202
+S+AELWNGRFAMLGLVALAFTE+VKGGSLV
Sbjct: 181 SSNAELWNGRFAMLGLVALAFTEYVKGGSLV 192
BLAST of CmoCh06G013820 vs. TAIR 10
Match:
AT3G22840.1 (Chlorophyll A-B binding family protein )
HSP 1 Score: 196.1 bits (497), Expect = 2.8e-50
Identity = 115/192 (59.90%), Postives = 136/192 (70.83%), Query Frame = 0
Query: 18 TTLRTPTNRLCS-------RRTASFRVRCTAE-EEQREQAIPTPAPPTSNPSPPPPSPKP 77
TT + TN+L S +R VRC AE E + P P+ + P P PSP P
Sbjct: 17 TTRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGGPTNEDSSPAPSTSAAQPLPKSPSPPP 76
Query: 78 KVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLAMIGFVAAVAVEAWKGQDV 137
+ VSTKFSD+LAFSGPAPERINGRLAM+GFVAA+AVE KG++V
Sbjct: 77 PMK-------------PKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKGENV 136
Query: 138 LEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGRFAMLGLVAL 197
L QI +GG+ WF+GT+ +LTLASL+PLFKG+SVESKSKG+MTSDAELWNGRFAMLGLVAL
Sbjct: 137 LAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGLVAL 195
Query: 198 AFTEFVKGGSLV 202
AFTEFVKGG+LV
Sbjct: 197 AFTEFVKGGTLV 195
BLAST of CmoCh06G013820 vs. TAIR 10
Match:
AT4G14690.1 (Chlorophyll A-B binding family protein )
HSP 1 Score: 184.5 bits (467), Expect = 8.4e-47
Identity = 112/210 (53.33%), Postives = 145/210 (69.05%), Query Frame = 0
Query: 1 MATSAL-LQAIPARSASRTTLRT--PTNRLCSRRTASFRVRCTAEEE--QREQAIPTPA- 60
MAT++ +Q++ A + T R TN+L +R A VRC A+ + + + ++P+ +
Sbjct: 1 MATASFNMQSVFAAPSGVLTTRNIRNTNQLFFKRIAPVGVRCMAQGDPIKEDPSVPSTST 60
Query: 61 ---PPTSNPSPPPPSPKPKVNNPFTSTSRSQSTDRTVSTKFSDVLAFSGPAPERINGRLA 120
PP SPPPP KPK VSTKF D+LAFSGPAPERINGRLA
Sbjct: 61 SATPPQMPQSPPPPVSKPK-----------------VSTKFGDLLAFSGPAPERINGRLA 120
Query: 121 MIGFVAAVAVEAWKGQDVLEQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMT 180
M+GFVAA+A+E KG++V QI +GG+ WF+GT+ +LTLAS++PLFKG+ E+KSKG MT
Sbjct: 121 MVGFVAAIAMELSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMT 180
Query: 181 SDAELWNGRFAMLGLVALAFTEFVKGGSLV 202
SDAELWNGRFAMLGLVALAFTE+V GG+LV
Sbjct: 181 SDAELWNGRFAMLGLVALAFTEYVTGGTLV 193
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P93735 | 3.9e-49 | 59.90 | Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
Q94K66 | 1.2e-45 | 53.33 | Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
P11432 | 1.9e-43 | 53.81 | Early light-induced protein, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1 | [more] |
Q01931 | 4.0e-33 | 45.07 | Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum O... | [more] |
P14895 | 1.7e-31 | 49.70 | High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FFS2 | 1.5e-88 | 91.54 | early light-induced protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1IB88 | 6.4e-87 | 90.05 | early light-induced protein 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A5D3D3B2 | 3.8e-63 | 69.23 | Early light-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A1S3AXH6 | 1.1e-62 | 68.75 | early light-induced protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10348... | [more] |
A0A0A0LA49 | 4.7e-61 | 66.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145780 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G22840.1 | 2.8e-50 | 59.90 | Chlorophyll A-B binding family protein | [more] |
AT4G14690.1 | 8.4e-47 | 53.33 | Chlorophyll A-B binding family protein | [more] |