CmoCh06G013300 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G013300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Myb-related transcription factor
Location	Cmo_Chr06: 9908122 .. 9911952 (-)
RNA-Seq Expression	CmoCh06G013300
Synteny	CmoCh06G013300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACAATGGTGAGAGCTCCTTGCTGCCAGAAAACAGGACTGAAAAAGGGGCCATGGGCAGCTGAAGAAGATCAAATTTTGATCTCTTTCATCCAAAAACACGGCCATGCCAACTGGCGCGCCCTTCCAAAGCTTGCCGGTAAGTTCTTCGAGAGTTTCGATCATCAAATGGTTGGTTTTTGTGAGATCCTACGTCGGTTGGAGAGAAAAACGAAACATTTTTTATAAGAATGTGGAAACCTCTCTGTAGTAGACTTGGTAGCGGTGAGTTGGGCGGTTACAAATGGTATTAGAGTCAAGGACGATGTGCCAGGGCTTTCAACCTCCAAAAGATTGAATTGTGAGTGGATTATGAGATTCTACCTCGATTGGAGAGGAGAACGAAGCAGATGTAGAATCCTCTCCTAAACGCGTTTTAAAAATCTTGAGGGGAAACCCAAAAGAAAAGTCCAAATAGGATAATATCCGCTAGGCGTGGGTTTGAGGGGAAGCTCGAAATGGAAAGAACTGTTATTGTTGAAAATCTTGAAGGGAAACCCAAAAGTAAAGTCCAAATAAGATAATATTTGTTAGATGTGGGCTTGAGATGAAGCTCAACGGGCAGTCACAGTTTCTTTGTTTTGATCTCTGGGTATTTTCTCGGTCTAGACTTGAGGGGAAGCTCGAAATGGAAAAGGCGGTTACAATTTCTTTTGTTTTGATCTCGGGGCATTTCTGGGTCTAAAGACAACAATAGAACAATATTTGCTAGCAGGCTATAGTTCAAAATGAAGCTAGTTGTGAATTTGGGCTGTTACAGTTTTTTTTTTTTTTTTGATCTCTGTGTATTTCTTCGATTTTGTTAGGACTTTTACGATGTGGGAAGAGTTGCAGACTTCGATGGATAAACTACTTGAGGCCCGATATTAAGAGAGGAAATTTCACTCAAGAGGAACAGAACACAATTCTTTACCTCCATGAAAAGCTCGGGAATAGGTACATCAACTAAAAAACGTCATTAAAATTATCAGCACAGAATGATTTTGAGATGATTTTAATGGTTGATACATTCAGGTGGTCAGCCATCGCGGCGCAGCTACCGGGACGAACAGATAACGAAATCAAGAACTTCTGGCACACCCACTTGAAAAAACGAGCGATGAAGAAACAGAGCAACGATTCCGCCATTGTTGAACCCAAATCGAAACCACCCCAGAAGCTGAATTCCTCTAACCAATACGAATTTCCATGTTCTTCCCTCGATCATTCATCGGTGACAGATTCTCCAGCCGCCGTGTGGGGCGGCTGCAACGAAATCGAGAAGGAACAACGCATTGAAATCTTTGAGGCATTTCATCAAACAGGTGGCGGGCATGGGGCAGAGGAGGCGTCGACTCGGCCAATGTTCAAGTCGTCGGCGTTCAATGATGAAGAACAGGTTCAGTCGCTGTTCAGAGCCATGGATTCAATGGAATTTGGGTGTTATTACGACAATGGCTCTAGCATGAACGATGGTATGGAGTTTTGGTTCAGCGTGTTCGTTAAAGCTGGTGGGTCGCTAAATGACCCTGCATTTTAATTTTACAGAACCGCCGCAGTCCAAAAATGGCGTGAACTGTAAATTAGATAAGGACTTAAGGGTATATTAGGAAATGAAAATATGTCTTTTGCCAACTATTGCGCATTAGTCTACGGTCAATGACTCGTAATAGGATAATTTGAGGGTTTTTTTAATTAAAAATTATTAAAAAAATGCCAGACAATTATTTGTCACCGTGACGTCATGCTTCCGTCACTAATTCCTAATACGATTATGTAATAAATAAATAAATAAATTTATGCTTTTTAATTTTTTCTGTTATATTCTAAAATTTAGATAATAAAAATGAGAAAGGCATAAATAATAGATTTTATTTATTTGGAGAAAAAAAAAACAAAAGTATTACCGTTGGACCTAAATTTAAAAATATTTGAAAGGTTATTTAAAATAATTGTGAGAAAGTTTATATATCGTCTTCCATTGTTTTGTATCAAAATATTTAAATGGGTCTAAAGCAAAAACAATTCATTGAAAATGACTTCGATAATGTCTTTATTCGAACCGCATTTGCTCGTGTAGAAATATTTTTTTTTCACGTCTATATCACTTTCCACCCTATTTCCAAATCCAAAAGTTCACACGTTTTCCATGACAACTAATTAAGAGGATAATCCCGAGTGATATGAGGCGAATGTACAGTGACATCATAATAAAACGAAGTATTTGTAATTTCGTTGTAGGTTGTCTTTCGAATTTCCGTGCTATTGACCAATGTCGTTTTAATTTAAATTTTTTTTATTGAAAAAGTATGGAATTATTAATAAATGAAATAGAGAAATTGAAGCCTCGTAAGAAAATAGATTAATCAAGTTATGATGATGTCGGTGGACCATCGAATTTCCACGAGCATAATTTTTAAAAAAATATATAAATAAAATAAATTTCTAAAGCTTGGAGACTTGAACTGTTGACCAAAGTCAATTCATTCCAAATTCATATTTCCTAAGAAATTGCCATGAAATTTGTTTAGTTATCTGATGAAATAAATTTTATAACATATTTATTTTCAATTTAATTTATAACATCAATATTCTCTTAGTTTTAATAAAAAAAAAATATAATAAATATTTTATTTTATATTTAGAATTGGGCTAAAATTCAAATATATTACTTAGGCGAAAATCATATCAATTTCCAAAAATAATATAAAATATTAATTTAATATTTAAAAAAAATTATTTAAAGCCAAATAAAGTTGAAAAGTTTATAGCTTTTAGAATAATTTTTATACAAATATATTTTAAAAATTTTGGACTATAATATAAACTAAATTAAATGTTTAATAAATTTCAAATTTATGGCTAGAAAAATAGGATAAAATATATAATTTTAAATGTTGTGAAAATAACAATAAAATTATTATAGTTTAATTAGATTTTAATTTTACGAAACAAAAAAATTAAAATTTAATTGTAATGACATATAAAAATGACAAAATGCAACAATATTTATTATTATAATTTAATATTAAAGAAAAAAAAAATTAATTTGAATTGGTTCGGTTTTTAATTAAAGAACGGAGAATATCAAACCGAACCGCTAAGCTACCTAGTACCTACATATACCGATGTGTATTTACCCAGGCCCATCTCTTTTTCTTCCAGCCCAGCCCAGACCAGCCCAGCCCAATCCATCCCTCTGTTCATCCGGCCGCCCAGCCCAGCCCAGCTCCATTTTTTTAAATAATAAATAAAAAAAAATAAAAAGGAAAAAGGTAATCAATATCAACGTATTTCCTTCTTACATCTATTTTATAGTCTCTCTCCCGCCAACCGCCAGGCTTCCCTCCGTTGTCGTTACCGACCCGGTTACTTCCCCCGTCGGGCTCTGTTCCGCTTTCAGTCCCTCCCGCTCGTTCTTCCTGCTTTGTCGCCGTCGGCACCCGTTCGTTCTTCTCCATCTTTCAATTTCAGGTACTTTTTTCGATTCTAATATCAGTGACGTCTGCAAACTTGTTGAACGATTATGTTTCAAATCGAGGTCGATCAGTTTCGTTGCGTATTGATTTTAGAGGATTGTCGATAATGGACTGTTTAGGTTAATCCTTCATAGTTGGTTTGATTGTCATAATCAAATAAGCTTCTAAGGTTAGTTTATACTATTAAATCGGATTGTTAGCCATAGTCAAATTCAAGAAGCTTTTAATGGTATTAATTCTCTTGGAAGATTAAGTTTCTGTGCATTGTTTAATTAAATCTGTTTCCACGGCTATATCACTGATCTTCTGTCTTCTTTGGTTAGGGTTCACAATAA

mRNA sequence

GAACAATGGTGAGAGCTCCTTGCTGCCAGAAAACAGGACTGAAAAAGGGGCCATGGGCAGCTGAAGAAGATCAAATTTTGATCTCTTTCATCCAAAAACACGGCCATGCCAACTGGCGCGCCCTTCCAAAGCTTGCCGGACTTTTACGATGTGGGAAGAGTTGCAGACTTCGATGGATAAACTACTTGAGGCCCGATATTAAGAGAGGAAATTTCACTCAAGAGGAACAGAACACAATTCTTTACCTCCATGAAAAGCTCGGGAATAGGTGGTCAGCCATCGCGGCGCAGCTACCGGGACGAACAGATAACGAAATCAAGAACTTCTGGCACACCCACTTGAAAAAACGAGCGATGAAGAAACAGAGCAACGATTCCGCCATTGTTGAACCCAAATCGAAACCACCCCAGAAGCTGAATTCCTCTAACCAATACGAATTTCCATGTTCTTCCCTCGATCATTCATCGGTGACAGATTCTCCAGCCGCCGTGTGGGGCGGCTGCAACGAAATCGAGAAGGAACAACGCATTGAAATCTTTGAGGCATTTCATCAAACAGGTGGCGGGCATGGGGCAGAGGAGGCGTCGACTCGGCCAATGTTCAAGTCGTCGGCGTTCAATGATGAAGAACAGGTTCAGTCGCTGTTCAGAGCCATGGATTCAATGGAATTTGGGTGTTATTACGACAATGGCTCTAGCATGAACGATGAACCGCCGCAGTCCAAAAATGGCGTGAACTGTAAATTAGATAAGGACTTAAGGTCTCTCTCCCGCCAACCGCCAGGCTTCCCTCCGTTGTCGTTACCGACCCGGTTACTTCCCCCGTCGGGCTCTGTTCCGCTTTCAGTCCCTCCCGCTCGTTCTTCCTGCTTTGTCGCCGTCGGCACCCGTTCGTTCTTCTCCATCTTTCAATTTCAGGGTTCACAATAA

Coding sequence (CDS)

ATGGTGAGAGCTCCTTGCTGCCAGAAAACAGGACTGAAAAAGGGGCCATGGGCAGCTGAAGAAGATCAAATTTTGATCTCTTTCATCCAAAAACACGGCCATGCCAACTGGCGCGCCCTTCCAAAGCTTGCCGGACTTTTACGATGTGGGAAGAGTTGCAGACTTCGATGGATAAACTACTTGAGGCCCGATATTAAGAGAGGAAATTTCACTCAAGAGGAACAGAACACAATTCTTTACCTCCATGAAAAGCTCGGGAATAGGTGGTCAGCCATCGCGGCGCAGCTACCGGGACGAACAGATAACGAAATCAAGAACTTCTGGCACACCCACTTGAAAAAACGAGCGATGAAGAAACAGAGCAACGATTCCGCCATTGTTGAACCCAAATCGAAACCACCCCAGAAGCTGAATTCCTCTAACCAATACGAATTTCCATGTTCTTCCCTCGATCATTCATCGGTGACAGATTCTCCAGCCGCCGTGTGGGGCGGCTGCAACGAAATCGAGAAGGAACAACGCATTGAAATCTTTGAGGCATTTCATCAAACAGGTGGCGGGCATGGGGCAGAGGAGGCGTCGACTCGGCCAATGTTCAAGTCGTCGGCGTTCAATGATGAAGAACAGGTTCAGTCGCTGTTCAGAGCCATGGATTCAATGGAATTTGGGTGTTATTACGACAATGGCTCTAGCATGAACGATGAACCGCCGCAGTCCAAAAATGGCGTGAACTGTAAATTAGATAAGGACTTAAGGTCTCTCTCCCGCCAACCGCCAGGCTTCCCTCCGTTGTCGTTACCGACCCGGTTACTTCCCCCGTCGGGCTCTGTTCCGCTTTCAGTCCCTCCCGCTCGTTCTTCCTGCTTTGTCGCCGTCGGCACCCGTTCGTTCTTCTCCATCTTTCAATTTCAGGGTTCACAATAA

Protein sequence

MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRIEIFEAFHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSSMNDEPPQSKNGVNCKLDKDLRSLSRQPPGFPPLSLPTRLLPPSGSVPLSVPPARSSCFVAVGTRSFFSIFQFQGSQ

Homology

[Close]

BLAST of CmoCh06G013300 vs. ExPASy Swiss-Prot
Match: Q6K1S6 (Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.0e-56
Identity = 97/136 (71.32%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M RAPCC+K GLK+GPW AEED+IL++ I++HGH+NWRALP+ AGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKMGLKRGPWTAEEDRILVAHIERHGHSNWRALPRQAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120
           LRPDIKRGNFT+EE++ I++LH+ LGNRWSAIAA+LPGRTDNEIKN WHTHLKKR   K 
Sbjct: 61  LRPDIKRGNFTREEEDAIIHLHDLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEPKP 120

Query: 121 SNDSAIVEPKSKPPQK 137
           S+      PK K  +K
Sbjct: 121 SSGREAAAPKRKATKK 136

[Close]

BLAST of CmoCh06G013300 vs. ExPASy Swiss-Prot
Match: Q7XBH4 (Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 SV=2)

HSP 1 Score: 217.2 bits (552), Expect = 2.5e-55
Identity = 93/115 (80.87%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M RAPCC+K GLKKGPW  EED++L++ IQ+HGH NWRALPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKR 116
           LRPDIKRGNF++EE++TI++LHE LGNRWSAIAA+LPGRTDNEIKN WHTHLKKR
Sbjct: 61  LRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKR 115

[Close]

BLAST of CmoCh06G013300 vs. ExPASy Swiss-Prot
Match: Q9LTC4 (Transcription factor MYB15 OS=Arabidopsis thaliana OX=3702 GN=MYB15 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-54
Identity = 106/164 (64.63%), Postives = 123/164 (75.00%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M RAPCC+K GLK+GPW  EEDQIL+SFI  HGH+NWRALPK AGLLRCGKSCRLRW+NY
Sbjct: 1   MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKR----- 120
           L+PDIKRGNFT+EE++ I+ LH+ LGNRWSAIAA+LPGRTDNEIKN WHTHLKKR     
Sbjct: 61  LKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLEDYQ 120

Query: 121 -AMKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDS 159
            A  K SN     +PKS+    + SSN      S+   S + DS
Sbjct: 121 PAKPKTSNKKKGTKPKSE--SVITSSN------STRSESELADS 156

[Close]

BLAST of CmoCh06G013300 vs. ExPASy Swiss-Prot
Match: Q9LNC9 (Transcription factor MYB13 OS=Arabidopsis thaliana OX=3702 GN=MYB13 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.1e-54
Identity = 100/147 (68.03%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M R PCC+K GLKKGPW+AEED+ILI++I  HGH NWRALPKLAGLLRCGKSCRLRWINY
Sbjct: 1   MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120
           LRPDIKRGNFT  E++TI+ LH+ LGNRWSAIAA+LPGRTDNEIKN WHTHLKKR    Q
Sbjct: 61  LRPDIKRGNFTPHEEDTIISLHQLLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLHHSQ 120

Query: 121 SND-------SAIVEPKSKPPQKLNSS 141
             +       +   E  + P Q+ +SS
Sbjct: 121 DQNNKEDFVSTTAAEMPTSPQQQSSSS 147

[Close]

BLAST of CmoCh06G013300 vs. ExPASy Swiss-Prot
Match: Q9SJX8 (Transcription factor MYB14 OS=Arabidopsis thaliana OX=3702 GN=MYB14 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.8e-54
Identity = 94/122 (77.05%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M RAPCC+K G+K+GPW  EEDQILI++I  +GH+NWRALPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKMGVKRGPWTPEEDQILINYIHLYGHSNWRALPKHAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120
           LRPDIKRGNFT +E+ TI+ LHE LGNRWSAIAA+LPGRTDNEIKN WHTHLKKR  K  
Sbjct: 61  LRPDIKRGNFTPQEEQTIINLHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLSKNL 120

Query: 121 SN 123
           +N
Sbjct: 121 NN 122

[Close]

BLAST of CmoCh06G013300 vs. ExPASy TrEMBL
Match: A0A6J1G239 (transcription factor MYB30-like OS=Cucurbita moschata OX=3662 GN=LOC111449971 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.8e-136
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY
Sbjct: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120
           LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ
Sbjct: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120

Query: 121 SNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRIEIFEA 180
           SNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRIEIFEA
Sbjct: 121 SNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRIEIFEA 180

Query: 181 FHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSSMND 235
           FHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSSMND
Sbjct: 181 FHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSSMND 234

[Close]

BLAST of CmoCh06G013300 vs. ExPASy TrEMBL
Match: A0A0S2I8B4 (Myb-related transcription factor OS=Citrullus lanatus OX=3654 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 4.1e-101
Identity = 184/243 (75.72%), Postives = 200/243 (82.30%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           MVRAPCC+K GLKKGPW  EED+ILIS+I KHGH+NWRALPKLAGLLRCGKSCRLRWINY
Sbjct: 1   MVRAPCCEKLGLKKGPWTTEEDEILISYINKHGHSNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120
           LRPDIKRGNFT EEQNT+LYLHEKLGNRWSAIAA+LPGRTDNEIKNFWHTHLKKR + KQ
Sbjct: 61  LRPDIKRGNFTLEEQNTVLYLHEKLGNRWSAIAAKLPGRTDNEIKNFWHTHLKKRVVNKQ 120

Query: 121 SN-----DSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRI 180
           S+      SAIVEPK K PQ+L+ SN YEFP  SLD S  TDSP  VW G NEIEKEQ +
Sbjct: 121 SHVYEKKKSAIVEPKFK-PQELDFSNHYEFPSYSLDPSPFTDSPTGVWDGYNEIEKEQHV 180

Query: 181 EIFEAFHQTGGGHGAEEASTR----PMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSS 235
           EIFEAFHQT GGH  EE ST     P+F SSA NDEEQ+Q  FR MDS+EFGCYY+NG  
Sbjct: 181 EIFEAFHQTCGGHWPEEPSTANFNGPVFNSSAVNDEEQIQPAFRDMDSVEFGCYYNNGDK 240

[Close]

BLAST of CmoCh06G013300 vs. ExPASy TrEMBL
Match: A0A6J1IAK6 (transcription factor MYB14-like OS=Cucurbita maxima OX=3661 GN=LOC111473219 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.6e-100
Identity = 183/189 (96.83%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 46  LLRCGKSCRLRWINYLRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIK 105
           LLRCGKSCRLRWINYLRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIK
Sbjct: 3   LLRCGKSCRLRWINYLRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIK 62

Query: 106 NFWHTHLKKRAMKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGG 165
           NFWHTHLKKRAMKKQSNDSAIVEPKSKPPQKLNSSNQYEFP SSLDHSSVTDSPAAVWGG
Sbjct: 63  NFWHTHLKKRAMKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGG 122

Query: 166 CNEIEKEQRIEIFEAFHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCY 225
           CNEIEKEQRIEIFEAFHQT GG  AEEAST PMFKSSAFNDEEQVQSLFRAMDSMEFGCY
Sbjct: 123 CNEIEKEQRIEIFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCY 182

Query: 226 YDNGSSMND 235
           YDN SSMND
Sbjct: 183 YDNSSSMND 191

[Close]

BLAST of CmoCh06G013300 vs. ExPASy TrEMBL
Match: A0A6J1DF45 (transcription factor MYB30-like OS=Momordica charantia OX=3673 GN=LOC111019490 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.2e-92
Identity = 173/243 (71.19%), Postives = 194/243 (79.84%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           MVRAPCC+K GLKKGPW AEEDQILIS+I +HGH+NWRALPKLAGLLRCGKSCRLRWINY
Sbjct: 1   MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120
           LRPDIKRGNFTQEEQ  +L LHEKLGNRWSAIAA LPGRTDNEIKNFWHTHLKKR + KQ
Sbjct: 61  LRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRTDNEIKNFWHTHLKKRLVNKQ 120

Query: 121 S-------NDSAIVEPKSKPPQKLNSS--NQYEFPCSSLDHSSVTDSPAAVWGGCNEIEK 180
           S       +DSA++  K K PQKL+ S    +E P SSLD SS+TDSP A W G NEI  
Sbjct: 121 SHVSERKKSDSAVITGKPK-PQKLDCSTYTYHELPSSSLDLSSLTDSPTAAWDGYNEIGN 180

Query: 181 EQRIEIFEAFHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSS 235
           +Q IE+ EAFHQTGGG   EE    P+F SSA NDE+Q+QS FR +DSMEFGCYY+N + 
Sbjct: 181 KQYIEVSEAFHQTGGGLWPEEPFDGPIFNSSAANDEKQLQSPFRDVDSMEFGCYYNNDTK 240

[Close]

BLAST of CmoCh06G013300 vs. ExPASy TrEMBL
Match: A0A1S3AW89 (myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103483593 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.1e-89
Identity = 175/251 (69.72%), Postives = 192/251 (76.49%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           MVRAPCC+K GLKKGPW AEED+ILIS+I KHGH+NWRALPKLAGLLRCGKSCRLRWINY
Sbjct: 1   MVRAPCCEKLGLKKGPWTAEEDEILISYINKHGHSNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRA---- 120
           LRPDIKRGNFT EEQ  +L+LHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKR     
Sbjct: 61  LRPDIKRGNFTLEEQEIVLHLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRVSNKQ 120

Query: 121 -----MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEK 180
                 KK+S DSA+ EPKSK PQKL+ SN YE P  SLDHS  TDSP     G   IE 
Sbjct: 121 TGHVHAKKKSADSAVFEPKSK-PQKLDCSNHYEIPSFSLDHSPFTDSPT----GYKVIEN 180

Query: 181 EQRIEIFEAFHQT-GGGHGAE------EASTRPMFKSSAFND-EEQVQSLFRAMDSMEFG 235
           EQ +EIFEAFHQT  GGH  E      E     +F SSA ND EEQ+Q  +RAMDS+EFG
Sbjct: 181 EQDVEIFEAFHQTCTGGHWPEDHQPLTENFHGSLFNSSAINDNEEQIQPPYRAMDSVEFG 240

[Close]

BLAST of CmoCh06G013300 vs. TAIR 10
Match: AT3G23250.1 (myb domain protein 15 )

HSP 1 Score: 214.9 bits (546), Expect = 8.9e-56
Identity = 106/164 (64.63%), Postives = 123/164 (75.00%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M RAPCC+K GLK+GPW  EEDQIL+SFI  HGH+NWRALPK AGLLRCGKSCRLRW+NY
Sbjct: 1   MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKR----- 120
           L+PDIKRGNFT+EE++ I+ LH+ LGNRWSAIAA+LPGRTDNEIKN WHTHLKKR     
Sbjct: 61  LKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLEDYQ 120

Query: 121 -AMKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDS 159
            A  K SN     +PKS+    + SSN      S+   S + DS
Sbjct: 121 PAKPKTSNKKKGTKPKSE--SVITSSN------STRSESELADS 156

[Close]

BLAST of CmoCh06G013300 vs. TAIR 10
Match: AT1G06180.1 (myb domain protein 13 )

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-55
Identity = 100/147 (68.03%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M R PCC+K GLKKGPW+AEED+ILI++I  HGH NWRALPKLAGLLRCGKSCRLRWINY
Sbjct: 1   MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120
           LRPDIKRGNFT  E++TI+ LH+ LGNRWSAIAA+LPGRTDNEIKN WHTHLKKR    Q
Sbjct: 61  LRPDIKRGNFTPHEEDTIISLHQLLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLHHSQ 120

Query: 121 SND-------SAIVEPKSKPPQKLNSS 141
             +       +   E  + P Q+ +SS
Sbjct: 121 DQNNKEDFVSTTAAEMPTSPQQQSSSS 147

[Close]

BLAST of CmoCh06G013300 vs. TAIR 10
Match: AT2G31180.1 (myb domain protein 14 )

HSP 1 Score: 213.8 bits (543), Expect = 2.0e-55
Identity = 94/122 (77.05%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M RAPCC+K G+K+GPW  EEDQILI++I  +GH+NWRALPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKMGVKRGPWTPEEDQILINYIHLYGHSNWRALPKHAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQ 120
           LRPDIKRGNFT +E+ TI+ LHE LGNRWSAIAA+LPGRTDNEIKN WHTHLKKR  K  
Sbjct: 61  LRPDIKRGNFTPQEEQTIINLHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLSKNL 120

Query: 121 SN 123
           +N
Sbjct: 121 NN 122

[Close]

BLAST of CmoCh06G013300 vs. TAIR 10
Match: AT4G21440.1 (MYB-like 102 )

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-51
Identity = 84/118 (71.19%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MVRAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINY 60
           M R+PCC+K GLKKGPW +EEDQ L+ +IQKHG+ NWR LPK AGL RCGKSCRLRW NY
Sbjct: 1   MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMK 119
           LRPDIKRG F+ EE+ TI+ LH  LGN+WSAIAA+LPGRTDNEIKNFW+TH++K+ ++
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRKKLLR 118

[Close]

BLAST of CmoCh06G013300 vs. TAIR 10
Match: AT1G79180.1 (myb domain protein 63 )

HSP 1 Score: 199.9 bits (507), Expect = 3.0e-51
Identity = 89/129 (68.99%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 3   RAPCCQKTGLKKGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINYLR 62
           RAPCC KT +K+GPW+ EED  LISFIQK GH NWR+LPK +GLLRCGKSCRLRWINYLR
Sbjct: 5   RAPCCDKTKVKRGPWSPEEDIKLISFIQKFGHENWRSLPKQSGLLRCGKSCRLRWINYLR 64

Query: 63  PDIKRGNFTQEEQNTILYLHEKLGNRWSAIAAQLPGRTDNEIKNFWHTHLKKRAMKKQSN 122
           PD+KRGNFT EE+ TI+ LH   GN+WS IA+QLPGRTDNEIKN WHTHLKKR  +    
Sbjct: 65  PDLKRGNFTSEEEETIIKLHHNYGNKWSKIASQLPGRTDNEIKNVWHTHLKKRLAQSSGT 124

Query: 123 DSAIVEPKS 132
                 P S
Sbjct: 125 ADEPASPCS 133

The following BLAST results are available for this feature:

BLAST of CmoCh06G013300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K1S6	3.0e-56	71.32	Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=...	[more]
Q7XBH4	2.5e-55	80.87	Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 ...	[more]
Q9LTC4	1.3e-54	64.63	Transcription factor MYB15 OS=Arabidopsis thaliana OX=3702 GN=MYB15 PE=1 SV=1	[more]
Q9LNC9	2.1e-54	68.03	Transcription factor MYB13 OS=Arabidopsis thaliana OX=3702 GN=MYB13 PE=1 SV=1	[more]
Q9SJX8	2.8e-54	77.05	Transcription factor MYB14 OS=Arabidopsis thaliana OX=3702 GN=MYB14 PE=2 SV=1	[more]

BLAST of CmoCh06G013300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G239	8.8e-136	100.00	transcription factor MYB30-like OS=Cucurbita moschata OX=3662 GN=LOC111449971 PE...	[more]
A0A0S2I8B4	4.1e-101	75.72	Myb-related transcription factor OS=Citrullus lanatus OX=3654 PE=4 SV=1	[more]
A0A6J1IAK6	4.6e-100	96.83	transcription factor MYB14-like OS=Cucurbita maxima OX=3661 GN=LOC111473219 PE=4...	[more]
A0A6J1DF45	1.2e-92	71.19	transcription factor MYB30-like OS=Momordica charantia OX=3673 GN=LOC111019490 P...	[more]
A0A1S3AW89	2.1e-89	69.72	myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103483593 PE=4 SV=1	[more]

BLAST of CmoCh06G013300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23250.1	8.9e-56	64.63	myb domain protein 15	[more]
AT1G06180.1	1.5e-55	68.03	myb domain protein 13	[more]
AT2G31180.1	2.0e-55	77.05	myb domain protein 14	[more]
AT4G21440.1	1.7e-51	71.19	MYB-like 102	[more]
AT1G79180.1	3.0e-51	68.99	myb domain protein 63	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 2.2E-16 score: 70.4 coord: 13..63 e-value: 4.2E-12 score: 56.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 11.253823
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 10.684816
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 1.83401E-10 score: 53.3482
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 69..112 e-value: 8.9683E-13 score: 59.8966
None	No IPR available	GENE3D	1.10.10.60		coord: 68..143 e-value: 5.0E-22 score: 79.7
None	No IPR available	GENE3D	1.10.10.60		coord: 13..66 e-value: 3.2E-18 score: 67.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..143
None	No IPR available	PANTHER	PTHR47999	TRANSCRIPTION FACTOR MYB8-RELATED-RELATED	coord: 3..234
None	No IPR available	PANTHER	PTHR47999:SF14	MYB-RELATED PROTEIN	coord: 3..234
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 67..112 e-value: 2.0E-14 score: 53.5 coord: 14..61 e-value: 7.7E-13 score: 48.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 16.546103
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 25.421408
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G013300.1	CmoCh06G013300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress