CmoCh06G011810 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G011810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	B3 domain-containing protein Os04g0386900-like
Location	Cmo_Chr06: 9018602 .. 9019747 (-)
RNA-Seq Expression	CmoCh06G011810
Synteny	CmoCh06G011810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATCGCAGGAGAAACCTCCGCCAGAGCCTACAGAAATGCAGCCGCAAAATAGTAGAATTTTGCCGCTCTCAGGAAAACCCTACCATGGCGTTATTCTTTCTAAGTCGCATGTCGCTCCCATATGTAATATGGTAAGTTCTCGCTCTCATGGAAATCACTCAGAAATTTTAGAACAGTTATAGTTATAAACGGAATTGGTTTGTGTGCTTGCATTGTCAAAACCACTAGATTTTACGGCCAATCCAGGAAGTATTTGGCTGGTTTGATCAGCAATAGTTTTGGTATCTTTTTGACTTGCAAGATTAGCAGTGTGAAAACTATTAGAAAACCAGTTCATAATAAAAGTTTTGCAAAAATAAGTGTTCGTTTAGTATTTGATTTTCCTTGGAAGAATTAACTGAAAGATTGTCATTAACTTTTAGAATCATTCAATCTCATGATTATTAGGACTTGACATTACCAAATTCTTGGCTACTGCCAGAGGCTCAAATCAGCCTATTTTTCAGCATATATATGACATGAATCAGCTTAATTGTAAGAGACTATCATATCTTCATTTGTAGTTCTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATTATGATCCCTGCGGTTCTTTACTGTGAGGGAAAGAAATGGAAGATCGATTATTATGGGAATCGACGCGGTAAAGCCCTTGACACGAAACAGTGGAGGAAATTTGTTAATGATAATCATCTCAAGTGTGGAGATGCTTGCGTATTTGAGCTAATAGAATGCAGCAGCAGCGTAATCAAGTTCAGAGTTCAAATTCTCAGAGGCGACATCCCTTTTGAGCTGCACGAAAAGTTCAGCGGGGAATCTAGAAACACTCCTATACTCATTGACTAGCTAGCCCCTTCTGTGGTCTCTTAGTGTTCAGTAGTTCGGACTTGTCGACAGCATATATGGTTTGGAATCGGACGACCTGTTTGATAACCGTAAGTGGATATGTATGTTTATCACTAATGCTTATGTCTTAGTCAGGTACATTAGTAGGGAGAAGGAACTGGTTCATTAAGGAGAGATTAGCACTCTCAAATTCGCTGAAGTTGTAATATTACATTGTCGTTCGTGGTATCTTTGTTAGGGTAAAAACCGAAGACGTTTTCGAAATTTCAT

mRNA sequence

ATGCAATCGCAGGAGAAACCTCCGCCAGAGCCTACAGAAATGCAGCCGCAAAATAGTAGAATTTTGCCGCTCTCAGGAAAACCCTACCATGGCGTTATTCTTTCTAAGTCGCATGTCGCTCCCATATGTAATATGTTCTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATTATGATCCCTGCGGTTCTTTACTGTGAGGGAAAGAAATGGAAGATCGATTATTATGGGAATCGACGCGGTAAAGCCCTTGACACGAAACAGTGGAGGAAATTTGTTAATGATAATCATCTCAAGTGTGGAGATGCTTGCGTATTTGAGCTAATAGAATGCAGCAGCAGCGTAATCAAGTTCAGAGTTCAAATTCTCAGAGGCGACATCCCTTTTGAGCTGCACGAAAAGTTCAGCGGGGAATCTAGAAACACTCCTATACTCATTGACTAGCTAGCCCCTTCTGTGGTCTCTTAGTGTTCAGTAGTTCGGACTTGTCGACAGCATATATGGTTTGGAATCGGACGACCTGTTTGATAACCGTAAGTGGATATGTATGTTTATCACTAATGCTTATGTCTTAGTCAGGTACATTAGTAGGGAGAAGGAACTGGTTCATTAAGGAGAGATTAGCACTCTCAAATTCGCTGAAGTTGTAATATTACATTGTCGTTCGTGGTATCTTTGTTAGGGTAAAAACCGAAGACGTTTTCGAAATTTCAT

Coding sequence (CDS)

ATGCAATCGCAGGAGAAACCTCCGCCAGAGCCTACAGAAATGCAGCCGCAAAATAGTAGAATTTTGCCGCTCTCAGGAAAACCCTACCATGGCGTTATTCTTTCTAAGTCGCATGTCGCTCCCATATGTAATATGTTCTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATTATGATCCCTGCGGTTCTTTACTGTGAGGGAAAGAAATGGAAGATCGATTATTATGGGAATCGACGCGGTAAAGCCCTTGACACGAAACAGTGGAGGAAATTTGTTAATGATAATCATCTCAAGTGTGGAGATGCTTGCGTATTTGAGCTAATAGAATGCAGCAGCAGCGTAATCAAGTTCAGAGTTCAAATTCTCAGAGGCGACATCCCTTTTGAGCTGCACGAAAAGTTCAGCGGGGAATCTAGAAACACTCCTATACTCATTGACTAG

Protein sequence

MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHEKFSGESRNTPILID

Homology

[Close]

BLAST of CmoCh06G011810 vs. ExPASy Swiss-Prot
Match: Q7XLP4 (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-21
Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 5   EKPPPEPTEMQPQ---NSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIP 64
           E  PP P E +P+      +LPL GKPY   I+ KSHV P   + +P  F  +LP+   P
Sbjct: 65  EAAPPRPPEPEPEKVARHGVLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTP 124

Query: 65  AVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSV---IKF 124
           A L   G+ W + + G R  + L+   WR F  DN L+ GD CVFEL+         ++F
Sbjct: 125 ATLSWRGRSWGMRFTGGRLIQRLEA-GWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEF 184

Query: 125 RVQILRGDIPFELHEKFSGESRNTPILID 148
           RVQ+LR +IP  +  +  G +  TPI+ID
Sbjct: 185 RVQVLRAEIPARIRGRAGGYTSATPIVID 212

[Close]

BLAST of CmoCh06G011810 vs. ExPASy Swiss-Prot
Match: Q9LHY9 (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 55/145 (37.93%), Postives = 80/145 (55.17%), Query Frame = 0


Query: 7   PPPEPTEMQPQN-SRILPL-SGKPYHGVILSKSHVAPICNMFLPAKFHSVL--PAIMIPA 66
           PPP P     ++     PL +G P+   +++KSH+ P   M++P +F   L  P     A
Sbjct: 31  PPPPPASGSGEDWEATTPLAAGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAA 90

Query: 67  VLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIEC-SSSVIKFRVQ 126
           VL+  GK W   Y G+ + K LD   W +F  DN L  GDACVFEL+   ++  ++F+VQ
Sbjct: 91  VLHSGGKSWATSYCGHLKMKKLDA-GWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQ 150

Query: 127 ILRGDIPFELHEKFSGESRNTPILI 147
           ILRG +P E+     G + + PILI
Sbjct: 151 ILRGGLPAEVVTS-KGLTSDQPILI 173

[Close]

BLAST of CmoCh06G011810 vs. ExPASy Swiss-Prot
Match: Q8RYD1 (B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-06
Identity = 32/100 (32.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 32  VILSKSHVAPICNMFLPAKFHSVLPAIMI---PAVLYCEGKKW--KIDYYGNRRGKALDT 91
           V + +SHV   C + +P K+   +  ++I     V+  +  KW  K + +G R    + T
Sbjct: 225 VFMKRSHVVSKCFLTIPYKW--CVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGIST 284

Query: 92  KQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGD 127
             W+KFV DN+L+ GD CVFE     +  +   V I RG+
Sbjct: 285 -GWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

[Close]

BLAST of CmoCh06G011810 vs. ExPASy Swiss-Prot
Match: Q6AV21 (B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0619800 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-05
Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 19  SRILPLSGK-PYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKIDYYG 78
           S++    GK  + G+ LS  + A     +LP K H  L       VL C+G  W+I+   
Sbjct: 430 SKLAGSGGKGKFRGLELSSRYAA----SYLPDKNHQTL-------VLQCKGMIWQINLVV 489

Query: 79  NRR---GKA-LDTKQWRKFVNDNHLKCGDACVFEL 109
            RR   GK    T  WRKF +DN L+ GD C+FEL
Sbjct: 490 RRRYTKGKRWFLTAGWRKFAHDNRLRVGDFCLFEL 513

[Close]

BLAST of CmoCh06G011810 vs. ExPASy TrEMBL
Match: A0A6J1FTK2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=LOC111447171 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 3.9e-81
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60
           MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI
Sbjct: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120
           PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILRGDIPFELHEKFSGESRNTPILID 148
           QILRGDIPFELHEKFSGESRNTPILID
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of CmoCh06G011810 vs. ExPASy TrEMBL
Match: A0A6J1IDC2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LOC111472772 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.6e-80
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60
           MQSQEKPP EPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120
           PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSV+KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRV 120

Query: 121 QILRGDIPFELHEKFSGESRNTPILID 148
           QILRGDIPFELHEKFSGESRNTPILID
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of CmoCh06G011810 vs. ExPASy TrEMBL
Match: A0A6J1D033 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111016130 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 114/147 (77.55%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60
           MQSQEKPP E T M+P+N  I PLS KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I
Sbjct: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60

Query: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120
             VLYC GK+W +DYYGNRRGK+LDT+ WRKFVNDNHLK GDACVFEL+ECSSS +KFRV
Sbjct: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120

Query: 121 QILRGDIPFELHEKFSGESRNTPILID 148
           QILRGDIP +LH+KFSGES++TPI ID
Sbjct: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147

[Close]

BLAST of CmoCh06G011810 vs. ExPASy TrEMBL
Match: A0A0A0L3V3 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.4e-59
Identity = 111/147 (75.51%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60
           MQS  KPP E   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120
           PAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK GDA VFEL+ECSSS++KFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 121 QILRGDIPFELHEKFSGESRNTPILID 148
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]

BLAST of CmoCh06G011810 vs. ExPASy TrEMBL
Match: A0A6J1CYN6 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111015996 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.5e-58
Identity = 108/147 (73.47%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60
           MQSQEKPP EP EM+P+   I PLS KP+HGVIL KSHVAP   M LPAKFHSVLPAI+I
Sbjct: 1   MQSQEKPPSEPAEMEPRIDEIFPLSNKPFHGVILGKSHVAPAYLMSLPAKFHSVLPAIVI 60

Query: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120
             V+YC GK+W++DYYGNRRG+ LDT+ WRKFV++NHLK GDACVFEL+ECSSS++KFRV
Sbjct: 61  HGVVYCGGKEWRVDYYGNRRGRTLDTRGWRKFVDENHLKYGDACVFELMECSSSMVKFRV 120

Query: 121 QILRGDIPFELHEKFSGESRNTPILID 148
           QILRGDIP +LH+KF GESR+TPI ID
Sbjct: 121 QILRGDIPVQLHDKFRGESRDTPINID 147

[Close]

BLAST of CmoCh06G011810 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07
Identity = 32/100 (32.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 32  VILSKSHVAPICNMFLPAKFHSVLPAIMI---PAVLYCEGKKW--KIDYYGNRRGKALDT 91
           V + +SHV   C + +P K+   +  ++I     V+  +  KW  K + +G R    + T
Sbjct: 225 VFMKRSHVVSKCFLTIPYKW--CVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGIST 284

Query: 92  KQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGD 127
             W+KFV DN+L+ GD CVFE     +  +   V I RG+
Sbjct: 285 -GWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

[Close]

BLAST of CmoCh06G011810 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 44.7 bits (104), Expect = 7.6e-05
Identity = 31/97 (31.96%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 28  PYHGVILSKSHVAPICNMFLPAKF-HSVLPAIMIPAVLYCEGKKWKIDYYGNRRGKALDT 87
           PY  V+L  S++   C M+LP+ F    L  I     L    K+W +     + G+A  +
Sbjct: 127 PYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCL-YKAGRAKFS 186

Query: 88  KQWRKFVNDNHLKCGDACVFELIECSSSVIK---FRV 121
           + W +F  +N++  GD CVFEL+     V++   FRV
Sbjct: 187 QGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRV 222

[Close]

BLAST of CmoCh06G011810 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 44.7 bits (104), Expect = 7.6e-05
Identity = 31/97 (31.96%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 28  PYHGVILSKSHVAPICNMFLPAKF-HSVLPAIMIPAVLYCEGKKWKIDYYGNRRGKALDT 87
           P+  V+L  S++   C M+LP+ F    L  I     +    K+W +     + G+A  +
Sbjct: 242 PFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCL-YKAGRAKFS 301

Query: 88  KQWRKFVNDNHLKCGDACVFELIECSSSVIK---FRV 121
           + W +F  +N+L  GD CVFEL+     V+K   FRV
Sbjct: 302 QGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337

The following BLAST results are available for this feature:

BLAST of CmoCh06G011810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XLP4	1.5e-21	38.93	B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9LHY9	1.9e-16	37.93	B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q8RYD1	3.0e-06	32.00	B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2...	[more]
Q6AV21	2.0e-05	37.89	B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of CmoCh06G011810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTK2	3.9e-81	100.00	B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1IDC2	5.6e-80	98.64	B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1D033	2.0e-61	77.55	B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0L3V3	5.4e-59	75.51	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 ...	[more]
A0A6J1CYN6	3.5e-58	73.47	B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN...	[more]

BLAST of CmoCh06G011810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33280.1	2.1e-07	32.00	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	7.6e-05	31.96	related to vernalization1 1	[more]
AT3G18990.1	7.6e-05	31.96	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 34..126 e-value: 3.9E-4 score: 29.7
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 34..119 e-value: 2.8E-12 score: 46.4
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 67..126 score: 10.785477
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 33..124 e-value: 7.1482E-18 score: 71.5901
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 14..126 e-value: 2.7E-19 score: 71.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 26..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31391:SF64	B3 DOMAIN-CONTAINING PROTEIN OS04G0386900	coord: 8..138
IPR044837	B3 domain-containing protein REM16-like	PANTHER	PTHR31391	B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED	coord: 8..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G011810.1	CmoCh06G011810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding