CmoCh06G010820 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G010820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	actin-depolymerizing factor
Location	Cmo_Chr06: 8354944 .. 8355431 (-)
RNA-Seq Expression	CmoCh06G010820
Synteny	CmoCh06G010820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTCATGACGACTGCAAATTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATTGTGTTCAAGATTGATGAGAATATCCAACAGGTGATGGTCGAGCGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCACAGCCATCCCTGCTAACGAGTGTCGTTACGCTGTTTATGATTTCGATTTCACAACTGACGAGAATTGCCAAAAGAGCAAGATCTTCTTTATTGCTTGGTATTATCTCGACGTATTTATCGTACTATTTAATTTACTAACTTACGAACCTTTTTTTTTCCTTAAATTTTTGTAATTTGTTTATGTAGGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCGAGTTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

mRNA sequence

ATGGCAGTTCATGACGACTGCAAATTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATTGTGTTCAAGATTGATGAGAATATCCAACAGGTGATGGTCGAGCGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCACAGCCATCCCTGCTAACGAGTGTCGTTACGCTGTTTATGATTTCGATTTCACAACTGACGAGAATTGCCAAAAGAGCAAGATCTTCTTTATTGCTTGGTATTATCTCGACGTATTTATCGTACTATTTAATTTACTAACTTACGAACCTTTTTTTTTCCTTAAATTTTTGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCGAGTTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

Coding sequence (CDS)

ATGGCAGTTCATGACGACTGCAAATTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATTGTGTTCAAGATTGATGAGAATATCCAACAGGTGATGGTCGAGCGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCACAGCCATCCCTGCTAACGAGTGTCGTTACGCTGTTTATGATTTCGATTTCACAACTGACGAGAATTGCCAAAAGAGCAAGATCTTCTTTATTGCTTGGTATTATCTCGACGTATTTATCGTACTATTTAATTTACTAACTTACGAACCTTTTTTTTTCCTTAAATTTTTGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCGAGTTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

Protein sequence

MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRYAVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLYASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI

Homology

[Close]

BLAST of CmoCh06G010820 vs. ExPASy Swiss-Prot
Match: P30175 (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.3e-51
Identity = 101/155 (65.16%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKF++LKAKR FRFIVFKI+E +QQV VER+G  +E+Y++F   +P NECRY
Sbjct: 8   MAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFI+W                        SPD+S++RSKMLY
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARA 156
           AS++DRFKRELDGIQVELQATDPSEMS+DIIKARA
Sbjct: 128 ASTKDRFKRELDGIQVELQATDPSEMSMDIIKARA 138

[Close]

BLAST of CmoCh06G010820 vs. ExPASy Swiss-Prot
Match: Q6EUH7 (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-50
Identity = 99/156 (63.46%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKFL+LKAKR FRFIVFKI+E +QQV+V+R+G   E+Y++F   +PA+ECRY
Sbjct: 8   MAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFI+W                        +PD+S++RSKMLY
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISW------------------------APDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DI+K+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRAL 139

[Close]

BLAST of CmoCh06G010820 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-50
Identity = 100/154 (64.94%), Postives = 117/154 (75.97%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           M V D+CKLKFL+LKAKR +RFIVFKIDE  QQVM++++G  +ETY +F  +IP +ECRY
Sbjct: 8   MHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYD+DFTT ENCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVYDYDFTTPENCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKAR 155
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK R
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh06G010820 vs. ExPASy Swiss-Prot
Match: Q7XSN9 (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-50
Identity = 100/156 (64.10%), Postives = 120/156 (76.92%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKF +LK+KR FRFI FKIDE  QQV+V+R+G   +TY++F  ++PA+ECRY
Sbjct: 8   MAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFI+W                        SPD+SK+RSKMLY
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISW------------------------SPDTSKVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DI+KARA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSMDIVKARAL 139

[Close]

BLAST of CmoCh06G010820 vs. ExPASy Swiss-Prot
Match: Q570Y6 (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana OX=3702 GN=ADF8 PE=2 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 4.7e-50
Identity = 97/154 (62.99%), Postives = 120/154 (77.92%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           M V+D+CK+KFL+LKAKR +RFIVFKIDE  QQV +E++G  +ETY++F ++IP +ECRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTT++NCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKAR 155
           ASS+DRFKRE++GIQVELQATDPSEMS+DIIK R
Sbjct: 128 ASSKDRFKREMEGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh06G010820 vs. ExPASy TrEMBL
Match: A0A6J1FY87 (actin-depolymerizing factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC111449032 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 132/156 (84.62%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY
Sbjct: 20  MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 79

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTTDENCQKSKIFFIAW                        SPDSSKIRSKMLY
Sbjct: 80  AVYDFDFTTDENCQKSKIFFIAW------------------------SPDSSKIRSKMLY 139

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI
Sbjct: 140 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 151

[Close]

BLAST of CmoCh06G010820 vs. ExPASy TrEMBL
Match: A0A6J1IAQ3 (actin-depolymerizing factor 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473285 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63
Identity = 130/156 (83.33%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFL AIPANECRY
Sbjct: 8   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAIPANECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTTDENCQKSKIFFIAW                        SPDSS+IRSKMLY
Sbjct: 68  AVYDFDFTTDENCQKSKIFFIAW------------------------SPDSSRIRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI
Sbjct: 128 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 139

[Close]

BLAST of CmoCh06G010820 vs. ExPASy TrEMBL
Match: A0A6J1IGS4 (actin-depolymerizing factor-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111473285 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63
Identity = 130/156 (83.33%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFL AIPANECRY
Sbjct: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAIPANECRY 60

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTTDENCQKSKIFFIAW                        SPDSS+IRSKMLY
Sbjct: 61  AVYDFDFTTDENCQKSKIFFIAW------------------------SPDSSRIRSKMLY 120

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI
Sbjct: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 132

[Close]

BLAST of CmoCh06G010820 vs. ExPASy TrEMBL
Match: A0A6J1IBU0 (actin-depolymerizing factor 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473285 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63
Identity = 130/156 (83.33%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFL AIPANECRY
Sbjct: 20  MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAIPANECRY 79

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTTDENCQKSKIFFIAW                        SPDSS+IRSKMLY
Sbjct: 80  AVYDFDFTTDENCQKSKIFFIAW------------------------SPDSSRIRSKMLY 139

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI
Sbjct: 140 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 151

[Close]

BLAST of CmoCh06G010820 vs. ExPASy TrEMBL
Match: A0A6J1EFB4 (actin-depolymerizing factor 7-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111431994 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.2e-57
Identity = 117/156 (75.00%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHD+CKLKFLDLKAKRK+RFIVFKIDE IQQVMVE+VGGHDETY +F  +IPANECRY
Sbjct: 8   MAVHDECKLKFLDLKAKRKYRFIVFKIDERIQQVMVEKVGGHDETYADFTASIPANECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDFTTDENCQKSKI+FIAW                        SPD+SKIRSKMLY
Sbjct: 68  AVFDFDFTTDENCQKSKIYFIAW------------------------SPDTSKIRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS DIIKARA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAL 139

[Close]

BLAST of CmoCh06G010820 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-51
Identity = 100/154 (64.94%), Postives = 117/154 (75.97%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           M V D+CKLKFL+LKAKR +RFIVFKIDE  QQVM++++G  +ETY +F  +IP +ECRY
Sbjct: 8   MHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYD+DFTT ENCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVYDYDFTTPENCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKAR 155
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK R
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh06G010820 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 198.7 bits (504), Expect = 3.3e-51
Identity = 97/154 (62.99%), Postives = 120/154 (77.92%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           M V+D+CK+KFL+LKAKR +RFIVFKIDE  QQV +E++G  +ETY++F ++IP +ECRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTT++NCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKAR 155
           ASS+DRFKRE++GIQVELQATDPSEMS+DIIK R
Sbjct: 128 ASSKDRFKREMEGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh06G010820 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 198.4 bits (503), Expect = 4.4e-51
Identity = 100/156 (64.10%), Postives = 120/156 (76.92%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKFL+LK+KR +RFI+F+ID   QQV+VE++G  DETY++F  ++PANECRY
Sbjct: 8   MAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASLPANECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFIAW                        SPDSS++R KM+Y
Sbjct: 68  AVFDFDFITDENCQKSKIFFIAW------------------------SPDSSRVRMKMVY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS DIIK+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRAL 137

[Close]

BLAST of CmoCh06G010820 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 )

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-48
Identity = 98/156 (62.82%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKFL+LKAKR +RFI+F+ID   QQV+VE++G   E Y++F   +P NECRY
Sbjct: 8   MAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYLPPNECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTT EN QKSKIFFIAW                        SPDSS++R KM+Y
Sbjct: 68  AVYDFDFTTAENIQKSKIFFIAW------------------------SPDSSRVRMKMVY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSLDIIKSRAL 137

[Close]

BLAST of CmoCh06G010820 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 188.3 bits (477), Expect = 4.5e-48
Identity = 93/155 (60.00%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHDDCKL+FL+LKAKR  RFIV+KI+E  +QV+VE+VG   +TY  F   +PA+ECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           A+YDFDF T ENCQKSKIFFIAW                         PD +K+RSKM+Y
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAW------------------------CPDIAKVRSKMIY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARA 156
           ASS+DRFKRELDGIQVELQATDP+EM +D+ ++RA
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRA 138

The following BLAST results are available for this feature:

BLAST of CmoCh06G010820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30175	3.3e-51	65.16	Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1	[more]
Q6EUH7	1.2e-50	63.46	Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 P...	[more]
Q9LQ81	1.6e-50	64.94	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=...	[more]
Q7XSN9	1.6e-50	64.10	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 P...	[more]
Q570Y6	4.7e-50	62.99	Actin-depolymerizing factor 8 OS=Arabidopsis thaliana OX=3702 GN=ADF8 PE=2 SV=2	[more]

BLAST of CmoCh06G010820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FY87	2.7e-64	84.62	actin-depolymerizing factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC111449032...	[more]
A0A6J1IAQ3	2.3e-63	83.33	actin-depolymerizing factor 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1IGS4	2.3e-63	83.33	actin-depolymerizing factor-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1IBU0	2.3e-63	83.33	actin-depolymerizing factor 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EFB4	3.2e-57	75.00	actin-depolymerizing factor 7-like isoform X3 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CmoCh06G010820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01750.1	1.2e-51	64.94	actin depolymerizing factor 11	[more]
AT4G00680.1	3.3e-51	62.99	actin depolymerizing factor 8	[more]
AT4G25590.1	4.4e-51	64.10	actin depolymerizing factor 7	[more]
AT5G52360.1	1.6e-48	62.82	actin depolymerizing factor 10	[more]
AT3G46010.1	4.5e-48	60.00	actin depolymerizing factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 5..156 e-value: 7.3E-43 score: 158.4
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 100..153 e-value: 1.0E-12 score: 47.9 coord: 7..83 e-value: 1.1E-16 score: 60.7
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 1..156 score: 28.253389
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..156 e-value: 3.3E-46 score: 159.0
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..83
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 102..156
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 1..155 e-value: 3.51549E-54 score: 165.423
None	No IPR available	PANTHER	PTHR11913:SF92	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 102..156
None	No IPR available	PANTHER	PTHR11913:SF92	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 1..83
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G010820.1	CmoCh06G010820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003779	actin binding