CmoCh06G009600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G009600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NAC domain-containing protein 62-like
Location	Cmo_Chr06: 7516338 .. 7517602 (-)
RNA-Seq Expression	CmoCh06G009600
Synteny	CmoCh06G009600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCACCGCTGAATTTCCGTTTGCTTCTCCATTCCCGACTGGTTTTGGTTTCCGTCCCACGGAGGAGGAGCTCATCACCTACTACCTAAAGAACAAGAATGTTGGCAAGGAGTATCTTGTTAGATTTATCAAGGAGATTGATCTGTACAAGTTCGATCCCGAGCAACTCCCAGGTATTTATTTATCAATTTCCTGATTTTAGCTTTTGAAGATGGAGCACACCTCTGATTCTTTCCTTTCCCCTGTTCCTATGCAGACAAATCATTTATCCCCTCTGATAATTTTGAGTGGTTTTTCTTTCGGGCCAACACCTCCAACACTAAAAGAACCACCACTACTGGCTGCTGGAAATCCACCGGTAAACCCCGCCGAATCAAGGCTCGTGGAACCAACGAACTGATCGGAACTAGACACATTTTTGTGTTCCATCGAGGCAAGGGAGCCAAGGCTGTAAAGACCAATTGGGTGATACACGAGTATATGCTTCACCCACTTACAGACATCACTTCCCAGGTCTCATTTCTGTTTATATCCATTTCTCATGTATCCCTAACCTCTTCTGGCTTCTGGGTCATTTCATCATCGCCTTCATGAGTATGTGTGCGTTTCATGTATTTTTCAGAATTGACCTTTTTGTTATAGCATTGTGCTTCCTATGATGTGCAGCCATTCATCATTATTCGATTGAAGAAAAATGCAGAAGAGAGACATGTTTGTGACCAAGAAGATGGACAGAACAGTGCCATTGCTTCTCCCCGGACTAAGAAAGTCACACAGATGAACAGAGACGAACAATCGATCTGTGAGCCCCTAGGGAGTCGTACCCAACAACCTGTGAATGCCTATGATGATGATGATGATGGTGAAAATGAAAATCTCACACAGTTTGTTAACTCGTTAATCAAGGATGGAAGCTTAGATGACGATGCGACCTCAAGGATATGTAGGTCCCCATTGCGTTCCGAAGTAAATAACCAATCGTTTGAGAGTGAATTTGATGTCTTGATGAAGTTGGTGTCCGATGATAAAAAATGGGAGGAGATGACATCAAACAACCACTTCAACCGCCGCTACAACAAAACAAGGATTGTGAGGACTCATCAACTTCAAAGTGGACGTTTCCAACTTCAAGGTGGATATTGTTGTGGAGACACTAATACCAATAATACATACGGACTGATCTATGTTGCTGTAGCATTGCTAGGCATCCTAATGTTTGCCAAGATGTGGTGCTATACCGAGACAGACGCTGAAGATTAG

mRNA sequence

ATGGCCGCCACCGCTGAATTTCCGTTTGCTTCTCCATTCCCGACTGGTTTTGGTTTCCGTCCCACGGAGGAGGAGCTCATCACCTACTACCTAAAGAACAAGAATGTTGGCAAGGAGTATCTTGTTAGATTTATCAAGGAGATTGATCTGTACAAGTTCGATCCCGAGCAACTCCCAGACAAATCATTTATCCCCTCTGATAATTTTGAGTGGTTTTTCTTTCGGGCCAACACCTCCAACACTAAAAGAACCACCACTACTGGCTGCTGGAAATCCACCGGTAAACCCCGCCGAATCAAGGCTCGTGGAACCAACGAACTGATCGGAACTAGACACATTTTTGTGTTCCATCGAGGCAAGGGAGCCAAGGCTGTAAAGACCAATTGGGTGATACACGAGTATATGCTTCACCCACTTACAGACATCACTTCCCAGGTCTCATTTCTGTTTATATCCATTTCTCATCATTGTGCTTCCTATGATGTGCAGCCATTCATCATTATTCGATTGAAGAAAAATGCAGAAGAGAGACATGTTTGTGACCAAGAAGATGGACAGAACAGTGCCATTGCTTCTCCCCGGACTAAGAAAGTCACACAGATGAACAGAGACGAACAATCGATCTGTGAGCCCCTAGGGAGTCGTACCCAACAACCTGTGAATGCCTATGATGATGATGATGATGGTGAAAATGAAAATCTCACACAGTTTGTTAACTCGTTAATCAAGGATGGAAGCTTAGATGACGATGCGACCTCAAGGATATGTAGGTCCCCATTGCGTTCCGAAGTAAATAACCAATCGTTTGAGAGTGAATTTGATGTCTTGATGAAGTTGGTGTCCGATGATAAAAAATGGGAGGAGATGACATCAAACAACCACTTCAACCGCCGCTACAACAAAACAAGGATTGTGAGGACTCATCAACTTCAAAGTGGACGTTTCCAACTTCAAGGTGGATATTGTTGTGGAGACACTAATACCAATAATACATACGGACTGATCTATGTTGCTGTAGCATTGCTAGGCATCCTAATGTTTGCCAAGATGTGGTGCTATACCGAGACAGACGCTGAAGATTAG

Coding sequence (CDS)

ATGGCCGCCACCGCTGAATTTCCGTTTGCTTCTCCATTCCCGACTGGTTTTGGTTTCCGTCCCACGGAGGAGGAGCTCATCACCTACTACCTAAAGAACAAGAATGTTGGCAAGGAGTATCTTGTTAGATTTATCAAGGAGATTGATCTGTACAAGTTCGATCCCGAGCAACTCCCAGACAAATCATTTATCCCCTCTGATAATTTTGAGTGGTTTTTCTTTCGGGCCAACACCTCCAACACTAAAAGAACCACCACTACTGGCTGCTGGAAATCCACCGGTAAACCCCGCCGAATCAAGGCTCGTGGAACCAACGAACTGATCGGAACTAGACACATTTTTGTGTTCCATCGAGGCAAGGGAGCCAAGGCTGTAAAGACCAATTGGGTGATACACGAGTATATGCTTCACCCACTTACAGACATCACTTCCCAGGTCTCATTTCTGTTTATATCCATTTCTCATCATTGTGCTTCCTATGATGTGCAGCCATTCATCATTATTCGATTGAAGAAAAATGCAGAAGAGAGACATGTTTGTGACCAAGAAGATGGACAGAACAGTGCCATTGCTTCTCCCCGGACTAAGAAAGTCACACAGATGAACAGAGACGAACAATCGATCTGTGAGCCCCTAGGGAGTCGTACCCAACAACCTGTGAATGCCTATGATGATGATGATGATGGTGAAAATGAAAATCTCACACAGTTTGTTAACTCGTTAATCAAGGATGGAAGCTTAGATGACGATGCGACCTCAAGGATATGTAGGTCCCCATTGCGTTCCGAAGTAAATAACCAATCGTTTGAGAGTGAATTTGATGTCTTGATGAAGTTGGTGTCCGATGATAAAAAATGGGAGGAGATGACATCAAACAACCACTTCAACCGCCGCTACAACAAAACAAGGATTGTGAGGACTCATCAACTTCAAAGTGGACGTTTCCAACTTCAAGGTGGATATTGTTGTGGAGACACTAATACCAATAATACATACGGACTGATCTATGTTGCTGTAGCATTGCTAGGCATCCTAATGTTTGCCAAGATGTGGTGCTATACCGAGACAGACGCTGAAGATTAG

Protein sequence

MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNFEWFFFRANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLTDITSQVSFLFISISHHCASYDVQPFIIIRLKKNAEERHVCDQEDGQNSAIASPRTKKVTQMNRDEQSICEPLGSRTQQPVNAYDDDDDGENENLTQFVNSLIKDGSLDDDATSRICRSPLRSEVNNQSFESEFDVLMKLVSDDKKWEEMTSNNHFNRRYNKTRIVRTHQLQSGRFQLQGGYCCGDTNTNNTYGLIYVAVALLGILMFAKMWCYTETDAED

Homology

[Close]

BLAST of CmoCh06G009600 vs. ExPASy Swiss-Prot
Match: O49697 (NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-27
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 0


Query: 10  ASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNF 69
           +S  P GF F PT+EELI YYL  K  G E  +  I  IDLYKFDP +LP KSF+P+ + 
Sbjct: 3   SSCLPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNRDL 62

Query: 70  EWFFF------RANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAK 129
           EWFFF       AN S T R T  G WK+TGK R+I  + ++ + G R   VF+ G+   
Sbjct: 63  EWFFFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRAPL 122

Query: 130 AVKTNWVIHEYMLHPLTD 142
             +TNW +HEY L  + D
Sbjct: 123 GDRTNWFMHEYRLCDIDD 140

[Close]

BLAST of CmoCh06G009600 vs. ExPASy Swiss-Prot
Match: Q9FFI5 (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.6e-27
Identity = 64/129 (49.61%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 14  PTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNFEWFF 73
           P GF F PT+EELITYYLK K  G+E  +  I E+DLYK +P  LP KS IPS + EWFF
Sbjct: 7   PPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEWFF 66

Query: 74  FR------ANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAKAVKT 133
           F        N S T R T  G WK+TGK RR+  R  +  IGT+   V++RG+    ++T
Sbjct: 67  FSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIRT 126

Query: 134 NWVIHEYML 137
            WV+HEY L
Sbjct: 127 GWVMHEYRL 133

[Close]

BLAST of CmoCh06G009600 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 7.6e-27
Identity = 82/220 (37.27%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 10  ASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNF 69
           +S  P GF F PT+EELI YYLK K  G E  +  I  IDLY FDP +LPDKSF+P+ + 
Sbjct: 3   SSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDM 62

Query: 70  EWFFFRA------NTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAK 129
           EW+FF +      N   T R T  G WK+TGK R+I +R ++ +IG R   VF++G+   
Sbjct: 63  EWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSR-SSSIIGYRKTLVFYKGRAPL 122

Query: 130 AVKTNWVIHEYMLHPLTDITSQVSFLFISISHHCASYDVQPFIIIRLKKNAEERHVCDQE 189
             ++NW++HEY L    D TSQ S         C     +  +   +K N + R +  ++
Sbjct: 123 GDRSNWIMHEYRL--CDDDTSQGSQNLKGAFVLC-----RVAMKNEIKTNTKIRKIPSEQ 182

Query: 190 ---DGQNSAIASPRTKKVTQMNRDE----QSICEPLGSRT 217
               G++S ++S    +VT  +RDE     S   P+ + T
Sbjct: 183 TIGSGESSGLSS----RVTSPSRDETMPFHSFANPVSTET 210

[Close]

BLAST of CmoCh06G009600 vs. ExPASy Swiss-Prot
Match: A4VCM0 (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.9e-26
Identity = 62/129 (48.06%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 14  PTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNFEWFF 73
           P GF F PT+EELITYYLK K  G E  +  I E+DLYK +P  LP KS +PS + EW+F
Sbjct: 7   PPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKDQEWYF 66

Query: 74  FR------ANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAKAVKT 133
           F        N S T R T  G WK+TGK RR+  R  +  IGT+   V++RG+    ++T
Sbjct: 67  FSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIRT 126

Query: 134 NWVIHEYML 137
            WV+HEY L
Sbjct: 127 GWVMHEYRL 133

[Close]

BLAST of CmoCh06G009600 vs. ExPASy Swiss-Prot
Match: F4IED2 (NAC domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=NAC013 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.1e-24
Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 16  GFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNFEWFFF- 75
           GF F PT+EEL+ YYLK K   K+  V  I E D+YKFDPE+LP+K+   + + +WFFF 
Sbjct: 13  GFRFHPTDEELVVYYLKRKIRRKKLRVEAIGETDVYKFDPEELPEKALYKTRDRQWFFFS 72

Query: 76  ---RANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAKAVKTNWVI 135
              R + S + R T  G WK+TGK R I     +  +G +   VFHRG+     +TNWV+
Sbjct: 73  LRDRKHGSRSSRATERGYWKATGKDRVIHC--DSRPVGEKKTLVFHRGRAPNGERTNWVM 132

Query: 136 HEYMLH 138
           HEY LH
Sbjct: 133 HEYTLH 136

[Close]

BLAST of CmoCh06G009600 vs. ExPASy TrEMBL
Match: A0A6J1IAW4 (NAC domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC111472913 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.4e-113
Identity = 243/398 (61.06%), Postives = 270/398 (67.84%), Query Frame = 0


Query: 1   MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPD 60
           MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVG E +V FIKEIDLYKF+PEQLPD
Sbjct: 1   MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGNESVVSFIKEIDLYKFEPEQLPD 60

Query: 61  KSFIPSDNFEWFFFRANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGK 120
           KSF PSDNFEWFFFRANTS+TKRTTTTG WKSTGKPR IKARGTNE+I +R IFVFHRGK
Sbjct: 61  KSFFPSDNFEWFFFRANTSDTKRTTTTGYWKSTGKPRPIKARGTNEVIASRQIFVFHRGK 120

Query: 121 GAKAVKTNWVIHEYMLHPLTDITSQVSFLFISISHHCASYDVQPFIIIRLKKNAEERHVC 180
           G  A+KTNWVIHEY  HP T I SQ                  PF++ RLK+NA      
Sbjct: 121 GGNAIKTNWVIHEYKPHPDTKIPSQ-----------------HPFLVFRLKENA------ 180

Query: 181 DQEDGQNSAIASPRTKKVTQ------MNRDEQ-SICEPLGSRTQQPVNAYDDDDD----- 240
             EDGQ+S +AS RTKKVTQ      MNRDEQ S CEPLGS TQQP++AYDD  +     
Sbjct: 181 --EDGQSSTVASHRTKKVTQGGEIREMNRDEQLSECEPLGSCTQQPIDAYDDGVEVNTQQ 240

Query: 241 --------GENENLTQFVNSLI-KDGSLDDDATSRICRSPLRS----------------- 300
                    E+EN TQ +  +   +GSLDDDATS ICRSPLRS                 
Sbjct: 241 QIQPGAGASEDENFTQILKWIFDPEGSLDDDATSTICRSPLRSEPEPEPVLTDFQPSNGN 300

Query: 301 --EVNNQSFESEFDVLMKLVSD---DKKWEEMTSNNHFNRRYNKTRIVRTHQLQSGRFQL 353
             EVN +S ESEFD   + ++    DK  +EMT NNHFNRRY K R VRT +LQSG   L
Sbjct: 301 RGEVNKRSSESEFDEYKQWMNSEVKDKNLDEMTPNNHFNRRYTKRRHVRTDKLQSGHIVL 360

[Close]

BLAST of CmoCh06G009600 vs. ExPASy TrEMBL
Match: A0A6J1I9X2 (uncharacterized protein LOC111472944 OS=Cucurbita maxima OX=3661 GN=LOC111472944 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 5.1e-111
Identity = 242/398 (60.80%), Postives = 266/398 (66.83%), Query Frame = 0


Query: 1   MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPD 60
           MAATAEFPFASPFP GFGFRPTEEELITYYLKNKNVG E +VRFIKEIDLYKF+P+QLPD
Sbjct: 1   MAATAEFPFASPFPIGFGFRPTEEELITYYLKNKNVGNESVVRFIKEIDLYKFEPDQLPD 60

Query: 61  KSFIPSDNFEWFFFRANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGK 120
           KSF PSDNFEWFFFRANTS+TKRTTTTG WKSTGKPR IKARGTNE+I +R IFVFHRGK
Sbjct: 61  KSFFPSDNFEWFFFRANTSDTKRTTTTGYWKSTGKPRPIKARGTNEVIASRQIFVFHRGK 120

Query: 121 GAKAVKTNWVIHEYMLHPLTDITSQVSFLFISISHHCASYDVQPFIIIRLKKNAEERHVC 180
           G  A+KTNWVIHEY  HP T I SQ                  PF++ RLK+NA      
Sbjct: 121 GGNAIKTNWVIHEYKPHPDTKIPSQ-----------------HPFLVFRLKENA------ 180

Query: 181 DQEDGQNSAIASPRTKKVTQ------MNRDEQ-SICEPLGSRTQQPVNAYDDDDD----- 240
             EDGQ+S +AS RTKKVTQ      MNRDEQ S CEPLGS TQQP+NAYDD  +     
Sbjct: 181 --EDGQSSTVASHRTKKVTQGGEIREMNRDEQLSECEPLGSCTQQPINAYDDGVEVNTQQ 240

Query: 241 --------GENENLTQFVNSLI-KDGSLDDDATSRICRSPLRS----------------- 300
                    E+EN TQ +  +   +GSLDDDATS ICRSPLRS                 
Sbjct: 241 QIQPGAGASEDENFTQNLKWIFDPEGSLDDDATSTICRSPLRSEPEPEPVLTDFQPSNGN 300

Query: 301 --EVNNQSFESEFDVL---MKLVSDDKKWEEMTSNNHFNRRYNKTRIVRTHQLQSGRFQL 353
             EVN +  ESEFD     M     DK  +EMT NNHFNRRY K R V T +LQSG   L
Sbjct: 301 RGEVNKRLSESEFDEYKQGMNSEVKDKNLDEMTPNNHFNRRYIKRRHVMTDKLQSGYIVL 360

[Close]

BLAST of CmoCh06G009600 vs. ExPASy TrEMBL
Match: A0A6J1FE44 (NAC domain-containing protein 96-like OS=Cucurbita moschata OX=3662 GN=LOC111443146 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 3.6e-104
Identity = 218/362 (60.22%), Postives = 244/362 (67.40%), Query Frame = 0


Query: 1   MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPD 60
           MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPD
Sbjct: 1   MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPD 60

Query: 61  KSFIPSDNFEWFFFRANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGK 120
           KS+ PS NFEWFFFRANT+N KRTT TG W+STG PRRIKAR TNE+I T HI+VFHRGK
Sbjct: 61  KSYFPSSNFEWFFFRANTANNKRTTATGGWRSTGDPRRIKARETNEVIATCHIYVFHRGK 120

Query: 121 GAKAVKTNWVIHEYMLHPLTDITSQVSFLFISISHHCASYDVQPFIIIRLKKNAEERHVC 180
           G  A+KTNWVIHEY LH LTDITS                  QPFII RLKKNAEER V 
Sbjct: 121 GGNAIKTNWVIHEYKLHTLTDITS------------------QPFIIFRLKKNAEERRVS 180

Query: 181 --DQEDGQNSAIASPRTKKV------TQMNRDEQSICEPLGSRTQQPVNAYDD------- 240
             DQEDGQNS +AS RTKKV       +MNRDEQSIC+PLGS TQQPVNAYDD       
Sbjct: 181 IRDQEDGQNSTVASHRTKKVKRGGEIREMNRDEQSICKPLGSCTQQPVNAYDDNGEVNMQ 240

Query: 241 -----DDDGENENLTQFVN-SLIKDGSLDDDATSRICRSPLRSE-----VNNQSFESEFD 300
                D D    N+T+F+N ++I D   + + T  +C S  RSE     +  Q  ES+ D
Sbjct: 241 PIQLGDGDSAYGNMTEFINKTVIWDDIFNYEVTPNMCGSLRRSEPQPGLMYTQQSESQLD 300

Query: 301 VLMKLVSDDKKWEEMTSNNHFNRRYNKTRIVRTHQLQSGRFQLQGGYCCGDTNTNNTYGL 337
            L   V DDK W+EMTSNN               + +   +Q QGG+    TN+N  +GL
Sbjct: 301 SLRNFVHDDKNWDEMTSNN--------------QEWEGMYYQFQGGF-SSQTNSNTAFGL 329

[Close]

BLAST of CmoCh06G009600 vs. ExPASy TrEMBL
Match: A0A6J1IAV9 (protein CUP-SHAPED COTYLEDON 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472910 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 8.3e-93
Identity = 200/361 (55.40%), Postives = 231/361 (63.99%), Query Frame = 0


Query: 1   MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPD 60
           MAA  +FPF S  P G+GFRPTEEELIT+YLKNK +G+E+LV+FIKEIDLYKFDPEQLPD
Sbjct: 1   MAAIDDFPFLSLLPVGYGFRPTEEELITHYLKNKILGQEFLVKFIKEIDLYKFDPEQLPD 60

Query: 61  KSFIPSDNFEWFFFRANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGK 120
           KS+ PS NFEWFFFRANT   KRTT TG W+STG PRRIKAR TNE+I T HI+VFHRGK
Sbjct: 61  KSYFPSSNFEWFFFRANTGINKRTTATGSWRSTGDPRRIKARETNEVIATCHIYVFHRGK 120

Query: 121 GAKAVKTNWVIHEYMLHPLTDITSQVSFLFISISHHCASYDVQPFIIIRLKKNAEERHVC 180
           G  A+KTNWVIHEY LH LTDITS                  QPFII RLKKNAEER V 
Sbjct: 121 GGNAIKTNWVIHEYKLHTLTDITS------------------QPFIIFRLKKNAEERDVS 180

Query: 181 --DQEDGQNSAIASPRTKKV------TQMNRDEQSICEPLGSRTQQPVNAYDD------- 240
             DQEDGQNS +AS RTKKV       ++NRDEQSIC+PLGS  QQPVNAYDD       
Sbjct: 181 IRDQEDGQNSTVASHRTKKVKRGGEIRKINRDEQSICKPLGSCAQQPVNAYDDNEVNMQT 240

Query: 241 ----DDDGENENLTQFVNS-LIKDGSLDDDATSRICRSPLRSE-----VNNQSFESEFDV 300
               D D  + N+T+ +NS +I D   +   T+ +CRS  RSE     ++ Q  ES+ D 
Sbjct: 241 IQLGDGDSADGNMTELLNSTVIWDDIFNHKLTANMCRSLRRSEPQPGLMDTQQSESQLDY 300

Query: 301 LMKLVSDDKKWEEMTSNNHFNRRYNKTRIVRTHQLQSGRFQLQGGYCCGDTNTNNTYGLI 337
           L   V DDK W+EMTSNN                      Q   G    +TN+N  +GL 
Sbjct: 301 LRNFVHDDKNWDEMTSNN----------------------QEWEGMYSSETNSNTAFGLP 321

[Close]

BLAST of CmoCh06G009600 vs. ExPASy TrEMBL
Match: A0A6J1IFR5 (NAC domain-containing protein 40-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472915 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57
Identity = 149/346 (43.06%), Postives = 192/346 (55.49%), Query Frame = 0


Query: 1   MAATAEFPFASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPD 60
           MA TAEF + S  P GF FRPTEE+LIT+YLKNKN G E +V FIKEIDLYKF+PEQLPD
Sbjct: 1   MATTAEFSYLSSLPAGFVFRPTEEQLITHYLKNKNDGNESVVSFIKEIDLYKFEPEQLPD 60

Query: 61  KSFIPSDNFEWFFFRANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGK 120
           KSFIPSDNFEWFFFRANT + +RTT TG WKSTG+PR IKARGTNE+IG+R IFVFHRG+
Sbjct: 61  KSFIPSDNFEWFFFRANTLDIERTTGTGSWKSTGEPRPIKARGTNEVIGSRQIFVFHRGR 120

Query: 121 GAKAVKTNWVIHEYMLHPLTDITSQVSFLFISISHHCASYDVQPFIIIRLKKNAEERHVC 180
           GAK VKTNWVI EY LHP T I SQ                  PF+I +LK N       
Sbjct: 121 GAKGVKTNWVIREYRLHPDTKIPSQ-----------------HPFLIFKLKDN------- 180

Query: 181 DQEDGQNSAIASPRTKKVTQMNRDEQSICEPLGSRTQQPVNAYDDDDDGENENLTQFVNS 240
              DG+   I  PR       +   QS C+      +  +  + + D+  + N  +   S
Sbjct: 181 -NADGEKKIIQKPRAGTSENPDNAIQSECDFEKQIMESVLGKHKNLDEMTSNNHEESEES 240

Query: 241 LIKDGSLDDDATSRICRSPLRSEVNNQSFESEFDVLMKLVSDDKKWEEMTSNNHFNRRYN 300
              D +  D+    + R   R +V  +S      +  K  S +    ++  +N       
Sbjct: 241 ---DDTYSDNQIKYLRRVLRRVKVYEESKPQNAPLPRKPGSTNVSPSKLQGDN------T 300

Query: 301 KTRIVRTHQLQSGRFQLQGGYCCGDTNTNNTYGLIYVAVALLGILM 347
           +T++V   Q  + R            + ++ + L+  A ALLGI+M
Sbjct: 301 RTQLVNQPQPSTKRIH----------HNSSQHPLVCFAKALLGIVM 302

[Close]

BLAST of CmoCh06G009600 vs. TAIR 10
Match: AT4G17980.1 (NAC domain containing protein 71 )

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-28
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 0


Query: 10  ASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNF 69
           +S  P GF F PT+EELI YYL  K  G E  +  I  IDLYKFDP +LP KSF+P+ + 
Sbjct: 3   SSCLPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNRDL 62

Query: 70  EWFFF------RANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAK 129
           EWFFF       AN S T R T  G WK+TGK R+I  + ++ + G R   VF+ G+   
Sbjct: 63  EWFFFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRAPL 122

Query: 130 AVKTNWVIHEYMLHPLTD 142
             +TNW +HEY L  + D
Sbjct: 123 GDRTNWFMHEYRLCDIDD 140

[Close]

BLAST of CmoCh06G009600 vs. TAIR 10
Match: AT5G17260.1 (NAC domain containing protein 86 )

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-28
Identity = 64/129 (49.61%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 14  PTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNFEWFF 73
           P GF F PT+EELITYYLK K  G+E  +  I E+DLYK +P  LP KS IPS + EWFF
Sbjct: 7   PPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEWFF 66

Query: 74  FR------ANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAKAVKT 133
           F        N S T R T  G WK+TGK RR+  R  +  IGT+   V++RG+    ++T
Sbjct: 67  FSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIRT 126

Query: 134 NWVIHEYML 137
            WV+HEY L
Sbjct: 127 GWVMHEYRL 133

[Close]

BLAST of CmoCh06G009600 vs. TAIR 10
Match: AT5G46590.1 (NAC domain containing protein 96 )

HSP 1 Score: 122.9 bits (307), Expect = 5.4e-28
Identity = 82/220 (37.27%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 10  ASPFPTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNF 69
           +S  P GF F PT+EELI YYLK K  G E  +  I  IDLY FDP +LPDKSF+P+ + 
Sbjct: 3   SSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDM 62

Query: 70  EWFFFRA------NTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAK 129
           EW+FF +      N   T R T  G WK+TGK R+I +R ++ +IG R   VF++G+   
Sbjct: 63  EWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSR-SSSIIGYRKTLVFYKGRAPL 122

Query: 130 AVKTNWVIHEYMLHPLTDITSQVSFLFISISHHCASYDVQPFIIIRLKKNAEERHVCDQE 189
             ++NW++HEY L    D TSQ S         C     +  +   +K N + R +  ++
Sbjct: 123 GDRSNWIMHEYRL--CDDDTSQGSQNLKGAFVLC-----RVAMKNEIKTNTKIRKIPSEQ 182

Query: 190 ---DGQNSAIASPRTKKVTQMNRDE----QSICEPLGSRT 217
               G++S ++S    +VT  +RDE     S   P+ + T
Sbjct: 183 TIGSGESSGLSS----RVTSPSRDETMPFHSFANPVSTET 210

[Close]

BLAST of CmoCh06G009600 vs. TAIR 10
Match: AT3G03200.1 (NAC domain containing protein 45 )

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-27
Identity = 62/129 (48.06%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 14  PTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNFEWFF 73
           P GF F PT+EELITYYLK K  G E  +  I E+DLYK +P  LP KS +PS + EW+F
Sbjct: 7   PPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKDQEWYF 66

Query: 74  FR------ANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAKAVKT 133
           F        N S T R T  G WK+TGK RR+  R  +  IGT+   V++RG+    ++T
Sbjct: 67  FSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIRT 126

Query: 134 NWVIHEYML 137
            WV+HEY L
Sbjct: 127 GWVMHEYRL 133

[Close]

BLAST of CmoCh06G009600 vs. TAIR 10
Match: AT1G65910.1 (NAC domain containing protein 28 )

HSP 1 Score: 118.6 bits (296), Expect = 1.0e-26
Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 14  PTGFGFRPTEEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNFEWFF 73
           P GF F PT+EEL+ YYLK K  G+   +  I EIDLYK +P  LP KS +PS + EWFF
Sbjct: 7   PPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKDLEWFF 66

Query: 74  FR------ANTSNTKRTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGAKAVKT 133
           F        N S T R T  G WK+TGK R++ +   + ++GT+   V++RG+     +T
Sbjct: 67  FSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSH--SRMVGTKKTLVYYRGRAPHGSRT 126

Query: 134 NWVIHEYML 137
           +WV+HEY L
Sbjct: 127 DWVMHEYRL 133

The following BLAST results are available for this feature:

BLAST of CmoCh06G009600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49697	1.5e-27	46.38	NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 ...	[more]
Q9FFI5	2.6e-27	49.61	NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 ...	[more]
Q9LS24	7.6e-27	37.27	NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 ...	[more]
A4VCM0	2.9e-26	48.06	NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 ...	[more]
F4IED2	2.1e-24	46.03	NAC domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=NAC013 PE=1 ...	[more]

BLAST of CmoCh06G009600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAW4	1.4e-113	61.06	NAC domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC11147291...	[more]
A0A6J1I9X2	5.1e-111	60.80	uncharacterized protein LOC111472944 OS=Cucurbita maxima OX=3661 GN=LOC111472944...	[more]
A0A6J1FE44	3.6e-104	60.22	NAC domain-containing protein 96-like OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A6J1IAV9	8.3e-93	55.40	protein CUP-SHAPED COTYLEDON 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1IFR5	1.1e-57	43.06	NAC domain-containing protein 40-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CmoCh06G009600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17980.1	1.1e-28	46.38	NAC domain containing protein 71	[more]
AT5G17260.1	1.9e-28	49.61	NAC domain containing protein 86	[more]
AT5G46590.1	5.4e-28	37.27	NAC domain containing protein 96	[more]
AT3G03200.1	2.0e-27	48.06	NAC domain containing protein 45	[more]
AT1G65910.1	1.0e-26	44.96	NAC domain containing protein 28	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 22..179 e-value: 1.8E-34 score: 120.7
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 9..138
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 14..136 e-value: 1.1E-26 score: 94.2
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 13..173 score: 38.411263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..204
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 16..282
None	No IPR available	PANTHER	PTHR31989:SF193	NAC DOMAIN CONTAINING PROTEIN 49	coord: 16..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G009600.1	CmoCh06G009600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding