CmoCh06G008330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G008330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	vesicle-associated protein 2-1
Location	Cmo_Chr06: 4553541 .. 4556975 (+)
RNA-Seq Expression	CmoCh06G008330
Synteny	CmoCh06G008330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTCCTTTTTCGCTCTCTATTTTGGCCATCTTCCAACTCGATCCTTCTTCCGTGCCTTAATTTTCGAAACTTCCTCTGTGTTTTTTTCGATTCAATTTGGACCGAGCAATCCGTACCCTTTCTTCTCCATTCATTCCACCACAACTTTTATCGCTCTATCTCATTCATATCGCAAAATCTCCCTCATCCTTCTATTTCCTTCTCTCTGTTTTCGGGTACACCCATTCCGGGGTTCTTGGATTTCTGGATTTTTGGATTTTGTTTTTGTTTGTTTGTTGTTCTTTAATGATTGGCCGCTGGAGTGGAACTCGGTAACTGGGTTGAACTCTGTTTTTCGTTTTGTTTTTGATCTCGGTTTGTGCCGTCATGAGTGCTGGAGGTGGAAATCGCTTAATCTCCGTTCAACCGGATGAGTTGAAGTTTCAGAGTATGTAATTTTGTTTCGATGTTTCCCATTTTTTTCGTTTTAGTTTCTTATATCTTCTTGTTCTTATGTATGTTCTTGAATCTTCAGTGGTTGTTCGTTTAATTTTTGTGTTGTTTTTGCTTGGAATTGATTGATTTTGCTCATTCTTGTCATGGGAGGAGGAAAACGTTGTTATATGAGGATTAGGGTATGGATTTATGTGGGGAAATTCTGTGATTGTGAGCGTTTTTCAGGTCCTTATTGTTATCATTCCGAGGAAACTTTTCTGGAATCTGCCAAAATACTCAATAATCATGTAGCATTTCCAATTTCCTTGCATTGAGTGTTGAGATTTGAGTGTTGTAGTATGATATAGGGGACAAAGCCTCCTAGCTTCAAACCATTTTCATGGAGGTGGAGGCGTTTTCTAAGAGAGACATATGCCTCTTGTGAATGAAAAGAAGGGCTAAGCCCTGATCTAAAATTTGTGTGTCGTCTTGAGACGACCGGTTACGATAGATTGTTTGGTGGCATCATCATATTTGTGATGAACATTTTGGAGATGGTTGAATGGATCTTAAAGAAGACTGGATGCAGTTATCATGGTCCAATGTTTTGTGTTTGATCATTGACTGAATGCTTACTTTGTTGTTAAGGATGTTGTTGTAGTGTTTGGTTAATAAATAGATGAAGTTTGAAAGAAGAAGGCTAGGCAATTGTTTAGCGGTTTAGGCTCGAGTGTATCACAAAAGGGCAAGTTCCAAGTAACTCGAATACTAGGGGAGTTATCGTGTAGTTCTATTATCTTTTGAAATATCACTCTATGATATCCAATGTGTTATGACACCAACATATCGTATCGAAGAAACGATAAAGGATGTTCATTCAGTGGTTTTGTTTGTTCATGAGTGTATTCATATGACTGGTTTCCTGGTTAACATTTTTTGTGTTTTGAACTTATGAACGTCGGGCCAATATCATCAGTTGAGTTGGAAAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGCCTTTAAGGTAATAAATAGTTTGATTGTTATAATCGACCTCGACTATCGATTACCGAACGAATTTTGCATATTTTGTATTTGGTTAACTTTAAATGTATATTTCTCTATCACTCGTGCTATAGGTCAAAACGACCTCGCCCAAGAAGTACTTTGTGCGTCCCAACACGGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGGTCTTAATTGTTATAACCATTTTATTCTTATCAATTGCAATGATAAAGGAGTTTTCTGCTAACCTTACCATTATTTGGCCTCAAGTTTTCTTTTGATTTGTCGAGCTTTATCTTTATCTGTTAAAATAACGTCGAAGTTGCTCGTGGATCGACAGTGACTCTCCAAGCCCAGCGAGAGTATCCTGCAGATATGCATTGCAAAGATAAGTTTCTCTTACAAAGTACAATCGTCCCTCCAAATACTGATGTCGATGAGCTTCCGTCTGATGCTGTAAGAATTTTGACTCGGTGTTTGTTCGTTTGAATGAACATAGCATTTCATTATAATAAGCTCCATTTAAGTGTTATGATCTTATTTTCAGTTCAATAAGGAGAGTGGAAGGACAATCGAGGAATGCAAGCTTAAGGTTATCTATATGTTTCCTAATTCAGCTATGGGGAACCCAGAAGATGAAAAGAATTCTCAAAACTCCACTGTGAGTGCTCAAATTCTCCTTTTTGTCCCTTTCATATATAAATAATGCTTGTTTTGAAATGCCCTTTGTCCATGGTTGTCTGCATATTCATAAGTTGTTTGCCCTACTGATTATTTGTAGACATAAAGCCTTTATGGCTCGTAAATTTTAAACTAGTATAAATGAAACCGCTCAAGCCCACCAACAGCCAATATTGTCCTCTCTGGGCTTTCCCTTTTGGGCTTCCCCTCAGAGTTTTTAAAGCGCGTTTGCTAAGGGTGTTTCGTTCTCCTCTTCAACCGATGTGAGATCTCACGATCCACCCCCCTTTAGGACCCAGTGAGGACGCTAACACTCGTTCCTTTCTCCAATCCATGTGAGACCCCCACCAAATCCACTCCCTTTGGGGCCCAGCGTTCTCGCTGGCGCATTGCCTCATGTCTACCCCTTTGGGGCTTAGCCTCCTCTTTGCACATTGACCGGTGTCTGGCTTTGATACCATTTGTAACGGCTCAAGTCCATCGCTAGCAGATATTGTCCTCTTTGAGCTTTTCGTTTCGGGGCTTCCCCTTAAAGTTTTTAAAACGTGTCTGCTAGGGAGGGAGAGGTTTCCACACCCTTATAATAAGCCACCATAGGTTAGCTAGTGGTCAATAAGGGTCGAGGAAATGAAGTCAAACCCTGGTAATCACCTATTTAGTTATTCATATGCTATGAGTTATTTTGATAACGTAGAAGCGTGAGATGATTGTCTTGTGAGAATAGGCGAAGAAAATTAAAACGAGTATAGATTGTTGTCTCATTTACCATCTTGTGCCAAAATCAGCAGGCTGTACAACGTCTGAAGGATGAAAGAGACATGGCTATAAGGCAAACTCATCAATTACAACAAGAACTGGTGAGTTAAAGAACACCACCAACTTTGATTGAAGTTAGCATTGAGGTGTTAGTTAGTAGGTGATAGAATAATGTATACTGATACGAATAAGTGTGGAATAGGGGATGCTGAAGAGACGAAAATATCGAAAGGGGGATCCTGGGTTCTCGTTTACGTTCGCGATCTTCGTGGGGATCATCGGGATCATGGCAGGTTTCCTGTTGAATCTCACATTATCTTCACCAGGTACAGAATGAGTTTGGGGCGGGCATGTGTTTCAGATGCTGAGCAGACAATTTTTGTGGTCAATTTCATTGTATAATTTCTCTACTTCCCAAGTTTTGTATATTAGGAAACGCTGCAAATTTGTGGTCTTCATATCATACCTTCATTTTTCAAACAAATTGTTCATTTTTGTGCCTATTGAATATGAATGAATGCGTA

mRNA sequence

ACCTCCTTTTTCGCTCTCTATTTTGGCCATCTTCCAACTCGATCCTTCTTCCGTGCCTTAATTTTCGAAACTTCCTCTGTGTTTTTTTCGATTCAATTTGGACCGAGCAATCCGTACCCTTTCTTCTCCATTCATTCCACCACAACTTTTATCGCTCTATCTCATTCATATCGCAAAATCTCCCTCATCCTTCTATTTCCTTCTCTCTGTTTTCGGGTACACCCATTCCGGGGTTCTTGGATTTCTGGATTTTTGGATTTTGTTTTTGTTTGTTTGTTGTTCTTTAATGATTGGCCGCTGGAGTGGAACTCGGTAACTGGGTTGAACTCTGTTTTTCGTTTTGTTTTTGATCTCGGTTTGTGCCGTCATGAGTGCTGGAGGTGGAAATCGCTTAATCTCCGTTCAACCGGATGAGTTGAAGTTTCAGATTGAGTTGGAAAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGCCTTTAAGGTCAAAACGACCTCGCCCAAGAAGTACTTTGTGCGTCCCAACACGGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGTGACTCTCCAAGCCCAGCGAGAGTATCCTGCAGATATGCATTGCAAAGATAAGTTTCTCTTACAAAGTACAATCGTCCCTCCAAATACTGATGTCGATGAGCTTCCGTCTGATGCTTTCAATAAGGAGAGTGGAAGGACAATCGAGGAATGCAAGCTTAAGGTTATCTATATGTTTCCTAATTCAGCTATGGGGAACCCAGAAGATGAAAAGAATTCTCAAAACTCCACTGCTGTACAACGTCTGAAGGATGAAAGAGACATGGCTATAAGGCAAACTCATCAATTACAACAAGAACTGGGGATGCTGAAGAGACGAAAATATCGAAAGGGGGATCCTGGGTTCTCGTTTACGTTCGCGATCTTCGTGGGGATCATCGGGATCATGGCAGGTTTCCTGTTGAATCTCACATTATCTTCACCAGGTACAGAATGAGTTTGGGGCGGGCATGTGTTTCAGATGCTGAGCAGACAATTTTTGTGGTCAATTTCATTGTATAATTTCTCTACTTCCCAAGTTTTGTATATTAGGAAACGCTGCAAATTTGTGGTCTTCATATCATACCTTCATTTTTCAAACAAATTGTTCATTTTTGTGCCTATTGAATATGAATGAATGCGTA

Coding sequence (CDS)

ATGAGTGCTGGAGGTGGAAATCGCTTAATCTCCGTTCAACCGGATGAGTTGAAGTTTCAGATTGAGTTGGAAAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGCCTTTAAGGTCAAAACGACCTCGCCCAAGAAGTACTTTGTGCGTCCCAACACGGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGTGACTCTCCAAGCCCAGCGAGAGTATCCTGCAGATATGCATTGCAAAGATAAGTTTCTCTTACAAAGTACAATCGTCCCTCCAAATACTGATGTCGATGAGCTTCCGTCTGATGCTTTCAATAAGGAGAGTGGAAGGACAATCGAGGAATGCAAGCTTAAGGTTATCTATATGTTTCCTAATTCAGCTATGGGGAACCCAGAAGATGAAAAGAATTCTCAAAACTCCACTGCTGTACAACGTCTGAAGGATGAAAGAGACATGGCTATAAGGCAAACTCATCAATTACAACAAGAACTGGGGATGCTGAAGAGACGAAAATATCGAAAGGGGGATCCTGGGTTCTCGTTTACGTTCGCGATCTTCGTGGGGATCATCGGGATCATGGCAGGTTTCCTGTTGAATCTCACATTATCTTCACCAGGTACAGAATGA

Protein sequence

MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIEECKLKVIYMFPNSAMGNPEDEKNSQNSTAVQRLKDERDMAIRQTHQLQQELGMLKRRKYRKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE

Homology

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BLAST of CmoCh06G008330 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.9e-76
Identity = 141/219 (64.38%), Postives = 172/219 (78.54%), Query Frame = 0


Query: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60
           M+  G N+LIS+QPDELKF  ELEKQS+CDLKVAN TE++VAFKVKTTSPKKYFVRPNTG
Sbjct: 1   MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120
           V+QPWDSCIIRVTLQAQREYP DM CKDKFLLQSTIVPP+TDVDELP D F K+SG+T+ 
Sbjct: 61  VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120

Query: 121 ECKLKVIYMFPNSAMGNPE------DEKNSQNSTAVQRLKDERDMAIRQTHQLQQELGML 180
           ECKLKV Y+ P++   + E      D ++S+  + +QRLK+ERD A++QT QLQ EL  +
Sbjct: 121 ECKLKVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETV 180

Query: 181 KRRK-YRKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSP 213
           +RR+  R    G S   A  VG+IG++ GF+L LTL+SP
Sbjct: 181 RRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASP 219

[Close]

BLAST of CmoCh06G008330 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.5e-41
Identity = 93/232 (40.09%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 9   LISVQPDELKFQIELEKQSFCDLKVANNTEHH-VAFKVKTTSPKKYFVRPNTGVVQPWDS 68
           L+++ P ELKF  EL+KQS C +++ N T    VAFKVKTT+P+KY VRPNTGVV P DS
Sbjct: 6   LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65

Query: 69  CIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIEECKLKVI 128
           C + VT+QAQ+E P DM CKDKFL+Q+ +V   T   E+ ++ FNKE+GR IE+ KL+V+
Sbjct: 66  CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVV 125

Query: 129 YMFPNSAMGNPE---------------------------------DEKNSQNSTAVQRLK 188
           Y+  N     PE                                  EK+S+  + + +L 
Sbjct: 126 YIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLT 185

Query: 189 DERDMAIRQTHQLQQELGMLKRRKYRKGDPGFSFTFAIFVGIIGIMAGFLLN 207
           +E+  A +Q+ +L+ EL ML++   +K   G S    + VG++G + G+LLN
Sbjct: 186 EEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLN 237

[Close]

BLAST of CmoCh06G008330 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-40
Identity = 89/237 (37.55%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 7   NRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
           N L+++ P +L+F  EL+KQ  C L + N T+++VAFKVKTT+PKKY VRPNTGVV P  
Sbjct: 3   NELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRS 62

Query: 67  SCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIEECKLKV 126
           S  + VT+QAQ+E PAD+ CKDKFLLQ  +  P     ++  + F+KE+G  +EE KL+V
Sbjct: 63  SSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRV 122

Query: 127 IYMFP--------------NSAMGNPEDEKNSQNSTA---------------------VQ 186
           +Y+ P              +S   +  D  N+ + TA                     V 
Sbjct: 123 VYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALVT 182

Query: 187 RLKDERDMAIRQTHQLQQELGMLKRRKYRKGDPGFSFTFAIFVGIIGIMAGFLLNLT 209
           +L +E++ A++  ++LQQEL  L+R   R    G  F + + VG+IG++ G+++  T
Sbjct: 183 KLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of CmoCh06G008330 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.0e-39
Identity = 88/237 (37.13%), Postives = 133/237 (56.12%), Query Frame = 0


Query: 7   NRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
           + L++V+P +L+F  EL+KQ  C L + N T+++VAFKVKTT+PKKY VRPNTGVV P  
Sbjct: 20  SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79

Query: 67  SCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIEECKLKV 126
           +C + VT+QAQ+E P+DM CKDKFLLQ  I  P     E+  + F+KE+G  +EE KL+V
Sbjct: 80  TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRV 139

Query: 127 IYMFP--------------NSAMGNPED---------------------EKNSQNSTAVQ 186
            Y+ P              +S   +  D                     E  S+    + 
Sbjct: 140 TYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALIT 199

Query: 187 RLKDERDMAIRQTHQLQQELGMLKRRKYRKGDPGFSFTFAIFVGIIGIMAGFLLNLT 209
           +L +E+  AI+  ++LQ+EL  L+R   +    G  F + + VG+IG++ G+++  T
Sbjct: 200 KLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMKRT 256

[Close]

BLAST of CmoCh06G008330 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.4e-30
Identity = 60/125 (48.00%), Postives = 85/125 (68.00%), Query Frame = 0


Query: 7   NRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
           + L+ + P +++F IEL K+  C L + N TE++VAFK KTT+ KKY+VRPN GVV P  
Sbjct: 174 DELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRS 233

Query: 67  SCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIEECKLKV 126
           SC + V +QA +E PADM C+DK L Q  +V P T   ++ S+ F+KE+G   EE +LKV
Sbjct: 234 SCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKV 293

Query: 127 IYMFP 132
           +Y+ P
Sbjct: 294 MYVTP 298

[Close]

BLAST of CmoCh06G008330 vs. ExPASy TrEMBL
Match: A0A6J1FK97 (vesicle-associated protein 2-1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444982 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.2e-119
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60
           MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120
           VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120

Query: 121 ECKLKVIYMFPNSAMGNPEDEKNSQNSTAVQRLKDERDMAIRQTHQLQQELGMLKRRKYR 180
           ECKLKVIYMFPNSAMGNPEDEKNSQNSTAVQRLKDERDMAIRQTHQLQQELGMLKRRKYR
Sbjct: 121 ECKLKVIYMFPNSAMGNPEDEKNSQNSTAVQRLKDERDMAIRQTHQLQQELGMLKRRKYR 180

Query: 181 KGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216
           KGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE
Sbjct: 181 KGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 215

[Close]

BLAST of CmoCh06G008330 vs. ExPASy TrEMBL
Match: A0A6J1KXP3 (vesicle-associated protein 2-1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498499 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.5e-118
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60
           MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120
           VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120

Query: 121 ECKLKVIYMFPNSAMGNPEDEKNSQNSTAVQRLKDERDMAIRQTHQLQQELGMLKRRKYR 180
           ECKLKVIYMFPNSAMGNPEDEKNSQNSTAVQRLKDERD+AIRQTHQLQQELGMLKRRKYR
Sbjct: 121 ECKLKVIYMFPNSAMGNPEDEKNSQNSTAVQRLKDERDIAIRQTHQLQQELGMLKRRKYR 180

Query: 181 KGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216
           KGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE
Sbjct: 181 KGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 215

[Close]

BLAST of CmoCh06G008330 vs. ExPASy TrEMBL
Match: A0A6J1FL57 (vesicle-associated protein 2-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444982 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.3e-117
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60
           MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120
           VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120

Query: 121 ECKLKVIYMFPNSAMGNPEDEKNSQNST-AVQRLKDERDMAIRQTHQLQQELGMLKRRKY 180
           ECKLKVIYMFPNSAMGNPEDEKNSQNST AVQRLKDERDMAIRQTHQLQQELGMLKRRKY
Sbjct: 121 ECKLKVIYMFPNSAMGNPEDEKNSQNSTQAVQRLKDERDMAIRQTHQLQQELGMLKRRKY 180

Query: 181 RKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216
           RKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE
Sbjct: 181 RKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216

[Close]

BLAST of CmoCh06G008330 vs. ExPASy TrEMBL
Match: A0A6J1KZI8 (vesicle-associated protein 2-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498499 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.7e-117
Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60
           MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120
           VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120

Query: 121 ECKLKVIYMFPNSAMGNPEDEKNSQNST-AVQRLKDERDMAIRQTHQLQQELGMLKRRKY 180
           ECKLKVIYMFPNSAMGNPEDEKNSQNST AVQRLKDERD+AIRQTHQLQQELGMLKRRKY
Sbjct: 121 ECKLKVIYMFPNSAMGNPEDEKNSQNSTQAVQRLKDERDIAIRQTHQLQQELGMLKRRKY 180

Query: 181 RKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216
           RKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE
Sbjct: 181 RKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216

[Close]

BLAST of CmoCh06G008330 vs. ExPASy TrEMBL
Match: A0A5A7TC60 (Vesicle-associated protein 2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00770 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.2e-108
Identity = 198/216 (91.67%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60
           MSAGGGNRLISVQPDELKFQIEL+KQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120
           VVQPWDSCIIRVTLQA REYPADM CKDKFLLQSTIVPPNTDVDELPSDAFNK+SGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAMREYPADMQCKDKFLLQSTIVPPNTDVDELPSDAFNKDSGRTIE 120

Query: 121 ECKLKVIYMFPNSAMGNPEDEKN-SQNSTAVQRLKDERDMAIRQTHQLQQELGMLKRRKY 180
           ECKLKVIY+ P SA+GN EDEKN SQ+S+AV RLK+ERDMAIRQTHQLQQEL M+KRRKY
Sbjct: 121 ECKLKVIYISPTSALGNSEDEKNLSQSSSAVHRLKEERDMAIRQTHQLQQELDMMKRRKY 180

Query: 181 RKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216
           RKGDPGFSFTFAIFVGI+GIMAGFLLNLTLSSP TE
Sbjct: 181 RKGDPGFSFTFAIFVGIVGIMAGFLLNLTLSSPSTE 216

[Close]

BLAST of CmoCh06G008330 vs. TAIR 10
Match: AT5G47180.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 285.0 bits (728), Expect = 4.9e-77
Identity = 141/219 (64.38%), Postives = 172/219 (78.54%), Query Frame = 0


Query: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60
           M+  G N+LIS+QPDELKF  ELEKQS+CDLKVAN TE++VAFKVKTTSPKKYFVRPNTG
Sbjct: 1   MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120
           V+QPWDSCIIRVTLQAQREYP DM CKDKFLLQSTIVPP+TDVDELP D F K+SG+T+ 
Sbjct: 61  VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120

Query: 121 ECKLKVIYMFPNSAMGNPE------DEKNSQNSTAVQRLKDERDMAIRQTHQLQQELGML 180
           ECKLKV Y+ P++   + E      D ++S+  + +QRLK+ERD A++QT QLQ EL  +
Sbjct: 121 ECKLKVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETV 180

Query: 181 KRRK-YRKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSP 213
           +RR+  R    G S   A  VG+IG++ GF+L LTL+SP
Sbjct: 181 RRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASP 219

[Close]

BLAST of CmoCh06G008330 vs. TAIR 10
Match: AT5G47180.2 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 285.0 bits (728), Expect = 4.9e-77
Identity = 141/219 (64.38%), Postives = 172/219 (78.54%), Query Frame = 0


Query: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60
           M+  G N+LIS+QPDELKF  ELEKQS+CDLKVAN TE++VAFKVKTTSPKKYFVRPNTG
Sbjct: 1   MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120
           V+QPWDSCIIRVTLQAQREYP DM CKDKFLLQSTIVPP+TDVDELP D F K+SG+T+ 
Sbjct: 61  VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120

Query: 121 ECKLKVIYMFPNSAMGNPE------DEKNSQNSTAVQRLKDERDMAIRQTHQLQQELGML 180
           ECKLKV Y+ P++   + E      D ++S+  + +QRLK+ERD A++QT QLQ EL  +
Sbjct: 121 ECKLKVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETV 180

Query: 181 KRRK-YRKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSP 213
           +RR+  R    G S   A  VG+IG++ GF+L LTL+SP
Sbjct: 181 RRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASP 219

[Close]

BLAST of CmoCh06G008330 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42
Identity = 93/232 (40.09%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 9   LISVQPDELKFQIELEKQSFCDLKVANNTEHH-VAFKVKTTSPKKYFVRPNTGVVQPWDS 68
           L+++ P ELKF  EL+KQS C +++ N T    VAFKVKTT+P+KY VRPNTGVV P DS
Sbjct: 6   LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65

Query: 69  CIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIEECKLKVI 128
           C + VT+QAQ+E P DM CKDKFL+Q+ +V   T   E+ ++ FNKE+GR IE+ KL+V+
Sbjct: 66  CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVV 125

Query: 129 YMFPNSAMGNPE---------------------------------DEKNSQNSTAVQRLK 188
           Y+  N     PE                                  EK+S+  + + +L 
Sbjct: 126 YIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLT 185

Query: 189 DERDMAIRQTHQLQQELGMLKRRKYRKGDPGFSFTFAIFVGIIGIMAGFLLN 207
           +E+  A +Q+ +L+ EL ML++   +K   G S    + VG++G + G+LLN
Sbjct: 186 EEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLN 237

[Close]

BLAST of CmoCh06G008330 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 )

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-41
Identity = 89/237 (37.55%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 7   NRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
           N L+++ P +L+F  EL+KQ  C L + N T+++VAFKVKTT+PKKY VRPNTGVV P  
Sbjct: 3   NELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRS 62

Query: 67  SCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIEECKLKV 126
           S  + VT+QAQ+E PAD+ CKDKFLLQ  +  P     ++  + F+KE+G  +EE KL+V
Sbjct: 63  SSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRV 122

Query: 127 IYMFP--------------NSAMGNPEDEKNSQNSTA---------------------VQ 186
           +Y+ P              +S   +  D  N+ + TA                     V 
Sbjct: 123 VYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALVT 182

Query: 187 RLKDERDMAIRQTHQLQQELGMLKRRKYRKGDPGFSFTFAIFVGIIGIMAGFLLNLT 209
           +L +E++ A++  ++LQQEL  L+R   R    G  F + + VG+IG++ G+++  T
Sbjct: 183 KLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of CmoCh06G008330 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-40
Identity = 88/237 (37.13%), Postives = 133/237 (56.12%), Query Frame = 0


Query: 7   NRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
           + L++V+P +L+F  EL+KQ  C L + N T+++VAFKVKTT+PKKY VRPNTGVV P  
Sbjct: 20  SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79

Query: 67  SCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIEECKLKV 126
           +C + VT+QAQ+E P+DM CKDKFLLQ  I  P     E+  + F+KE+G  +EE KL+V
Sbjct: 80  TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRV 139

Query: 127 IYMFP--------------NSAMGNPED---------------------EKNSQNSTAVQ 186
            Y+ P              +S   +  D                     E  S+    + 
Sbjct: 140 TYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALIT 199

Query: 187 RLKDERDMAIRQTHQLQQELGMLKRRKYRKGDPGFSFTFAIFVGIIGIMAGFLLNLT 209
           +L +E+  AI+  ++LQ+EL  L+R   +    G  F + + VG+IG++ G+++  T
Sbjct: 200 KLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMKRT 256

The following BLAST results are available for this feature:

BLAST of CmoCh06G008330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVU1	6.9e-76	64.38	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=...	[more]
Q84WW5	5.5e-41	40.09	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q9SHC8	2.1e-40	37.55	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q8VZ95	3.0e-39	37.13	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]
Q9SYC9	4.4e-30	48.00	Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=...	[more]

BLAST of CmoCh06G008330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FK97	5.2e-119	100.00	vesicle-associated protein 2-1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KXP3	1.5e-118	99.53	vesicle-associated protein 2-1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FL57	1.3e-117	99.54	vesicle-associated protein 2-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KZI8	3.7e-117	99.07	vesicle-associated protein 2-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7TC60	4.2e-108	91.67	Vesicle-associated protein 2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of CmoCh06G008330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47180.1	4.9e-77	64.38	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT5G47180.2	4.9e-77	64.38	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT4G00170.1	3.9e-42	40.09	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT2G45140.1	1.5e-41	37.55	plant VAP homolog 12	[more]
AT3G60600.1	2.1e-40	37.13	vesicle associated protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..170
None	No IPR available	PANTHER	PTHR10809:SF42	VESICLE-ASSOCIATED PROTEIN 2-1	coord: 5..212
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 5..133 e-value: 5.7E-42 score: 144.6
IPR000535	Major sperm protein (MSP) domain	PFAM	PF00635	Motile_Sperm	coord: 10..114 e-value: 1.9E-29 score: 101.7
IPR000535	Major sperm protein (MSP) domain	PROSITE	PS50202	MSP	coord: 9..129 score: 29.771551
IPR016763	Vesicle-associated membrane-protein-associated protein	PIRSF	PIRSF019693	VAMP_assoc_prot	coord: 132..207 e-value: 2.7E-4 score: 19.1 coord: 2..158 e-value: 1.8E-52 score: 177.0
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 5..212
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 5..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G008330.1	CmoCh06G008330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane